Multiple sequence alignment - TraesCS2A01G123900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G123900 chr2A 100.000 6732 0 0 1 6732 73169478 73176209 0.000000e+00 12432.0
1 TraesCS2A01G123900 chr2D 93.086 3963 175 48 576 4485 73582967 73586883 0.000000e+00 5709.0
2 TraesCS2A01G123900 chr2D 95.408 2265 59 17 4508 6732 73586875 73589134 0.000000e+00 3565.0
3 TraesCS2A01G123900 chr2B 89.965 1425 101 23 3644 5042 111661083 111662491 0.000000e+00 1801.0
4 TraesCS2A01G123900 chr2B 89.510 877 44 23 546 1406 111657645 111658489 0.000000e+00 1066.0
5 TraesCS2A01G123900 chr2B 93.363 678 42 3 5113 5788 111662490 111663166 0.000000e+00 1000.0
6 TraesCS2A01G123900 chr2B 83.126 1126 140 31 2384 3473 111659555 111660666 0.000000e+00 981.0
7 TraesCS2A01G123900 chr2B 93.355 602 31 3 6139 6732 111663268 111663868 0.000000e+00 881.0
8 TraesCS2A01G123900 chr2B 89.580 691 58 8 1677 2361 111658813 111659495 0.000000e+00 865.0
9 TraesCS2A01G123900 chr2B 87.826 230 20 7 1467 1693 111658499 111658723 5.180000e-66 263.0
10 TraesCS2A01G123900 chr2B 88.750 80 5 4 3486 3563 111660819 111660896 2.000000e-15 95.3
11 TraesCS2A01G123900 chr3A 74.825 143 29 5 86 226 63379554 63379691 2.620000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G123900 chr2A 73169478 73176209 6731 False 12432.0000 12432 100.000000 1 6732 1 chr2A.!!$F1 6731
1 TraesCS2A01G123900 chr2D 73582967 73589134 6167 False 4637.0000 5709 94.247000 576 6732 2 chr2D.!!$F1 6156
2 TraesCS2A01G123900 chr2B 111657645 111663868 6223 False 869.0375 1801 89.434375 546 6732 8 chr2B.!!$F1 6186

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
79 80 0.033781 GCAACCCAAAGCAAGCATGA 59.966 50.000 0.00 0.0 0.00 3.07 F
420 421 0.035458 CGAGGATATTGGAGGTGGCC 59.965 60.000 0.00 0.0 0.00 5.36 F
1218 1234 0.038166 TCTCCAATGTCAACCAGGCC 59.962 55.000 0.00 0.0 0.00 5.19 F
1285 1301 0.593128 TGCTTTGCCGAGCTTTCTTC 59.407 50.000 9.46 0.0 43.11 2.87 F
1717 1841 1.003116 CTCGGCAGCTTTGATACATGC 60.003 52.381 0.00 0.0 36.16 4.06 F
1718 1842 1.019673 CGGCAGCTTTGATACATGCT 58.980 50.000 0.00 0.0 37.08 3.79 F
1719 1843 1.003116 CGGCAGCTTTGATACATGCTC 60.003 52.381 0.00 0.0 37.08 4.26 F
2586 2756 1.449070 CATGCTCTCTGAAGGCGCA 60.449 57.895 10.83 0.0 35.08 6.09 F
3268 3478 2.168313 CCTGTTTTCACTGGCTTTTGGT 59.832 45.455 0.00 0.0 35.40 3.67 F
4784 5267 0.685097 TGGGGCTATTACTGATCCGC 59.315 55.000 0.00 0.0 0.00 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2047 2177 0.235404 GCGCAATGCAAAAGGGTTTG 59.765 50.000 5.91 0.00 45.88 2.93 R
2048 2178 1.220817 CGCGCAATGCAAAAGGGTTT 61.221 50.000 8.75 0.00 46.97 3.27 R
2287 2417 1.664151 GATGGCACGTTAACTACCAGC 59.336 52.381 14.10 12.03 33.03 4.85 R
3118 3328 2.237143 TGCTAAGTAGAACCTGCATGCT 59.763 45.455 20.33 0.00 0.00 3.79 R
3384 3594 2.191128 ACCCTGAAGTTAAGCAGCAG 57.809 50.000 0.00 0.00 0.00 4.24 R
3420 3630 3.007398 GGTCAGGAGCTCCCATAACATAG 59.993 52.174 29.54 8.10 37.41 2.23 R
3538 3894 5.998363 ACTGTCCATCTTTTGAGAACCTTAC 59.002 40.000 0.00 0.00 0.00 2.34 R
4061 4524 3.188895 GTCAGCGGACATGAGTTTTTC 57.811 47.619 12.41 0.00 43.73 2.29 R
5097 5581 0.034670 AGGCTGCAGTCCCAGAAATC 60.035 55.000 16.31 0.00 34.77 2.17 R
6597 7118 0.036952 TGAAGAGAAAGAGCAGGCGG 60.037 55.000 0.00 0.00 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.093278 GCCATGGAGAAAGCGTCG 58.907 61.111 18.40 0.00 0.00 5.12
18 19 1.447838 GCCATGGAGAAAGCGTCGA 60.448 57.895 18.40 0.00 0.00 4.20
19 20 1.696832 GCCATGGAGAAAGCGTCGAC 61.697 60.000 18.40 5.18 0.00 4.20
20 21 1.413767 CCATGGAGAAAGCGTCGACG 61.414 60.000 32.57 32.57 43.27 5.12
21 22 0.456142 CATGGAGAAAGCGTCGACGA 60.456 55.000 39.74 17.86 43.02 4.20
22 23 0.456221 ATGGAGAAAGCGTCGACGAT 59.544 50.000 39.74 32.94 43.02 3.73
23 24 0.456142 TGGAGAAAGCGTCGACGATG 60.456 55.000 39.74 13.47 43.02 3.84
24 25 0.179171 GGAGAAAGCGTCGACGATGA 60.179 55.000 39.74 0.00 43.02 2.92
25 26 1.534175 GGAGAAAGCGTCGACGATGAT 60.534 52.381 39.74 26.35 43.02 2.45
26 27 1.514811 GAGAAAGCGTCGACGATGATG 59.485 52.381 39.74 11.89 43.02 3.07
27 28 1.135373 AGAAAGCGTCGACGATGATGT 60.135 47.619 39.74 22.24 43.02 3.06
28 29 2.096980 AGAAAGCGTCGACGATGATGTA 59.903 45.455 39.74 0.00 43.02 2.29
29 30 1.823828 AAGCGTCGACGATGATGTAC 58.176 50.000 39.74 19.74 43.02 2.90
30 31 0.730840 AGCGTCGACGATGATGTACA 59.269 50.000 39.74 0.00 43.02 2.90
31 32 1.333931 AGCGTCGACGATGATGTACAT 59.666 47.619 39.74 8.43 43.02 2.29
32 33 2.117137 GCGTCGACGATGATGTACATT 58.883 47.619 39.74 0.00 43.02 2.71
33 34 2.097877 GCGTCGACGATGATGTACATTG 60.098 50.000 39.74 7.55 43.85 2.82
40 41 3.057019 CGATGATGTACATTGTACCCGG 58.943 50.000 21.20 0.00 39.56 5.73
41 42 2.992124 TGATGTACATTGTACCCGGG 57.008 50.000 22.25 22.25 0.00 5.73
42 43 2.468915 TGATGTACATTGTACCCGGGA 58.531 47.619 32.02 8.25 0.00 5.14
43 44 3.042682 TGATGTACATTGTACCCGGGAT 58.957 45.455 32.02 14.63 0.00 3.85
44 45 2.992124 TGTACATTGTACCCGGGATG 57.008 50.000 32.02 22.75 0.00 3.51
45 46 1.134340 TGTACATTGTACCCGGGATGC 60.134 52.381 32.02 16.95 0.00 3.91
46 47 0.470766 TACATTGTACCCGGGATGCC 59.529 55.000 32.02 12.05 0.00 4.40
47 48 1.528309 CATTGTACCCGGGATGCCC 60.528 63.158 32.02 10.09 41.09 5.36
48 49 2.004120 ATTGTACCCGGGATGCCCA 61.004 57.895 32.02 12.80 45.83 5.36
49 50 1.360393 ATTGTACCCGGGATGCCCAT 61.360 55.000 32.02 4.78 45.83 4.00
50 51 2.113139 GTACCCGGGATGCCCATG 59.887 66.667 32.02 0.00 45.83 3.66
51 52 3.884774 TACCCGGGATGCCCATGC 61.885 66.667 32.02 0.00 45.83 4.06
53 54 4.962836 CCCGGGATGCCCATGCTC 62.963 72.222 18.48 0.00 45.83 4.26
54 55 3.882326 CCGGGATGCCCATGCTCT 61.882 66.667 0.00 0.00 45.83 4.09
55 56 2.593725 CGGGATGCCCATGCTCTG 60.594 66.667 0.00 0.00 45.83 3.35
56 57 2.921435 GGGATGCCCATGCTCTGA 59.079 61.111 0.00 0.00 44.65 3.27
57 58 1.228184 GGGATGCCCATGCTCTGAG 60.228 63.158 0.00 0.00 44.65 3.35
58 59 1.703014 GGGATGCCCATGCTCTGAGA 61.703 60.000 9.28 0.00 44.65 3.27
59 60 0.182061 GGATGCCCATGCTCTGAGAA 59.818 55.000 9.28 0.00 38.71 2.87
60 61 1.595466 GATGCCCATGCTCTGAGAAG 58.405 55.000 9.28 0.00 38.71 2.85
61 62 0.465824 ATGCCCATGCTCTGAGAAGC 60.466 55.000 9.28 0.00 42.82 3.86
68 69 3.329300 GCTCTGAGAAGCAACCCAA 57.671 52.632 9.28 0.00 42.05 4.12
69 70 1.609208 GCTCTGAGAAGCAACCCAAA 58.391 50.000 9.28 0.00 42.05 3.28
70 71 1.538950 GCTCTGAGAAGCAACCCAAAG 59.461 52.381 9.28 0.00 42.05 2.77
71 72 1.538950 CTCTGAGAAGCAACCCAAAGC 59.461 52.381 0.00 0.00 0.00 3.51
72 73 1.133823 TCTGAGAAGCAACCCAAAGCA 60.134 47.619 0.00 0.00 0.00 3.91
73 74 1.682854 CTGAGAAGCAACCCAAAGCAA 59.317 47.619 0.00 0.00 0.00 3.91
74 75 1.682854 TGAGAAGCAACCCAAAGCAAG 59.317 47.619 0.00 0.00 0.00 4.01
75 76 0.390492 AGAAGCAACCCAAAGCAAGC 59.610 50.000 0.00 0.00 0.00 4.01
76 77 0.104671 GAAGCAACCCAAAGCAAGCA 59.895 50.000 0.00 0.00 0.00 3.91
77 78 0.760572 AAGCAACCCAAAGCAAGCAT 59.239 45.000 0.00 0.00 0.00 3.79
78 79 0.034337 AGCAACCCAAAGCAAGCATG 59.966 50.000 0.00 0.00 0.00 4.06
79 80 0.033781 GCAACCCAAAGCAAGCATGA 59.966 50.000 0.00 0.00 0.00 3.07
80 81 1.787012 CAACCCAAAGCAAGCATGAC 58.213 50.000 0.00 0.00 0.00 3.06
81 82 1.068895 CAACCCAAAGCAAGCATGACA 59.931 47.619 0.00 0.00 0.00 3.58
82 83 1.636148 ACCCAAAGCAAGCATGACAT 58.364 45.000 0.00 0.00 0.00 3.06
83 84 2.806434 ACCCAAAGCAAGCATGACATA 58.194 42.857 0.00 0.00 0.00 2.29
84 85 2.493278 ACCCAAAGCAAGCATGACATAC 59.507 45.455 0.00 0.00 0.00 2.39
85 86 2.492881 CCCAAAGCAAGCATGACATACA 59.507 45.455 0.00 0.00 0.00 2.29
86 87 3.056678 CCCAAAGCAAGCATGACATACAA 60.057 43.478 0.00 0.00 0.00 2.41
87 88 3.922240 CCAAAGCAAGCATGACATACAAC 59.078 43.478 0.00 0.00 0.00 3.32
88 89 4.548494 CAAAGCAAGCATGACATACAACA 58.452 39.130 0.00 0.00 0.00 3.33
89 90 5.165676 CAAAGCAAGCATGACATACAACAT 58.834 37.500 0.00 0.00 0.00 2.71
90 91 4.627611 AGCAAGCATGACATACAACATC 57.372 40.909 0.00 0.00 0.00 3.06
91 92 4.267536 AGCAAGCATGACATACAACATCT 58.732 39.130 0.00 0.00 0.00 2.90
92 93 4.334759 AGCAAGCATGACATACAACATCTC 59.665 41.667 0.00 0.00 0.00 2.75
93 94 4.334759 GCAAGCATGACATACAACATCTCT 59.665 41.667 0.00 0.00 0.00 3.10
94 95 5.525012 GCAAGCATGACATACAACATCTCTA 59.475 40.000 0.00 0.00 0.00 2.43
95 96 6.037500 GCAAGCATGACATACAACATCTCTAA 59.962 38.462 0.00 0.00 0.00 2.10
96 97 7.414429 GCAAGCATGACATACAACATCTCTAAA 60.414 37.037 0.00 0.00 0.00 1.85
97 98 8.618677 CAAGCATGACATACAACATCTCTAAAT 58.381 33.333 0.00 0.00 0.00 1.40
98 99 8.743085 AGCATGACATACAACATCTCTAAATT 57.257 30.769 0.00 0.00 0.00 1.82
99 100 8.834465 AGCATGACATACAACATCTCTAAATTC 58.166 33.333 0.00 0.00 0.00 2.17
100 101 7.795734 GCATGACATACAACATCTCTAAATTCG 59.204 37.037 0.00 0.00 0.00 3.34
101 102 9.034544 CATGACATACAACATCTCTAAATTCGA 57.965 33.333 0.00 0.00 0.00 3.71
102 103 8.407457 TGACATACAACATCTCTAAATTCGAC 57.593 34.615 0.00 0.00 0.00 4.20
103 104 8.032451 TGACATACAACATCTCTAAATTCGACA 58.968 33.333 0.00 0.00 0.00 4.35
104 105 8.186178 ACATACAACATCTCTAAATTCGACAC 57.814 34.615 0.00 0.00 0.00 3.67
105 106 7.277981 ACATACAACATCTCTAAATTCGACACC 59.722 37.037 0.00 0.00 0.00 4.16
106 107 4.625742 ACAACATCTCTAAATTCGACACCG 59.374 41.667 0.00 0.00 37.07 4.94
