Multiple sequence alignment - TraesCS2A01G126100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G126100 chr2A 100.000 2372 0 0 1 2372 74563110 74560739 0.000000e+00 4381.0
1 TraesCS2A01G126100 chr2A 95.161 248 12 0 2125 2372 139973611 139973364 2.210000e-105 392.0
2 TraesCS2A01G126100 chr2A 95.161 248 12 0 2125 2372 543580494 543580247 2.210000e-105 392.0
3 TraesCS2A01G126100 chr2A 85.612 139 17 2 1594 1731 74553931 74553795 2.460000e-30 143.0
4 TraesCS2A01G126100 chr2A 81.651 109 11 7 1331 1431 74554280 74554173 5.430000e-12 82.4
5 TraesCS2A01G126100 chr2D 86.115 1318 103 49 672 1939 74986867 74985580 0.000000e+00 1347.0
6 TraesCS2A01G126100 chr2B 87.150 1035 74 32 806 1801 114431273 114430259 0.000000e+00 1120.0
7 TraesCS2A01G126100 chr2B 79.443 287 44 9 1806 2087 114430179 114429903 3.110000e-44 189.0
8 TraesCS2A01G126100 chr7A 95.565 248 11 0 2125 2372 562214858 562214611 4.750000e-107 398.0
9 TraesCS2A01G126100 chr6A 95.161 248 12 0 2125 2372 266089908 266090155 2.210000e-105 392.0
10 TraesCS2A01G126100 chr6A 95.161 248 12 0 2125 2372 604262529 604262282 2.210000e-105 392.0
11 TraesCS2A01G126100 chr3A 95.161 248 12 0 2125 2372 557654921 557654674 2.210000e-105 392.0
12 TraesCS2A01G126100 chr3A 94.800 250 13 0 2123 2372 716108700 716108949 7.950000e-105 390.0
13 TraesCS2A01G126100 chr5A 94.800 250 12 1 2120 2369 531288026 531288274 2.860000e-104 388.0
14 TraesCS2A01G126100 chr4A 94.444 252 14 0 2121 2372 627942363 627942112 2.860000e-104 388.0
15 TraesCS2A01G126100 chr4A 82.597 385 55 6 996 1380 558676372 558676000 1.760000e-86 329.0
16 TraesCS2A01G126100 chr4D 83.905 379 49 6 996 1374 40824442 40824808 3.750000e-93 351.0
17 TraesCS2A01G126100 chr4D 86.081 273 32 2 1100 1366 10999991 10999719 2.980000e-74 289.0
18 TraesCS2A01G126100 chr4B 86.000 300 39 1 1075 1374 59866384 59866680 3.800000e-83 318.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G126100 chr2A 74560739 74563110 2371 True 4381.0 4381 100.0000 1 2372 1 chr2A.!!$R1 2371
1 TraesCS2A01G126100 chr2D 74985580 74986867 1287 True 1347.0 1347 86.1150 672 1939 1 chr2D.!!$R1 1267
2 TraesCS2A01G126100 chr2B 114429903 114431273 1370 True 654.5 1120 83.2965 806 2087 2 chr2B.!!$R1 1281

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
534 535 0.036765 TACTCCGCACGCCTCATTTT 60.037 50.0 0.0 0.0 0.0 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2350 2511 0.031314 CTCATCCTCGACGACATGGG 59.969 60.0 10.68 5.23 0.0 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 8.780846 TTCTTCTCCTTTTTGCGTATTATACA 57.219 30.769 3.16 0.00 0.00 2.29
54 55 8.420374 TCTTCTCCTTTTTGCGTATTATACAG 57.580 34.615 3.16 0.00 0.00 2.74
55 56 8.255206 TCTTCTCCTTTTTGCGTATTATACAGA 58.745 33.333 3.16 0.00 0.00 3.41
56 57 8.780846 TTCTCCTTTTTGCGTATTATACAGAA 57.219 30.769 3.16 0.00 0.00 3.02
57 58 8.780846 TCTCCTTTTTGCGTATTATACAGAAA 57.219 30.769 3.16 0.00 0.00 2.52
58 59 8.879759 TCTCCTTTTTGCGTATTATACAGAAAG 58.120 33.333 3.16 6.51 0.00 2.62
59 60 8.556213 TCCTTTTTGCGTATTATACAGAAAGT 57.444 30.769 3.16 0.00 0.00 2.66
60 61 9.005777 TCCTTTTTGCGTATTATACAGAAAGTT 57.994 29.630 3.16 0.00 0.00 2.66
61 62 9.274065 CCTTTTTGCGTATTATACAGAAAGTTC 57.726 33.333 3.16 0.00 0.00 3.01
62 63 9.820229 CTTTTTGCGTATTATACAGAAAGTTCA 57.180 29.630 3.16 0.00 0.00 3.18
65 66 9.767684 TTTGCGTATTATACAGAAAGTTCATTG 57.232 29.630 3.16 0.00 0.00 2.82
66 67 8.487313 TGCGTATTATACAGAAAGTTCATTGT 57.513 30.769 3.16 0.00 0.00 2.71
67 68 8.387354 TGCGTATTATACAGAAAGTTCATTGTG 58.613 33.333 3.16 0.00 0.00 3.33
68 69 8.388103 GCGTATTATACAGAAAGTTCATTGTGT 58.612 33.333 3.16 0.00 39.73 3.72
127 128 9.018582 TGTTCACCATATGTCAATAAATGTTCA 57.981 29.630 1.24 0.00 0.00 3.18
128 129 9.853555 GTTCACCATATGTCAATAAATGTTCAA 57.146 29.630 1.24 0.00 0.00 2.69
129 130 9.853555 TTCACCATATGTCAATAAATGTTCAAC 57.146 29.630 1.24 0.00 0.00 3.18
130 131 9.241919 TCACCATATGTCAATAAATGTTCAACT 57.758 29.630 1.24 0.00 0.00 3.16
131 132 9.859427 CACCATATGTCAATAAATGTTCAACTT 57.141 29.630 1.24 0.00 0.00 2.66
169 170 9.891828 TGTTCATTATGTATGTGAAAGTTGTTC 57.108 29.630 0.00 0.00 34.04 3.18
170 171 9.051027 GTTCATTATGTATGTGAAAGTTGTTCG 57.949 33.333 0.00 0.00 34.04 3.95
171 172 7.747888 TCATTATGTATGTGAAAGTTGTTCGG 58.252 34.615 0.00 0.00 35.64 4.30
172 173 7.389330 TCATTATGTATGTGAAAGTTGTTCGGT 59.611 33.333 0.00 0.00 35.64 4.69
173 174 4.804608 TGTATGTGAAAGTTGTTCGGTG 57.195 40.909 0.00 0.00 0.00 4.94
174 175 4.193090 TGTATGTGAAAGTTGTTCGGTGT 58.807 39.130 0.00 0.00 0.00 4.16
175 176 5.358090 TGTATGTGAAAGTTGTTCGGTGTA 58.642 37.500 0.00 0.00 0.00 2.90
176 177 5.992829 TGTATGTGAAAGTTGTTCGGTGTAT 59.007 36.000 0.00 0.00 0.00 2.29
177 178 7.153315 TGTATGTGAAAGTTGTTCGGTGTATA 58.847 34.615 0.00 0.00 0.00 1.47
178 179 7.820386 TGTATGTGAAAGTTGTTCGGTGTATAT 59.180 33.333 0.00 0.00 0.00 0.86
179 180 7.681939 ATGTGAAAGTTGTTCGGTGTATATT 57.318 32.000 0.00 0.00 0.00 1.28
180 181 8.780846 ATGTGAAAGTTGTTCGGTGTATATTA 57.219 30.769 0.00 0.00 0.00 0.98
181 182 8.020861 TGTGAAAGTTGTTCGGTGTATATTAC 57.979 34.615 0.00 0.00 0.00 1.89
182 183 7.656542 TGTGAAAGTTGTTCGGTGTATATTACA 59.343 33.333 0.00 0.00 36.08 2.41
183 184 8.497554 GTGAAAGTTGTTCGGTGTATATTACAA 58.502 33.333 0.00 0.00 40.93 2.41
184 185 9.053840 TGAAAGTTGTTCGGTGTATATTACAAA 57.946 29.630 0.00 0.00 40.93 2.83
185 186 9.881529 GAAAGTTGTTCGGTGTATATTACAAAA 57.118 29.630 0.00 0.00 40.93 2.44
246 247 9.617523 AAATCACATTTTCTCCAAATTTGTTCT 57.382 25.926 16.73 0.00 35.06 3.01
247 248 8.822652 ATCACATTTTCTCCAAATTTGTTCTC 57.177 30.769 16.73 0.00 35.06 2.87
248 249 6.917477 TCACATTTTCTCCAAATTTGTTCTCG 59.083 34.615 16.73 1.52 35.06 4.04
249 250 5.691754 ACATTTTCTCCAAATTTGTTCTCGC 59.308 36.000 16.73 0.00 32.24 5.03
250 251 5.514274 TTTTCTCCAAATTTGTTCTCGCT 57.486 34.783 16.73 0.00 0.00 4.93
251 252 5.514274 TTTCTCCAAATTTGTTCTCGCTT 57.486 34.783 16.73 0.00 0.00 4.68
252 253 5.514274 TTCTCCAAATTTGTTCTCGCTTT 57.486 34.783 16.73 0.00 0.00 3.51
253 254 6.627395 TTCTCCAAATTTGTTCTCGCTTTA 57.373 33.333 16.73 0.00 0.00 1.85
254 255 6.627395 TCTCCAAATTTGTTCTCGCTTTAA 57.373 33.333 16.73 0.00 0.00 1.52
255 256 7.033530 TCTCCAAATTTGTTCTCGCTTTAAA 57.966 32.000 16.73 0.00 0.00 1.52
256 257 7.657336 TCTCCAAATTTGTTCTCGCTTTAAAT 58.343 30.769 16.73 0.00 0.00 1.40
257 258 7.594758 TCTCCAAATTTGTTCTCGCTTTAAATG 59.405 33.333 16.73 0.00 0.00 2.32
258 259 7.206687 TCCAAATTTGTTCTCGCTTTAAATGT 58.793 30.769 16.73 0.00 0.00 2.71
259 260 7.708752 TCCAAATTTGTTCTCGCTTTAAATGTT 59.291 29.630 16.73 0.00 0.00 2.71
260 261 8.334632 CCAAATTTGTTCTCGCTTTAAATGTTT 58.665 29.630 16.73 0.00 0.00 2.83
261 262 9.701355 CAAATTTGTTCTCGCTTTAAATGTTTT 57.299 25.926 10.15 0.00 0.00 2.43
291 292 9.820725 AGAATTTGAAATCTGTTCACATTTTCA 57.179 25.926 11.40 11.40 36.73 2.69
295 296 8.768957 TTGAAATCTGTTCACATTTTCAAACA 57.231 26.923 18.98 6.46 40.64 2.83
296 297 8.945481 TGAAATCTGTTCACATTTTCAAACAT 57.055 26.923 12.41 0.00 36.16 2.71
297 298 9.381033 TGAAATCTGTTCACATTTTCAAACATT 57.619 25.926 12.41 0.00 36.16 2.71
338 339 9.971922 AGAAATTTTTGTCATAGTTTCTCCAAG 57.028 29.630 0.00 0.00 32.23 3.61
339 340 9.965824 GAAATTTTTGTCATAGTTTCTCCAAGA 57.034 29.630 0.00 0.00 0.00 3.02
343 344 9.748708 TTTTTGTCATAGTTTCTCCAAGAAATG 57.251 29.630 5.50 1.38 44.94 2.32
344 345 8.463930 TTTGTCATAGTTTCTCCAAGAAATGT 57.536 30.769 5.50 0.38 44.94 2.71
345 346 8.463930 TTGTCATAGTTTCTCCAAGAAATGTT 57.536 30.769 5.50 0.00 44.94 2.71
346 347 7.874940 TGTCATAGTTTCTCCAAGAAATGTTG 58.125 34.615 5.50 4.50 44.94 3.33
347 348 7.719193 TGTCATAGTTTCTCCAAGAAATGTTGA 59.281 33.333 5.50 6.33 44.94 3.18
348 349 8.567948 GTCATAGTTTCTCCAAGAAATGTTGAA 58.432 33.333 5.50 0.00 44.94 2.69
349 350 9.130661 TCATAGTTTCTCCAAGAAATGTTGAAA 57.869 29.630 5.50 0.00 44.94 2.69
350 351 9.918630 CATAGTTTCTCCAAGAAATGTTGAAAT 57.081 29.630 5.50 0.00 44.94 2.17
353 354 9.671279 AGTTTCTCCAAGAAATGTTGAAATTTT 57.329 25.926 5.50 0.00 44.94 1.82
356 357 9.664332 TTCTCCAAGAAATGTTGAAATTTTTGA 57.336 25.926 0.00 0.00 29.99 2.69
357 358 9.316730 TCTCCAAGAAATGTTGAAATTTTTGAG 57.683 29.630 0.00 0.00 29.89 3.02
358 359 9.316730 CTCCAAGAAATGTTGAAATTTTTGAGA 57.683 29.630 0.00 0.00 29.89 3.27
359 360 9.664332 TCCAAGAAATGTTGAAATTTTTGAGAA 57.336 25.926 0.00 0.00 29.89 2.87
367 368 8.925788 TGTTGAAATTTTTGAGAAAAACAACG 57.074 26.923 14.88 0.00 42.57 4.10
368 369 8.012241 TGTTGAAATTTTTGAGAAAAACAACGG 58.988 29.630 14.88 0.00 42.57 4.44
369 370 7.891183 TGAAATTTTTGAGAAAAACAACGGA 57.109 28.000 0.00 0.00 42.57 4.69
370 371 8.485976 TGAAATTTTTGAGAAAAACAACGGAT 57.514 26.923 0.00 0.00 42.57 4.18
371 372 8.599774 TGAAATTTTTGAGAAAAACAACGGATC 58.400 29.630 0.00 0.00 42.57 3.36
372 373 8.716646 AAATTTTTGAGAAAAACAACGGATCT 57.283 26.923 0.00 0.00 42.57 2.75
373 374 7.698836 ATTTTTGAGAAAAACAACGGATCTG 57.301 32.000 0.00 0.00 42.57 2.90
374 375 3.896648 TGAGAAAAACAACGGATCTGC 57.103 42.857 0.00 0.00 0.00 4.26
375 376 2.552315 TGAGAAAAACAACGGATCTGCC 59.448 45.455 0.00 0.00 0.00 4.85
376 377 2.552315 GAGAAAAACAACGGATCTGCCA 59.448 45.455 0.00 0.00 35.94 4.92
377 378 2.293399 AGAAAAACAACGGATCTGCCAC 59.707 45.455 0.00 0.00 35.94 5.01
378 379 1.981256 AAAACAACGGATCTGCCACT 58.019 45.000 0.00 0.00 35.94 4.00
379 380 1.238439 AAACAACGGATCTGCCACTG 58.762 50.000 0.00 0.00 35.94 3.66
380 381 0.108585 AACAACGGATCTGCCACTGT 59.891 50.000 0.00 0.00 35.94 3.55
381 382 0.973632 ACAACGGATCTGCCACTGTA 59.026 50.000 0.00 0.00 35.94 2.74
382 383 1.346395 ACAACGGATCTGCCACTGTAA 59.654 47.619 0.00 0.00 35.94 2.41
383 384 2.224426 ACAACGGATCTGCCACTGTAAA 60.224 45.455 0.00 0.00 35.94 2.01
384 385 2.811431 CAACGGATCTGCCACTGTAAAA 59.189 45.455 0.00 0.00 35.94 1.52
385 386 3.134574 ACGGATCTGCCACTGTAAAAA 57.865 42.857 0.00 0.00 35.94 1.94
386 387 3.686016 ACGGATCTGCCACTGTAAAAAT 58.314 40.909 0.00 0.00 35.94 1.82
387 388 4.079253 ACGGATCTGCCACTGTAAAAATT 58.921 39.130 0.00 0.00 35.94 1.82
388 389 4.522789 ACGGATCTGCCACTGTAAAAATTT 59.477 37.500 0.00 0.00 35.94 1.82
389 390 5.010617 ACGGATCTGCCACTGTAAAAATTTT 59.989 36.000 0.00 0.00 35.94 1.82