107 108 3.782046 ACATCTCTAAATTCGACACCGG 58.218 45.455 0.00 0.00 36.24 5.28
108 109 2.953466 TCTCTAAATTCGACACCGGG 57.047 50.000 6.32 0.00 36.24 5.73
109 110 2.173519 TCTCTAAATTCGACACCGGGT 58.826 47.619 6.32 0.00 36.24 5.28
110 111 3.355378 TCTCTAAATTCGACACCGGGTA 58.645 45.455 6.32 0.00 36.24 3.69
111 112 3.129287 TCTCTAAATTCGACACCGGGTAC 59.871 47.826 6.32 0.00 36.24 3.34
112 113 2.159393 TCTAAATTCGACACCGGGTACG 60.159 50.000 6.32 16.23 40.55 3.67
113 114 1.015607 AAATTCGACACCGGGTACGC 61.016 55.000 6.32 0.00 39.22 4.42
114 115 2.840717 AATTCGACACCGGGTACGCC 62.841 60.000 6.32 0.00 39.22 5.68
119 120 4.789075 CACCGGGTACGCCACGAG 62.789 72.222 6.32 0.00 39.22 4.18
122 123 4.728102 CGGGTACGCCACGAGCAA 62.728 66.667 4.09 0.00 44.04 3.91
123 124 3.116531 GGGTACGCCACGAGCAAC 61.117 66.667 0.00 0.00 44.04 4.17
124 125 3.116531 GGTACGCCACGAGCAACC 61.117 66.667 0.00 0.00 44.04 3.77
125 126 2.356553 GTACGCCACGAGCAACCA 60.357 61.111 0.00 0.00 44.04 3.67
126 127 1.957186 GTACGCCACGAGCAACCAA 60.957 57.895 0.00 0.00 44.04 3.67
127 128 1.666553 TACGCCACGAGCAACCAAG 60.667 57.895 0.00 0.00 44.04 3.61
128 129 2.089887 TACGCCACGAGCAACCAAGA 62.090 55.000 0.00 0.00 44.04 3.02
129 130 2.946762 GCCACGAGCAACCAAGAC 59.053 61.111 0.00 0.00 42.97 3.01
130 131 1.891919 GCCACGAGCAACCAAGACA 60.892 57.895 0.00 0.00 42.97 3.41
131 132 1.444119 GCCACGAGCAACCAAGACAA 61.444 55.000 0.00 0.00 42.97 3.18
132 133 0.307760 CCACGAGCAACCAAGACAAC 59.692 55.000 0.00 0.00 0.00 3.32
133 134 1.013596 CACGAGCAACCAAGACAACA 58.986 50.000 0.00 0.00 0.00 3.33
134 135 1.014352 ACGAGCAACCAAGACAACAC 58.986 50.000 0.00 0.00 0.00 3.32
135 136 0.307760 CGAGCAACCAAGACAACACC 59.692 55.000 0.00 0.00 0.00 4.16
136 137 1.680338 GAGCAACCAAGACAACACCT 58.320 50.000 0.00 0.00 0.00 4.00
137 138 2.024414 GAGCAACCAAGACAACACCTT 58.976 47.619 0.00 0.00 0.00 3.50
138 139 2.024414 AGCAACCAAGACAACACCTTC 58.976 47.619 0.00 0.00 0.00 3.46
139 140 1.748493 GCAACCAAGACAACACCTTCA 59.252 47.619 0.00 0.00 0.00 3.02
140 141 2.479560 GCAACCAAGACAACACCTTCAC 60.480 50.000 0.00 0.00 0.00 3.18
141 142 2.752354 CAACCAAGACAACACCTTCACA 59.248 45.455 0.00 0.00 0.00 3.58
142 143 3.080300 ACCAAGACAACACCTTCACAA 57.920 42.857 0.00 0.00 0.00 3.33
143 144 3.426615 ACCAAGACAACACCTTCACAAA 58.573 40.909 0.00 0.00 0.00 2.83
144 145 3.829601 ACCAAGACAACACCTTCACAAAA 59.170 39.130 0.00 0.00 0.00 2.44
145 146 4.082245 ACCAAGACAACACCTTCACAAAAG 60.082 41.667 0.00 0.00 0.00 2.27
146 147 4.423732 CAAGACAACACCTTCACAAAAGG 58.576 43.478 2.29 2.29 43.05 3.11
147 148 3.963129 AGACAACACCTTCACAAAAGGA 58.037 40.909 10.68 0.00 39.81 3.36
148 149 3.947834 AGACAACACCTTCACAAAAGGAG 59.052 43.478 10.68 5.37 39.81 3.69
149 150 3.945285 GACAACACCTTCACAAAAGGAGA 59.055 43.478 10.68 0.00 39.81 3.71
150 151 4.340617 ACAACACCTTCACAAAAGGAGAA 58.659 39.130 10.68 0.00 39.81 2.87
151 152 4.770010 ACAACACCTTCACAAAAGGAGAAA 59.230 37.500 10.68 0.00 39.81 2.52
152 153 5.245075 ACAACACCTTCACAAAAGGAGAAAA 59.755 36.000 10.68 0.00 39.81 2.29
153 154 6.070824 ACAACACCTTCACAAAAGGAGAAAAT 60.071 34.615 10.68 0.00 39.81 1.82
154 155 5.906073 ACACCTTCACAAAAGGAGAAAATG 58.094 37.500 10.68 0.43 39.81 2.32
155 156 5.422012 ACACCTTCACAAAAGGAGAAAATGT 59.578 36.000 10.68 1.01 39.81 2.71
156 157 5.979517 CACCTTCACAAAAGGAGAAAATGTC 59.020 40.000 10.68 0.00 39.81 3.06
157 158 5.215160 CCTTCACAAAAGGAGAAAATGTCG 58.785 41.667 0.00 0.00 39.81 4.35
158 159 5.221048 CCTTCACAAAAGGAGAAAATGTCGT 60.221 40.000 0.00 0.00 39.81 4.34
159 160 5.168526 TCACAAAAGGAGAAAATGTCGTG 57.831 39.130 0.00 0.00 0.00 4.35
160 161 3.730715 CACAAAAGGAGAAAATGTCGTGC 59.269 43.478 0.00 0.00 0.00 5.34
161 162 3.632145 ACAAAAGGAGAAAATGTCGTGCT 59.368 39.130 0.00 0.00 0.00 4.40
162 163 3.904136 AAAGGAGAAAATGTCGTGCTG 57.096 42.857 0.00 0.00 0.00 4.41
163 164 1.160137 AGGAGAAAATGTCGTGCTGC 58.840 50.000 0.00 0.00 0.00 5.25
164 165 0.169009 GGAGAAAATGTCGTGCTGCC 59.831 55.000 0.00 0.00 0.00 4.85
165 166 0.179215 GAGAAAATGTCGTGCTGCCG 60.179 55.000 0.00 0.19 0.00 5.69
166 167 0.884704 AGAAAATGTCGTGCTGCCGT 60.885 50.000 9.66 0.00 0.00 5.68
167 168 0.040425 GAAAATGTCGTGCTGCCGTT 60.040 50.000 9.66 0.00 0.00 4.44
168 169 0.317770 AAAATGTCGTGCTGCCGTTG 60.318 50.000 9.66 0.00 0.00 4.10
169 170 2.731587 AAATGTCGTGCTGCCGTTGC 62.732 55.000 9.66 0.00 38.26 4.17
188 189 3.998672 GCCGTCCGGTCCAGTGAA 61.999 66.667 7.66 0.00 37.65 3.18
189 190 2.048503 CCGTCCGGTCCAGTGAAC 60.049 66.667 0.00 0.00 0.00 3.18
190 191 2.048503 CGTCCGGTCCAGTGAACC 60.049 66.667 0.00 0.00 0.00 3.62
191 192 2.863346 CGTCCGGTCCAGTGAACCA 61.863 63.158 0.00 0.00 36.53 3.67
192 193 1.004918 GTCCGGTCCAGTGAACCAG 60.005 63.158 0.00 0.00 36.53 4.00
193 194 1.152419 TCCGGTCCAGTGAACCAGA 60.152 57.895 0.00 0.00 36.53 3.86
194 195 0.761323 TCCGGTCCAGTGAACCAGAA 60.761 55.000 0.00 0.00 36.53 3.02
195 196 0.602905 CCGGTCCAGTGAACCAGAAC 60.603 60.000 0.00 0.00 36.53 3.01
196 197 0.393077 CGGTCCAGTGAACCAGAACT 59.607 55.000 0.00 0.00 36.53 3.01
197 198 1.616865 CGGTCCAGTGAACCAGAACTA 59.383 52.381 0.00 0.00 36.53 2.24
198 199 2.352814 CGGTCCAGTGAACCAGAACTAG 60.353 54.545 0.00 0.00 36.53 2.57
199 200 2.028020 GGTCCAGTGAACCAGAACTAGG 60.028 54.545 0.00 0.00 36.75 3.02
200 201 2.028020 GTCCAGTGAACCAGAACTAGGG 60.028 54.545 0.00 0.00 0.00 3.53
201 202 1.978580 CCAGTGAACCAGAACTAGGGT 59.021 52.381 0.00 0.00 39.65 4.34
203 204 3.181443 CCAGTGAACCAGAACTAGGGTTT 60.181 47.826 3.07 0.00 46.97 3.27
204 205 4.065789 CAGTGAACCAGAACTAGGGTTTC 58.934 47.826 3.07 0.00 46.97 2.78
205 206 3.072622 AGTGAACCAGAACTAGGGTTTCC 59.927 47.826 3.07 0.00 46.97 3.13
206 207 2.374170 TGAACCAGAACTAGGGTTTCCC 59.626 50.000 3.07 0.00 46.97 3.97
215 216 4.542075 GGGTTTCCCTCGATGCTC 57.458 61.111 0.00 0.00 41.34 4.26
216 217 1.521681 GGGTTTCCCTCGATGCTCG 60.522 63.158 0.00 0.00 41.34 5.03
217 218 1.956629 GGGTTTCCCTCGATGCTCGA 61.957 60.000 7.79 7.79 46.95 4.04
231 232 4.208426 TCGAAGAGGGGCACAAGA 57.792 55.556 0.00 0.00 0.00 3.02
232 233 2.447630 TCGAAGAGGGGCACAAGAA 58.552 52.632 0.00 0.00 0.00 2.52
233 234 0.984230 TCGAAGAGGGGCACAAGAAT 59.016 50.000 0.00 0.00 0.00 2.40
234 235 1.089920 CGAAGAGGGGCACAAGAATG 58.910 55.000 0.00 0.00 0.00 2.67
235 236 0.813821 GAAGAGGGGCACAAGAATGC 59.186 55.000 0.00 0.00 45.34 3.56
246 247 3.924686 GCACAAGAATGCATCAAAGAAGG 59.075 43.478 0.00 0.00 45.39 3.46
247 248 4.491676 CACAAGAATGCATCAAAGAAGGG 58.508 43.478 0.00 0.00 0.00 3.95
248 249 3.512724 ACAAGAATGCATCAAAGAAGGGG 59.487 43.478 0.00 0.00 0.00 4.79
249 250 3.744940 AGAATGCATCAAAGAAGGGGA 57.255 42.857 0.00 0.00 0.00 4.81
250 251 3.359950 AGAATGCATCAAAGAAGGGGAC 58.640 45.455 0.00 0.00 0.00 4.46
251 252 1.755179 ATGCATCAAAGAAGGGGACG 58.245 50.000 0.00 0.00 0.00 4.79
252 253 0.690192 TGCATCAAAGAAGGGGACGA 59.310 50.000 0.00 0.00 0.00 4.20
253 254 1.087501 GCATCAAAGAAGGGGACGAC 58.912 55.000 0.00 0.00 0.00 4.34
254 255 1.610624 GCATCAAAGAAGGGGACGACA 60.611 52.381 0.00 0.00 0.00 4.35
255 256 2.076863 CATCAAAGAAGGGGACGACAC 58.923 52.381 0.00 0.00 0.00 3.67
256 257 0.395312 TCAAAGAAGGGGACGACACC 59.605 55.000 0.00 0.00 40.50 4.16
264 265 1.683418 GGGGACGACACCCATAGGTC 61.683 65.000 15.91 0.00 46.45 3.85
265 266 0.974010 GGGACGACACCCATAGGTCA 60.974 60.000 10.97 0.00 46.45 4.02
266 267 0.175073 GGACGACACCCATAGGTCAC 59.825 60.000 0.00 0.00 46.45 3.67
267 268 0.179145 GACGACACCCATAGGTCACG 60.179 60.000 0.00 4.64 46.45 4.35
268 269 1.518572 CGACACCCATAGGTCACGC 60.519 63.158 0.00 0.00 46.45 5.34
269 270 1.153429 GACACCCATAGGTCACGCC 60.153 63.158 0.00 0.00 46.45 5.68
270 271 2.202878 CACCCATAGGTCACGCCG 60.203 66.667 0.00 0.00 46.45 6.46
271 272 4.157120 ACCCATAGGTCACGCCGC 62.157 66.667 0.00 0.00 46.45 6.53
272 273 3.849951 CCCATAGGTCACGCCGCT 61.850 66.667 0.00 0.00 43.70 5.52
273 274 2.586079 CCATAGGTCACGCCGCTG 60.586 66.667 0.00 0.00 43.70 5.18
274 275 3.264897 CATAGGTCACGCCGCTGC 61.265 66.667 0.00 0.00 43.70 5.25
275 276 4.530857 ATAGGTCACGCCGCTGCC 62.531 66.667 0.00 0.00 43.70 4.85
280 281 4.471908 TCACGCCGCTGCCATCAT 62.472 61.111 0.00 0.00 0.00 2.45
281 282 3.945434 CACGCCGCTGCCATCATC 61.945 66.667 0.00 0.00 0.00 2.92
292 293 2.924185 CCATCATCGGCAAGCCTAG 58.076 57.895 9.73 0.00 0.00 3.02
293 294 1.233285 CCATCATCGGCAAGCCTAGC 61.233 60.000 9.73 0.00 0.00 3.42
294 295 0.533531 CATCATCGGCAAGCCTAGCA 60.534 55.000 9.73 0.00 0.00 3.49
295 296 0.250209 ATCATCGGCAAGCCTAGCAG 60.250 55.000 9.73 0.00 0.00 4.24
296 297 1.890979 CATCGGCAAGCCTAGCAGG 60.891 63.158 9.73 0.00 38.80 4.85
297 298 3.112205 ATCGGCAAGCCTAGCAGGG 62.112 63.158 9.73 0.00 35.37 4.45
298 299 3.785859 CGGCAAGCCTAGCAGGGA 61.786 66.667 9.73 0.00 35.37 4.20
299 300 2.922234 GGCAAGCCTAGCAGGGAT 59.078 61.111 3.29 0.00 35.37 3.85
300 301 1.228094 GGCAAGCCTAGCAGGGATC 60.228 63.158 3.29 0.00 35.37 3.36
301 302 1.596477 GCAAGCCTAGCAGGGATCG 60.596 63.158 4.65 0.00 35.37 3.69
302 303 1.826024 CAAGCCTAGCAGGGATCGT 59.174 57.895 4.65 0.00 35.37 3.73
303 304 0.249657 CAAGCCTAGCAGGGATCGTC 60.250 60.000 4.65 0.00 35.37 4.20
304 305 1.739338 AAGCCTAGCAGGGATCGTCG 61.739 60.000 4.65 0.00 35.37 5.12