390 391 5.925969 CGGATCTGCCACTGTAAAAATTTTT 59.074 36.000 19.44 19.44 35.94 1.94
391 392 7.087639 CGGATCTGCCACTGTAAAAATTTTTA 58.912 34.615 17.45 17.45 35.94 1.52
392 393 7.273381 CGGATCTGCCACTGTAAAAATTTTTAG 59.727 37.037 20.94 15.44 32.97 1.85
393 394 8.303876 GGATCTGCCACTGTAAAAATTTTTAGA 58.696 33.333 20.94 18.80 33.34 2.10
394 395 9.691362 GATCTGCCACTGTAAAAATTTTTAGAA 57.309 29.630 20.94 12.77 33.66 2.10
395 396 8.865590 TCTGCCACTGTAAAAATTTTTAGAAC 57.134 30.769 20.94 13.97 33.66 3.01
396 397 8.470805 TCTGCCACTGTAAAAATTTTTAGAACA 58.529 29.630 20.94 17.18 33.66 3.18
397 398 9.092876 CTGCCACTGTAAAAATTTTTAGAACAA 57.907 29.630 20.94 0.97 33.66 2.83
398 399 9.606631 TGCCACTGTAAAAATTTTTAGAACAAT 57.393 25.926 20.94 8.12 33.66 2.71
412 413 9.959721 TTTTTAGAACAATCTGCCTCTATAACT 57.040 29.630 0.00 0.00 37.10 2.24
415 416 7.906199 AGAACAATCTGCCTCTATAACTACT 57.094 36.000 0.00 0.00 33.59 2.57
416 417 8.998277 AGAACAATCTGCCTCTATAACTACTA 57.002 34.615 0.00 0.00 33.59 1.82
417 418 8.852135 AGAACAATCTGCCTCTATAACTACTAC 58.148 37.037 0.00 0.00 33.59 2.73
418 419 8.770010 AACAATCTGCCTCTATAACTACTACT 57.230 34.615 0.00 0.00 0.00 2.57
419 420 8.770010 ACAATCTGCCTCTATAACTACTACTT 57.230 34.615 0.00 0.00 0.00 2.24
420 421 9.863650 ACAATCTGCCTCTATAACTACTACTTA 57.136 33.333 0.00 0.00 0.00 2.24
434 435 7.001695 ACTACTACTTAAAATTTAGCGCTGC 57.998 36.000 22.90 0.00 0.00 5.25
435 436 4.893795 ACTACTTAAAATTTAGCGCTGCG 58.106 39.130 22.90 19.17 0.00 5.18
436 437 3.824414 ACTTAAAATTTAGCGCTGCGT 57.176 38.095 22.90 12.62 0.00 5.24
437 438 4.155310 ACTTAAAATTTAGCGCTGCGTT 57.845 36.364 22.90 20.49 0.00 4.84
438 439 4.542735 ACTTAAAATTTAGCGCTGCGTTT 58.457 34.783 22.90 16.39 0.00 3.60
439 440 4.979815 ACTTAAAATTTAGCGCTGCGTTTT 59.020 33.333 22.90 22.80 0.00 2.43
440 441 6.144175 ACTTAAAATTTAGCGCTGCGTTTTA 58.856 32.000 22.90 21.86 0.00 1.52
441 442 4.879014 AAAATTTAGCGCTGCGTTTTAC 57.121 36.364 22.90 6.19 0.00 2.01
442 443 2.537639 ATTTAGCGCTGCGTTTTACC 57.462 45.000 22.90 5.41 0.00 2.85
443 444 1.227639 TTTAGCGCTGCGTTTTACCA 58.772 45.000 22.90 0.00 0.00 3.25
444 445 0.513820 TTAGCGCTGCGTTTTACCAC 59.486 50.000 22.90 3.85 0.00 4.16
445 446 1.619526 TAGCGCTGCGTTTTACCACG 61.620 55.000 22.90 0.00 43.36 4.94
446 447 2.172419 CGCTGCGTTTTACCACGG 59.828 61.111 14.93 0.00 40.69 4.94
447 448 2.127003 GCTGCGTTTTACCACGGC 60.127 61.111 0.00 0.00 40.69 5.68
448 449 2.899044 GCTGCGTTTTACCACGGCA 61.899 57.895 0.00 0.00 40.69 5.69
449 450 1.206578 CTGCGTTTTACCACGGCAG 59.793 57.895 0.00 0.00 40.69 4.85
450 451 1.225376 CTGCGTTTTACCACGGCAGA 61.225 55.000 5.45 0.00 42.17 4.26
451 452 1.205820 GCGTTTTACCACGGCAGAC 59.794 57.895 0.00 0.00 40.69 3.51
452 453 1.226030 GCGTTTTACCACGGCAGACT 61.226 55.000 0.00 0.00 40.69 3.24
453 454 1.223187 CGTTTTACCACGGCAGACTT 58.777 50.000 0.00 0.00 36.47 3.01
454 455 1.070175 CGTTTTACCACGGCAGACTTG 60.070 52.381 0.00 0.00 36.47 3.16
464 465 2.659740 GCAGACTTGCTAGCTCGAC 58.340 57.895 17.23 7.19 46.95 4.20
465 466 0.172352 GCAGACTTGCTAGCTCGACT 59.828 55.000 17.23 9.35 46.95 4.18
466 467 1.797348 GCAGACTTGCTAGCTCGACTC 60.797 57.143 17.23 3.55 46.95 3.36
467 468 0.730265 AGACTTGCTAGCTCGACTCG 59.270 55.000 17.23 0.00 0.00 4.18
468 469 0.727970 GACTTGCTAGCTCGACTCGA 59.272 55.000 17.23 0.29 0.00 4.04
469 470 0.448593 ACTTGCTAGCTCGACTCGAC 59.551 55.000 17.23 0.00 0.00 4.20
470 471 0.730265 CTTGCTAGCTCGACTCGACT 59.270 55.000 17.23 3.28 0.00 4.18
471 472 0.727970 TTGCTAGCTCGACTCGACTC 59.272 55.000 17.23 0.00 0.00 3.36
472 473 1.274476 GCTAGCTCGACTCGACTCG 59.726 63.158 7.70 8.00 34.83 4.18
473 474 1.146957 GCTAGCTCGACTCGACTCGA 61.147 60.000 14.95 14.95 40.37 4.04
474 475 0.573521 CTAGCTCGACTCGACTCGAC 59.426 60.000 12.30 9.85 37.76 4.20
475 476 0.173029 TAGCTCGACTCGACTCGACT 59.827 55.000 12.30 15.03 37.76 4.18
476 477 1.079875 AGCTCGACTCGACTCGACTC 61.080 60.000 12.30 8.02 37.76 3.36
477 478 1.626905 CTCGACTCGACTCGACTCG 59.373 63.158 18.76 18.76 41.10 4.18
478 479 2.020287 CGACTCGACTCGACTCGC 59.980 66.667 14.71 0.00 36.07 5.03
479 480 2.446253 CGACTCGACTCGACTCGCT 61.446 63.158 14.71 0.00 36.07 4.93
480 481 1.138636 CGACTCGACTCGACTCGCTA 61.139 60.000 14.71 0.00 36.07 4.26
481 482 1.210870 GACTCGACTCGACTCGCTAT 58.789 55.000 9.29 0.00 33.47 2.97
482 483 1.190763 GACTCGACTCGACTCGCTATC 59.809 57.143 9.29 3.92 33.47 2.08
483 484 1.209998 CTCGACTCGACTCGCTATCA 58.790 55.000 9.29 0.00 33.47 2.15
484 485 1.593469 CTCGACTCGACTCGCTATCAA 59.407 52.381 9.29 0.00 33.47 2.57
485 486 1.326852 TCGACTCGACTCGCTATCAAC 59.673 52.381 9.29 0.00 33.47 3.18
486 487 1.595003 CGACTCGACTCGCTATCAACC 60.595 57.143 1.53 0.00 0.00 3.77
487 488 0.377554 ACTCGACTCGCTATCAACCG 59.622 55.000 0.00 0.00 0.00 4.44
488 489 0.377554 CTCGACTCGCTATCAACCGT 59.622 55.000 0.00 0.00 0.00 4.83
489 490 0.098200 TCGACTCGCTATCAACCGTG 59.902 55.000 0.00 0.00 0.00 4.94
490 491 1.472276 CGACTCGCTATCAACCGTGC 61.472 60.000 0.00 0.00 0.00 5.34
491 492 0.179134 GACTCGCTATCAACCGTGCT 60.179 55.000 0.00 0.00 0.00 4.40
492 493 0.179134 ACTCGCTATCAACCGTGCTC 60.179 55.000 0.00 0.00 0.00 4.26
493 494 0.101399 CTCGCTATCAACCGTGCTCT 59.899 55.000 0.00 0.00 0.00 4.09
494 495 0.179137 TCGCTATCAACCGTGCTCTG 60.179 55.000 0.00 0.00 0.00 3.35
495 496 0.458543 CGCTATCAACCGTGCTCTGT 60.459 55.000 0.00 0.00 0.00 3.41
496 497 1.202256 CGCTATCAACCGTGCTCTGTA 60.202 52.381 0.00 0.00 0.00 2.74
497 498 2.543861 CGCTATCAACCGTGCTCTGTAT 60.544 50.000 0.00 0.00 0.00 2.29
498 499 3.053455 GCTATCAACCGTGCTCTGTATC 58.947 50.000 0.00 0.00 0.00 2.24
499 500 2.604046 ATCAACCGTGCTCTGTATCC 57.396 50.000 0.00 0.00 0.00 2.59
500 501 1.557099 TCAACCGTGCTCTGTATCCT 58.443 50.000 0.00 0.00 0.00 3.24
501 502 1.204704 TCAACCGTGCTCTGTATCCTG 59.795 52.381 0.00 0.00 0.00 3.86
502 503 1.204704 CAACCGTGCTCTGTATCCTGA 59.795 52.381 0.00 0.00 0.00 3.86
503 504 1.107114 ACCGTGCTCTGTATCCTGAG 58.893 55.000 0.00 0.00 39.09 3.35
504 505 0.387202 CCGTGCTCTGTATCCTGAGG 59.613 60.000 0.00 0.00 37.20 3.86
505 506 1.107114 CGTGCTCTGTATCCTGAGGT 58.893 55.000 0.00 0.00 37.20 3.85
506 507 1.066303 CGTGCTCTGTATCCTGAGGTC 59.934 57.143 0.00 0.00 37.20 3.85
507 508 1.410882 GTGCTCTGTATCCTGAGGTCC 59.589 57.143 0.00 0.00 37.20 4.46
508 509 0.671251 GCTCTGTATCCTGAGGTCCG 59.329 60.000 0.00 0.00 37.20 4.79
509 510 1.323412 CTCTGTATCCTGAGGTCCGG 58.677 60.000 0.00 0.00 34.11 5.14
510 511 0.924090 TCTGTATCCTGAGGTCCGGA 59.076 55.000 0.00 0.00 0.00 5.14
511 512 1.133761 TCTGTATCCTGAGGTCCGGAG 60.134 57.143 3.06 0.00 31.82 4.63
512 513 0.629596 TGTATCCTGAGGTCCGGAGT 59.370 55.000 3.06 0.00 31.82 3.85
513 514 1.006758 TGTATCCTGAGGTCCGGAGTT 59.993 52.381 3.06 0.00 31.82 3.01
514 515 1.682323 GTATCCTGAGGTCCGGAGTTC 59.318 57.143 3.06 6.25 31.82 3.01
515 516 0.336737 ATCCTGAGGTCCGGAGTTCT 59.663 55.000 3.06 2.36 31.82 3.01
516 517 0.997363 TCCTGAGGTCCGGAGTTCTA 59.003 55.000 3.06 0.00 0.00 2.10
517 518 1.104630 CCTGAGGTCCGGAGTTCTAC 58.895 60.000 3.06 0.00 0.00 2.59
518 519 1.341187 CCTGAGGTCCGGAGTTCTACT 60.341 57.143 3.06 0.00 0.00 2.57
519 520 2.018515 CTGAGGTCCGGAGTTCTACTC 58.981 57.143 3.06 6.82 44.32 2.59
526 527 4.074454 GAGTTCTACTCCGCACGC 57.926 61.111 0.00 0.00 39.28 5.34
527 528 1.516603 GAGTTCTACTCCGCACGCC 60.517 63.158 0.00 0.00 39.28 5.68
528 529 1.935327 GAGTTCTACTCCGCACGCCT 61.935 60.000 0.00 0.00 39.28 5.52
529 530 1.516603 GTTCTACTCCGCACGCCTC 60.517 63.158 0.00 0.00 0.00 4.70
530 531 1.974875 TTCTACTCCGCACGCCTCA 60.975 57.895 0.00 0.00 0.00 3.86
531 532 1.320344 TTCTACTCCGCACGCCTCAT 61.320 55.000 0.00 0.00 0.00 2.90
532 533 1.141881 CTACTCCGCACGCCTCATT 59.858 57.895 0.00 0.00 0.00 2.57
533 534 0.460284 CTACTCCGCACGCCTCATTT 60.460 55.000 0.00 0.00 0.00 2.32
534 535 0.036765 TACTCCGCACGCCTCATTTT 60.037 50.000 0.00 0.00 0.00 1.82
535 536 1.298859 ACTCCGCACGCCTCATTTTC 61.299 55.000 0.00 0.00 0.00 2.29
536 537 1.003839 TCCGCACGCCTCATTTTCT 60.004 52.632 0.00 0.00 0.00 2.52
537 538 0.605319 TCCGCACGCCTCATTTTCTT 60.605 50.000 0.00 0.00 0.00 2.52
538 539 0.179189 CCGCACGCCTCATTTTCTTC 60.179 55.000 0.00 0.00 0.00 2.87
539 540 0.516877 CGCACGCCTCATTTTCTTCA 59.483 50.000 0.00 0.00 0.00 3.02
540 541 1.131126 CGCACGCCTCATTTTCTTCAT 59.869 47.619 0.00 0.00 0.00 2.57
541 542 2.523015 GCACGCCTCATTTTCTTCATG 58.477 47.619 0.00 0.00 0.00 3.07
542 543 2.162208 GCACGCCTCATTTTCTTCATGA 59.838 45.455 0.00 0.00 0.00 3.07
543 544 3.366273 GCACGCCTCATTTTCTTCATGAA 60.366 43.478 8.12 8.12 30.12 2.57
544 545 4.409570 CACGCCTCATTTTCTTCATGAAG 58.590 43.478 26.56 26.56 39.71 3.02
545 546 4.154737 CACGCCTCATTTTCTTCATGAAGA 59.845 41.667 30.05 30.05 44.94 2.87
546 547 4.946157 ACGCCTCATTTTCTTCATGAAGAT 59.054 37.500 33.02 19.26 45.78 2.40
547 548 5.416952 ACGCCTCATTTTCTTCATGAAGATT 59.583 36.000 33.02 20.32 45.78 2.40
548 549 6.071728 ACGCCTCATTTTCTTCATGAAGATTT 60.072 34.615 33.02 20.01 45.78 2.17
549 550 7.121168 ACGCCTCATTTTCTTCATGAAGATTTA 59.879 33.333 33.02 22.41 45.78 1.40
550 551 7.430502 CGCCTCATTTTCTTCATGAAGATTTAC 59.569 37.037 33.02 18.01 45.78 2.01
551 552 8.246180 GCCTCATTTTCTTCATGAAGATTTACA 58.754 33.333 33.02 18.59 45.78 2.41
556 557 8.673626 TTTTCTTCATGAAGATTTACATTCGC 57.326 30.769 33.02 0.00 45.78 4.70
557 558 6.363577 TCTTCATGAAGATTTACATTCGCC 57.636 37.500 30.05 0.00 42.06 5.54
558 559 4.794248 TCATGAAGATTTACATTCGCCG 57.206 40.909 0.00 0.00 0.00 6.46
559 560 4.188462 TCATGAAGATTTACATTCGCCGT 58.812 39.130 0.00 0.00 0.00 5.68
560 561 4.634004 TCATGAAGATTTACATTCGCCGTT 59.366 37.500 0.00 0.00 0.00 4.44
561 562 5.123186 TCATGAAGATTTACATTCGCCGTTT 59.877 36.000 0.00 0.00 0.00 3.60
562 563 4.717991 TGAAGATTTACATTCGCCGTTTG 58.282 39.130 0.00 0.00 0.00 2.93
563 564 3.131240 AGATTTACATTCGCCGTTTGC 57.869 42.857 0.00 0.00 0.00 3.68
564 565 2.486203 AGATTTACATTCGCCGTTTGCA 59.514 40.909 0.00 0.00 41.33 4.08
565 566 2.776312 TTTACATTCGCCGTTTGCAA 57.224 40.000 0.00 0.00 41.33 4.08
566 567 2.776312 TTACATTCGCCGTTTGCAAA 57.224 40.000 8.05 8.05 41.33 3.68
567 568 2.999507 TACATTCGCCGTTTGCAAAT 57.000 40.000 16.21 0.00 41.33 2.32