305 306 2.336809 CCTAGCAGGGATCGTCGC 59.663 66.667 0.00 0.00 0.00 5.19
306 307 2.050895 CTAGCAGGGATCGTCGCG 60.051 66.667 0.00 0.00 34.19 5.87
307 308 3.544167 CTAGCAGGGATCGTCGCGG 62.544 68.421 6.13 0.00 34.19 6.46
311 312 4.889112 AGGGATCGTCGCGGCCTA 62.889 66.667 4.51 0.00 34.19 3.93
312 313 3.681835 GGGATCGTCGCGGCCTAT 61.682 66.667 4.51 0.00 0.00 2.57
313 314 2.430921 GGATCGTCGCGGCCTATG 60.431 66.667 4.51 0.00 0.00 2.23
314 315 2.643272 GATCGTCGCGGCCTATGA 59.357 61.111 4.51 0.00 0.00 2.15
315 316 1.729838 GATCGTCGCGGCCTATGAC 60.730 63.158 4.51 4.93 0.00 3.06
316 317 3.208884 ATCGTCGCGGCCTATGACC 62.209 63.158 4.51 0.00 0.00 4.02
325 326 1.092348 GGCCTATGACCGAACAAACC 58.908 55.000 0.00 0.00 0.00 3.27
326 327 1.092348 GCCTATGACCGAACAAACCC 58.908 55.000 0.00 0.00 0.00 4.11
327 328 1.612199 GCCTATGACCGAACAAACCCA 60.612 52.381 0.00 0.00 0.00 4.51
328 329 2.785562 CCTATGACCGAACAAACCCAA 58.214 47.619 0.00 0.00 0.00 4.12
329 330 3.150767 CCTATGACCGAACAAACCCAAA 58.849 45.455 0.00 0.00 0.00 3.28
330 331 3.570550 CCTATGACCGAACAAACCCAAAA 59.429 43.478 0.00 0.00 0.00 2.44
331 332 3.726291 ATGACCGAACAAACCCAAAAG 57.274 42.857 0.00 0.00 0.00 2.27
332 333 2.448453 TGACCGAACAAACCCAAAAGT 58.552 42.857 0.00 0.00 0.00 2.66
333 334 2.826725 TGACCGAACAAACCCAAAAGTT 59.173 40.909 0.00 0.00 0.00 2.66
334 335 3.258622 TGACCGAACAAACCCAAAAGTTT 59.741 39.130 0.00 0.00 40.57 2.66
342 343 2.908688 ACCCAAAAGTTTGCATGACC 57.091 45.000 0.00 0.00 36.86 4.02
343 344 1.068434 ACCCAAAAGTTTGCATGACCG 59.932 47.619 0.00 0.00 36.86 4.79
344 345 1.339610 CCCAAAAGTTTGCATGACCGA 59.660 47.619 0.00 0.00 36.86 4.69
345 346 2.223923 CCCAAAAGTTTGCATGACCGAA 60.224 45.455 0.00 0.00 36.86 4.30
346 347 2.794350 CCAAAAGTTTGCATGACCGAAC 59.206 45.455 0.00 0.00 36.86 3.95
347 348 3.443037 CAAAAGTTTGCATGACCGAACA 58.557 40.909 0.00 0.00 32.62 3.18
348 349 3.791973 AAAGTTTGCATGACCGAACAA 57.208 38.095 0.00 0.00 32.62 2.83
349 350 3.791973 AAGTTTGCATGACCGAACAAA 57.208 38.095 0.00 0.00 32.62 2.83
351 352 2.124122 GTTTGCATGACCGAACAAACC 58.876 47.619 11.21 0.00 43.74 3.27
352 353 0.671251 TTGCATGACCGAACAAACCC 59.329 50.000 0.00 0.00 0.00 4.11
353 354 0.466372 TGCATGACCGAACAAACCCA 60.466 50.000 0.00 0.00 0.00 4.51
354 355 0.671251 GCATGACCGAACAAACCCAA 59.329 50.000 0.00 0.00 0.00 4.12
355 356 1.067821 GCATGACCGAACAAACCCAAA 59.932 47.619 0.00 0.00 0.00 3.28
356 357 2.482142 GCATGACCGAACAAACCCAAAA 60.482 45.455 0.00 0.00 0.00 2.44
357 358 3.380142 CATGACCGAACAAACCCAAAAG 58.620 45.455 0.00 0.00 0.00 2.27
358 359 1.135333 TGACCGAACAAACCCAAAAGC 59.865 47.619 0.00 0.00 0.00 3.51
359 360 0.462375 ACCGAACAAACCCAAAAGCC 59.538 50.000 0.00 0.00 0.00 4.35
360 361 0.596341 CCGAACAAACCCAAAAGCCG 60.596 55.000 0.00 0.00 0.00 5.52
361 362 0.382515 CGAACAAACCCAAAAGCCGA 59.617 50.000 0.00 0.00 0.00 5.54
362 363 1.599419 CGAACAAACCCAAAAGCCGAG 60.599 52.381 0.00 0.00 0.00 4.63
363 364 0.104120 AACAAACCCAAAAGCCGAGC 59.896 50.000 0.00 0.00 0.00 5.03
364 365 1.040339 ACAAACCCAAAAGCCGAGCA 61.040 50.000 0.00 0.00 0.00 4.26
365 366 0.103937 CAAACCCAAAAGCCGAGCAA 59.896 50.000 0.00 0.00 0.00 3.91
366 367 0.827368 AAACCCAAAAGCCGAGCAAA 59.173 45.000 0.00 0.00 0.00 3.68
367 368 0.104120 AACCCAAAAGCCGAGCAAAC 59.896 50.000 0.00 0.00 0.00 2.93
368 369 0.755327 ACCCAAAAGCCGAGCAAACT 60.755 50.000 0.00 0.00 0.00 2.66
369 370 0.318955 CCCAAAAGCCGAGCAAACTG 60.319 55.000 0.00 0.00 0.00 3.16
370 371 0.667993 CCAAAAGCCGAGCAAACTGA 59.332 50.000 0.00 0.00 0.00 3.41
371 372 1.600413 CCAAAAGCCGAGCAAACTGAC 60.600 52.381 0.00 0.00 0.00 3.51
372 373 1.065401 CAAAAGCCGAGCAAACTGACA 59.935 47.619 0.00 0.00 0.00 3.58
373 374 1.609208 AAAGCCGAGCAAACTGACAT 58.391 45.000 0.00 0.00 0.00 3.06
374 375 1.609208 AAGCCGAGCAAACTGACATT 58.391 45.000 0.00 0.00 0.00 2.71
375 376 0.877071 AGCCGAGCAAACTGACATTG 59.123 50.000 0.00 0.00 0.00 2.82
376 377 0.109597 GCCGAGCAAACTGACATTGG 60.110 55.000 0.00 0.00 0.00 3.16
377 378 1.522668 CCGAGCAAACTGACATTGGA 58.477 50.000 0.00 0.00 0.00 3.53
378 379 1.466167 CCGAGCAAACTGACATTGGAG 59.534 52.381 0.00 0.00 0.00 3.86
379 380 1.466167 CGAGCAAACTGACATTGGAGG 59.534 52.381 0.00 0.00 0.00 4.30
380 381 2.508526 GAGCAAACTGACATTGGAGGT 58.491 47.619 0.00 0.00 0.00 3.85
381 382 2.227388 GAGCAAACTGACATTGGAGGTG 59.773 50.000 0.00 0.00 0.00 4.00
382 383 1.270550 GCAAACTGACATTGGAGGTGG 59.729 52.381 0.00 0.00 0.00 4.61
383 384 2.862541 CAAACTGACATTGGAGGTGGA 58.137 47.619 0.00 0.00 0.00 4.02
384 385 3.424703 CAAACTGACATTGGAGGTGGAT 58.575 45.455 0.00 0.00 0.00 3.41
385 386 3.814504 AACTGACATTGGAGGTGGATT 57.185 42.857 0.00 0.00 0.00 3.01
386 387 3.814504 ACTGACATTGGAGGTGGATTT 57.185 42.857 0.00 0.00 0.00 2.17
387 388 3.424703 ACTGACATTGGAGGTGGATTTG 58.575 45.455 0.00 0.00 0.00 2.32
388 389 2.165030 CTGACATTGGAGGTGGATTTGC 59.835 50.000 0.00 0.00 0.00 3.68
389 390 2.225091 TGACATTGGAGGTGGATTTGCT 60.225 45.455 0.00 0.00 0.00 3.91
390 391 2.827921 GACATTGGAGGTGGATTTGCTT 59.172 45.455 0.00 0.00 0.00 3.91
391 392 2.827921 ACATTGGAGGTGGATTTGCTTC 59.172 45.455 0.00 0.00 0.00 3.86
392 393 2.978156 TTGGAGGTGGATTTGCTTCT 57.022 45.000 0.00 0.00 0.00 2.85
393 394 2.978156 TGGAGGTGGATTTGCTTCTT 57.022 45.000 0.00 0.00 0.00 2.52
394 395 2.795329 TGGAGGTGGATTTGCTTCTTC 58.205 47.619 0.00 0.00 0.00 2.87
395 396 2.376518 TGGAGGTGGATTTGCTTCTTCT 59.623 45.455 0.00 0.00 0.00 2.85
396 397 3.181429 TGGAGGTGGATTTGCTTCTTCTT 60.181 43.478 0.00 0.00 0.00 2.52
397 398 3.192212 GGAGGTGGATTTGCTTCTTCTTG 59.808 47.826 0.00 0.00 0.00 3.02
398 399 3.823304 GAGGTGGATTTGCTTCTTCTTGT 59.177 43.478 0.00 0.00 0.00 3.16
399 400 4.218312 AGGTGGATTTGCTTCTTCTTGTT 58.782 39.130 0.00 0.00 0.00 2.83
400 401 4.651045 AGGTGGATTTGCTTCTTCTTGTTT 59.349 37.500 0.00 0.00 0.00 2.83
401 402 4.984785 GGTGGATTTGCTTCTTCTTGTTTC 59.015 41.667 0.00 0.00 0.00 2.78
402 403 4.676924 GTGGATTTGCTTCTTCTTGTTTCG 59.323 41.667 0.00 0.00 0.00 3.46
403 404 4.578516 TGGATTTGCTTCTTCTTGTTTCGA 59.421 37.500 0.00 0.00 0.00 3.71
404 405 5.149977 GGATTTGCTTCTTCTTGTTTCGAG 58.850 41.667 0.00 0.00 0.00 4.04
405 406 4.552166 TTTGCTTCTTCTTGTTTCGAGG 57.448 40.909 0.00 0.00 0.00 4.63
406 407 3.469008 TGCTTCTTCTTGTTTCGAGGA 57.531 42.857 0.00 0.00 0.00 3.71
407 408 4.008074 TGCTTCTTCTTGTTTCGAGGAT 57.992 40.909 0.00 0.00 0.00 3.24
408 409 5.147330 TGCTTCTTCTTGTTTCGAGGATA 57.853 39.130 0.00 0.00 0.00 2.59
409 410 5.734720 TGCTTCTTCTTGTTTCGAGGATAT 58.265 37.500 0.00 0.00 0.00 1.63
410 411 6.173339 TGCTTCTTCTTGTTTCGAGGATATT 58.827 36.000 0.00 0.00 0.00 1.28
411 412 6.092670 TGCTTCTTCTTGTTTCGAGGATATTG 59.907 38.462 0.00 0.00 0.00 1.90
412 413 6.457528 GCTTCTTCTTGTTTCGAGGATATTGG 60.458 42.308 0.00 0.00 0.00 3.16
413 414 6.294361 TCTTCTTGTTTCGAGGATATTGGA 57.706 37.500 0.00 0.00 0.00 3.53
414 415 6.341316 TCTTCTTGTTTCGAGGATATTGGAG 58.659 40.000 0.00 0.00 0.00 3.86
415 416 5.023533 TCTTGTTTCGAGGATATTGGAGG 57.976 43.478 0.00 0.00 0.00 4.30
416 417 4.469945 TCTTGTTTCGAGGATATTGGAGGT 59.530 41.667 0.00 0.00 0.00 3.85
417 418 4.137116 TGTTTCGAGGATATTGGAGGTG 57.863 45.455 0.00 0.00 0.00 4.00
418 419 3.118408 TGTTTCGAGGATATTGGAGGTGG 60.118 47.826 0.00 0.00 0.00 4.61
419 420 1.048601 TCGAGGATATTGGAGGTGGC 58.951 55.000 0.00 0.00 0.00 5.01
420 421 0.035458 CGAGGATATTGGAGGTGGCC 59.965 60.000 0.00 0.00 0.00 5.36
421 422 0.402121 GAGGATATTGGAGGTGGCCC 59.598 60.000 0.00 0.00 0.00 5.80
422 423 0.328450 AGGATATTGGAGGTGGCCCA 60.328 55.000 0.00 0.00 0.00 5.36
423 424 0.178990 GGATATTGGAGGTGGCCCAC 60.179 60.000 4.93 4.93 32.58 4.61
424 425 0.550914 GATATTGGAGGTGGCCCACA 59.449 55.000 17.22 0.00 35.86 4.17
425 426 0.552848 ATATTGGAGGTGGCCCACAG 59.447 55.000 17.22 0.00 35.86 3.66
426 427 0.548926 TATTGGAGGTGGCCCACAGA 60.549 55.000 17.22 0.00 35.86 3.41
427 428 2.142292 ATTGGAGGTGGCCCACAGAC 62.142 60.000 17.22 5.09 35.86 3.51
428 429 2.930562 GGAGGTGGCCCACAGACT 60.931 66.667 17.22 3.19 35.86 3.24
429 430 2.529744 GGAGGTGGCCCACAGACTT 61.530 63.158 17.22 0.00 35.86 3.01
430 431 1.302832 GAGGTGGCCCACAGACTTG 60.303 63.158 17.22 0.00 35.86 3.16
431 432 1.768684 GAGGTGGCCCACAGACTTGA 61.769 60.000 17.22 0.00 35.86 3.02
432 433 1.150536 GGTGGCCCACAGACTTGAA 59.849 57.895 17.22 0.00 35.86 2.69
433 434 0.890996 GGTGGCCCACAGACTTGAAG 60.891 60.000 17.22 0.00 35.86 3.02
434 435 0.108585 GTGGCCCACAGACTTGAAGA 59.891 55.000 9.55 0.00 34.08 2.87
435 436 1.067295 TGGCCCACAGACTTGAAGAT 58.933 50.000 0.00 0.00 0.00 2.40
436 437 1.003580 TGGCCCACAGACTTGAAGATC 59.996 52.381 0.00 0.00 0.00 2.75
437 438 1.280421 GGCCCACAGACTTGAAGATCT 59.720 52.381 0.00 0.00 0.00 2.75
438 439 2.290577 GGCCCACAGACTTGAAGATCTT 60.291 50.000 7.95 7.95 0.00 2.40
439 440 3.416156 GCCCACAGACTTGAAGATCTTT 58.584 45.455 9.87 0.00 0.00 2.52
440 441 3.190118 GCCCACAGACTTGAAGATCTTTG 59.810 47.826 9.87 5.24 0.00 2.77
441 442 3.755378 CCCACAGACTTGAAGATCTTTGG 59.245 47.826 9.87 16.33 40.88 3.28
442 443 3.755378 CCACAGACTTGAAGATCTTTGGG 59.245 47.826 9.87 3.61 38.58 4.12
443 444 4.505566 CCACAGACTTGAAGATCTTTGGGA 60.506 45.833 9.87 0.00 38.58 4.37
444 445 4.694509 CACAGACTTGAAGATCTTTGGGAG 59.305 45.833 9.87 7.88 0.00 4.30