568 569 1.417372 ACATTCGCCGTTTGCAAATG 58.583 45.000 22.08 22.08 41.33 2.32
569 570 1.000827 ACATTCGCCGTTTGCAAATGA 60.001 42.857 28.87 15.48 41.33 2.57
570 571 1.650153 CATTCGCCGTTTGCAAATGAG 59.350 47.619 28.87 21.68 41.33 2.90
571 572 0.039617 TTCGCCGTTTGCAAATGAGG 60.040 50.000 28.87 24.05 41.33 3.86
572 573 2.088178 CGCCGTTTGCAAATGAGGC 61.088 57.895 30.07 30.07 41.33 4.70
573 574 1.737735 GCCGTTTGCAAATGAGGCC 60.738 57.895 29.89 19.09 40.77 5.19
574 575 1.444212 CCGTTTGCAAATGAGGCCG 60.444 57.895 28.87 19.07 0.00 6.13
575 576 1.444212 CGTTTGCAAATGAGGCCGG 60.444 57.895 24.19 0.00 0.00 6.13
576 577 1.737735 GTTTGCAAATGAGGCCGGC 60.738 57.895 21.18 21.18 0.00 6.13
577 578 2.941616 TTTGCAAATGAGGCCGGCC 61.942 57.895 39.29 39.29 0.00 6.13
581 582 4.360405 AAATGAGGCCGGCCCGTT 62.360 61.111 41.72 32.78 39.21 4.44
582 583 3.879180 AAATGAGGCCGGCCCGTTT 62.879 57.895 41.72 35.68 39.21 3.60
593 594 4.341502 CCCGTTTGCGTGCCCTTG 62.342 66.667 0.00 0.00 36.15 3.61
594 595 4.341502 CCGTTTGCGTGCCCTTGG 62.342 66.667 0.00 0.00 36.15 3.61
595 596 4.341502 CGTTTGCGTGCCCTTGGG 62.342 66.667 0.32 0.32 0.00 4.12
607 608 3.884226 CCTTGGGGGAAAGCTCTAC 57.116 57.895 0.00 0.00 37.23 2.59
608 609 1.290134 CCTTGGGGGAAAGCTCTACT 58.710 55.000 0.00 0.00 37.23 2.57
609 610 1.210722 CCTTGGGGGAAAGCTCTACTC 59.789 57.143 0.00 0.00 37.23 2.59
610 611 2.192263 CTTGGGGGAAAGCTCTACTCT 58.808 52.381 0.00 0.00 0.00 3.24
611 612 2.344093 TGGGGGAAAGCTCTACTCTT 57.656 50.000 0.00 0.00 0.00 2.85
612 613 1.909302 TGGGGGAAAGCTCTACTCTTG 59.091 52.381 0.00 0.00 0.00 3.02
613 614 1.210722 GGGGGAAAGCTCTACTCTTGG 59.789 57.143 0.00 0.00 0.00 3.61
614 615 2.188817 GGGGAAAGCTCTACTCTTGGA 58.811 52.381 0.00 0.00 0.00 3.53
615 616 2.093394 GGGGAAAGCTCTACTCTTGGAC 60.093 54.545 0.00 0.00 0.00 4.02
616 617 2.417515 GGGAAAGCTCTACTCTTGGACG 60.418 54.545 0.00 0.00 0.00 4.79
617 618 2.263945 GAAAGCTCTACTCTTGGACGC 58.736 52.381 0.00 0.00 0.00 5.19
618 619 1.257743 AAGCTCTACTCTTGGACGCA 58.742 50.000 0.00 0.00 0.00 5.24
619 620 0.528470 AGCTCTACTCTTGGACGCAC 59.472 55.000 0.00 0.00 0.00 5.34
620 621 0.798771 GCTCTACTCTTGGACGCACG 60.799 60.000 0.00 0.00 0.00 5.34
621 622 0.798771 CTCTACTCTTGGACGCACGC 60.799 60.000 0.00 0.00 0.00 5.34
622 623 2.126618 TACTCTTGGACGCACGCG 60.127 61.111 10.36 10.36 46.03 6.01
623 624 2.523184 CTACTCTTGGACGCACGCGA 62.523 60.000 19.66 0.00 42.83 5.87
624 625 2.791396 TACTCTTGGACGCACGCGAC 62.791 60.000 19.66 12.17 42.83 5.19
652 653 1.043022 CCAATATTGGCCCTCCTTGC 58.957 55.000 21.32 0.00 42.21 4.01
658 659 4.785453 GGCCCTCCTTGCCGACAG 62.785 72.222 0.00 0.00 39.48 3.51
659 660 4.021925 GCCCTCCTTGCCGACAGT 62.022 66.667 0.00 0.00 0.00 3.55
660 661 2.656069 GCCCTCCTTGCCGACAGTA 61.656 63.158 0.00 0.00 0.00 2.74
661 662 1.980052 CCCTCCTTGCCGACAGTAA 59.020 57.895 0.00 0.00 0.00 2.24
662 663 0.323629 CCCTCCTTGCCGACAGTAAA 59.676 55.000 0.00 0.00 0.00 2.01
663 664 1.271163 CCCTCCTTGCCGACAGTAAAA 60.271 52.381 0.00 0.00 0.00 1.52
664 665 2.500229 CCTCCTTGCCGACAGTAAAAA 58.500 47.619 0.00 0.00 0.00 1.94
742 743 2.143419 CGAGGGGCCCTATGAAGCT 61.143 63.158 28.92 8.16 31.76 3.74
743 744 1.700042 CGAGGGGCCCTATGAAGCTT 61.700 60.000 28.92 0.00 31.76 3.74
745 746 0.624500 AGGGGCCCTATGAAGCTTCA 60.625 55.000 30.23 30.23 42.14 3.02
746 747 0.258774 GGGGCCCTATGAAGCTTCAA 59.741 55.000 31.55 19.21 41.13 2.69
747 748 1.341976 GGGGCCCTATGAAGCTTCAAA 60.342 52.381 31.55 11.20 41.13 2.69
748 749 2.456577 GGGCCCTATGAAGCTTCAAAA 58.543 47.619 31.55 21.12 41.13 2.44
749 750 2.831526 GGGCCCTATGAAGCTTCAAAAA 59.168 45.455 31.55 18.78 41.13 1.94
750 751 3.118992 GGGCCCTATGAAGCTTCAAAAAG 60.119 47.826 31.55 25.43 41.13 2.27
751 752 3.511540 GGCCCTATGAAGCTTCAAAAAGT 59.488 43.478 31.55 17.81 41.13 2.66
752 753 4.380973 GGCCCTATGAAGCTTCAAAAAGTC 60.381 45.833 31.55 18.62 41.13 3.01
753 754 4.218417 GCCCTATGAAGCTTCAAAAAGTCA 59.782 41.667 31.55 8.14 41.13 3.41
754 755 5.105595 GCCCTATGAAGCTTCAAAAAGTCAT 60.106 40.000 31.55 15.68 41.13 3.06
755 756 6.095440 GCCCTATGAAGCTTCAAAAAGTCATA 59.905 38.462 31.55 15.95 41.13 2.15
756 757 7.201857 GCCCTATGAAGCTTCAAAAAGTCATAT 60.202 37.037 31.55 14.26 41.13 1.78
757 758 9.342308 CCCTATGAAGCTTCAAAAAGTCATATA 57.658 33.333 31.55 14.62 41.13 0.86
822 848 1.327507 GCGTCCAAAAAGTCATTCGC 58.672 50.000 0.00 0.00 36.06 4.70
885 912 3.718864 CGTTCAATAAATTCGCCATCACG 59.281 43.478 0.00 0.00 0.00 4.35
891 918 0.322098 AATTCGCCATCACGACCCAA 60.322 50.000 0.00 0.00 42.78 4.12
941 968 0.038526 TCACTTCCTTCGACGCTTCC 60.039 55.000 0.00 0.00 0.00 3.46
979 1011 0.909133 CCCAATTCCCAACCCCCAAG 60.909 60.000 0.00 0.00 0.00 3.61
987 1019 1.427072 CCAACCCCCAAGACCAGTCT 61.427 60.000 0.00 0.00 42.75 3.24
988 1020 0.036875 CAACCCCCAAGACCAGTCTC 59.963 60.000 0.00 0.00 39.39 3.36
990 1022 1.538876 CCCCCAAGACCAGTCTCCA 60.539 63.158 0.00 0.00 39.39 3.86
991 1023 1.557269 CCCCCAAGACCAGTCTCCAG 61.557 65.000 0.00 0.00 39.39 3.86
992 1024 0.838122 CCCCAAGACCAGTCTCCAGT 60.838 60.000 0.00 0.00 39.39 4.00
1040 1072 4.824515 CCTCCTCGCCCTCCTCGT 62.825 72.222 0.00 0.00 0.00 4.18
1332 1364 1.374758 CGAGCAGTCCTGGACCAAC 60.375 63.158 22.81 12.57 32.18 3.77
1376 1408 4.467084 GGCGGCCAACTGATCCGA 62.467 66.667 15.62 0.00 45.53 4.55
1438 1484 3.047877 GTCCGCCCGTCCTTTGTG 61.048 66.667 0.00 0.00 0.00 3.33
1439 1485 3.552384 TCCGCCCGTCCTTTGTGT 61.552 61.111 0.00 0.00 0.00 3.72
1448 1494 3.744426 CCCGTCCTTTGTGTAGTTTGTAG 59.256 47.826 0.00 0.00 0.00 2.74
1452 1498 6.211515 CGTCCTTTGTGTAGTTTGTAGTACT 58.788 40.000 0.00 0.00 32.42 2.73
1453 1499 6.143438 CGTCCTTTGTGTAGTTTGTAGTACTG 59.857 42.308 5.39 0.00 32.42 2.74
1478 1527 2.420022 GTGCTGCCAATAAATGAGTCGT 59.580 45.455 0.00 0.00 0.00 4.34
1528 1582 8.776470 GTTCATCATCCTGACTACTACTACTAC 58.224 40.741 0.00 0.00 0.00 2.73
1531 1585 9.426837 CATCATCCTGACTACTACTACTACTAC 57.573 40.741 0.00 0.00 0.00 2.73
1532 1586 8.780616 TCATCCTGACTACTACTACTACTACT 57.219 38.462 0.00 0.00 0.00 2.57
1533 1587 9.874195 TCATCCTGACTACTACTACTACTACTA 57.126 37.037 0.00 0.00 0.00 1.82
1535 1589 9.881773 ATCCTGACTACTACTACTACTACTAGT 57.118 37.037 0.00 0.00 37.04 2.57
1536 1590 9.130661 TCCTGACTACTACTACTACTACTAGTG 57.869 40.741 5.39 0.00 34.79 2.74
1592 1653 0.036732 TTGTGATCCCTGGCTGTCAC 59.963 55.000 13.87 13.87 40.93 3.67
1601 1662 0.896940 CTGGCTGTCACCCATTGCTT 60.897 55.000 0.00 0.00 0.00 3.91
1602 1663 1.180456 TGGCTGTCACCCATTGCTTG 61.180 55.000 0.00 0.00 0.00 4.01
1603 1664 0.895100 GGCTGTCACCCATTGCTTGA 60.895 55.000 0.00 0.00 0.00 3.02
1604 1665 1.180029 GCTGTCACCCATTGCTTGAT 58.820 50.000 0.00 0.00 0.00 2.57
1605 1666 1.547372 GCTGTCACCCATTGCTTGATT 59.453 47.619 0.00 0.00 0.00 2.57
1607 1668 3.581755 CTGTCACCCATTGCTTGATTTG 58.418 45.455 0.00 0.00 0.00 2.32
1616 1683 4.501071 CATTGCTTGATTTGGAAGGAAGG 58.499 43.478 0.00 0.00 34.69 3.46
1652 1719 2.553268 GCTCACGTGCACTGCTTC 59.447 61.111 16.19 0.00 0.00 3.86
1656 1723 2.021584 CACGTGCACTGCTTCGCTA 61.022 57.895 16.19 0.00 32.57 4.26
1657 1724 1.300620 ACGTGCACTGCTTCGCTAA 60.301 52.632 16.19 0.00 32.57 3.09
1694 1762 2.833794 TCTGTGAAGTTTCTGGAACCG 58.166 47.619 0.00 0.00 39.13 4.44
1791 1872 3.857157 TCTGGAGGCTTGTGTAAAGTT 57.143 42.857 0.00 0.00 0.00 2.66
1803 1884 2.161609 GTGTAAAGTTATGCAAGCCGCT 59.838 45.455 0.00 0.00 43.06 5.52
1805 1886 1.247567 AAAGTTATGCAAGCCGCTGT 58.752 45.000 0.00 0.00 43.06 4.40
1807 1888 1.247567 AGTTATGCAAGCCGCTGTTT 58.752 45.000 0.00 0.00 43.06 2.83
1808 1889 1.613437 AGTTATGCAAGCCGCTGTTTT 59.387 42.857 0.00 0.00 43.06 2.43
1810 1891 1.533625 TATGCAAGCCGCTGTTTTCT 58.466 45.000 0.00 0.00 43.06 2.52
1811 1892 0.038892 ATGCAAGCCGCTGTTTTCTG 60.039 50.000 0.00 0.00 43.06 3.02
1814 1895 1.802508 GCAAGCCGCTGTTTTCTGTTT 60.803 47.619 0.00 0.00 37.77 2.83
1827 1983 6.853720 TGTTTTCTGTTTCACGTGGATAAAA 58.146 32.000 17.00 5.85 0.00 1.52
1840 1996 4.260375 CGTGGATAAAATCTGGCTTTCTCG 60.260 45.833 0.00 0.00 0.00 4.04
1857 2013 6.091441 GCTTTCTCGTAGTGTCTGAATTTCAT 59.909 38.462 0.00 0.00 0.00 2.57
1863 2019 6.586463 TCGTAGTGTCTGAATTTCATTCACTC 59.414 38.462 25.56 19.37 43.84 3.51
1864 2020 6.366061 CGTAGTGTCTGAATTTCATTCACTCA 59.634 38.462 25.56 16.13 43.84 3.41
1876 2032 3.381590 TCATTCACTCACTCACTATCGGG 59.618 47.826 0.00 0.00 0.00 5.14
1897 2053 3.609853 GTCATGTGAGGGCATGTCTTTA 58.390 45.455 0.00 0.00 44.68 1.85
1901 2057 3.877559 TGTGAGGGCATGTCTTTATCAG 58.122 45.455 0.00 0.00 0.00 2.90
1916 2072 2.715532 ATCAGTGAACTGGTGCGCGT 62.716 55.000 8.43 0.00 43.91 6.01
1919 2075 2.108157 TGAACTGGTGCGCGTTCT 59.892 55.556 21.21 0.00 40.04 3.01
1920 2076 1.522806 TGAACTGGTGCGCGTTCTT 60.523 52.632 21.21 2.75 40.04 2.52
1947 2103 6.723298 TTTCAATTGAAAAACTAGCCAGGA 57.277 33.333 27.22 3.96 40.68 3.86
1948 2104 5.964958 TCAATTGAAAAACTAGCCAGGAG 57.035 39.130 5.45 0.00 0.00 3.69
1949 2105 5.385198 TCAATTGAAAAACTAGCCAGGAGT 58.615 37.500 5.45 0.00 0.00 3.85
1950 2106 5.473504 TCAATTGAAAAACTAGCCAGGAGTC 59.526 40.000 5.45 0.00 0.00 3.36
1951 2107 3.040147 TGAAAAACTAGCCAGGAGTCG 57.960 47.619 0.00 0.00 0.00 4.18
1952 2108 1.732809 GAAAAACTAGCCAGGAGTCGC 59.267 52.381 0.00 0.00 0.00 5.19
1953 2109 0.977395 AAAACTAGCCAGGAGTCGCT 59.023 50.000 0.00 0.00 39.17 4.93
1954 2110 0.247736 AAACTAGCCAGGAGTCGCTG 59.752 55.000 0.00 2.15 36.53 5.18
1957 2113 0.749649 CTAGCCAGGAGTCGCTGATT 59.250 55.000 9.46 1.96 36.53 2.57
1958 2114 1.137872 CTAGCCAGGAGTCGCTGATTT 59.862 52.381 9.46 0.08 36.53 2.17
1959 2115 1.195115 AGCCAGGAGTCGCTGATTTA 58.805 50.000 9.46 0.00 32.98 1.40
1961 2117 1.137086 GCCAGGAGTCGCTGATTTAGA 59.863 52.381 9.46 0.00 0.00 2.10
1962 2118 2.815478 CCAGGAGTCGCTGATTTAGAC 58.185 52.381 9.46 0.00 35.30 2.59
1963 2119 2.482142 CCAGGAGTCGCTGATTTAGACC 60.482 54.545 9.46 0.00 35.65 3.85
1966 2122 2.482142 GGAGTCGCTGATTTAGACCAGG 60.482 54.545 0.00 0.00 35.65 4.45
1968 2124 2.166664 AGTCGCTGATTTAGACCAGGTC 59.833 50.000 12.25 12.25 35.65 3.85
1969 2125 1.134367 TCGCTGATTTAGACCAGGTCG 59.866 52.381 14.32 0.00 37.67 4.79
1972 2128 2.353803 GCTGATTTAGACCAGGTCGTGT 60.354 50.000 14.32 0.00 37.67 4.49
1973 2129 3.512680 CTGATTTAGACCAGGTCGTGTC 58.487 50.000 14.32 11.25 37.67 3.67
1974 2130 3.162666 TGATTTAGACCAGGTCGTGTCT 58.837 45.455 14.32 0.00 43.85 3.41
1975 2131 3.192844 TGATTTAGACCAGGTCGTGTCTC 59.807 47.826 14.32 9.14 40.84 3.36
1976 2132 2.281539 TTAGACCAGGTCGTGTCTCA 57.718 50.000 14.32 0.00 40.84 3.27
1977 2133 1.531423 TAGACCAGGTCGTGTCTCAC 58.469 55.000 14.32 0.00 40.84 3.51
1978 2134 1.179814 AGACCAGGTCGTGTCTCACC 61.180 60.000 14.32 0.00 37.24 4.02
1988 2144 1.142097 TGTCTCACCGAACGCACAA 59.858 52.632 0.00 0.00 0.00 3.33
2009 2170 1.388065 TTGTGCCAAAACCCCGTGAG 61.388 55.000 0.00 0.00 0.00 3.51
2031 2192 2.884639 GACTTGCTTTTGGAGGCTTGTA 59.115 45.455 0.00 0.00 0.00 2.41
2033 2194 4.662278 ACTTGCTTTTGGAGGCTTGTATA 58.338 39.130 0.00 0.00 0.00 1.47
2035 2196 5.716703 ACTTGCTTTTGGAGGCTTGTATAAT 59.283 36.000 0.00 0.00 0.00 1.28
2038 2199 7.896383 TGCTTTTGGAGGCTTGTATAATAAT 57.104 32.000 0.00 0.00 0.00 1.28
2067 2228 0.877649 ATGCAAGTCGGCGATGCTAG 60.878 55.000 28.88 13.36 40.66 3.42
2068 2229 1.519455 GCAAGTCGGCGATGCTAGT 60.519 57.895 23.92 0.00 37.12 2.57
2091 2252 3.166657 GCAGCTGCAAATACTTTCTTCG 58.833 45.455 33.36 0.00 41.59 3.79
2092 2253 3.365364 GCAGCTGCAAATACTTTCTTCGT 60.365 43.478 33.36 0.00 41.59 3.85
2093 2254 4.398247 CAGCTGCAAATACTTTCTTCGTC 58.602 43.478 0.00 0.00 0.00 4.20
2094 2255 3.437049 AGCTGCAAATACTTTCTTCGTCC 59.563 43.478 1.02 0.00 0.00 4.79
2095 2256 3.725010 GCTGCAAATACTTTCTTCGTCCG 60.725 47.826 0.00 0.00 0.00 4.79
2096 2257 3.655486 TGCAAATACTTTCTTCGTCCGA 58.345 40.909 0.00 0.00 0.00 4.55
2097 2258 4.059511 TGCAAATACTTTCTTCGTCCGAA 58.940 39.130 1.81 1.81 0.00 4.30
2098 2259 4.693566 TGCAAATACTTTCTTCGTCCGAAT 59.306 37.500 2.20 0.00 33.28 3.34
2099 2260 5.870433 TGCAAATACTTTCTTCGTCCGAATA 59.130 36.000 2.20 0.00 33.28 1.75
2100 2261 6.369340 TGCAAATACTTTCTTCGTCCGAATAA 59.631 34.615 2.20 0.00 33.28 1.40
2101 2262 7.095144 TGCAAATACTTTCTTCGTCCGAATAAA 60.095 33.333 11.01 11.01 33.28 1.40
2102 2263 7.908601 GCAAATACTTTCTTCGTCCGAATAAAT 59.091 33.333 11.66 6.83 32.47 1.40
2103 2264 9.769093 CAAATACTTTCTTCGTCCGAATAAATT 57.231 29.630 11.66 9.60 32.47 1.82
2105 2266 9.769093 AATACTTTCTTCGTCCGAATAAATTTG 57.231 29.630 11.66 5.47 32.47 2.32
2106 2267 7.198306 ACTTTCTTCGTCCGAATAAATTTGT 57.802 32.000 11.66 5.94 32.47 2.83
2107 2268 7.295930 ACTTTCTTCGTCCGAATAAATTTGTC 58.704 34.615 11.66 0.00 32.47 3.18
2108 2269 5.789710 TCTTCGTCCGAATAAATTTGTCC 57.210 39.130 0.00 0.00 33.28 4.02
2109 2270 4.632688 TCTTCGTCCGAATAAATTTGTCCC 59.367 41.667 0.00 0.00 33.28 4.46
2110 2271 3.940319 TCGTCCGAATAAATTTGTCCCA 58.060 40.909 0.00 0.00 0.00 4.37
2111 2272 4.325119 TCGTCCGAATAAATTTGTCCCAA 58.675 39.130 0.00 0.00 0.00 4.12
2112 2273 4.944930 TCGTCCGAATAAATTTGTCCCAAT 59.055 37.500 0.00 0.00 0.00 3.16
2113 2274 5.065474 TCGTCCGAATAAATTTGTCCCAATC 59.935 40.000 0.00 0.00 0.00 2.67
2114 2275 5.065988 CGTCCGAATAAATTTGTCCCAATCT 59.934 40.000 0.00 0.00 0.00 2.40
2115 2276 6.404293 CGTCCGAATAAATTTGTCCCAATCTT 60.404 38.462 0.00 0.00 0.00 2.40
2116 2277 6.751888 GTCCGAATAAATTTGTCCCAATCTTG 59.248 38.462 0.00 0.00 0.00 3.02
2117 2278 6.435904 TCCGAATAAATTTGTCCCAATCTTGT 59.564 34.615 0.00 0.00 0.00 3.16
2118 2279 7.039363 TCCGAATAAATTTGTCCCAATCTTGTT 60.039 33.333 0.00 0.00 0.00 2.83
2119 2280 7.275560 CCGAATAAATTTGTCCCAATCTTGTTC 59.724 37.037 0.00 0.00 0.00 3.18
2120 2281 8.028938 CGAATAAATTTGTCCCAATCTTGTTCT 58.971 33.333 0.00 0.00 0.00 3.01
2121 2282 9.710900 GAATAAATTTGTCCCAATCTTGTTCTT 57.289 29.630 0.00 0.00 0.00 2.52
2122 2283 9.710900 AATAAATTTGTCCCAATCTTGTTCTTC 57.289 29.630 0.00 0.00 0.00 2.87
2123 2284 6.729690 AATTTGTCCCAATCTTGTTCTTCA 57.270 33.333 0.00 0.00 0.00 3.02
2124 2285 6.923199 ATTTGTCCCAATCTTGTTCTTCAT 57.077 33.333 0.00 0.00 0.00 2.57
2125 2286 5.710513 TTGTCCCAATCTTGTTCTTCATG 57.289 39.130 0.00 0.00 0.00 3.07
2126 2287 4.728772 TGTCCCAATCTTGTTCTTCATGT 58.271 39.130 0.00 0.00 0.00 3.21
2127 2288 5.139727 TGTCCCAATCTTGTTCTTCATGTT 58.860 37.500 0.00 0.00 0.00 2.71
2128 2289 5.009911 TGTCCCAATCTTGTTCTTCATGTTG 59.990 40.000 0.00 0.00 0.00 3.33
2129 2290 4.523943 TCCCAATCTTGTTCTTCATGTTGG 59.476 41.667 0.00 0.00 35.23 3.77
2130 2291 4.523943 CCCAATCTTGTTCTTCATGTTGGA 59.476 41.667 6.09 0.00 36.17 3.53
2131 2292 5.010922 CCCAATCTTGTTCTTCATGTTGGAA 59.989 40.000 6.09 1.15 36.17 3.53
2132 2293 6.462768 CCCAATCTTGTTCTTCATGTTGGAAA 60.463 38.462 6.09 0.00 36.17 3.13
2133 2294 7.156673 CCAATCTTGTTCTTCATGTTGGAAAT 58.843 34.615 0.00 0.00 36.17 2.17
2134 2295 8.306038 CCAATCTTGTTCTTCATGTTGGAAATA 58.694 33.333 0.00 0.00 36.17 1.40
2135 2296 9.865321 CAATCTTGTTCTTCATGTTGGAAATAT 57.135 29.630 0.00 0.00 0.00 1.28
2216 2377 9.900710 AGTAGCAGAGATTAAACTAATCATACG 57.099 33.333 8.66 0.00 45.41 3.06
2217 2378 9.894783 GTAGCAGAGATTAAACTAATCATACGA 57.105 33.333 8.66 0.00 45.41 3.43
2219 2380 9.250624 AGCAGAGATTAAACTAATCATACGAAC 57.749 33.333 8.66 0.00 45.41 3.95
2220 2381 9.250624 GCAGAGATTAAACTAATCATACGAACT 57.749 33.333 8.66 0.00 45.41 3.01
2228 2389 8.522178 AAACTAATCATACGAACTAGCATAGC 57.478 34.615 0.00 0.00 44.39 2.97
2229 2390 7.215719 ACTAATCATACGAACTAGCATAGCA 57.784 36.000 0.00 0.00 44.39 3.49
2230 2391 7.309177 ACTAATCATACGAACTAGCATAGCAG 58.691 38.462 0.00 0.00 44.39 4.24
2231 2392 5.966742 ATCATACGAACTAGCATAGCAGA 57.033 39.130 0.00 0.00 44.39 4.26
2232 2393 5.966742 TCATACGAACTAGCATAGCAGAT 57.033 39.130 0.00 0.00 44.39 2.90
2233 2394 5.703876 TCATACGAACTAGCATAGCAGATG 58.296 41.667 0.00 0.00 44.39 2.90
2234 2395 5.473504 TCATACGAACTAGCATAGCAGATGA 59.526 40.000 2.96 0.00 44.39 2.92
2235 2396 4.655762 ACGAACTAGCATAGCAGATGAA 57.344 40.909 2.96 0.00 44.39 2.57
2236 2397 4.363999 ACGAACTAGCATAGCAGATGAAC 58.636 43.478 2.96 0.00 44.39 3.18
2237 2398 4.142160 ACGAACTAGCATAGCAGATGAACA 60.142 41.667 2.96 0.00 44.39 3.18
2238 2399 4.443725 CGAACTAGCATAGCAGATGAACAG 59.556 45.833 2.96 0.00 44.39 3.16
2239 2400 5.595885 GAACTAGCATAGCAGATGAACAGA 58.404 41.667 2.96 0.00 44.39 3.41
2240 2401 5.804944 ACTAGCATAGCAGATGAACAGAT 57.195 39.130 2.96 0.00 44.39 2.90
2241 2402 5.782047 ACTAGCATAGCAGATGAACAGATC 58.218 41.667 2.96 0.00 44.39 2.75
2242 2403 4.684484 AGCATAGCAGATGAACAGATCA 57.316 40.909 0.00 0.00 43.67 2.92
2243 2404 4.378774 AGCATAGCAGATGAACAGATCAC 58.621 43.478 0.00 0.00 41.93 3.06
2244 2405 4.124970 GCATAGCAGATGAACAGATCACA 58.875 43.478 0.00 0.00 41.93 3.58
2245 2406 4.755629 GCATAGCAGATGAACAGATCACAT 59.244 41.667 0.00 0.00 41.93 3.21
2246 2407 5.107026 GCATAGCAGATGAACAGATCACATC 60.107 44.000 0.00 4.97 41.93 3.06
2248 2409 5.866159 AGCAGATGAACAGATCACATCTA 57.134 39.130 17.55 0.00 45.61 1.98
2249 2410 5.845103 AGCAGATGAACAGATCACATCTAG 58.155 41.667 17.55 14.33 45.61 2.43
2250 2411 4.989797 GCAGATGAACAGATCACATCTAGG 59.010 45.833 17.55 11.42 45.61 3.02
2251 2412 5.539979 CAGATGAACAGATCACATCTAGGG 58.460 45.833 17.55 8.08 45.61 3.53
2252 2413 3.827008 TGAACAGATCACATCTAGGGC 57.173 47.619 0.00 0.00 37.58 5.19
2253 2414 3.106827 TGAACAGATCACATCTAGGGCA 58.893 45.455 0.00 0.00 37.58 5.36
2254 2415 3.118629 TGAACAGATCACATCTAGGGCAC 60.119 47.826 0.00 0.00 37.58 5.01
2255 2416 2.470990 ACAGATCACATCTAGGGCACA 58.529 47.619 0.00 0.00 37.58 4.57
2256 2417 3.044156 ACAGATCACATCTAGGGCACAT 58.956 45.455 0.00 0.00 37.58 3.21
2257 2418 4.226384 ACAGATCACATCTAGGGCACATA 58.774 43.478 0.00 0.00 37.58 2.29
2258 2419 4.039730 ACAGATCACATCTAGGGCACATAC 59.960 45.833 0.00 0.00 37.58 2.39
2259 2420 4.282957 CAGATCACATCTAGGGCACATACT 59.717 45.833 0.00 0.00 37.58 2.12
2260 2421 5.478332 CAGATCACATCTAGGGCACATACTA 59.522 44.000 0.00 0.00 37.58 1.82
2261 2422 5.714333 AGATCACATCTAGGGCACATACTAG 59.286 44.000 0.00 0.00 38.00 2.57
2262 2423 5.061721 TCACATCTAGGGCACATACTAGA 57.938 43.478 0.00 4.14 46.80 2.43
2263 2424 5.454966 TCACATCTAGGGCACATACTAGAA 58.545 41.667 0.00 0.00 46.12 2.10
2264 2425 5.897250 TCACATCTAGGGCACATACTAGAAA 59.103 40.000 0.00 0.00 46.12 2.52
2265 2426 5.986135 CACATCTAGGGCACATACTAGAAAC 59.014 44.000 0.00 0.00 46.12 2.78
2266 2427 5.661312 ACATCTAGGGCACATACTAGAAACA 59.339 40.000 0.00 0.00 46.12 2.83
2267 2428 6.327626 ACATCTAGGGCACATACTAGAAACAT 59.672 38.462 0.00 0.00 46.12 2.71
2268 2429 6.161855 TCTAGGGCACATACTAGAAACATG 57.838 41.667 0.00 0.00 41.84 3.21
2269 2430 5.897250 TCTAGGGCACATACTAGAAACATGA 59.103 40.000 0.00 0.00 41.84 3.07
2270 2431 5.435686 AGGGCACATACTAGAAACATGAA 57.564 39.130 0.00 0.00 0.00 2.57
2271 2432 6.006275 AGGGCACATACTAGAAACATGAAT 57.994 37.500 0.00 0.00 0.00 2.57
2272 2433 6.426587 AGGGCACATACTAGAAACATGAATT 58.573 36.000 0.00 0.00 0.00 2.17
2273 2434 6.543831 AGGGCACATACTAGAAACATGAATTC 59.456 38.462 0.00 3.71 0.00 2.17
2274 2435 6.543831 GGGCACATACTAGAAACATGAATTCT 59.456 38.462 18.00 18.00 40.18 2.40
2275 2436 7.715249 GGGCACATACTAGAAACATGAATTCTA 59.285 37.037 18.23 18.23 38.13 2.10
2276 2437 9.277783 GGCACATACTAGAAACATGAATTCTAT 57.722 33.333 19.04 13.98 38.38 1.98
2283 2444 9.469807 ACTAGAAACATGAATTCTATCACGATC 57.530 33.333 19.04 0.00 38.38 3.69
2284 2445 9.689976 CTAGAAACATGAATTCTATCACGATCT 57.310 33.333 19.04 3.54 38.38 2.75
2285 2446 8.586570 AGAAACATGAATTCTATCACGATCTC 57.413 34.615 14.15 0.00 35.43 2.75
2286 2447 6.999956 AACATGAATTCTATCACGATCTCG 57.000 37.500 7.05 0.00 46.33 4.04
2287 2448 6.319141 ACATGAATTCTATCACGATCTCGA 57.681 37.500 7.05 0.00 43.02 4.04
2288 2449 6.739112 ACATGAATTCTATCACGATCTCGAA 58.261 36.000 7.05 0.00 43.02 3.71
2289 2450 6.638873 ACATGAATTCTATCACGATCTCGAAC 59.361 38.462 7.05 0.00 43.02 3.95
2290 2451 6.131544 TGAATTCTATCACGATCTCGAACA 57.868 37.500 7.05 0.00 43.02 3.18
2291 2452 6.202226 TGAATTCTATCACGATCTCGAACAG 58.798 40.000 7.05 0.00 43.02 3.16
2292 2453 4.553756 TTCTATCACGATCTCGAACAGG 57.446 45.455 6.60 0.00 43.02 4.00
2293 2454 3.805207 TCTATCACGATCTCGAACAGGA 58.195 45.455 6.60 0.00 43.02 3.86
2294 2455 4.196971 TCTATCACGATCTCGAACAGGAA 58.803 43.478 6.60 0.00 43.02 3.36
2295 2456 4.822350 TCTATCACGATCTCGAACAGGAAT 59.178 41.667 6.60 0.00 43.02 3.01
2296 2457 3.150848 TCACGATCTCGAACAGGAATG 57.849 47.619 6.60 0.00 43.02 2.67