445 446 4.594920 ACAGACTTGAAGATCTTTGGGAGA 59.405 41.667 9.87 0.00 39.13 3.71
446 447 4.934602 CAGACTTGAAGATCTTTGGGAGAC 59.065 45.833 9.87 6.15 37.17 3.36
447 448 4.843516 AGACTTGAAGATCTTTGGGAGACT 59.156 41.667 9.87 8.09 37.17 3.24
448 449 6.019748 AGACTTGAAGATCTTTGGGAGACTA 58.980 40.000 9.87 0.00 37.17 2.59
449 450 6.043854 ACTTGAAGATCTTTGGGAGACTAC 57.956 41.667 9.87 0.00 37.17 2.73
450 451 5.782845 ACTTGAAGATCTTTGGGAGACTACT 59.217 40.000 9.87 0.00 37.17 2.57
451 452 6.271159 ACTTGAAGATCTTTGGGAGACTACTT 59.729 38.462 9.87 0.00 37.17 2.24
452 453 6.287589 TGAAGATCTTTGGGAGACTACTTC 57.712 41.667 9.87 0.00 39.75 3.01
453 454 6.019748 TGAAGATCTTTGGGAGACTACTTCT 58.980 40.000 9.87 0.00 39.86 2.85
454 455 6.498651 TGAAGATCTTTGGGAGACTACTTCTT 59.501 38.462 9.87 0.00 39.86 2.52
455 456 6.293004 AGATCTTTGGGAGACTACTTCTTG 57.707 41.667 0.00 0.00 37.17 3.02
456 457 5.782845 AGATCTTTGGGAGACTACTTCTTGT 59.217 40.000 0.00 0.00 37.17 3.16
457 458 5.215252 TCTTTGGGAGACTACTTCTTGTG 57.785 43.478 0.00 0.00 33.22 3.33
458 459 3.402628 TTGGGAGACTACTTCTTGTGC 57.597 47.619 0.00 0.00 33.22 4.57
459 460 2.609747 TGGGAGACTACTTCTTGTGCT 58.390 47.619 0.00 0.00 33.22 4.40
460 461 2.563179 TGGGAGACTACTTCTTGTGCTC 59.437 50.000 0.00 0.00 33.22 4.26
461 462 2.829120 GGGAGACTACTTCTTGTGCTCT 59.171 50.000 0.00 0.00 33.22 4.09
462 463 4.017808 GGGAGACTACTTCTTGTGCTCTA 58.982 47.826 0.00 0.00 33.22 2.43
463 464 4.463186 GGGAGACTACTTCTTGTGCTCTAA 59.537 45.833 0.00 0.00 33.22 2.10
464 465 5.404096 GGAGACTACTTCTTGTGCTCTAAC 58.596 45.833 0.00 0.00 33.22 2.34
465 466 5.047943 GGAGACTACTTCTTGTGCTCTAACA 60.048 44.000 0.00 0.00 33.22 2.41
466 467 6.350612 GGAGACTACTTCTTGTGCTCTAACAT 60.351 42.308 0.00 0.00 33.22 2.71
467 468 6.393990 AGACTACTTCTTGTGCTCTAACATG 58.606 40.000 0.00 0.00 0.00 3.21
468 469 5.482908 ACTACTTCTTGTGCTCTAACATGG 58.517 41.667 0.00 0.00 0.00 3.66
469 470 4.623932 ACTTCTTGTGCTCTAACATGGA 57.376 40.909 0.00 0.00 0.00 3.41
470 471 5.171339 ACTTCTTGTGCTCTAACATGGAT 57.829 39.130 0.00 0.00 0.00 3.41
471 472 5.564550 ACTTCTTGTGCTCTAACATGGATT 58.435 37.500 0.00 0.00 0.00 3.01
472 473 6.006449 ACTTCTTGTGCTCTAACATGGATTT 58.994 36.000 0.00 0.00 0.00 2.17
473 474 5.885230 TCTTGTGCTCTAACATGGATTTG 57.115 39.130 0.00 0.00 0.00 2.32
474 475 4.156556 TCTTGTGCTCTAACATGGATTTGC 59.843 41.667 0.00 0.00 0.00 3.68
475 476 3.689347 TGTGCTCTAACATGGATTTGCT 58.311 40.909 0.00 0.00 0.00 3.91
476 477 3.441222 TGTGCTCTAACATGGATTTGCTG 59.559 43.478 0.00 0.00 0.00 4.41
477 478 3.018856 TGCTCTAACATGGATTTGCTGG 58.981 45.455 0.00 0.00 0.00 4.85
478 479 2.223665 GCTCTAACATGGATTTGCTGGC 60.224 50.000 0.00 0.00 0.00 4.85
479 480 2.360165 CTCTAACATGGATTTGCTGGCC 59.640 50.000 0.00 0.00 0.00 5.36
480 481 2.101783 CTAACATGGATTTGCTGGCCA 58.898 47.619 4.71 4.71 35.91 5.36
481 482 1.575419 AACATGGATTTGCTGGCCAT 58.425 45.000 5.51 0.00 42.91 4.40
483 484 3.619475 ATGGATTTGCTGGCCATGA 57.381 47.368 5.51 0.00 40.72 3.07
484 485 2.097110 ATGGATTTGCTGGCCATGAT 57.903 45.000 5.51 0.00 40.72 2.45
485 486 1.868713 TGGATTTGCTGGCCATGATT 58.131 45.000 5.51 0.00 0.00 2.57
486 487 2.189676 TGGATTTGCTGGCCATGATTT 58.810 42.857 5.51 0.00 0.00 2.17
487 488 2.572556 TGGATTTGCTGGCCATGATTTT 59.427 40.909 5.51 0.00 0.00 1.82
488 489 3.009253 TGGATTTGCTGGCCATGATTTTT 59.991 39.130 5.51 0.00 0.00 1.94
512 513 8.894409 TTTTTCATGCTTTATGTAATCAGACG 57.106 30.769 0.00 0.00 38.01 4.18
513 514 7.609760 TTTCATGCTTTATGTAATCAGACGT 57.390 32.000 0.00 0.00 38.01 4.34
514 515 7.609760 TTCATGCTTTATGTAATCAGACGTT 57.390 32.000 0.00 0.00 38.01 3.99
515 516 7.609760 TCATGCTTTATGTAATCAGACGTTT 57.390 32.000 0.00 0.00 38.01 3.60
516 517 7.463544 TCATGCTTTATGTAATCAGACGTTTG 58.536 34.615 0.00 0.00 38.01 2.93
517 518 7.333174 TCATGCTTTATGTAATCAGACGTTTGA 59.667 33.333 11.59 11.59 38.01 2.69
518 519 6.827641 TGCTTTATGTAATCAGACGTTTGAC 58.172 36.000 11.42 0.11 0.00 3.18
519 520 6.649141 TGCTTTATGTAATCAGACGTTTGACT 59.351 34.615 11.42 2.67 0.00 3.41
520 521 7.172532 TGCTTTATGTAATCAGACGTTTGACTT 59.827 33.333 11.42 9.39 0.00 3.01
521 522 7.688578 GCTTTATGTAATCAGACGTTTGACTTC 59.311 37.037 11.42 0.00 0.00 3.01
522 523 5.763444 ATGTAATCAGACGTTTGACTTCG 57.237 39.130 11.42 0.00 0.00 3.79
523 524 3.985279 TGTAATCAGACGTTTGACTTCGG 59.015 43.478 11.42 0.00 0.00 4.30
524 525 1.429463 ATCAGACGTTTGACTTCGGC 58.571 50.000 11.42 0.00 35.08 5.54
525 526 0.103390 TCAGACGTTTGACTTCGGCA 59.897 50.000 4.39 0.00 37.57 5.69
526 527 1.148310 CAGACGTTTGACTTCGGCAT 58.852 50.000 0.00 0.00 37.57 4.40
527 528 1.531149 CAGACGTTTGACTTCGGCATT 59.469 47.619 0.00 0.00 37.57 3.56
528 529 1.798813 AGACGTTTGACTTCGGCATTC 59.201 47.619 0.00 0.00 37.57 2.67
529 530 1.798813 GACGTTTGACTTCGGCATTCT 59.201 47.619 0.00 0.00 34.97 2.40
530 531 1.531149 ACGTTTGACTTCGGCATTCTG 59.469 47.619 0.00 0.00 0.00 3.02
531 532 1.798223 CGTTTGACTTCGGCATTCTGA 59.202 47.619 0.00 0.00 0.00 3.27
532 533 2.411547 CGTTTGACTTCGGCATTCTGAC 60.412 50.000 0.00 0.00 0.00 3.51
533 534 2.542020 TTGACTTCGGCATTCTGACA 57.458 45.000 0.00 0.00 0.00 3.58
534 535 2.768253 TGACTTCGGCATTCTGACAT 57.232 45.000 0.00 0.00 0.00 3.06
535 536 2.621338 TGACTTCGGCATTCTGACATC 58.379 47.619 0.00 0.00 0.00 3.06
536 537 2.028203 TGACTTCGGCATTCTGACATCA 60.028 45.455 0.00 0.00 0.00 3.07
537 538 3.201290 GACTTCGGCATTCTGACATCAT 58.799 45.455 0.00 0.00 0.00 2.45
538 539 3.614092 ACTTCGGCATTCTGACATCATT 58.386 40.909 0.00 0.00 0.00 2.57
539 540 4.012374 ACTTCGGCATTCTGACATCATTT 58.988 39.130 0.00 0.00 0.00 2.32
540 541 4.460382 ACTTCGGCATTCTGACATCATTTT 59.540 37.500 0.00 0.00 0.00 1.82
541 542 5.047802 ACTTCGGCATTCTGACATCATTTTT 60.048 36.000 0.00 0.00 0.00 1.94
589 590 5.559770 TGGTGCATATCTTTTTCTGACAGA 58.440 37.500 0.00 0.00 0.00 3.41
595 596 6.292596 GCATATCTTTTTCTGACAGATCGACC 60.293 42.308 5.87 0.00 0.00 4.79
632 633 5.482006 TCTATAATTGGTGCAGATCGATGG 58.518 41.667 0.54 0.00 0.00 3.51
721 722 1.850377 CAAGTTTGCAAACCATCGCA 58.150 45.000 33.09 0.00 39.71 5.10
738 739 1.600957 CGCACAACAGATCATGGATCC 59.399 52.381 4.20 4.20 39.66 3.36
792 793 1.748493 GTTTGGGCAAGTGACAGTTCA 59.252 47.619 0.00 0.00 0.00 3.18
872 884 2.301346 CACCAGAACTTTTCAGCCTGT 58.699 47.619 0.00 0.00 0.00 4.00
981 997 3.691049 CTCTACTGAGAGGAAGAAGCG 57.309 52.381 0.00 0.00 44.92 4.68
1115 1131 3.403558 GACAGGGGAGGCCAGGAC 61.404 72.222 5.01 0.00 0.00 3.85
1213 1229 2.087646 GCCTCTTCTCCAATGTCAACC 58.912 52.381 0.00 0.00 0.00 3.77
1218 1234 0.038166 TCTCCAATGTCAACCAGGCC 59.962 55.000 0.00 0.00 0.00 5.19
1236 1252 1.376424 CACCATGAAGCACGAGCCT 60.376 57.895 0.00 0.00 43.56 4.58
1285 1301 0.593128 TGCTTTGCCGAGCTTTCTTC 59.407 50.000 9.46 0.00 43.11 2.87
1289 1305 2.435059 GCCGAGCTTTCTTCCGCT 60.435 61.111 0.00 0.00 39.61 5.52
1291 1307 1.578206 GCCGAGCTTTCTTCCGCTTT 61.578 55.000 0.00 0.00 36.45 3.51
1293 1309 1.135944 CCGAGCTTTCTTCCGCTTTTC 60.136 52.381 0.00 0.00 36.45 2.29
1452 1468 1.112113 ACCGCCTTCGATGTATCACT 58.888 50.000 0.00 0.00 38.10 3.41
1582 1600 4.565962 CCTGTCGAGAATCACTGAAATGAG 59.434 45.833 0.00 0.00 33.17 2.90
1658 1677 5.820131 TCATGAAACTAATATTGCAAGCCG 58.180 37.500 4.94 0.00 0.00 5.52
1671 1690 8.715191 ATATTGCAAGCCGAAAAATTCATAAA 57.285 26.923 4.94 0.00 0.00 1.40
1673 1692 4.928615 TGCAAGCCGAAAAATTCATAAAGG 59.071 37.500 0.00 0.00 0.00 3.11
1675 1694 5.062183 GCAAGCCGAAAAATTCATAAAGGAC 59.938 40.000 0.00 0.00 0.00 3.85
1697 1821 1.026718 ATGCTACGCACCTTGAAGCC 61.027 55.000 0.00 0.00 43.04 4.35
1700 1824 1.078759 CTACGCACCTTGAAGCCTCG 61.079 60.000 0.00 0.00 0.00 4.63
1711 1835 2.673523 AGCCTCGGCAGCTTTGAT 59.326 55.556 11.02 0.00 44.88 2.57
1715 1839 1.959042 CCTCGGCAGCTTTGATACAT 58.041 50.000 0.00 0.00 0.00 2.29
1716 1840 1.600957 CCTCGGCAGCTTTGATACATG 59.399 52.381 0.00 0.00 0.00 3.21
1717 1841 1.003116 CTCGGCAGCTTTGATACATGC 60.003 52.381 0.00 0.00 36.16 4.06
1718 1842 1.019673 CGGCAGCTTTGATACATGCT 58.980 50.000 0.00 0.00 37.08 3.79
1719 1843 1.003116 CGGCAGCTTTGATACATGCTC 60.003 52.381 0.00 0.00 37.08 4.26
1720 1844 2.295885 GGCAGCTTTGATACATGCTCT 58.704 47.619 0.00 0.00 37.08 4.09
1761 1887 8.725405 TTTCACACATGTTAGAAACTACTTGA 57.275 30.769 15.08 0.00 0.00 3.02
1762 1888 8.725405 TTCACACATGTTAGAAACTACTTGAA 57.275 30.769 0.00 0.00 0.00 2.69
1763 1889 8.725405 TCACACATGTTAGAAACTACTTGAAA 57.275 30.769 0.00 0.00 0.00 2.69
1764 1890 9.337396 TCACACATGTTAGAAACTACTTGAAAT 57.663 29.630 0.00 0.00 0.00 2.17
1778 1908 7.112779 ACTACTTGAAATATCCCTTTGGAGTG 58.887 38.462 0.00 0.00 46.08 3.51
1817 1947 3.492102 AGTTCAGAGTAAGCAAAGGCA 57.508 42.857 0.00 0.00 44.61 4.75
1855 1985 9.219603 CATAACTGAACTTCCTTTTCATCTACA 57.780 33.333 0.00 0.00 32.57 2.74
1885 2015 2.508751 GGTCGGGGCAGGTATCCTC 61.509 68.421 0.00 0.00 0.00 3.71
1971 2101 9.539825 CTGCTGGACATATATGGTAATAGAATC 57.460 37.037 16.96 2.19 0.00 2.52
1972 2102 9.045745 TGCTGGACATATATGGTAATAGAATCA 57.954 33.333 16.96 0.00 0.00 2.57
1973 2103 9.539825 GCTGGACATATATGGTAATAGAATCAG 57.460 37.037 16.96 9.10 0.00 2.90
2088 2218 5.006649 CGCGTTCTTGGATAAATTCTCATCA 59.993 40.000 0.00 0.00 0.00 3.07