2297 2458 2.752903 TCACGATCTCGAACAGGAATGA 59.247 45.455 6.60 0.00 43.02 2.57
2298 2459 3.381590 TCACGATCTCGAACAGGAATGAT 59.618 43.478 6.60 0.00 43.02 2.45
2299 2460 4.578928 TCACGATCTCGAACAGGAATGATA 59.421 41.667 6.60 0.00 43.02 2.15
2300 2461 4.914504 CACGATCTCGAACAGGAATGATAG 59.085 45.833 6.60 0.00 43.02 2.08
2301 2462 4.822350 ACGATCTCGAACAGGAATGATAGA 59.178 41.667 6.60 0.00 43.02 1.98
2302 2463 5.299531 ACGATCTCGAACAGGAATGATAGAA 59.700 40.000 6.60 0.00 43.02 2.10
2303 2464 6.015856 ACGATCTCGAACAGGAATGATAGAAT 60.016 38.462 6.60 0.00 43.02 2.40
2304 2465 6.526325 CGATCTCGAACAGGAATGATAGAATC 59.474 42.308 0.00 0.00 43.02 2.52
2305 2466 6.715347 TCTCGAACAGGAATGATAGAATCA 57.285 37.500 0.00 0.00 44.55 2.57
2306 2467 6.507900 TCTCGAACAGGAATGATAGAATCAC 58.492 40.000 0.00 0.00 43.01 3.06
2307 2468 6.096846 TCTCGAACAGGAATGATAGAATCACA 59.903 38.462 0.00 0.00 43.01 3.58
2308 2469 6.820335 TCGAACAGGAATGATAGAATCACAT 58.180 36.000 0.00 0.00 43.01 3.21
2309 2470 7.951591 TCGAACAGGAATGATAGAATCACATA 58.048 34.615 0.00 0.00 43.01 2.29
2310 2471 7.867909 TCGAACAGGAATGATAGAATCACATAC 59.132 37.037 0.00 0.00 43.01 2.39
2311 2472 7.148902 CGAACAGGAATGATAGAATCACATACG 60.149 40.741 0.00 0.00 43.01 3.06
2312 2473 6.459066 ACAGGAATGATAGAATCACATACGG 58.541 40.000 0.00 0.00 43.01 4.02
2313 2474 6.042093 ACAGGAATGATAGAATCACATACGGT 59.958 38.462 0.00 0.00 43.01 4.83
2321 2482 3.195002 CACATACGGTGCAGCGGG 61.195 66.667 37.73 28.25 41.36 6.13
2322 2483 3.387091 ACATACGGTGCAGCGGGA 61.387 61.111 37.73 26.82 0.00 5.14
2323 2484 2.586079 CATACGGTGCAGCGGGAG 60.586 66.667 37.73 23.81 0.00 4.30
2345 2506 4.534141 ACCGCCGGTGTTGACGTT 62.534 61.111 8.62 0.00 32.98 3.99
2346 2507 4.007940 CCGCCGGTGTTGACGTTG 62.008 66.667 15.14 0.00 0.00 4.10
2347 2508 3.266376 CGCCGGTGTTGACGTTGT 61.266 61.111 6.91 0.00 0.00 3.32
2348 2509 2.629763 GCCGGTGTTGACGTTGTC 59.370 61.111 1.90 0.00 0.00 3.18
2349 2510 2.925352 CCGGTGTTGACGTTGTCG 59.075 61.111 0.00 0.00 43.34 4.35
2350 2511 2.244382 CGGTGTTGACGTTGTCGC 59.756 61.111 0.00 0.00 41.18 5.19
2351 2512 2.629763 GGTGTTGACGTTGTCGCC 59.370 61.111 0.00 0.00 41.18 5.54
2352 2513 2.629763 GTGTTGACGTTGTCGCCC 59.370 61.111 0.00 0.00 41.18 6.13
2353 2514 2.174969 GTGTTGACGTTGTCGCCCA 61.175 57.895 0.00 0.00 41.18 5.36
2354 2515 1.227704 TGTTGACGTTGTCGCCCAT 60.228 52.632 0.00 0.00 41.18 4.00
2355 2516 1.206578 GTTGACGTTGTCGCCCATG 59.793 57.895 0.00 0.00 41.18 3.66
2356 2517 1.227704 TTGACGTTGTCGCCCATGT 60.228 52.632 0.00 0.00 41.18 3.21
2357 2518 1.225376 TTGACGTTGTCGCCCATGTC 61.225 55.000 0.00 0.00 41.18 3.06
2358 2519 2.726691 GACGTTGTCGCCCATGTCG 61.727 63.158 0.00 0.00 41.18 4.35
2359 2520 2.736995 CGTTGTCGCCCATGTCGT 60.737 61.111 4.83 0.00 0.00 4.34
2360 2521 2.726691 CGTTGTCGCCCATGTCGTC 61.727 63.158 4.83 0.93 0.00 4.20
2361 2522 2.431771 TTGTCGCCCATGTCGTCG 60.432 61.111 4.83 0.00 0.00 5.12
2362 2523 2.921797 TTGTCGCCCATGTCGTCGA 61.922 57.895 0.00 0.00 0.00 4.20
2363 2524 2.579787 GTCGCCCATGTCGTCGAG 60.580 66.667 0.00 0.00 0.00 4.04
2364 2525 3.822192 TCGCCCATGTCGTCGAGG 61.822 66.667 0.00 0.00 0.00 4.63
2365 2526 3.822192 CGCCCATGTCGTCGAGGA 61.822 66.667 3.17 3.17 0.00 3.71
2366 2527 2.815308 GCCCATGTCGTCGAGGAT 59.185 61.111 11.48 0.00 0.00 3.24
2367 2528 1.592669 GCCCATGTCGTCGAGGATG 60.593 63.158 11.48 6.43 0.00 3.51
2368 2529 2.016393 GCCCATGTCGTCGAGGATGA 62.016 60.000 11.48 1.74 0.00 2.92
2369 2530 0.031314 CCCATGTCGTCGAGGATGAG 59.969 60.000 11.48 4.15 0.00 2.90
2370 2531 0.031314 CCATGTCGTCGAGGATGAGG 59.969 60.000 11.48 9.30 0.00 3.86
2371 2532 0.741326 CATGTCGTCGAGGATGAGGT 59.259 55.000 11.48 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.221933 TGTATAATACGCAAAAAGGAGAAGAAA 57.778 29.630 0.00 0.00 0.00 2.52
28 29 8.780846 TGTATAATACGCAAAAAGGAGAAGAA 57.219 30.769 0.00 0.00 0.00 2.52
29 30 8.255206 TCTGTATAATACGCAAAAAGGAGAAGA 58.745 33.333 0.00 0.00 0.00 2.87
30 31 8.420374 TCTGTATAATACGCAAAAAGGAGAAG 57.580 34.615 0.00 0.00 0.00 2.85
31 32 8.780846 TTCTGTATAATACGCAAAAAGGAGAA 57.219 30.769 0.00 0.00 0.00 2.87
32 33 8.780846 TTTCTGTATAATACGCAAAAAGGAGA 57.219 30.769 0.00 0.00 0.00 3.71
33 34 8.665685 ACTTTCTGTATAATACGCAAAAAGGAG 58.334 33.333 0.00 0.00 0.00 3.69
34 35 8.556213 ACTTTCTGTATAATACGCAAAAAGGA 57.444 30.769 0.00 0.00 0.00 3.36
35 36 9.274065 GAACTTTCTGTATAATACGCAAAAAGG 57.726 33.333 0.00 0.00 0.00 3.11
36 37 9.820229 TGAACTTTCTGTATAATACGCAAAAAG 57.180 29.630 0.00 0.00 0.00 2.27
39 40 9.767684 CAATGAACTTTCTGTATAATACGCAAA 57.232 29.630 0.00 0.00 0.00 3.68
40 41 8.941977 ACAATGAACTTTCTGTATAATACGCAA 58.058 29.630 0.00 0.00 0.00 4.85
41 42 8.387354 CACAATGAACTTTCTGTATAATACGCA 58.613 33.333 0.00 0.00 0.00 5.24
42 43 8.388103 ACACAATGAACTTTCTGTATAATACGC 58.612 33.333 0.00 0.00 0.00 4.42
101 102 9.018582 TGAACATTTATTGACATATGGTGAACA 57.981 29.630 7.80 0.00 0.00 3.18
102 103 9.853555 TTGAACATTTATTGACATATGGTGAAC 57.146 29.630 7.80 0.00 0.00 3.18
103 104 9.853555 GTTGAACATTTATTGACATATGGTGAA 57.146 29.630 7.80 0.00 0.00 3.18
104 105 9.241919 AGTTGAACATTTATTGACATATGGTGA 57.758 29.630 7.80 0.00 0.00 4.02
105 106 9.859427 AAGTTGAACATTTATTGACATATGGTG 57.141 29.630 7.80 0.00 0.00 4.17
143 144 9.891828 GAACAACTTTCACATACATAATGAACA 57.108 29.630 0.00 0.00 39.07 3.18
144 145 9.051027 CGAACAACTTTCACATACATAATGAAC 57.949 33.333 0.00 0.00 39.07 3.18
145 146 8.233868 CCGAACAACTTTCACATACATAATGAA 58.766 33.333 0.00 0.00 39.07 2.57
146 147 7.389330 ACCGAACAACTTTCACATACATAATGA 59.611 33.333 0.00 0.00 39.07 2.57
147 148 7.481483 CACCGAACAACTTTCACATACATAATG 59.519 37.037 0.00 0.00 41.74 1.90
148 149 7.174253 ACACCGAACAACTTTCACATACATAAT 59.826 33.333 0.00 0.00 0.00 1.28
149 150 6.483974 ACACCGAACAACTTTCACATACATAA 59.516 34.615 0.00 0.00 0.00 1.90
150 151 5.992829 ACACCGAACAACTTTCACATACATA 59.007 36.000 0.00 0.00 0.00 2.29
151 152 4.819630 ACACCGAACAACTTTCACATACAT 59.180 37.500 0.00 0.00 0.00 2.29
152 153 4.193090 ACACCGAACAACTTTCACATACA 58.807 39.130 0.00 0.00 0.00 2.29
153 154 4.806342 ACACCGAACAACTTTCACATAC 57.194 40.909 0.00 0.00 0.00 2.39
154 155 8.780846 AATATACACCGAACAACTTTCACATA 57.219 30.769 0.00 0.00 0.00 2.29
155 156 7.681939 AATATACACCGAACAACTTTCACAT 57.318 32.000 0.00 0.00 0.00 3.21
156 157 7.656542 TGTAATATACACCGAACAACTTTCACA 59.343 33.333 0.00 0.00 32.89 3.58
157 158 8.020861 TGTAATATACACCGAACAACTTTCAC 57.979 34.615 0.00 0.00 32.89 3.18
158 159 8.604640 TTGTAATATACACCGAACAACTTTCA 57.395 30.769 0.00 0.00 38.63 2.69
159 160 9.881529 TTTTGTAATATACACCGAACAACTTTC 57.118 29.630 0.00 0.00 38.63 2.62
220 221 9.617523 AGAACAAATTTGGAGAAAATGTGATTT 57.382 25.926 21.74 2.23 43.63 2.17
221 222 9.264719 GAGAACAAATTTGGAGAAAATGTGATT 57.735 29.630 21.74 2.65 43.63 2.57
222 223 7.596248 CGAGAACAAATTTGGAGAAAATGTGAT 59.404 33.333 21.74 0.00 43.63 3.06
223 224 6.917477 CGAGAACAAATTTGGAGAAAATGTGA 59.083 34.615 21.74 0.00 43.63 3.58
224 225 6.346040 GCGAGAACAAATTTGGAGAAAATGTG 60.346 38.462 21.74 0.46 45.56 3.21
225 226 5.691754 GCGAGAACAAATTTGGAGAAAATGT 59.308 36.000 21.74 0.00 38.52 2.71
226 227 5.922544 AGCGAGAACAAATTTGGAGAAAATG 59.077 36.000 21.74 5.55 38.52 2.32
227 228 6.089249 AGCGAGAACAAATTTGGAGAAAAT 57.911 33.333 21.74 0.99 40.32 1.82
228 229 5.514274 AGCGAGAACAAATTTGGAGAAAA 57.486 34.783 21.74 0.00 0.00 2.29
229 230 5.514274 AAGCGAGAACAAATTTGGAGAAA 57.486 34.783 21.74 0.00 0.00 2.52
230 231 5.514274 AAAGCGAGAACAAATTTGGAGAA 57.486 34.783 21.74 0.00 0.00 2.87
231 232 6.627395 TTAAAGCGAGAACAAATTTGGAGA 57.373 33.333 21.74 0.00 0.00 3.71
232 233 7.382218 ACATTTAAAGCGAGAACAAATTTGGAG 59.618 33.333 21.74 9.13 0.00 3.86
233 234 7.206687 ACATTTAAAGCGAGAACAAATTTGGA 58.793 30.769 21.74 0.00 0.00 3.53
234 235 7.406799 ACATTTAAAGCGAGAACAAATTTGG 57.593 32.000 21.74 5.19 0.00 3.28
235 236 9.701355 AAAACATTTAAAGCGAGAACAAATTTG 57.299 25.926 16.67 16.67 0.00 2.32
265 266 9.820725 TGAAAATGTGAACAGATTTCAAATTCT 57.179 25.926 17.80 0.00 39.98 2.40
270 271 8.768957 TGTTTGAAAATGTGAACAGATTTCAA 57.231 26.923 22.81 22.81 44.52 2.69
271 272 8.945481 ATGTTTGAAAATGTGAACAGATTTCA 57.055 26.923 16.85 16.85 40.58 2.69
312 313 9.971922 CTTGGAGAAACTATGACAAAAATTTCT 57.028 29.630 0.00 6.93 38.70 2.52
313 314 9.965824 TCTTGGAGAAACTATGACAAAAATTTC 57.034 29.630 0.00 0.00 0.00 2.17
317 318 9.748708 CATTTCTTGGAGAAACTATGACAAAAA 57.251 29.630 5.34 0.00 45.83 1.94
318 319 8.912988 ACATTTCTTGGAGAAACTATGACAAAA 58.087 29.630 5.34 0.00 45.83 2.44
319 320 8.463930 ACATTTCTTGGAGAAACTATGACAAA 57.536 30.769 5.34 0.00 45.83 2.83
320 321 8.352201 CAACATTTCTTGGAGAAACTATGACAA 58.648 33.333 5.34 0.00 45.83 3.18
321 322 7.719193 TCAACATTTCTTGGAGAAACTATGACA 59.281 33.333 5.34 0.00 45.83 3.58
322 323 8.099364 TCAACATTTCTTGGAGAAACTATGAC 57.901 34.615 5.34 0.00 45.83 3.06
323 324 8.690203 TTCAACATTTCTTGGAGAAACTATGA 57.310 30.769 5.34 7.28 45.83 2.15
324 325 9.918630 ATTTCAACATTTCTTGGAGAAACTATG 57.081 29.630 5.34 3.77 45.83 2.23
327 328 9.671279 AAAATTTCAACATTTCTTGGAGAAACT 57.329 25.926 5.34 0.00 45.83 2.66
330 331 9.664332 TCAAAAATTTCAACATTTCTTGGAGAA 57.336 25.926 0.00 0.00 31.28 2.87
331 332 9.316730 CTCAAAAATTTCAACATTTCTTGGAGA 57.683 29.630 0.00 0.00 0.00 3.71
332 333 9.316730 TCTCAAAAATTTCAACATTTCTTGGAG 57.683 29.630 0.00 0.00 0.00 3.86
333 334 9.664332 TTCTCAAAAATTTCAACATTTCTTGGA 57.336 25.926 0.00 0.00 0.00 3.53
341 342 9.540431 CGTTGTTTTTCTCAAAAATTTCAACAT 57.460 25.926 17.55 0.00 41.85 2.71
342 343 8.012241 CCGTTGTTTTTCTCAAAAATTTCAACA 58.988 29.630 17.55 3.84 41.85 3.33
343 344 8.224437 TCCGTTGTTTTTCTCAAAAATTTCAAC 58.776 29.630 12.19 12.19 41.85 3.18
344 345 8.311650 TCCGTTGTTTTTCTCAAAAATTTCAA 57.688 26.923 0.00 0.00 41.85 2.69
345 346 7.891183 TCCGTTGTTTTTCTCAAAAATTTCA 57.109 28.000 0.00 0.00 41.85 2.69
346 347 8.817100 AGATCCGTTGTTTTTCTCAAAAATTTC 58.183 29.630 0.00 0.00 41.85 2.17
347 348 8.603181 CAGATCCGTTGTTTTTCTCAAAAATTT 58.397 29.630 0.00 0.00 41.85 1.82
348 349 7.254421 GCAGATCCGTTGTTTTTCTCAAAAATT 60.254 33.333 0.00 0.00 41.85 1.82
349 350 6.200854 GCAGATCCGTTGTTTTTCTCAAAAAT 59.799 34.615 0.00 0.00 41.85 1.82