2287 2417 3.283751 ACTAGGATCTGGAAGTGTCTCG 58.716 50.000 0.00 0.00 33.76 4.04
2387 2555 7.370383 CAACTAAAAAGTGGCATATGAAGTGT 58.630 34.615 6.97 0.00 0.00 3.55
2586 2756 1.449070 CATGCTCTCTGAAGGCGCA 60.449 57.895 10.83 0.00 35.08 6.09
2690 2860 8.709646 CGGCTGAGGTTTATTTATGTATAAGAC 58.290 37.037 0.00 0.00 0.00 3.01
2717 2910 8.165239 TCCAAATCGTAATTGGGATTCATAAG 57.835 34.615 13.79 0.00 45.97 1.73
2744 2937 6.727824 ATGTAATGACACTCAGTTACAAGC 57.272 37.500 3.41 0.00 38.76 4.01
2755 2948 8.292448 ACACTCAGTTACAAGCTCATATTTTTG 58.708 33.333 0.00 0.00 0.00 2.44
2865 3058 3.788694 CACGCTCTTCAGAGATCTTAACG 59.211 47.826 8.09 2.60 44.74 3.18
2967 3168 9.530633 GTAACAATGTTGTATCCCTCTTACTAG 57.469 37.037 9.15 0.00 41.31 2.57
2979 3180 5.061853 CCCTCTTACTAGTCGTGTATAGCA 58.938 45.833 0.00 0.00 0.00 3.49
3039 3240 5.810080 ACCCCGGAAAAACAAAATATCAA 57.190 34.783 0.73 0.00 0.00 2.57
3168 3378 6.844388 ACTAAGGGTCATTAGTCATCACCATA 59.156 38.462 2.65 0.00 41.11 2.74
3268 3478 2.168313 CCTGTTTTCACTGGCTTTTGGT 59.832 45.455 0.00 0.00 35.40 3.67
3293 3503 6.038985 GGACTATGTTACTTCGGAAGGTAAC 58.961 44.000 20.97 21.87 44.43 2.50
3384 3594 6.212955 CAGATATCTCCTTTTCCGAGTTCTC 58.787 44.000 1.03 0.00 0.00 2.87
3408 3618 3.744660 CTGCTTAACTTCAGGGTTCACT 58.255 45.455 0.00 0.00 0.00 3.41
3420 3630 6.024552 TCAGGGTTCACTGCAAAATATTTC 57.975 37.500 0.10 0.00 38.36 2.17
3531 3887 7.366513 TCTCGATTTCAAAACAAATGCACATA 58.633 30.769 0.00 0.00 0.00 2.29
3535 3891 8.433893 CGATTTCAAAACAAATGCACATATCAA 58.566 29.630 0.00 0.00 0.00 2.57
3558 3914 8.602424 TCAATAGTAAGGTTCTCAAAAGATGGA 58.398 33.333 0.00 0.00 0.00 3.41
3573 3940 6.803154 AAAGATGGACAGTTTGCTACTTAC 57.197 37.500 0.00 0.00 33.85 2.34
3746 4207 5.847304 TCAGTATCATAGCATCCTTCACAC 58.153 41.667 0.00 0.00 0.00 3.82
3819 4280 5.076598 ACCTTGATAATCCTAGGCTCCTAGA 59.923 44.000 21.41 10.03 46.56 2.43
3823 4284 6.625267 TGATAATCCTAGGCTCCTAGAAGTT 58.375 40.000 21.41 14.86 46.56 2.66
4061 4524 6.922247 TTCAGTAATGGTACGAGTAGAGAG 57.078 41.667 0.00 0.00 35.20 3.20
4114 4584 6.719370 ACATGAGCAAACCACTAGGAAATTTA 59.281 34.615 0.00 0.00 38.69 1.40
4165 4635 3.064207 GTGTAGACGCTGAACAAATGGA 58.936 45.455 0.00 0.00 0.00 3.41
4261 4731 7.129425 TGCTCCCCAAAGTATACCAATAATTT 58.871 34.615 0.00 0.00 36.55 1.82
4505 4986 8.994429 AGAGATATACAGTGTTTTCAGACTTG 57.006 34.615 0.00 0.00 0.00 3.16
4508 4989 7.661437 AGATATACAGTGTTTTCAGACTTGCAA 59.339 33.333 0.00 0.00 0.00 4.08
4516 4997 5.160641 GTTTTCAGACTTGCAACAACAGAA 58.839 37.500 0.00 0.00 0.00 3.02
4769 5252 1.471829 GGGGTTTGCAGAAAGTGGGG 61.472 60.000 0.00 0.00 0.00 4.96
4784 5267 0.685097 TGGGGCTATTACTGATCCGC 59.315 55.000 0.00 0.00 0.00 5.54
4873 5357 8.196771 TGTGCTATAAATTGGGATTGATTTGAC 58.803 33.333 0.00 0.00 0.00 3.18
5050 5534 4.885325 GGAAGAGGTCTAGAGTAGAACCTG 59.115 50.000 3.40 0.00 43.60 4.00
5063 5547 5.580022 AGTAGAACCTGGCCAATTTTATGT 58.420 37.500 7.01 0.00 0.00 2.29
5094 5578 4.455877 ACATGAAGGTAGCAAAACAGTAGC 59.544 41.667 0.00 0.00 0.00 3.58
5095 5579 3.408634 TGAAGGTAGCAAAACAGTAGCC 58.591 45.455 0.00 0.00 0.00 3.93
5097 5581 3.059352 AGGTAGCAAAACAGTAGCCAG 57.941 47.619 0.00 0.00 0.00 4.85
5115 5599 0.034670 AGATTTCTGGGACTGCAGCC 60.035 55.000 15.27 15.83 0.00 4.85
5320 5804 4.636206 GGAGGTAAGGATGCTTTTACAGTG 59.364 45.833 4.26 0.00 32.68 3.66
5344 5828 6.099845 TGTCTCTAATCCCAAGGAGAAATACC 59.900 42.308 0.00 0.00 36.72 2.73
5345 5829 6.327887 GTCTCTAATCCCAAGGAGAAATACCT 59.672 42.308 0.00 0.00 36.72 3.08
5347 5831 5.970640 TCTAATCCCAAGGAGAAATACCTGT 59.029 40.000 0.00 0.00 37.85 4.00
5416 5901 5.361571 TGCAGAACATTCATATGGATTGCTT 59.638 36.000 16.01 0.48 36.76 3.91
5439 5926 6.801539 TTCATCTACTGCAGTAACCTTTTG 57.198 37.500 25.95 13.37 0.00 2.44
5623 6111 3.116159 ACTTGGAAGCTCCTATATCCCCT 60.116 47.826 0.00 0.00 37.46 4.79
5736 6224 7.624344 GCAGTTACAAGGACTACATTGACAATC 60.624 40.741 0.00 0.00 39.71 2.67
5750 6238 3.840468 TGACAATCATGATGTGCAAAGC 58.160 40.909 9.46 0.00 0.00 3.51
5820 6308 8.567285 AAGAGGTATTAACACATCCAAAAGAG 57.433 34.615 0.00 0.00 29.53 2.85
5822 6310 8.383175 AGAGGTATTAACACATCCAAAAGAGAA 58.617 33.333 0.00 0.00 29.53 2.87
5823 6311 9.178758 GAGGTATTAACACATCCAAAAGAGAAT 57.821 33.333 0.00 0.00 0.00 2.40
5867 6365 5.674525 TCGGCAGTTTCATCAAGATATTCT 58.325 37.500 0.00 0.00 0.00 2.40
5868 6366 6.115446 TCGGCAGTTTCATCAAGATATTCTT 58.885 36.000 0.00 0.00 37.14 2.52
5910 6421 6.751514 ATGTCAAGTTGAGTTGTGTTGTAA 57.248 33.333 5.62 0.00 0.00 2.41
5988 6499 9.090103 TCCTACTGCTACTTTACATAATGCTAT 57.910 33.333 0.00 0.00 0.00 2.97
6097 6608 6.207810 ACCCGCAACAATAGTAAATTCAAGAA 59.792 34.615 0.00 0.00 0.00 2.52
6201 6713 7.352719 AGTTCGTTTAGAGTTCATGATGTTC 57.647 36.000 0.00 0.00 0.00 3.18
6597 7118 2.481952 GCTTCTCACTGTGATGTCCAAC 59.518 50.000 11.45 0.00 0.00 3.77
6688 7209 1.303309 GCATCCTTCCACCAATCTCG 58.697 55.000 0.00 0.00 0.00 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.447838 TCGACGCTTTCTCCATGGC 60.448 57.895 6.96 0.00 0.00 4.40
2 3 0.456142 TCGTCGACGCTTTCTCCATG 60.456 55.000 32.19 2.59 39.60 3.66
3 4 0.456221 ATCGTCGACGCTTTCTCCAT 59.544 50.000 32.19 15.32 39.60 3.41
4 5 0.456142 CATCGTCGACGCTTTCTCCA 60.456 55.000 32.19 13.58 39.60 3.86
5 6 0.179171 TCATCGTCGACGCTTTCTCC 60.179 55.000 32.19 0.00 39.60 3.71
6 7 1.514811 CATCATCGTCGACGCTTTCTC 59.485 52.381 32.19 0.00 39.60 2.87
7 8 1.135373 ACATCATCGTCGACGCTTTCT 60.135 47.619 32.19 12.90 39.60 2.52
8 9 1.269166 ACATCATCGTCGACGCTTTC 58.731 50.000 32.19 0.00 39.60 2.62
9 10 2.182825 GTACATCATCGTCGACGCTTT 58.817 47.619 32.19 16.64 39.60 3.51
10 11 1.131693 TGTACATCATCGTCGACGCTT 59.868 47.619 32.19 19.19 39.60 4.68
11 12 0.730840 TGTACATCATCGTCGACGCT 59.269 50.000 32.19 21.45 39.60 5.07
12 13 1.755161 ATGTACATCATCGTCGACGC 58.245 50.000 32.19 16.16 39.60 5.19
13 14 3.105937 ACAATGTACATCATCGTCGACG 58.894 45.455 31.30 31.30 35.48 5.12
14 15 4.440103 GGTACAATGTACATCATCGTCGAC 59.560 45.833 23.04 5.18 35.48 4.20
15 16 4.498513 GGGTACAATGTACATCATCGTCGA 60.499 45.833 23.04 0.00 35.48 4.20
16 17 3.734231 GGGTACAATGTACATCATCGTCG 59.266 47.826 23.04 0.00 35.48 5.12
17 18 3.734231 CGGGTACAATGTACATCATCGTC 59.266 47.826 23.04 5.00 35.48 4.20
18 19 3.491964 CCGGGTACAATGTACATCATCGT 60.492 47.826 23.04 7.06 35.48 3.73
19 20 3.057019 CCGGGTACAATGTACATCATCG 58.943 50.000 23.04 16.55 35.48 3.84
20 21 3.070446 TCCCGGGTACAATGTACATCATC 59.930 47.826 22.86 6.98 35.48 2.92
21 22 3.042682 TCCCGGGTACAATGTACATCAT 58.957 45.455 22.86 2.92 38.57 2.45
22 23 2.468915 TCCCGGGTACAATGTACATCA 58.531 47.619 22.86 0.00 0.00 3.07
23 24 3.399330 CATCCCGGGTACAATGTACATC 58.601 50.000 22.86 14.00 0.00 3.06
24 25 2.486548 GCATCCCGGGTACAATGTACAT 60.487 50.000 22.86 1.41 0.00 2.29
25 26 1.134340 GCATCCCGGGTACAATGTACA 60.134 52.381 22.86 0.00 0.00 2.90
26 27 1.589803 GCATCCCGGGTACAATGTAC 58.410 55.000 22.86 14.73 0.00 2.90
27 28 0.470766 GGCATCCCGGGTACAATGTA 59.529 55.000 22.86 0.00 0.00 2.29
28 29 1.226262 GGCATCCCGGGTACAATGT 59.774 57.895 22.86 0.00 0.00 2.71
29 30 1.528309 GGGCATCCCGGGTACAATG 60.528 63.158 22.86 17.84 32.13 2.82
30 31 2.923837 GGGCATCCCGGGTACAAT 59.076 61.111 22.86 2.81 32.13 2.71
39 40 1.228184 CTCAGAGCATGGGCATCCC 60.228 63.158 0.00 0.00 45.71 3.85
40 41 0.182061 TTCTCAGAGCATGGGCATCC 59.818 55.000 0.00 0.00 44.61 3.51
41 42 1.595466 CTTCTCAGAGCATGGGCATC 58.405 55.000 0.00 0.00 44.61 3.91
42 43 0.465824 GCTTCTCAGAGCATGGGCAT 60.466 55.000 0.00 0.00 44.61 4.40
43 44 1.077930 GCTTCTCAGAGCATGGGCA 60.078 57.895 0.00 0.00 44.61 5.36
44 45 3.824810 GCTTCTCAGAGCATGGGC 58.175 61.111 0.00 0.00 42.25 5.36
50 51 1.538950 CTTTGGGTTGCTTCTCAGAGC 59.461 52.381 0.00 0.00 43.00 4.09
51 52 1.538950 GCTTTGGGTTGCTTCTCAGAG 59.461 52.381 0.00 0.00 0.00 3.35
52 53 1.133823 TGCTTTGGGTTGCTTCTCAGA 60.134 47.619 0.00 0.00 0.00 3.27
53 54 1.321474 TGCTTTGGGTTGCTTCTCAG 58.679 50.000 0.00 0.00 0.00 3.35
54 55 1.682854 CTTGCTTTGGGTTGCTTCTCA 59.317 47.619 0.00 0.00 0.00 3.27
55 56 1.603931 GCTTGCTTTGGGTTGCTTCTC 60.604 52.381 0.00 0.00 0.00 2.87
56 57 0.390492 GCTTGCTTTGGGTTGCTTCT 59.610 50.000 0.00 0.00 0.00 2.85
57 58 0.104671 TGCTTGCTTTGGGTTGCTTC 59.895 50.000 0.00 0.00 0.00 3.86
58 59 0.760572 ATGCTTGCTTTGGGTTGCTT 59.239 45.000 0.00 0.00 0.00 3.91
59 60 0.034337 CATGCTTGCTTTGGGTTGCT 59.966 50.000 0.00 0.00 0.00 3.91
60 61 0.033781 TCATGCTTGCTTTGGGTTGC 59.966 50.000 0.00 0.00 0.00 4.17
61 62 1.068895 TGTCATGCTTGCTTTGGGTTG 59.931 47.619 0.00 0.00 0.00 3.77
62 63 1.412079 TGTCATGCTTGCTTTGGGTT 58.588 45.000 0.00 0.00 0.00 4.11
63 64 1.636148 ATGTCATGCTTGCTTTGGGT 58.364 45.000 0.00 0.00 0.00 4.51
64 65 2.492881 TGTATGTCATGCTTGCTTTGGG 59.507 45.455 2.45 0.00 0.00 4.12
65 66 3.853831 TGTATGTCATGCTTGCTTTGG 57.146 42.857 2.45 0.00 0.00 3.28
66 67 4.548494 TGTTGTATGTCATGCTTGCTTTG 58.452 39.130 2.45 0.00 0.00 2.77
67 68 4.852134 TGTTGTATGTCATGCTTGCTTT 57.148 36.364 2.45 0.00 0.00 3.51
68 69 4.703575 AGATGTTGTATGTCATGCTTGCTT 59.296 37.500 2.45 0.00 0.00 3.91
69 70 4.267536 AGATGTTGTATGTCATGCTTGCT 58.732 39.130 2.45 0.00 0.00 3.91
70 71 4.334759 AGAGATGTTGTATGTCATGCTTGC 59.665 41.667 2.45 0.00 0.00 4.01
71 72 7.543947 TTAGAGATGTTGTATGTCATGCTTG 57.456 36.000 2.45 0.00 0.00 4.01
72 73 8.743085 ATTTAGAGATGTTGTATGTCATGCTT 57.257 30.769 2.45 0.00 0.00 3.91
73 74 8.743085 AATTTAGAGATGTTGTATGTCATGCT 57.257 30.769 2.45 0.00 0.00 3.79
74 75 7.795734 CGAATTTAGAGATGTTGTATGTCATGC 59.204 37.037 0.00 0.00 0.00 4.06
75 76 9.034544 TCGAATTTAGAGATGTTGTATGTCATG 57.965 33.333 0.00 0.00 0.00 3.07
76 77 9.035607 GTCGAATTTAGAGATGTTGTATGTCAT 57.964 33.333 0.00 0.00 0.00 3.06
77 78 8.032451 TGTCGAATTTAGAGATGTTGTATGTCA 58.968 33.333 0.00 0.00 0.00 3.58
78 79 8.321716 GTGTCGAATTTAGAGATGTTGTATGTC 58.678 37.037 0.00 0.00 0.00 3.06
79 80 7.277981 GGTGTCGAATTTAGAGATGTTGTATGT 59.722 37.037 0.00 0.00 0.00 2.29
80 81 7.515215 CGGTGTCGAATTTAGAGATGTTGTATG 60.515 40.741 0.00 0.00 39.00 2.39
81 82 6.475727 CGGTGTCGAATTTAGAGATGTTGTAT 59.524 38.462 0.00 0.00 39.00 2.29
82 83 5.803461 CGGTGTCGAATTTAGAGATGTTGTA 59.197 40.000 0.00 0.00 39.00 2.41
83 84 4.625742 CGGTGTCGAATTTAGAGATGTTGT 59.374 41.667 0.00 0.00 39.00 3.32
84 85 4.032900 CCGGTGTCGAATTTAGAGATGTTG 59.967 45.833 0.00 0.00 39.00 3.33
85 86 4.181578 CCGGTGTCGAATTTAGAGATGTT 58.818 43.478 0.00 0.00 39.00 2.71
86 87 3.430374 CCCGGTGTCGAATTTAGAGATGT 60.430 47.826 0.00 0.00 39.00 3.06
87 88 3.123804 CCCGGTGTCGAATTTAGAGATG 58.876 50.000 0.00 0.00 39.00 2.90
88 89 2.764572 ACCCGGTGTCGAATTTAGAGAT 59.235 45.455 0.00 0.00 39.00 2.75
89 90 2.173519 ACCCGGTGTCGAATTTAGAGA 58.826 47.619 0.00 0.00 39.00 3.10
90 91 2.667473 ACCCGGTGTCGAATTTAGAG 57.333 50.000 0.00 0.00 39.00 2.43
91 92 2.159393 CGTACCCGGTGTCGAATTTAGA 60.159 50.000 0.00 0.00 39.00 2.10
92 93 2.187707 CGTACCCGGTGTCGAATTTAG 58.812 52.381 0.00 0.00 39.00 1.85
93 94 1.735369 GCGTACCCGGTGTCGAATTTA 60.735 52.381 17.25 0.00 39.00 1.40
94 95 1.015607 GCGTACCCGGTGTCGAATTT 61.016 55.000 17.25 0.00 39.00 1.82
95 96 1.446618 GCGTACCCGGTGTCGAATT 60.447 57.895 17.25 0.00 39.00 2.17
96 97 2.182537 GCGTACCCGGTGTCGAAT 59.817 61.111 17.25 0.00 39.00 3.34
97 98 4.054825 GGCGTACCCGGTGTCGAA 62.055 66.667 17.25 0.00 39.00 3.71
102 103 4.789075 CTCGTGGCGTACCCGGTG 62.789 72.222 0.00 0.00 35.87 4.94
105 106 4.728102 TTGCTCGTGGCGTACCCG 62.728 66.667 0.00 0.00 45.43 5.28
106 107 3.116531 GTTGCTCGTGGCGTACCC 61.117 66.667 0.00 0.00 45.43 3.69
107 108 3.116531 GGTTGCTCGTGGCGTACC 61.117 66.667 9.72 9.72 45.43 3.34
108 109 1.897398 CTTGGTTGCTCGTGGCGTAC 61.897 60.000 0.00 0.00 45.43 3.67
109 110 1.666553 CTTGGTTGCTCGTGGCGTA 60.667 57.895 0.00 0.00 45.43 4.42
110 111 2.972505 CTTGGTTGCTCGTGGCGT 60.973 61.111 0.00 0.00 45.43 5.68
111 112 2.664851 TCTTGGTTGCTCGTGGCG 60.665 61.111 0.00 0.00 45.43 5.69
112 113 1.444119 TTGTCTTGGTTGCTCGTGGC 61.444 55.000 0.00 0.00 42.22 5.01
113 114 0.307760 GTTGTCTTGGTTGCTCGTGG 59.692 55.000 0.00 0.00 0.00 4.94
114 115 1.013596 TGTTGTCTTGGTTGCTCGTG 58.986 50.000 0.00 0.00 0.00 4.35
115 116 1.014352 GTGTTGTCTTGGTTGCTCGT 58.986 50.000 0.00 0.00 0.00 4.18
116 117 0.307760 GGTGTTGTCTTGGTTGCTCG 59.692 55.000 0.00 0.00 0.00 5.03
117 118 1.680338 AGGTGTTGTCTTGGTTGCTC 58.320 50.000 0.00 0.00 0.00 4.26
118 119 2.024414 GAAGGTGTTGTCTTGGTTGCT 58.976 47.619 0.00 0.00 0.00 3.91
119 120 1.748493 TGAAGGTGTTGTCTTGGTTGC 59.252 47.619 0.00 0.00 0.00 4.17
120 121 2.752354 TGTGAAGGTGTTGTCTTGGTTG 59.248 45.455 0.00 0.00 0.00 3.77
121 122 3.080300 TGTGAAGGTGTTGTCTTGGTT 57.920 42.857 0.00 0.00 0.00 3.67
122 123 2.799126 TGTGAAGGTGTTGTCTTGGT 57.201 45.000 0.00 0.00 0.00 3.67
123 124 4.423732 CTTTTGTGAAGGTGTTGTCTTGG 58.576 43.478 0.00 0.00 0.00 3.61
124 125 4.157656 TCCTTTTGTGAAGGTGTTGTCTTG 59.842 41.667 4.85 0.00 38.55 3.02
125 126 4.340617 TCCTTTTGTGAAGGTGTTGTCTT 58.659 39.130 4.85 0.00 38.55 3.01
126 127 3.947834 CTCCTTTTGTGAAGGTGTTGTCT 59.052 43.478 4.85 0.00 38.55 3.41
127 128 3.945285 TCTCCTTTTGTGAAGGTGTTGTC 59.055 43.478 4.85 0.00 38.55 3.18
128 129 3.963129 TCTCCTTTTGTGAAGGTGTTGT 58.037 40.909 4.85 0.00 38.55 3.32
129 130 4.981806 TTCTCCTTTTGTGAAGGTGTTG 57.018 40.909 4.85 0.00 38.55 3.33
130 131 5.993748 TTTTCTCCTTTTGTGAAGGTGTT 57.006 34.783 4.85 0.00 38.55 3.32
131 132 5.422012 ACATTTTCTCCTTTTGTGAAGGTGT 59.578 36.000 4.85 0.00 38.55 4.16
132 133 5.906073 ACATTTTCTCCTTTTGTGAAGGTG 58.094 37.500 4.85 3.10 38.55 4.00
133 134 5.221048 CGACATTTTCTCCTTTTGTGAAGGT 60.221 40.000 4.85 0.00 38.55 3.50
134 135 5.215160 CGACATTTTCTCCTTTTGTGAAGG 58.785 41.667 0.00 0.00 38.78 3.46
135 136 5.682862 CACGACATTTTCTCCTTTTGTGAAG 59.317 40.000 0.00 0.00 0.00 3.02
136 137 5.577835 CACGACATTTTCTCCTTTTGTGAA 58.422 37.500 0.00 0.00 0.00 3.18
137 138 4.497340 GCACGACATTTTCTCCTTTTGTGA 60.497 41.667 0.00 0.00 0.00 3.58
138 139 3.730715 GCACGACATTTTCTCCTTTTGTG 59.269 43.478 0.00 0.00 0.00 3.33
139 140 3.632145 AGCACGACATTTTCTCCTTTTGT 59.368 39.130 0.00 0.00 0.00 2.83
140 141 3.976942 CAGCACGACATTTTCTCCTTTTG 59.023 43.478 0.00 0.00 0.00 2.44
141 142 3.550842 GCAGCACGACATTTTCTCCTTTT 60.551 43.478 0.00 0.00 0.00 2.27
142 143 2.030805 GCAGCACGACATTTTCTCCTTT 60.031 45.455 0.00 0.00 0.00 3.11
143 144 1.537202 GCAGCACGACATTTTCTCCTT 59.463 47.619 0.00 0.00 0.00 3.36
144 145 1.160137 GCAGCACGACATTTTCTCCT 58.840 50.000 0.00 0.00 0.00 3.69
145 146 0.169009 GGCAGCACGACATTTTCTCC 59.831 55.000 0.00 0.00 0.00 3.71
146 147 0.179215 CGGCAGCACGACATTTTCTC 60.179 55.000 0.00 0.00 35.47 2.87
147 148 0.884704 ACGGCAGCACGACATTTTCT 60.885 50.000 9.87 0.00 37.61 2.52
148 149 0.040425 AACGGCAGCACGACATTTTC 60.040 50.000 9.87 0.00 37.61 2.29
149 150 0.317770 CAACGGCAGCACGACATTTT 60.318 50.000 9.87 0.00 37.61 1.82
150 151 1.282570 CAACGGCAGCACGACATTT 59.717 52.632 9.87 0.00 37.61 2.32
151 152 2.945984 CAACGGCAGCACGACATT 59.054 55.556 9.87 0.00 37.61 2.71
152 153 3.726517 GCAACGGCAGCACGACAT 61.727 61.111 9.87 0.00 40.72 3.06
171 172 3.998672 TTCACTGGACCGGACGGC 61.999 66.667 9.46 3.69 39.32 5.68
172 173 2.048503 GTTCACTGGACCGGACGG 60.049 66.667 9.46 9.56 42.03 4.79
173 174 2.048503 GGTTCACTGGACCGGACG 60.049 66.667 9.46 0.00 0.00 4.79
174 175 1.004918 CTGGTTCACTGGACCGGAC 60.005 63.158 9.46 0.00 44.70 4.79
175 176 3.466881 CTGGTTCACTGGACCGGA 58.533 61.111 9.46 0.00 44.70 5.14
176 177 0.602905 GTTCTGGTTCACTGGACCGG 60.603 60.000 8.96 8.96 43.54 5.28
177 178 0.393077 AGTTCTGGTTCACTGGACCG 59.607 55.000 1.79 0.00 40.13 4.79
178 179 2.028020 CCTAGTTCTGGTTCACTGGACC 60.028 54.545 0.00 0.00 37.69 4.46
179 180 2.028020 CCCTAGTTCTGGTTCACTGGAC 60.028 54.545 0.00 0.00 0.00 4.02
180 181 2.257207 CCCTAGTTCTGGTTCACTGGA 58.743 52.381 0.00 0.00 0.00 3.86
181 182 1.978580 ACCCTAGTTCTGGTTCACTGG 59.021 52.381 0.00 0.00 0.00 4.00
182 183 3.771577 AACCCTAGTTCTGGTTCACTG 57.228 47.619 0.00 0.00 40.87 3.66
183 184 3.072622 GGAAACCCTAGTTCTGGTTCACT 59.927 47.826 2.10 0.00 43.94 3.41
184 185 3.409570 GGAAACCCTAGTTCTGGTTCAC 58.590 50.000 2.10 1.21 43.94 3.18
185 186 3.782656 GGAAACCCTAGTTCTGGTTCA 57.217 47.619 2.10 0.00 43.94 3.18
209 210 1.522580 GTGCCCCTCTTCGAGCATC 60.523 63.158 0.00 0.00 37.60 3.91
210 211 1.841302 TTGTGCCCCTCTTCGAGCAT 61.841 55.000 0.00 0.00 37.60 3.79
211 212 2.454832 CTTGTGCCCCTCTTCGAGCA 62.455 60.000 0.00 0.00 0.00 4.26
212 213 1.743252 CTTGTGCCCCTCTTCGAGC 60.743 63.158 0.00 0.00 0.00 5.03
213 214 0.321671 TTCTTGTGCCCCTCTTCGAG 59.678 55.000 0.00 0.00 0.00 4.04
214 215 0.984230 ATTCTTGTGCCCCTCTTCGA 59.016 50.000 0.00 0.00 0.00 3.71
215 216 1.089920 CATTCTTGTGCCCCTCTTCG 58.910 55.000 0.00 0.00 0.00 3.79
216 217 0.813821 GCATTCTTGTGCCCCTCTTC 59.186 55.000 0.00 0.00 39.18 2.87
217 218 0.112995 TGCATTCTTGTGCCCCTCTT 59.887 50.000 0.00 0.00 44.43 2.85
218 219 0.333993 ATGCATTCTTGTGCCCCTCT 59.666 50.000 0.00 0.00 44.43 3.69
219 220 0.743097 GATGCATTCTTGTGCCCCTC 59.257 55.000 0.00 0.00 44.43 4.30
220 221 0.040058 TGATGCATTCTTGTGCCCCT 59.960 50.000 0.00 0.00 44.43 4.79
221 222 0.896923 TTGATGCATTCTTGTGCCCC 59.103 50.000 0.00 0.00 44.43 5.80
222 223 2.231964 TCTTTGATGCATTCTTGTGCCC 59.768 45.455 0.00 0.00 44.43 5.36
223 224 3.581024 TCTTTGATGCATTCTTGTGCC 57.419 42.857 0.00 0.00 44.43 5.01
224 225 3.924686 CCTTCTTTGATGCATTCTTGTGC 59.075 43.478 0.00 0.00 45.25 4.57
225 226 4.491676 CCCTTCTTTGATGCATTCTTGTG 58.508 43.478 0.00 0.00 0.00 3.33
226 227 3.512724 CCCCTTCTTTGATGCATTCTTGT 59.487 43.478 0.00 0.00 0.00 3.16
227 228 3.765511 TCCCCTTCTTTGATGCATTCTTG 59.234 43.478 0.00 0.00 0.00 3.02
228 229 3.766051 GTCCCCTTCTTTGATGCATTCTT 59.234 43.478 0.00 0.00 0.00 2.52
229 230 3.359950 GTCCCCTTCTTTGATGCATTCT 58.640 45.455 0.00 0.00 0.00 2.40
230 231 2.098117 CGTCCCCTTCTTTGATGCATTC 59.902 50.000 0.00 0.00 0.00 2.67
231 232 2.094675 CGTCCCCTTCTTTGATGCATT 58.905 47.619 0.00 0.00 0.00 3.56
232 233 1.281867 TCGTCCCCTTCTTTGATGCAT 59.718 47.619 0.00 0.00 0.00 3.96
233 234 0.690192 TCGTCCCCTTCTTTGATGCA 59.310 50.000 0.00 0.00 0.00 3.96
234 235 1.087501 GTCGTCCCCTTCTTTGATGC 58.912 55.000 0.00 0.00 0.00 3.91
235 236 2.076863 GTGTCGTCCCCTTCTTTGATG 58.923 52.381 0.00 0.00 0.00 3.07
236 237 1.003233 GGTGTCGTCCCCTTCTTTGAT 59.997 52.381 0.00 0.00 0.00 2.57
237 238 0.395312 GGTGTCGTCCCCTTCTTTGA 59.605 55.000 0.00 0.00 0.00 2.69