350 351 5.518487 GCAGATCCGTTGTTTTTCTCAAAAA 59.482 36.000 0.00 0.00 37.99 1.94
351 352 5.040635 GCAGATCCGTTGTTTTTCTCAAAA 58.959 37.500 0.00 0.00 0.00 2.44
352 353 4.499019 GGCAGATCCGTTGTTTTTCTCAAA 60.499 41.667 0.00 0.00 0.00 2.69
353 354 3.004315 GGCAGATCCGTTGTTTTTCTCAA 59.996 43.478 0.00 0.00 0.00 3.02
354 355 2.552315 GGCAGATCCGTTGTTTTTCTCA 59.448 45.455 0.00 0.00 0.00 3.27
355 356 2.552315 TGGCAGATCCGTTGTTTTTCTC 59.448 45.455 0.00 0.00 37.80 2.87
356 357 2.293399 GTGGCAGATCCGTTGTTTTTCT 59.707 45.455 0.00 0.00 37.80 2.52
357 358 2.293399 AGTGGCAGATCCGTTGTTTTTC 59.707 45.455 0.00 0.00 37.80 2.29
358 359 2.034558 CAGTGGCAGATCCGTTGTTTTT 59.965 45.455 0.00 0.00 37.80 1.94
359 360 1.608590 CAGTGGCAGATCCGTTGTTTT 59.391 47.619 0.00 0.00 37.80 2.43
360 361 1.238439 CAGTGGCAGATCCGTTGTTT 58.762 50.000 0.00 0.00 37.80 2.83
361 362 0.108585 ACAGTGGCAGATCCGTTGTT 59.891 50.000 0.00 0.00 37.80 2.83
362 363 0.973632 TACAGTGGCAGATCCGTTGT 59.026 50.000 0.00 0.00 37.63 3.32
363 364 2.093306 TTACAGTGGCAGATCCGTTG 57.907 50.000 0.00 0.00 37.80 4.10
364 365 2.851263 TTTACAGTGGCAGATCCGTT 57.149 45.000 0.00 0.00 37.80 4.44
365 366 2.851263 TTTTACAGTGGCAGATCCGT 57.149 45.000 0.00 0.00 37.80 4.69
366 367 4.701956 AATTTTTACAGTGGCAGATCCG 57.298 40.909 0.00 0.00 37.80 4.18
367 368 8.303876 TCTAAAAATTTTTACAGTGGCAGATCC 58.696 33.333 17.45 0.00 0.00 3.36
368 369 9.691362 TTCTAAAAATTTTTACAGTGGCAGATC 57.309 29.630 17.45 0.00 0.00 2.75
369 370 9.476202 GTTCTAAAAATTTTTACAGTGGCAGAT 57.524 29.630 17.45 0.00 0.00 2.90
370 371 8.470805 TGTTCTAAAAATTTTTACAGTGGCAGA 58.529 29.630 17.45 10.76 0.00 4.26
371 372 8.641499 TGTTCTAAAAATTTTTACAGTGGCAG 57.359 30.769 17.45 8.84 0.00 4.85
372 373 9.606631 ATTGTTCTAAAAATTTTTACAGTGGCA 57.393 25.926 17.45 9.77 0.00 4.92
386 387 9.959721 AGTTATAGAGGCAGATTGTTCTAAAAA 57.040 29.630 0.00 0.00 0.00 1.94
389 390 9.422681 AGTAGTTATAGAGGCAGATTGTTCTAA 57.577 33.333 0.00 0.00 0.00 2.10
390 391 8.998277 AGTAGTTATAGAGGCAGATTGTTCTA 57.002 34.615 0.00 0.00 0.00 2.10
391 392 7.906199 AGTAGTTATAGAGGCAGATTGTTCT 57.094 36.000 0.00 0.00 0.00 3.01
392 393 8.852135 AGTAGTAGTTATAGAGGCAGATTGTTC 58.148 37.037 0.00 0.00 0.00 3.18
393 394 8.770010 AGTAGTAGTTATAGAGGCAGATTGTT 57.230 34.615 0.00 0.00 0.00 2.83
394 395 8.770010 AAGTAGTAGTTATAGAGGCAGATTGT 57.230 34.615 0.00 0.00 0.00 2.71
408 409 8.598075 GCAGCGCTAAATTTTAAGTAGTAGTTA 58.402 33.333 10.99 0.00 0.00 2.24
409 410 7.461918 GCAGCGCTAAATTTTAAGTAGTAGTT 58.538 34.615 10.99 0.00 0.00 2.24
410 411 6.237755 CGCAGCGCTAAATTTTAAGTAGTAGT 60.238 38.462 10.99 0.00 0.00 2.73
411 412 6.120812 CGCAGCGCTAAATTTTAAGTAGTAG 58.879 40.000 10.99 0.00 0.00 2.57
412 413 5.577945 ACGCAGCGCTAAATTTTAAGTAGTA 59.422 36.000 16.61 0.00 0.00 1.82
413 414 4.390909 ACGCAGCGCTAAATTTTAAGTAGT 59.609 37.500 16.61 0.00 0.00 2.73
414 415 4.893795 ACGCAGCGCTAAATTTTAAGTAG 58.106 39.130 16.61 0.00 0.00 2.57
415 416 4.932268 ACGCAGCGCTAAATTTTAAGTA 57.068 36.364 16.61 0.00 0.00 2.24
416 417 3.824414 ACGCAGCGCTAAATTTTAAGT 57.176 38.095 16.61 0.00 0.00 2.24
417 418 5.494863 AAAACGCAGCGCTAAATTTTAAG 57.505 34.783 16.61 0.00 0.00 1.85
418 419 5.342791 GGTAAAACGCAGCGCTAAATTTTAA 59.657 36.000 22.93 11.81 0.00 1.52
419 420 4.852650 GGTAAAACGCAGCGCTAAATTTTA 59.147 37.500 16.61 17.16 0.00 1.52
420 421 3.671459 GGTAAAACGCAGCGCTAAATTTT 59.329 39.130 16.61 18.17 0.00 1.82
421 422 3.239254 GGTAAAACGCAGCGCTAAATTT 58.761 40.909 16.61 11.90 0.00 1.82
422 423 2.226912 TGGTAAAACGCAGCGCTAAATT 59.773 40.909 16.61 0.65 0.00 1.82
423 424 1.807742 TGGTAAAACGCAGCGCTAAAT 59.192 42.857 16.61 0.00 0.00 1.40
424 425 1.069771 GTGGTAAAACGCAGCGCTAAA 60.070 47.619 16.61 0.00 0.00 1.85
425 426 0.513820 GTGGTAAAACGCAGCGCTAA 59.486 50.000 16.61 0.00 0.00 3.09
426 427 1.619526 CGTGGTAAAACGCAGCGCTA 61.620 55.000 16.61 0.69 36.65 4.26
427 428 2.943653 GTGGTAAAACGCAGCGCT 59.056 55.556 16.61 2.64 0.00 5.92
428 429 2.498887 CGTGGTAAAACGCAGCGC 60.499 61.111 16.61 0.00 36.65 5.92
429 430 2.172419 CCGTGGTAAAACGCAGCG 59.828 61.111 14.82 14.82 42.23 5.18
430 431 2.127003 GCCGTGGTAAAACGCAGC 60.127 61.111 0.00 0.00 42.23 5.25
431 432 1.206578 CTGCCGTGGTAAAACGCAG 59.793 57.895 0.00 0.00 42.23 5.18
432 433 1.227586 TCTGCCGTGGTAAAACGCA 60.228 52.632 0.00 0.00 42.23 5.24
433 434 1.205820 GTCTGCCGTGGTAAAACGC 59.794 57.895 0.00 0.00 42.23 4.84
434 435 1.070175 CAAGTCTGCCGTGGTAAAACG 60.070 52.381 0.00 0.00 43.20 3.60
435 436 1.334689 GCAAGTCTGCCGTGGTAAAAC 60.335 52.381 0.00 0.00 43.26 2.43
436 437 0.948678 GCAAGTCTGCCGTGGTAAAA 59.051 50.000 0.00 0.00 43.26 1.52
437 438 2.624169 GCAAGTCTGCCGTGGTAAA 58.376 52.632 0.00 0.00 43.26 2.01
438 439 4.371975 GCAAGTCTGCCGTGGTAA 57.628 55.556 0.00 0.00 43.26 2.85
447 448 1.530852 CGAGTCGAGCTAGCAAGTCTG 60.531 57.143 18.83 7.14 0.00 3.51
448 449 0.730265 CGAGTCGAGCTAGCAAGTCT 59.270 55.000 18.83 12.69 0.00 3.24
449 450 0.727970 TCGAGTCGAGCTAGCAAGTC 59.272 55.000 18.83 12.65 0.00 3.01
450 451 0.448593 GTCGAGTCGAGCTAGCAAGT 59.551 55.000 17.12 4.61 36.23 3.16
451 452 0.730265 AGTCGAGTCGAGCTAGCAAG 59.270 55.000 17.12 10.35 36.23 4.01
452 453 0.727970 GAGTCGAGTCGAGCTAGCAA 59.272 55.000 17.12 0.00 36.23 3.91
453 454 1.422179 CGAGTCGAGTCGAGCTAGCA 61.422 60.000 33.61 0.00 42.85 3.49
454 455 1.146957 TCGAGTCGAGTCGAGCTAGC 61.147 60.000 34.99 6.62 43.91 3.42
455 456 2.960682 TCGAGTCGAGTCGAGCTAG 58.039 57.895 34.99 15.36 43.91 3.42
463 464 1.210870 GATAGCGAGTCGAGTCGAGT 58.789 55.000 39.12 28.07 42.85 4.18
464 465 1.209998 TGATAGCGAGTCGAGTCGAG 58.790 55.000 39.12 17.26 42.85 4.04
465 466 1.326852 GTTGATAGCGAGTCGAGTCGA 59.673 52.381 39.12 23.65 42.85 4.20
466 467 1.595003 GGTTGATAGCGAGTCGAGTCG 60.595 57.143 32.92 32.92 43.08 4.18
467 468 2.108178 GGTTGATAGCGAGTCGAGTC 57.892 55.000 18.61 10.37 0.00 3.36
477 478 2.579207 TACAGAGCACGGTTGATAGC 57.421 50.000 0.00 0.00 0.00 2.97
478 479 3.319405 AGGATACAGAGCACGGTTGATAG 59.681 47.826 0.00 0.00 41.41 2.08
479 480 3.068165 CAGGATACAGAGCACGGTTGATA 59.932 47.826 0.00 0.00 41.41 2.15
480 481 2.111384 AGGATACAGAGCACGGTTGAT 58.889 47.619 0.00 0.00 41.41 2.57
481 482 1.204704 CAGGATACAGAGCACGGTTGA 59.795 52.381 0.00 0.00 41.41 3.18
482 483 1.204704 TCAGGATACAGAGCACGGTTG 59.795 52.381 0.00 0.00 41.41 3.77
483 484 1.478510 CTCAGGATACAGAGCACGGTT 59.521 52.381 0.00 0.00 43.70 4.44
484 485 1.107114 CTCAGGATACAGAGCACGGT 58.893 55.000 0.00 0.00 43.70 4.83
485 486 3.955291 CTCAGGATACAGAGCACGG 57.045 57.895 0.00 0.00 43.70 4.94
491 492 0.924090 TCCGGACCTCAGGATACAGA 59.076 55.000 0.00 0.00 35.30 3.41
492 493 1.323412 CTCCGGACCTCAGGATACAG 58.677 60.000 0.00 0.00 39.43 2.74
493 494 0.629596 ACTCCGGACCTCAGGATACA 59.370 55.000 0.00 0.00 39.43 2.29
494 495 1.682323 GAACTCCGGACCTCAGGATAC 59.318 57.143 0.00 0.00 39.43 2.24
495 496 1.569548 AGAACTCCGGACCTCAGGATA 59.430 52.381 0.00 0.00 39.43 2.59
496 497 0.336737 AGAACTCCGGACCTCAGGAT 59.663 55.000 0.00 0.00 39.43 3.24
497 498 0.997363 TAGAACTCCGGACCTCAGGA 59.003 55.000 0.00 0.00 37.89 3.86
498 499 1.104630 GTAGAACTCCGGACCTCAGG 58.895 60.000 0.00 0.00 0.00 3.86
499 500 2.018515 GAGTAGAACTCCGGACCTCAG 58.981 57.143 0.00 0.00 39.28 3.35
500 501 2.125773 GAGTAGAACTCCGGACCTCA 57.874 55.000 0.00 0.00 39.28 3.86
509 510 1.516603 GGCGTGCGGAGTAGAACTC 60.517 63.158 0.00 0.00 44.32 3.01
510 511 1.935327 GAGGCGTGCGGAGTAGAACT 61.935 60.000 0.00 0.00 0.00 3.01
511 512 1.516603 GAGGCGTGCGGAGTAGAAC 60.517 63.158 0.00 0.00 0.00 3.01
512 513 1.320344 ATGAGGCGTGCGGAGTAGAA 61.320 55.000 0.00 0.00 0.00 2.10
513 514 1.320344 AATGAGGCGTGCGGAGTAGA 61.320 55.000 0.00 0.00 0.00 2.59
514 515 0.460284 AAATGAGGCGTGCGGAGTAG 60.460 55.000 0.00 0.00 0.00 2.57
515 516 0.036765 AAAATGAGGCGTGCGGAGTA 60.037 50.000 0.00 0.00 0.00 2.59
516 517 1.298859 GAAAATGAGGCGTGCGGAGT 61.299 55.000 0.00 0.00 0.00 3.85
517 518 1.021390 AGAAAATGAGGCGTGCGGAG 61.021 55.000 0.00 0.00 0.00 4.63
518 519 0.605319 AAGAAAATGAGGCGTGCGGA 60.605 50.000 0.00 0.00 0.00 5.54
519 520 0.179189 GAAGAAAATGAGGCGTGCGG 60.179 55.000 0.00 0.00 0.00 5.69
520 521 0.516877 TGAAGAAAATGAGGCGTGCG 59.483 50.000 0.00 0.00 0.00 5.34
521 522 2.162208 TCATGAAGAAAATGAGGCGTGC 59.838 45.455 0.00 0.00 30.61 5.34
522 523 4.154737 TCTTCATGAAGAAAATGAGGCGTG 59.845 41.667 31.25 5.56 43.79 5.34
523 524 4.326826 TCTTCATGAAGAAAATGAGGCGT 58.673 39.130 31.25 0.00 43.79 5.68
524 525 4.952262 TCTTCATGAAGAAAATGAGGCG 57.048 40.909 31.25 6.17 43.79 5.52
535 536 5.200454 CGGCGAATGTAAATCTTCATGAAG 58.800 41.667 26.56 26.56 39.71 3.02
536 537 4.634004 ACGGCGAATGTAAATCTTCATGAA 59.366 37.500 16.62 8.12 0.00 2.57
537 538 4.188462 ACGGCGAATGTAAATCTTCATGA 58.812 39.130 16.62 0.00 0.00 3.07
538 539 4.536364 ACGGCGAATGTAAATCTTCATG 57.464 40.909 16.62 0.00 0.00 3.07
539 540 5.331902 CAAACGGCGAATGTAAATCTTCAT 58.668 37.500 16.62 0.00 0.00 2.57
540 541 4.717991 CAAACGGCGAATGTAAATCTTCA 58.282 39.130 16.62 0.00 0.00 3.02
541 542 3.542310 GCAAACGGCGAATGTAAATCTTC 59.458 43.478 16.62 0.00 0.00 2.87
542 543 3.498082 GCAAACGGCGAATGTAAATCTT 58.502 40.909 16.62 0.00 0.00 2.40
543 544 3.131240 GCAAACGGCGAATGTAAATCT 57.869 42.857 16.62 0.00 0.00 2.40
555 556 1.737735 GGCCTCATTTGCAAACGGC 60.738 57.895 27.87 27.87 45.13 5.68
556 557 1.444212 CGGCCTCATTTGCAAACGG 60.444 57.895 15.41 15.70 0.00 4.44
557 558 1.444212 CCGGCCTCATTTGCAAACG 60.444 57.895 15.41 12.06 0.00 3.60
558 559 1.737735 GCCGGCCTCATTTGCAAAC 60.738 57.895 18.11 0.63 0.00 2.93
559 560 2.656055 GCCGGCCTCATTTGCAAA 59.344 55.556 18.11 15.44 0.00 3.68
560 561 3.381136 GGCCGGCCTCATTTGCAA 61.381 61.111 38.76 0.00 0.00 4.08
564 565 3.879180 AAACGGGCCGGCCTCATTT 62.879 57.895 42.70 33.22 36.10 2.32
565 566 4.360405 AAACGGGCCGGCCTCATT 62.360 61.111 42.70 30.04 36.10 2.57
577 578 4.341502 CCAAGGGCACGCAAACGG 62.342 66.667 0.00 0.00 46.04 4.44
579 580 3.989787 CCCCAAGGGCACGCAAAC 61.990 66.667 0.00 0.00 35.35 2.93
589 590 1.210722 GAGTAGAGCTTTCCCCCAAGG 59.789 57.143 0.00 0.00 0.00 3.61
590 591 2.192263 AGAGTAGAGCTTTCCCCCAAG 58.808 52.381 0.00 0.00 0.00 3.61