238 239 0.605589 GGGTGTCGTCCCCTTCTTTG 60.606 60.000 0.00 0.00 41.54 2.77
239 240 1.057851 TGGGTGTCGTCCCCTTCTTT 61.058 55.000 9.69 0.00 46.48 2.52
240 241 0.840722 ATGGGTGTCGTCCCCTTCTT 60.841 55.000 9.69 0.00 46.48 2.52
241 242 0.042131 TATGGGTGTCGTCCCCTTCT 59.958 55.000 9.69 0.00 46.48 2.85
242 243 0.464452 CTATGGGTGTCGTCCCCTTC 59.536 60.000 9.69 0.00 46.48 3.46
243 244 0.981277 CCTATGGGTGTCGTCCCCTT 60.981 60.000 9.69 5.80 46.48 3.95
244 245 1.382695 CCTATGGGTGTCGTCCCCT 60.383 63.158 9.69 4.15 46.48 4.79
245 246 1.688187 ACCTATGGGTGTCGTCCCC 60.688 63.158 0.00 5.49 46.48 4.81
246 247 4.045469 ACCTATGGGTGTCGTCCC 57.955 61.111 0.00 6.23 45.43 4.46
255 256 3.849951 AGCGGCGTGACCTATGGG 61.850 66.667 9.37 0.00 35.61 4.00
256 257 2.586079 CAGCGGCGTGACCTATGG 60.586 66.667 9.37 0.00 35.61 2.74
257 258 3.264897 GCAGCGGCGTGACCTATG 61.265 66.667 9.37 0.00 35.61 2.23
258 259 4.530857 GGCAGCGGCGTGACCTAT 62.531 66.667 9.37 0.00 42.47 2.57
263 264 4.471908 ATGATGGCAGCGGCGTGA 62.472 61.111 9.37 0.00 42.47 4.35
264 265 3.945434 GATGATGGCAGCGGCGTG 61.945 66.667 9.37 6.94 42.47 5.34
274 275 1.233285 GCTAGGCTTGCCGATGATGG 61.233 60.000 9.92 0.00 0.00 3.51
275 276 0.533531 TGCTAGGCTTGCCGATGATG 60.534 55.000 18.00 0.00 0.00 3.07
276 277 0.250209 CTGCTAGGCTTGCCGATGAT 60.250 55.000 18.00 0.00 0.00 2.45
277 278 1.144716 CTGCTAGGCTTGCCGATGA 59.855 57.895 18.00 0.00 0.00 2.92
278 279 1.890979 CCTGCTAGGCTTGCCGATG 60.891 63.158 18.00 6.02 0.00 3.84
279 280 2.507944 CCTGCTAGGCTTGCCGAT 59.492 61.111 18.00 0.00 0.00 4.18
280 281 3.785859 CCCTGCTAGGCTTGCCGA 61.786 66.667 18.00 0.00 32.73 5.54
281 282 3.112205 ATCCCTGCTAGGCTTGCCG 62.112 63.158 18.00 11.66 32.73 5.69
282 283 1.228094 GATCCCTGCTAGGCTTGCC 60.228 63.158 18.00 2.97 32.73 4.52
283 284 1.596477 CGATCCCTGCTAGGCTTGC 60.596 63.158 14.14 14.14 32.73 4.01
284 285 0.249657 GACGATCCCTGCTAGGCTTG 60.250 60.000 0.00 0.00 32.73 4.01
285 286 1.739338 CGACGATCCCTGCTAGGCTT 61.739 60.000 0.00 0.00 32.73 4.35
286 287 2.196925 CGACGATCCCTGCTAGGCT 61.197 63.158 0.00 0.00 32.73 4.58
287 288 2.336809 CGACGATCCCTGCTAGGC 59.663 66.667 0.00 0.00 32.73 3.93
288 289 2.336809 GCGACGATCCCTGCTAGG 59.663 66.667 0.00 0.00 34.30 3.02
289 290 2.050895 CGCGACGATCCCTGCTAG 60.051 66.667 0.00 0.00 0.00 3.42
290 291 3.592814 CCGCGACGATCCCTGCTA 61.593 66.667 8.23 0.00 0.00 3.49
294 295 4.889112 TAGGCCGCGACGATCCCT 62.889 66.667 8.23 5.67 0.00 4.20
295 296 3.681835 ATAGGCCGCGACGATCCC 61.682 66.667 8.23 0.00 0.00 3.85
296 297 2.430921 CATAGGCCGCGACGATCC 60.431 66.667 8.23 0.00 0.00 3.36
297 298 1.729838 GTCATAGGCCGCGACGATC 60.730 63.158 8.23 0.00 0.00 3.69
298 299 2.335369 GTCATAGGCCGCGACGAT 59.665 61.111 8.23 0.00 0.00 3.73
299 300 3.896133 GGTCATAGGCCGCGACGA 61.896 66.667 8.23 0.00 0.00 4.20
306 307 1.092348 GGTTTGTTCGGTCATAGGCC 58.908 55.000 0.00 0.00 0.00 5.19
307 308 1.092348 GGGTTTGTTCGGTCATAGGC 58.908 55.000 0.00 0.00 0.00 3.93
308 309 2.483014 TGGGTTTGTTCGGTCATAGG 57.517 50.000 0.00 0.00 0.00 2.57
309 310 4.277423 ACTTTTGGGTTTGTTCGGTCATAG 59.723 41.667 0.00 0.00 0.00 2.23
310 311 4.208746 ACTTTTGGGTTTGTTCGGTCATA 58.791 39.130 0.00 0.00 0.00 2.15
311 312 3.028130 ACTTTTGGGTTTGTTCGGTCAT 58.972 40.909 0.00 0.00 0.00 3.06
312 313 2.448453 ACTTTTGGGTTTGTTCGGTCA 58.552 42.857 0.00 0.00 0.00 4.02
313 314 3.513680 AACTTTTGGGTTTGTTCGGTC 57.486 42.857 0.00 0.00 0.00 4.79
314 315 3.591023 CAAACTTTTGGGTTTGTTCGGT 58.409 40.909 10.69 0.00 46.17 4.69
321 322 3.540617 GGTCATGCAAACTTTTGGGTTT 58.459 40.909 3.95 0.00 39.62 3.27
322 323 2.482839 CGGTCATGCAAACTTTTGGGTT 60.483 45.455 3.95 0.00 38.57 4.11
323 324 1.068434 CGGTCATGCAAACTTTTGGGT 59.932 47.619 3.95 0.00 38.57 4.51
324 325 1.339610 TCGGTCATGCAAACTTTTGGG 59.660 47.619 3.95 0.00 38.57 4.12
325 326 2.791383 TCGGTCATGCAAACTTTTGG 57.209 45.000 3.95 0.00 38.57 3.28
326 327 3.443037 TGTTCGGTCATGCAAACTTTTG 58.557 40.909 0.00 0.00 41.03 2.44
327 328 3.791973 TGTTCGGTCATGCAAACTTTT 57.208 38.095 0.00 0.00 0.00 2.27
328 329 3.791973 TTGTTCGGTCATGCAAACTTT 57.208 38.095 0.00 0.00 0.00 2.66
329 330 3.443976 GTTTGTTCGGTCATGCAAACTT 58.556 40.909 13.73 0.00 44.03 2.66
330 331 2.223711 GGTTTGTTCGGTCATGCAAACT 60.224 45.455 17.92 0.00 45.63 2.66
331 332 2.124122 GGTTTGTTCGGTCATGCAAAC 58.876 47.619 13.01 13.01 45.62 2.93
332 333 1.067821 GGGTTTGTTCGGTCATGCAAA 59.932 47.619 0.00 0.00 0.00 3.68
333 334 0.671251 GGGTTTGTTCGGTCATGCAA 59.329 50.000 0.00 0.00 0.00 4.08
334 335 0.466372 TGGGTTTGTTCGGTCATGCA 60.466 50.000 0.00 0.00 0.00 3.96
335 336 0.671251 TTGGGTTTGTTCGGTCATGC 59.329 50.000 0.00 0.00 0.00 4.06
336 337 3.380142 CTTTTGGGTTTGTTCGGTCATG 58.620 45.455 0.00 0.00 0.00 3.07
337 338 2.223947 GCTTTTGGGTTTGTTCGGTCAT 60.224 45.455 0.00 0.00 0.00 3.06
338 339 1.135333 GCTTTTGGGTTTGTTCGGTCA 59.865 47.619 0.00 0.00 0.00 4.02
339 340 1.537348 GGCTTTTGGGTTTGTTCGGTC 60.537 52.381 0.00 0.00 0.00 4.79
340 341 0.462375 GGCTTTTGGGTTTGTTCGGT 59.538 50.000 0.00 0.00 0.00 4.69
341 342 0.596341 CGGCTTTTGGGTTTGTTCGG 60.596 55.000 0.00 0.00 0.00 4.30
342 343 0.382515 TCGGCTTTTGGGTTTGTTCG 59.617 50.000 0.00 0.00 0.00 3.95
343 344 1.868109 GCTCGGCTTTTGGGTTTGTTC 60.868 52.381 0.00 0.00 0.00 3.18
344 345 0.104120 GCTCGGCTTTTGGGTTTGTT 59.896 50.000 0.00 0.00 0.00 2.83
345 346 1.040339 TGCTCGGCTTTTGGGTTTGT 61.040 50.000 0.00 0.00 0.00 2.83
346 347 0.103937 TTGCTCGGCTTTTGGGTTTG 59.896 50.000 0.00 0.00 0.00 2.93
347 348 0.827368 TTTGCTCGGCTTTTGGGTTT 59.173 45.000 0.00 0.00 0.00 3.27
348 349 0.104120 GTTTGCTCGGCTTTTGGGTT 59.896 50.000 0.00 0.00 0.00 4.11
349 350 0.755327 AGTTTGCTCGGCTTTTGGGT 60.755 50.000 0.00 0.00 0.00 4.51
350 351 0.318955 CAGTTTGCTCGGCTTTTGGG 60.319 55.000 0.00 0.00 0.00 4.12
351 352 0.667993 TCAGTTTGCTCGGCTTTTGG 59.332 50.000 0.00 0.00 0.00 3.28
352 353 1.065401 TGTCAGTTTGCTCGGCTTTTG 59.935 47.619 0.00 0.00 0.00 2.44
353 354 1.388547 TGTCAGTTTGCTCGGCTTTT 58.611 45.000 0.00 0.00 0.00 2.27
354 355 1.609208 ATGTCAGTTTGCTCGGCTTT 58.391 45.000 0.00 0.00 0.00 3.51
355 356 1.267806 CAATGTCAGTTTGCTCGGCTT 59.732 47.619 0.00 0.00 0.00 4.35
356 357 0.877071 CAATGTCAGTTTGCTCGGCT 59.123 50.000 0.00 0.00 0.00 5.52
357 358 0.109597 CCAATGTCAGTTTGCTCGGC 60.110 55.000 0.00 0.00 0.00 5.54
358 359 1.466167 CTCCAATGTCAGTTTGCTCGG 59.534 52.381 0.00 0.00 0.00 4.63
359 360 1.466167 CCTCCAATGTCAGTTTGCTCG 59.534 52.381 0.00 0.00 0.00 5.03
360 361 2.227388 CACCTCCAATGTCAGTTTGCTC 59.773 50.000 0.00 0.00 0.00 4.26
361 362 2.233271 CACCTCCAATGTCAGTTTGCT 58.767 47.619 0.00 0.00 0.00 3.91
362 363 1.270550 CCACCTCCAATGTCAGTTTGC 59.729 52.381 0.00 0.00 0.00 3.68
363 364 2.862541 TCCACCTCCAATGTCAGTTTG 58.137 47.619 0.00 0.00 0.00 2.93
364 365 3.814504 ATCCACCTCCAATGTCAGTTT 57.185 42.857 0.00 0.00 0.00 2.66
365 366 3.814504 AATCCACCTCCAATGTCAGTT 57.185 42.857 0.00 0.00 0.00 3.16
366 367 3.424703 CAAATCCACCTCCAATGTCAGT 58.575 45.455 0.00 0.00 0.00 3.41
367 368 2.165030 GCAAATCCACCTCCAATGTCAG 59.835 50.000 0.00 0.00 0.00 3.51
368 369 2.170166 GCAAATCCACCTCCAATGTCA 58.830 47.619 0.00 0.00 0.00 3.58
369 370 2.450476 AGCAAATCCACCTCCAATGTC 58.550 47.619 0.00 0.00 0.00 3.06
370 371 2.610438 AGCAAATCCACCTCCAATGT 57.390 45.000 0.00 0.00 0.00 2.71
371 372 3.094572 AGAAGCAAATCCACCTCCAATG 58.905 45.455 0.00 0.00 0.00 2.82
372 373 3.463048 AGAAGCAAATCCACCTCCAAT 57.537 42.857 0.00 0.00 0.00 3.16
373 374 2.978156 AGAAGCAAATCCACCTCCAA 57.022 45.000 0.00 0.00 0.00 3.53
374 375 2.376518 AGAAGAAGCAAATCCACCTCCA 59.623 45.455 0.00 0.00 0.00 3.86
375 376 3.078891 AGAAGAAGCAAATCCACCTCC 57.921 47.619 0.00 0.00 0.00 4.30
376 377 3.823304 ACAAGAAGAAGCAAATCCACCTC 59.177 43.478 0.00 0.00 0.00 3.85
377 378 3.837355 ACAAGAAGAAGCAAATCCACCT 58.163 40.909 0.00 0.00 0.00 4.00
378 379 4.590850 AACAAGAAGAAGCAAATCCACC 57.409 40.909 0.00 0.00 0.00 4.61
379 380 4.676924 CGAAACAAGAAGAAGCAAATCCAC 59.323 41.667 0.00 0.00 0.00 4.02
380 381 4.578516 TCGAAACAAGAAGAAGCAAATCCA 59.421 37.500 0.00 0.00 0.00 3.41
381 382 5.108385 TCGAAACAAGAAGAAGCAAATCC 57.892 39.130 0.00 0.00 0.00 3.01
382 383 5.049405 TCCTCGAAACAAGAAGAAGCAAATC 60.049 40.000 0.00 0.00 0.00 2.17
383 384 4.821805 TCCTCGAAACAAGAAGAAGCAAAT 59.178 37.500 0.00 0.00 0.00 2.32
384 385 4.196193 TCCTCGAAACAAGAAGAAGCAAA 58.804 39.130 0.00 0.00 0.00 3.68
385 386 3.804036 TCCTCGAAACAAGAAGAAGCAA 58.196 40.909 0.00 0.00 0.00 3.91
386 387 3.469008 TCCTCGAAACAAGAAGAAGCA 57.531 42.857 0.00 0.00 0.00 3.91
387 388 6.457528 CCAATATCCTCGAAACAAGAAGAAGC 60.458 42.308 0.00 0.00 0.00 3.86
388 389 6.818644 TCCAATATCCTCGAAACAAGAAGAAG 59.181 38.462 0.00 0.00 0.00 2.85
389 390 6.707290 TCCAATATCCTCGAAACAAGAAGAA 58.293 36.000 0.00 0.00 0.00 2.52
390 391 6.294361 TCCAATATCCTCGAAACAAGAAGA 57.706 37.500 0.00 0.00 0.00 2.87
391 392 5.525378 CCTCCAATATCCTCGAAACAAGAAG 59.475 44.000 0.00 0.00 0.00 2.85
392 393 5.045869 ACCTCCAATATCCTCGAAACAAGAA 60.046 40.000 0.00 0.00 0.00 2.52
393 394 4.469945 ACCTCCAATATCCTCGAAACAAGA 59.530 41.667 0.00 0.00 0.00 3.02
394 395 4.572389 CACCTCCAATATCCTCGAAACAAG 59.428 45.833 0.00 0.00 0.00 3.16