591 592 2.305927 CAAGAGTAGAGCTTTCCCCCAA 59.694 50.000 0.00 0.00 0.00 4.12
592 593 1.909302 CAAGAGTAGAGCTTTCCCCCA 59.091 52.381 0.00 0.00 0.00 4.96
593 594 1.210722 CCAAGAGTAGAGCTTTCCCCC 59.789 57.143 0.00 0.00 0.00 5.40
594 595 2.093394 GTCCAAGAGTAGAGCTTTCCCC 60.093 54.545 0.00 0.00 0.00 4.81
595 596 2.417515 CGTCCAAGAGTAGAGCTTTCCC 60.418 54.545 0.00 0.00 0.00 3.97
596 597 2.882324 CGTCCAAGAGTAGAGCTTTCC 58.118 52.381 0.00 0.00 0.00 3.13
597 598 2.263945 GCGTCCAAGAGTAGAGCTTTC 58.736 52.381 0.00 0.00 0.00 2.62
598 599 1.618837 TGCGTCCAAGAGTAGAGCTTT 59.381 47.619 0.00 0.00 0.00 3.51
599 600 1.067495 GTGCGTCCAAGAGTAGAGCTT 60.067 52.381 0.00 0.00 0.00 3.74
600 601 0.528470 GTGCGTCCAAGAGTAGAGCT 59.472 55.000 0.00 0.00 0.00 4.09
601 602 0.798771 CGTGCGTCCAAGAGTAGAGC 60.799 60.000 0.00 0.00 0.00 4.09
602 603 0.798771 GCGTGCGTCCAAGAGTAGAG 60.799 60.000 0.00 0.00 0.00 2.43
603 604 1.211969 GCGTGCGTCCAAGAGTAGA 59.788 57.895 0.00 0.00 0.00 2.59
604 605 2.152699 CGCGTGCGTCCAAGAGTAG 61.153 63.158 6.00 0.00 34.35 2.57
605 606 2.126618 CGCGTGCGTCCAAGAGTA 60.127 61.111 6.00 0.00 34.35 2.59
606 607 3.973516 TCGCGTGCGTCCAAGAGT 61.974 61.111 14.47 0.00 40.74 3.24
607 608 3.470567 GTCGCGTGCGTCCAAGAG 61.471 66.667 14.47 0.00 40.74 2.85
642 643 2.180159 TTACTGTCGGCAAGGAGGGC 62.180 60.000 0.00 0.00 0.00 5.19
643 644 0.323629 TTTACTGTCGGCAAGGAGGG 59.676 55.000 0.00 0.00 0.00 4.30
644 645 2.178912 TTTTACTGTCGGCAAGGAGG 57.821 50.000 0.00 0.00 0.00 4.30
665 666 9.406828 GCGGTTTTCAGTTTCTTTATTCTAATT 57.593 29.630 0.00 0.00 0.00 1.40
666 667 8.027189 GGCGGTTTTCAGTTTCTTTATTCTAAT 58.973 33.333 0.00 0.00 0.00 1.73
667 668 7.364970 GGCGGTTTTCAGTTTCTTTATTCTAA 58.635 34.615 0.00 0.00 0.00 2.10
668 669 6.347888 CGGCGGTTTTCAGTTTCTTTATTCTA 60.348 38.462 0.00 0.00 0.00 2.10
669 670 5.562113 CGGCGGTTTTCAGTTTCTTTATTCT 60.562 40.000 0.00 0.00 0.00 2.40
670 671 4.615541 CGGCGGTTTTCAGTTTCTTTATTC 59.384 41.667 0.00 0.00 0.00 1.75
739 740 6.360618 CCTCCCTATATGACTTTTTGAAGCT 58.639 40.000 0.00 0.00 0.00 3.74
742 743 5.445964 GGCCTCCCTATATGACTTTTTGAA 58.554 41.667 0.00 0.00 0.00 2.69
743 744 4.444306 CGGCCTCCCTATATGACTTTTTGA 60.444 45.833 0.00 0.00 0.00 2.69
745 746 3.714798 TCGGCCTCCCTATATGACTTTTT 59.285 43.478 0.00 0.00 0.00 1.94
746 747 3.314693 TCGGCCTCCCTATATGACTTTT 58.685 45.455 0.00 0.00 0.00 2.27
747 748 2.972348 TCGGCCTCCCTATATGACTTT 58.028 47.619 0.00 0.00 0.00 2.66
748 749 2.696526 TCGGCCTCCCTATATGACTT 57.303 50.000 0.00 0.00 0.00 3.01
749 750 2.696526 TTCGGCCTCCCTATATGACT 57.303 50.000 0.00 0.00 0.00 3.41
750 751 2.832129 TCATTCGGCCTCCCTATATGAC 59.168 50.000 0.00 0.00 0.00 3.06
751 752 3.099905 CTCATTCGGCCTCCCTATATGA 58.900 50.000 0.00 0.00 0.00 2.15
752 753 3.099905 TCTCATTCGGCCTCCCTATATG 58.900 50.000 0.00 0.00 0.00 1.78
753 754 3.474798 TCTCATTCGGCCTCCCTATAT 57.525 47.619 0.00 0.00 0.00 0.86
754 755 2.992847 TCTCATTCGGCCTCCCTATA 57.007 50.000 0.00 0.00 0.00 1.31
755 756 1.905215 CATCTCATTCGGCCTCCCTAT 59.095 52.381 0.00 0.00 0.00 2.57
756 757 1.342074 CATCTCATTCGGCCTCCCTA 58.658 55.000 0.00 0.00 0.00 3.53
757 758 2.049627 GCATCTCATTCGGCCTCCCT 62.050 60.000 0.00 0.00 0.00 4.20
758 759 1.599240 GCATCTCATTCGGCCTCCC 60.599 63.158 0.00 0.00 0.00 4.30
759 760 0.883814 CTGCATCTCATTCGGCCTCC 60.884 60.000 0.00 0.00 0.00 4.30
804 830 2.480419 AGAGCGAATGACTTTTTGGACG 59.520 45.455 0.00 0.00 0.00 4.79
822 848 1.216710 GGAAGTGGCGACAGGAGAG 59.783 63.158 0.00 0.00 44.46 3.20
858 885 3.754323 TGGCGAATTTATTGAACGGTCTT 59.246 39.130 0.33 0.00 0.00 3.01
885 912 2.909965 TTTGGGCGCACTTGGGTC 60.910 61.111 12.74 0.00 0.00 4.46
891 918 2.791868 GGTTTGGTTTGGGCGCACT 61.792 57.895 12.74 0.00 0.00 4.40
941 968 2.821366 GCGGTGGTGGATCTGCTG 60.821 66.667 0.00 0.00 33.68 4.41
979 1011 1.754226 GGAGATGACTGGAGACTGGTC 59.246 57.143 0.00 0.00 35.46 4.02
987 1019 1.825341 CGCCATGGAGATGACTGGA 59.175 57.895 18.40 0.00 0.00 3.86
988 1020 1.890979 GCGCCATGGAGATGACTGG 60.891 63.158 20.86 0.00 0.00 4.00
990 1022 2.107750 CGCGCCATGGAGATGACT 59.892 61.111 20.86 0.00 0.00 3.41
991 1023 2.969238 CCGCGCCATGGAGATGAC 60.969 66.667 20.86 0.00 0.00 3.06
992 1024 4.240103 CCCGCGCCATGGAGATGA 62.240 66.667 20.86 0.00 0.00 2.92
1010 1042 2.442458 GGAGGAGGAGGACGGGTC 60.442 72.222 0.00 0.00 0.00 4.46
1332 1364 4.767255 GAGGTGAGCTGGCGGGTG 62.767 72.222 1.04 0.00 0.00 4.61
1438 1484 5.800941 CAGCACTAGCAGTACTACAAACTAC 59.199 44.000 0.00 0.00 45.49 2.73
1439 1485 5.621555 GCAGCACTAGCAGTACTACAAACTA 60.622 44.000 0.00 0.00 45.49 2.24
1448 1494 2.029838 ATTGGCAGCACTAGCAGTAC 57.970 50.000 0.00 0.00 45.49 2.73
1452 1498 3.619419 TCATTTATTGGCAGCACTAGCA 58.381 40.909 0.00 0.00 45.49 3.49
1453 1499 3.629398 ACTCATTTATTGGCAGCACTAGC 59.371 43.478 0.00 0.00 42.56 3.42
1495 1544 1.022735 CAGGATGATGAACTGCAGGC 58.977 55.000 19.93 10.32 39.69 4.85
1533 1587 9.206870 CTCACAATTTTATTTGCCAAATACACT 57.793 29.630 9.35 0.00 33.32 3.55
1534 1588 8.987890 ACTCACAATTTTATTTGCCAAATACAC 58.012 29.630 9.35 0.00 33.32 2.90
1592 1653 2.833338 TCCTTCCAAATCAAGCAATGGG 59.167 45.455 0.00 0.00 33.66 4.00
1616 1683 2.197324 TGCAGTGAAACCACCCCC 59.803 61.111 0.00 0.00 37.80 5.40
1656 1723 6.997655 TCACAGATAAGATAATCATCGCCTT 58.002 36.000 0.00 0.00 36.20 4.35
1657 1724 6.596309 TCACAGATAAGATAATCATCGCCT 57.404 37.500 0.00 0.00 36.20 5.52
1668 1736 6.881602 GGTTCCAGAAACTTCACAGATAAGAT 59.118 38.462 0.00 0.00 38.02 2.40
1721 1797 6.847421 AGCTTCCAGAATCTAAAGCAAATT 57.153 33.333 23.01 7.41 45.08 1.82
1731 1807 2.157738 GCACACAAGCTTCCAGAATCT 58.842 47.619 0.00 0.00 0.00 2.40
1732 1808 2.157738 AGCACACAAGCTTCCAGAATC 58.842 47.619 0.00 0.00 43.70 2.52
1733 1809 2.283145 AGCACACAAGCTTCCAGAAT 57.717 45.000 0.00 0.00 43.70 2.40
1734 1810 3.806941 AGCACACAAGCTTCCAGAA 57.193 47.368 0.00 0.00 43.70 3.02
1803 1884 6.438259 TTTATCCACGTGAAACAGAAAACA 57.562 33.333 19.30 0.00 35.74 2.83
1805 1886 7.860373 CAGATTTTATCCACGTGAAACAGAAAA 59.140 33.333 19.30 13.16 35.74 2.29
1807 1888 6.072728 CCAGATTTTATCCACGTGAAACAGAA 60.073 38.462 19.30 4.96 35.74 3.02
1808 1889 5.411361 CCAGATTTTATCCACGTGAAACAGA 59.589 40.000 19.30 5.40 35.74 3.41
1810 1891 4.083003 GCCAGATTTTATCCACGTGAAACA 60.083 41.667 19.30 1.86 35.74 2.83
1811 1892 4.156008 AGCCAGATTTTATCCACGTGAAAC 59.844 41.667 19.30 1.36 0.00 2.78
1814 1895 3.627395 AGCCAGATTTTATCCACGTGA 57.373 42.857 19.30 3.36 0.00 4.35
1827 1983 3.093057 AGACACTACGAGAAAGCCAGAT 58.907 45.455 0.00 0.00 0.00 2.90
1857 2013 2.753452 GACCCGATAGTGAGTGAGTGAA 59.247 50.000 0.00 0.00 0.00 3.18
1863 2019 2.427095 TCACATGACCCGATAGTGAGTG 59.573 50.000 0.00 0.00 34.59 3.51
1864 2020 2.690497 CTCACATGACCCGATAGTGAGT 59.310 50.000 11.55 0.00 46.72 3.41
1897 2053 2.029288 CGCGCACCAGTTCACTGAT 61.029 57.895 8.75 0.00 46.59 2.90
1901 2057 1.772063 AAGAACGCGCACCAGTTCAC 61.772 55.000 22.27 3.39 46.54 3.18
1939 2095 1.195115 AAATCAGCGACTCCTGGCTA 58.805 50.000 0.00 0.00 37.41 3.93
1940 2096 1.137872 CTAAATCAGCGACTCCTGGCT 59.862 52.381 0.00 0.00 40.90 4.75
1941 2097 1.137086 TCTAAATCAGCGACTCCTGGC 59.863 52.381 0.00 0.00 33.64 4.85
1942 2098 2.482142 GGTCTAAATCAGCGACTCCTGG 60.482 54.545 0.00 0.00 33.64 4.45
1943 2099 2.166459 TGGTCTAAATCAGCGACTCCTG 59.834 50.000 0.00 0.00 0.00 3.86
1944 2100 2.428890 CTGGTCTAAATCAGCGACTCCT 59.571 50.000 0.00 0.00 0.00 3.69
1945 2101 2.482142 CCTGGTCTAAATCAGCGACTCC 60.482 54.545 0.00 0.00 0.00 3.85
1946 2102 2.166664 ACCTGGTCTAAATCAGCGACTC 59.833 50.000 0.00 0.00 0.00 3.36
1947 2103 2.166664 GACCTGGTCTAAATCAGCGACT 59.833 50.000 19.53 0.00 0.00 4.18
1948 2104 2.541556 GACCTGGTCTAAATCAGCGAC 58.458 52.381 19.53 0.00 0.00 5.19
1949 2105 1.134367 CGACCTGGTCTAAATCAGCGA 59.866 52.381 23.49 0.00 0.00 4.93
1950 2106 1.135083 ACGACCTGGTCTAAATCAGCG 60.135 52.381 23.49 10.78 0.00 5.18
1951 2107 2.271800 CACGACCTGGTCTAAATCAGC 58.728 52.381 23.49 0.00 0.00 4.26
1952 2108 3.193691 AGACACGACCTGGTCTAAATCAG 59.806 47.826 23.49 9.36 42.30 2.90
1953 2109 3.162666 AGACACGACCTGGTCTAAATCA 58.837 45.455 23.49 0.00 42.30 2.57
1954 2110 3.192844 TGAGACACGACCTGGTCTAAATC 59.807 47.826 23.49 15.01 44.03 2.17
1957 2113 1.884579 GTGAGACACGACCTGGTCTAA 59.115 52.381 23.49 0.00 44.03 2.10
1958 2114 1.531423 GTGAGACACGACCTGGTCTA 58.469 55.000 23.49 0.02 44.03 2.59
1959 2115 1.179814 GGTGAGACACGACCTGGTCT 61.180 60.000 23.49 6.02 46.51 3.85
1961 2117 2.561956 CGGTGAGACACGACCTGGT 61.562 63.158 0.00 0.00 34.83 4.00
1962 2118 1.802337 TTCGGTGAGACACGACCTGG 61.802 60.000 0.00 0.00 39.04 4.45
1963 2119 0.663568 GTTCGGTGAGACACGACCTG 60.664 60.000 0.00 0.00 39.04 4.00
1966 2122 2.362800 GCGTTCGGTGAGACACGAC 61.363 63.158 0.00 0.00 39.04 4.34
1968 2124 2.354188 TGCGTTCGGTGAGACACG 60.354 61.111 0.00 0.00 36.86 4.49
1969 2125 1.149361 TTGTGCGTTCGGTGAGACAC 61.149 55.000 0.00 0.00 0.00 3.67
1972 2128 0.179094 AACTTGTGCGTTCGGTGAGA 60.179 50.000 0.00 0.00 0.00 3.27
1973 2129 0.042188 CAACTTGTGCGTTCGGTGAG 60.042 55.000 0.00 0.00 0.00 3.51
1974 2130 0.741574 ACAACTTGTGCGTTCGGTGA 60.742 50.000 0.00 0.00 0.00 4.02
1975 2131 0.588730 CACAACTTGTGCGTTCGGTG 60.589 55.000 8.97 0.00 41.89 4.94
1976 2132 1.719117 CACAACTTGTGCGTTCGGT 59.281 52.632 8.97 0.00 41.89 4.69
1977 2133 4.588084 CACAACTTGTGCGTTCGG 57.412 55.556 8.97 0.00 41.89 4.30
2009 2170 1.000171 CAAGCCTCCAAAAGCAAGTCC 60.000 52.381 0.00 0.00 0.00 3.85
2012 2173 5.643379 TTATACAAGCCTCCAAAAGCAAG 57.357 39.130 0.00 0.00 0.00 4.01
2031 2192 5.822519 ACTTGCATGACCGTGACATTATTAT 59.177 36.000 6.60 0.00 0.00 1.28
2033 2194 4.009675 ACTTGCATGACCGTGACATTATT 58.990 39.130 6.60 0.00 0.00 1.40
2035 2196 3.000041 GACTTGCATGACCGTGACATTA 59.000 45.455 6.60 0.00 0.00 1.90
2038 2199 0.943835 CGACTTGCATGACCGTGACA 60.944 55.000 6.60 0.00 0.00 3.58
2082 2243 7.198306 ACAAATTTATTCGGACGAAGAAAGT 57.802 32.000 24.79 21.48 44.75 2.66
2083 2244 6.741358 GGACAAATTTATTCGGACGAAGAAAG 59.259 38.462 24.79 16.90 44.75 2.62
2086 2247 4.632688 GGGACAAATTTATTCGGACGAAGA 59.367 41.667 12.88 5.48 37.56 2.87
2087 2248 4.393680 TGGGACAAATTTATTCGGACGAAG 59.606 41.667 12.88 0.34 34.04 3.79
2088 2249 4.325119 TGGGACAAATTTATTCGGACGAA 58.675 39.130 9.75 9.75 34.81 3.85
2089 2250 3.940319 TGGGACAAATTTATTCGGACGA 58.060 40.909 0.00 0.00 31.92 4.20
2104 2265 4.728772 ACATGAAGAACAAGATTGGGACA 58.271 39.130 0.00 0.00 0.00 4.02
2105 2266 5.464168 CAACATGAAGAACAAGATTGGGAC 58.536 41.667 0.00 0.00 0.00 4.46
2106 2267 4.523943 CCAACATGAAGAACAAGATTGGGA 59.476 41.667 0.00 0.00 36.27 4.37
2107 2268 4.523943 TCCAACATGAAGAACAAGATTGGG 59.476 41.667 0.00 0.00 38.36 4.12
2108 2269 5.710513 TCCAACATGAAGAACAAGATTGG 57.289 39.130 0.00 0.00 38.76 3.16
2109 2270 9.865321 ATATTTCCAACATGAAGAACAAGATTG 57.135 29.630 0.00 0.00 0.00 2.67
2190 2351 9.900710 CGTATGATTAGTTTAATCTCTGCTACT 57.099 33.333 9.48 0.00 43.79 2.57
2191 2352 9.894783 TCGTATGATTAGTTTAATCTCTGCTAC 57.105 33.333 9.48 4.48 43.79 3.58
2193 2354 9.250624 GTTCGTATGATTAGTTTAATCTCTGCT 57.749 33.333 9.48 0.00 43.79 4.24
2194 2355 9.250624 AGTTCGTATGATTAGTTTAATCTCTGC 57.749 33.333 9.48 2.17 43.79 4.26
2202 2363 9.622004 GCTATGCTAGTTCGTATGATTAGTTTA 57.378 33.333 0.00 0.60 0.00 2.01
2203 2364 8.141909 TGCTATGCTAGTTCGTATGATTAGTTT 58.858 33.333 0.00 0.00 0.00 2.66
2204 2365 7.658261 TGCTATGCTAGTTCGTATGATTAGTT 58.342 34.615 0.00 0.01 0.00 2.24
2205 2366 7.175119 TCTGCTATGCTAGTTCGTATGATTAGT 59.825 37.037 0.00 0.00 0.00 2.24
2206 2367 7.530863 TCTGCTATGCTAGTTCGTATGATTAG 58.469 38.462 0.00 0.00 0.00 1.73
2207 2368 7.448748 TCTGCTATGCTAGTTCGTATGATTA 57.551 36.000 0.00 0.00 0.00 1.75
2208 2369 6.332735 TCTGCTATGCTAGTTCGTATGATT 57.667 37.500 0.00 0.00 0.00 2.57
2209 2370 5.966742 TCTGCTATGCTAGTTCGTATGAT 57.033 39.130 0.00 0.00 0.00 2.45
2210 2371 5.473504 TCATCTGCTATGCTAGTTCGTATGA 59.526 40.000 0.00 0.00 0.00 2.15
2211 2372 5.703876 TCATCTGCTATGCTAGTTCGTATG 58.296 41.667 0.00 0.00 0.00 2.39
2212 2373 5.966742 TCATCTGCTATGCTAGTTCGTAT 57.033 39.130 0.00 0.00 0.00 3.06
2213 2374 5.067283 TGTTCATCTGCTATGCTAGTTCGTA 59.933 40.000 0.00 0.00 0.00 3.43
2214 2375 4.142160 TGTTCATCTGCTATGCTAGTTCGT 60.142 41.667 0.00 0.00 0.00 3.85
2215 2376 4.363138 TGTTCATCTGCTATGCTAGTTCG 58.637 43.478 0.00 0.00 0.00 3.95
2216 2377 5.595885 TCTGTTCATCTGCTATGCTAGTTC 58.404 41.667 0.00 0.00 0.00 3.01
2217 2378 5.604758 TCTGTTCATCTGCTATGCTAGTT 57.395 39.130 0.00 0.00 0.00 2.24
2218 2379 5.303845 TGATCTGTTCATCTGCTATGCTAGT 59.696 40.000 0.00 0.00 0.00 2.57
2219 2380 5.634439 GTGATCTGTTCATCTGCTATGCTAG 59.366 44.000 0.00 0.00 36.54 3.42
2220 2381 5.069516 TGTGATCTGTTCATCTGCTATGCTA 59.930 40.000 0.00 0.00 36.54 3.49
2221 2382 4.141779 TGTGATCTGTTCATCTGCTATGCT 60.142 41.667 0.00 0.00 36.54 3.79
2222 2383 4.124970 TGTGATCTGTTCATCTGCTATGC 58.875 43.478 0.00 0.00 36.54 3.14
2223 2384 6.224584 AGATGTGATCTGTTCATCTGCTATG 58.775 40.000 16.24 0.00 44.08 2.23
2224 2385 6.422344 AGATGTGATCTGTTCATCTGCTAT 57.578 37.500 16.24 1.13 44.08 2.97
2225 2386 5.866159 AGATGTGATCTGTTCATCTGCTA 57.134 39.130 16.24 0.00 44.08 3.49
2226 2387 4.757019 AGATGTGATCTGTTCATCTGCT 57.243 40.909 16.24 0.00 44.08 4.24
2227 2388 4.989797 CCTAGATGTGATCTGTTCATCTGC 59.010 45.833 21.42 0.00 44.95 4.26
2228 2389 5.539979 CCCTAGATGTGATCTGTTCATCTG 58.460 45.833 21.42 15.19 44.95 2.90
2229 2390 4.040217 GCCCTAGATGTGATCTGTTCATCT 59.960 45.833 18.86 18.86 46.33 2.90
2230 2391 4.202295 TGCCCTAGATGTGATCTGTTCATC 60.202 45.833 0.00 3.85 40.51 2.92
2231 2392 3.713248 TGCCCTAGATGTGATCTGTTCAT 59.287 43.478 0.00 0.00 40.51 2.57
2232 2393 3.106827 TGCCCTAGATGTGATCTGTTCA 58.893 45.455 0.00 0.00 40.51 3.18
2233 2394 3.118629 TGTGCCCTAGATGTGATCTGTTC 60.119 47.826 0.00 0.00 40.51 3.18
2234 2395 2.840038 TGTGCCCTAGATGTGATCTGTT 59.160 45.455 0.00 0.00 40.51 3.16
2235 2396 2.470990 TGTGCCCTAGATGTGATCTGT 58.529 47.619 0.00 0.00 40.51 3.41
2236 2397 3.766068 ATGTGCCCTAGATGTGATCTG 57.234 47.619 0.00 0.00 40.51 2.90
2237 2398 4.487804 AGTATGTGCCCTAGATGTGATCT 58.512 43.478 0.00 0.00 43.33 2.75
2238 2399 4.881019 AGTATGTGCCCTAGATGTGATC 57.119 45.455 0.00 0.00 0.00 2.92
2239 2400 5.645201 TCTAGTATGTGCCCTAGATGTGAT 58.355 41.667 0.00 0.00 35.82 3.06
2240 2401 5.061721 TCTAGTATGTGCCCTAGATGTGA 57.938 43.478 0.00 0.00 35.82 3.58
2241 2402 5.791336 TTCTAGTATGTGCCCTAGATGTG 57.209 43.478 0.00 0.00 39.40 3.21
2242 2403 5.661312 TGTTTCTAGTATGTGCCCTAGATGT 59.339 40.000 0.00 0.00 39.40 3.06
2243 2404 6.161855 TGTTTCTAGTATGTGCCCTAGATG 57.838 41.667 0.00 0.00 39.40 2.90
2244 2405 6.554982 TCATGTTTCTAGTATGTGCCCTAGAT 59.445 38.462 0.00 0.00 39.40 1.98
2245 2406 5.897250 TCATGTTTCTAGTATGTGCCCTAGA 59.103 40.000 0.00 0.00 38.26 2.43
2246 2407 6.161855 TCATGTTTCTAGTATGTGCCCTAG 57.838 41.667 0.00 0.00 33.46 3.02
2247 2408 6.553953 TTCATGTTTCTAGTATGTGCCCTA 57.446 37.500 0.00 0.00 0.00 3.53
2248 2409 5.435686 TTCATGTTTCTAGTATGTGCCCT 57.564 39.130 0.00 0.00 0.00 5.19
2249 2410 6.543831 AGAATTCATGTTTCTAGTATGTGCCC 59.456 38.462 8.44 0.00 31.75 5.36
2250 2411 7.559590 AGAATTCATGTTTCTAGTATGTGCC 57.440 36.000 8.44 0.00 31.75 5.01
2257 2418 9.469807 GATCGTGATAGAATTCATGTTTCTAGT 57.530 33.333 18.80 11.40 38.65 2.57
2258 2419 9.689976 AGATCGTGATAGAATTCATGTTTCTAG 57.310 33.333 18.80 10.37 38.65 2.43
2259 2420 9.684448 GAGATCGTGATAGAATTCATGTTTCTA 57.316 33.333 17.31 17.31 39.36 2.10
2260 2421 7.380870 CGAGATCGTGATAGAATTCATGTTTCT 59.619 37.037 8.44 14.90 34.79 2.52
2261 2422 7.379797 TCGAGATCGTGATAGAATTCATGTTTC 59.620 37.037 8.44 0.00 40.80 2.78
2262 2423 7.203218 TCGAGATCGTGATAGAATTCATGTTT 58.797 34.615 8.44 0.00 40.80 2.83
2263 2424 6.739112 TCGAGATCGTGATAGAATTCATGTT 58.261 36.000 8.44 0.00 40.80 2.71
2264 2425 6.319141 TCGAGATCGTGATAGAATTCATGT 57.681 37.500 8.44 0.00 40.80 3.21
2265 2426 6.638468 TGTTCGAGATCGTGATAGAATTCATG 59.362 38.462 8.44 0.00 40.80 3.07
2266 2427 6.739112 TGTTCGAGATCGTGATAGAATTCAT 58.261 36.000 8.44 0.00 40.80 2.57
2267 2428 6.131544 TGTTCGAGATCGTGATAGAATTCA 57.868 37.500 8.44 0.00 40.80 2.57
2268 2429 5.627367 CCTGTTCGAGATCGTGATAGAATTC 59.373 44.000 0.00 0.00 40.80 2.17
2269 2430 5.299531 TCCTGTTCGAGATCGTGATAGAATT 59.700 40.000 1.70 0.00 40.80 2.17
2270 2431 4.822350 TCCTGTTCGAGATCGTGATAGAAT 59.178 41.667 1.70 0.00 40.80 2.40
2271 2432 4.196971 TCCTGTTCGAGATCGTGATAGAA 58.803 43.478 1.70 0.00 40.80 2.10
2272 2433 3.805207 TCCTGTTCGAGATCGTGATAGA 58.195 45.455 1.70 0.00 40.80 1.98
2273 2434 4.553756 TTCCTGTTCGAGATCGTGATAG 57.446 45.455 1.70 1.14 40.80 2.08
2274 2435 4.578928 TCATTCCTGTTCGAGATCGTGATA 59.421 41.667 1.70 0.00 40.80 2.15
2275 2436 3.381590 TCATTCCTGTTCGAGATCGTGAT 59.618 43.478 1.70 0.00 40.80 3.06
2276 2437 2.752903 TCATTCCTGTTCGAGATCGTGA 59.247 45.455 1.70 0.00 40.80 4.35
2277 2438 3.150848 TCATTCCTGTTCGAGATCGTG 57.849 47.619 1.70 0.00 40.80 4.35
2278 2439 4.822350 TCTATCATTCCTGTTCGAGATCGT 59.178 41.667 1.70 0.00 40.80 3.73
2279 2440 5.363979 TCTATCATTCCTGTTCGAGATCG 57.636 43.478 0.00 0.00 41.45 3.69
2280 2441 7.328249 GTGATTCTATCATTCCTGTTCGAGATC 59.672 40.741 0.00 0.00 42.04 2.75
2281 2442 7.151308 GTGATTCTATCATTCCTGTTCGAGAT 58.849 38.462 0.00 0.00 42.04 2.75
2282 2443 6.096846 TGTGATTCTATCATTCCTGTTCGAGA 59.903 38.462 0.00 0.00 42.04 4.04
2283 2444 6.276091 TGTGATTCTATCATTCCTGTTCGAG 58.724 40.000 0.00 0.00 42.04 4.04
2284 2445 6.220726 TGTGATTCTATCATTCCTGTTCGA 57.779 37.500 0.00 0.00 42.04 3.71
2285 2446 7.148902 CGTATGTGATTCTATCATTCCTGTTCG 60.149 40.741 0.00 0.00 42.04 3.95
2286 2447 7.116948 CCGTATGTGATTCTATCATTCCTGTTC 59.883 40.741 0.00 0.00 42.04 3.18
2287 2448 6.931281 CCGTATGTGATTCTATCATTCCTGTT 59.069 38.462 0.00 0.00 42.04 3.16
2288 2449 6.042093 ACCGTATGTGATTCTATCATTCCTGT 59.958 38.462 0.00 0.00 42.04 4.00
2289 2450 6.459066 ACCGTATGTGATTCTATCATTCCTG 58.541 40.000 0.00 0.00 42.04 3.86
2290 2451 6.672266 ACCGTATGTGATTCTATCATTCCT 57.328 37.500 0.00 0.00 42.04 3.36
2305 2466 3.371097 CTCCCGCTGCACCGTATGT 62.371 63.158 0.00 0.00 0.00 2.29
2306 2467 2.586079 CTCCCGCTGCACCGTATG 60.586 66.667 0.00 0.00 0.00 2.39
2307 2468 4.530857 GCTCCCGCTGCACCGTAT 62.531 66.667 0.00 0.00 0.00 3.06
2328 2489 4.534141 AACGTCAACACCGGCGGT 62.534 61.111 28.83 28.83 35.62 5.68
2329 2490 4.007940 CAACGTCAACACCGGCGG 62.008 66.667 27.06 27.06 0.00 6.13
2330 2491 3.218209 GACAACGTCAACACCGGCG 62.218 63.158 0.00 0.00 32.09 6.46
2331 2492 2.629763 GACAACGTCAACACCGGC 59.370 61.111 0.00 0.00 32.09 6.13
2332 2493 2.925352 CGACAACGTCAACACCGG 59.075 61.111 0.00 0.00 32.09 5.28
2333 2494 2.244382 GCGACAACGTCAACACCG 59.756 61.111 0.00 0.00 41.98 4.94
2334 2495 2.629763 GGCGACAACGTCAACACC 59.370 61.111 0.00 0.00 44.03 4.16
2335 2496 1.503818 ATGGGCGACAACGTCAACAC 61.504 55.000 0.00 0.00 46.58 3.32
2336 2497 1.227704 ATGGGCGACAACGTCAACA 60.228 52.632 0.00 0.00 46.58 3.33
2337 2498 1.206578 CATGGGCGACAACGTCAAC 59.793 57.895 0.00 0.00 46.58 3.18
2338 2499 1.225376 GACATGGGCGACAACGTCAA 61.225 55.000 0.00 0.00 46.58 3.18
2339 2500 1.666553 GACATGGGCGACAACGTCA 60.667 57.895 0.00 0.00 46.58 4.35
2340 2501 2.726691 CGACATGGGCGACAACGTC 61.727 63.158 4.45 0.00 43.86 4.34
2341 2502 2.736995 CGACATGGGCGACAACGT 60.737 61.111 4.45 0.00 41.98 3.99
2342 2503 2.726691 GACGACATGGGCGACAACG 61.727 63.158 15.69 0.00 42.93 4.10
2343 2504 2.726691 CGACGACATGGGCGACAAC 61.727 63.158 15.69 4.97 0.00 3.32
2344 2505 2.431771 CGACGACATGGGCGACAA 60.432 61.111 15.69 0.00 0.00 3.18
2345 2506 3.336715 CTCGACGACATGGGCGACA 62.337 63.158 15.69 0.00 0.00 4.35
2346 2507 2.579787 CTCGACGACATGGGCGAC 60.580 66.667 15.69 9.34 0.00 5.19
2347 2508 3.822192 CCTCGACGACATGGGCGA 61.822 66.667 15.69 8.33 0.00 5.54
2348 2509 3.138930 ATCCTCGACGACATGGGCG 62.139 63.158 8.44 8.44 0.00 6.13
2349 2510 1.592669 CATCCTCGACGACATGGGC 60.593 63.158 0.00 0.00 0.00 5.36
2350 2511 0.031314 CTCATCCTCGACGACATGGG 59.969 60.000 10.68 5.23 0.00 4.00
2351 2512 0.031314 CCTCATCCTCGACGACATGG 59.969 60.000 10.68 4.18 0.00 3.66
2352 2513 0.741326 ACCTCATCCTCGACGACATG 59.259 55.000 0.00 0.00 0.00 3.21
2353 2514 3.192799 ACCTCATCCTCGACGACAT 57.807 52.632 0.00 0.00 0.00 3.06
2354 2515 4.736739 ACCTCATCCTCGACGACA 57.263 55.556 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.