395 396 4.513442 CACCTCCAATATCCTCGAAACAA 58.487 43.478 0.00 0.00 0.00 2.83
396 397 3.118408 CCACCTCCAATATCCTCGAAACA 60.118 47.826 0.00 0.00 0.00 2.83
397 398 3.467803 CCACCTCCAATATCCTCGAAAC 58.532 50.000 0.00 0.00 0.00 2.78
398 399 2.158813 GCCACCTCCAATATCCTCGAAA 60.159 50.000 0.00 0.00 0.00 3.46
399 400 1.416401 GCCACCTCCAATATCCTCGAA 59.584 52.381 0.00 0.00 0.00 3.71
400 401 1.048601 GCCACCTCCAATATCCTCGA 58.951 55.000 0.00 0.00 0.00 4.04
401 402 0.035458 GGCCACCTCCAATATCCTCG 59.965 60.000 0.00 0.00 0.00 4.63
402 403 0.402121 GGGCCACCTCCAATATCCTC 59.598 60.000 4.39 0.00 0.00 3.71
403 404 0.328450 TGGGCCACCTCCAATATCCT 60.328 55.000 0.00 0.00 37.76 3.24
404 405 0.178990 GTGGGCCACCTCCAATATCC 60.179 60.000 26.51 0.00 35.86 2.59
405 406 0.550914 TGTGGGCCACCTCCAATATC 59.449 55.000 32.61 5.31 35.86 1.63
406 407 0.552848 CTGTGGGCCACCTCCAATAT 59.447 55.000 32.61 0.00 35.86 1.28
407 408 0.548926 TCTGTGGGCCACCTCCAATA 60.549 55.000 32.61 12.20 35.86 1.90
408 409 1.852157 TCTGTGGGCCACCTCCAAT 60.852 57.895 32.61 0.00 35.86 3.16
409 410 2.449518 TCTGTGGGCCACCTCCAA 60.450 61.111 32.61 13.72 35.86 3.53
410 411 3.249189 GTCTGTGGGCCACCTCCA 61.249 66.667 32.61 14.18 37.76 3.86
411 412 2.529744 AAGTCTGTGGGCCACCTCC 61.530 63.158 32.61 19.48 37.76 4.30
412 413 1.302832 CAAGTCTGTGGGCCACCTC 60.303 63.158 32.61 21.50 37.76 3.85
413 414 1.352622 TTCAAGTCTGTGGGCCACCT 61.353 55.000 32.61 20.09 37.76 4.00
414 415 0.890996 CTTCAAGTCTGTGGGCCACC 60.891 60.000 32.61 18.08 32.73 4.61
415 416 0.108585 TCTTCAAGTCTGTGGGCCAC 59.891 55.000 29.75 29.75 34.56 5.01
416 417 1.003580 GATCTTCAAGTCTGTGGGCCA 59.996 52.381 0.00 0.00 0.00 5.36
417 418 1.280421 AGATCTTCAAGTCTGTGGGCC 59.720 52.381 0.00 0.00 0.00 5.80
418 419 2.777832 AGATCTTCAAGTCTGTGGGC 57.222 50.000 0.00 0.00 0.00 5.36
419 420 3.755378 CCAAAGATCTTCAAGTCTGTGGG 59.245 47.826 8.78 4.17 43.34 4.61
420 421 3.755378 CCCAAAGATCTTCAAGTCTGTGG 59.245 47.826 8.78 14.80 45.58 4.17
421 422 4.645535 TCCCAAAGATCTTCAAGTCTGTG 58.354 43.478 8.78 0.41 30.93 3.66
422 423 4.594920 TCTCCCAAAGATCTTCAAGTCTGT 59.405 41.667 8.78 0.00 0.00 3.41
423 424 4.934602 GTCTCCCAAAGATCTTCAAGTCTG 59.065 45.833 8.78 1.93 36.11 3.51
424 425 4.843516 AGTCTCCCAAAGATCTTCAAGTCT 59.156 41.667 8.78 4.73 36.11 3.24
425 426 5.159273 AGTCTCCCAAAGATCTTCAAGTC 57.841 43.478 8.78 2.65 36.11 3.01
426 427 5.782845 AGTAGTCTCCCAAAGATCTTCAAGT 59.217 40.000 8.78 0.00 36.11 3.16
427 428 6.293004 AGTAGTCTCCCAAAGATCTTCAAG 57.707 41.667 8.78 4.45 36.11 3.02
428 429 6.498651 AGAAGTAGTCTCCCAAAGATCTTCAA 59.501 38.462 8.78 0.00 39.17 2.69
429 430 6.019748 AGAAGTAGTCTCCCAAAGATCTTCA 58.980 40.000 8.78 0.00 39.17 3.02
430 431 6.538945 AGAAGTAGTCTCCCAAAGATCTTC 57.461 41.667 8.78 0.00 38.22 2.87
431 432 6.271159 ACAAGAAGTAGTCTCCCAAAGATCTT 59.729 38.462 0.88 0.88 34.56 2.40
432 433 5.782845 ACAAGAAGTAGTCTCCCAAAGATCT 59.217 40.000 0.00 0.00 34.56 2.75
433 434 5.872070 CACAAGAAGTAGTCTCCCAAAGATC 59.128 44.000 0.00 0.00 34.56 2.75
434 435 5.799213 CACAAGAAGTAGTCTCCCAAAGAT 58.201 41.667 0.00 0.00 34.56 2.40
435 436 4.503296 GCACAAGAAGTAGTCTCCCAAAGA 60.503 45.833 0.00 0.00 34.56 2.52
436 437 3.748568 GCACAAGAAGTAGTCTCCCAAAG 59.251 47.826 0.00 0.00 34.56 2.77
437 438 3.391296 AGCACAAGAAGTAGTCTCCCAAA 59.609 43.478 0.00 0.00 34.56 3.28
438 439 2.972713 AGCACAAGAAGTAGTCTCCCAA 59.027 45.455 0.00 0.00 34.56 4.12
439 440 2.563179 GAGCACAAGAAGTAGTCTCCCA 59.437 50.000 0.00 0.00 34.56 4.37
440 441 2.829120 AGAGCACAAGAAGTAGTCTCCC 59.171 50.000 0.00 0.00 34.56 4.30
441 442 5.047943 TGTTAGAGCACAAGAAGTAGTCTCC 60.048 44.000 0.00 0.00 34.56 3.71
442 443 6.015027 TGTTAGAGCACAAGAAGTAGTCTC 57.985 41.667 0.00 0.00 34.56 3.36
443 444 6.393990 CATGTTAGAGCACAAGAAGTAGTCT 58.606 40.000 0.00 0.00 38.69 3.24
444 445 5.578727 CCATGTTAGAGCACAAGAAGTAGTC 59.421 44.000 0.00 0.00 0.00 2.59
445 446 5.246203 TCCATGTTAGAGCACAAGAAGTAGT 59.754 40.000 0.00 0.00 0.00 2.73
446 447 5.724328 TCCATGTTAGAGCACAAGAAGTAG 58.276 41.667 0.00 0.00 0.00 2.57
447 448 5.738619 TCCATGTTAGAGCACAAGAAGTA 57.261 39.130 0.00 0.00 0.00 2.24
448 449 4.623932 TCCATGTTAGAGCACAAGAAGT 57.376 40.909 0.00 0.00 0.00 3.01
449 450 6.320171 CAAATCCATGTTAGAGCACAAGAAG 58.680 40.000 0.00 0.00 0.00 2.85
450 451 5.335897 GCAAATCCATGTTAGAGCACAAGAA 60.336 40.000 0.00 0.00 0.00 2.52
451 452 4.156556 GCAAATCCATGTTAGAGCACAAGA 59.843 41.667 0.00 0.00 0.00 3.02
452 453 4.157289 AGCAAATCCATGTTAGAGCACAAG 59.843 41.667 0.00 0.00 0.00 3.16
453 454 4.081406 AGCAAATCCATGTTAGAGCACAA 58.919 39.130 0.00 0.00 0.00 3.33
454 455 3.441222 CAGCAAATCCATGTTAGAGCACA 59.559 43.478 0.00 0.00 0.00 4.57
455 456 3.181493 CCAGCAAATCCATGTTAGAGCAC 60.181 47.826 0.00 0.00 0.00 4.40
456 457 3.018856 CCAGCAAATCCATGTTAGAGCA 58.981 45.455 0.00 0.00 0.00 4.26
457 458 2.223665 GCCAGCAAATCCATGTTAGAGC 60.224 50.000 0.00 0.00 0.00 4.09
458 459 2.360165 GGCCAGCAAATCCATGTTAGAG 59.640 50.000 0.00 0.00 0.00 2.43
459 460 2.291475 TGGCCAGCAAATCCATGTTAGA 60.291 45.455 0.00 0.00 0.00 2.10
460 461 2.101783 TGGCCAGCAAATCCATGTTAG 58.898 47.619 0.00 0.00 0.00 2.34
461 462 2.228545 TGGCCAGCAAATCCATGTTA 57.771 45.000 0.00 0.00 0.00 2.41
462 463 1.575419 ATGGCCAGCAAATCCATGTT 58.425 45.000 13.05 0.00 39.01 2.71
463 464 3.310352 ATGGCCAGCAAATCCATGT 57.690 47.368 13.05 0.00 39.01 3.21
465 466 2.097110 ATCATGGCCAGCAAATCCAT 57.903 45.000 13.05 0.00 40.98 3.41
466 467 1.868713 AATCATGGCCAGCAAATCCA 58.131 45.000 13.05 0.00 0.00 3.41
467 468 2.994186 AAATCATGGCCAGCAAATCC 57.006 45.000 13.05 0.00 0.00 3.01
487 488 8.511321 ACGTCTGATTACATAAAGCATGAAAAA 58.489 29.630 0.00 0.00 38.10 1.94
488 489 8.039603 ACGTCTGATTACATAAAGCATGAAAA 57.960 30.769 0.00 0.00 38.10 2.29
489 490 7.609760 ACGTCTGATTACATAAAGCATGAAA 57.390 32.000 0.00 0.00 38.10 2.69
490 491 7.609760 AACGTCTGATTACATAAAGCATGAA 57.390 32.000 0.00 0.00 38.10 2.57
491 492 7.333174 TCAAACGTCTGATTACATAAAGCATGA 59.667 33.333 0.00 0.00 38.10 3.07
492 493 7.426456 GTCAAACGTCTGATTACATAAAGCATG 59.574 37.037 0.00 0.00 40.78 4.06
493 494 7.334421 AGTCAAACGTCTGATTACATAAAGCAT 59.666 33.333 0.00 0.00 31.94 3.79
494 495 6.649141 AGTCAAACGTCTGATTACATAAAGCA 59.351 34.615 0.00 0.00 31.38 3.91
495 496 7.061752 AGTCAAACGTCTGATTACATAAAGC 57.938 36.000 0.00 0.00 0.00 3.51
496 497 7.893236 CGAAGTCAAACGTCTGATTACATAAAG 59.107 37.037 0.00 0.00 0.00 1.85
497 498 7.148705 CCGAAGTCAAACGTCTGATTACATAAA 60.149 37.037 0.00 0.00 0.00 1.40
498 499 6.309494 CCGAAGTCAAACGTCTGATTACATAA 59.691 38.462 0.00 0.00 0.00 1.90
499 500 5.803461 CCGAAGTCAAACGTCTGATTACATA 59.197 40.000 0.00 0.00 0.00 2.29
500 501 4.625742 CCGAAGTCAAACGTCTGATTACAT 59.374 41.667 0.00 0.00 0.00 2.29
501 502 3.985279 CCGAAGTCAAACGTCTGATTACA 59.015 43.478 0.00 0.00 0.00 2.41
502 503 3.181533 GCCGAAGTCAAACGTCTGATTAC 60.182 47.826 0.00 0.00 0.00 1.89
503 504 2.991190 GCCGAAGTCAAACGTCTGATTA 59.009 45.455 0.00 0.00 0.00 1.75
504 505 1.798813 GCCGAAGTCAAACGTCTGATT 59.201 47.619 0.00 0.00 0.00 2.57
505 506 1.270094 TGCCGAAGTCAAACGTCTGAT 60.270 47.619 0.00 0.00 0.00 2.90
506 507 0.103390 TGCCGAAGTCAAACGTCTGA 59.897 50.000 0.00 0.00 0.00 3.27
507 508 1.148310 ATGCCGAAGTCAAACGTCTG 58.852 50.000 0.00 0.00 0.00 3.51
508 509 1.798813 GAATGCCGAAGTCAAACGTCT 59.201 47.619 0.00 0.00 0.00 4.18
509 510 1.798813 AGAATGCCGAAGTCAAACGTC 59.201 47.619 0.00 0.00 0.00 4.34
510 511 1.531149 CAGAATGCCGAAGTCAAACGT 59.469 47.619 0.00 0.00 0.00 3.99
511 512 1.798223 TCAGAATGCCGAAGTCAAACG 59.202 47.619 0.00 0.00 34.76 3.60
512 513 2.548057 TGTCAGAATGCCGAAGTCAAAC 59.452 45.455 0.00 0.00 34.76 2.93
513 514 2.844946 TGTCAGAATGCCGAAGTCAAA 58.155 42.857 0.00 0.00 34.76 2.69
514 515 2.542020 TGTCAGAATGCCGAAGTCAA 57.458 45.000 0.00 0.00 34.76 3.18
515 516 2.028203 TGATGTCAGAATGCCGAAGTCA 60.028 45.455 0.00 0.00 34.76 3.41
516 517 2.621338 TGATGTCAGAATGCCGAAGTC 58.379 47.619 0.00 0.00 34.76 3.01
517 518 2.768253 TGATGTCAGAATGCCGAAGT 57.232 45.000 0.00 0.00 34.76 3.01
518 519 4.627611 AAATGATGTCAGAATGCCGAAG 57.372 40.909 0.00 0.00 34.76 3.79
519 520 5.389859 AAAAATGATGTCAGAATGCCGAA 57.610 34.783 0.00 0.00 34.76 4.30
557 558 9.729281 AGAAAAAGATATGCACCAATTGATTTT 57.271 25.926 7.12 0.00 0.00 1.82
558 559 9.158233 CAGAAAAAGATATGCACCAATTGATTT 57.842 29.630 7.12 0.00 0.00 2.17
561 562 7.039853 TGTCAGAAAAAGATATGCACCAATTGA 60.040 33.333 7.12 0.00 0.00 2.57
562 563 7.092079 TGTCAGAAAAAGATATGCACCAATTG 58.908 34.615 0.00 0.00 0.00 2.32
565 566 6.003326 TCTGTCAGAAAAAGATATGCACCAA 58.997 36.000 0.00 0.00 0.00 3.67
566 567 5.559770 TCTGTCAGAAAAAGATATGCACCA 58.440 37.500 0.00 0.00 0.00 4.17
567 568 6.510799 CGATCTGTCAGAAAAAGATATGCACC 60.511 42.308 6.64 0.00 30.83 5.01
574 575 4.932200 GTGGTCGATCTGTCAGAAAAAGAT 59.068 41.667 6.64 0.00 33.36 2.40
576 577 3.121944 CGTGGTCGATCTGTCAGAAAAAG 59.878 47.826 6.64 0.00 39.71 2.27
578 579 2.672714 CGTGGTCGATCTGTCAGAAAA 58.327 47.619 6.64 0.00 39.71 2.29
582 583 0.733150 TAGCGTGGTCGATCTGTCAG 59.267 55.000 0.00 0.00 39.71 3.51
589 590 1.153823 GCACACTAGCGTGGTCGAT 60.154 57.895 12.62 0.00 45.50 3.59
595 596 5.107337 CCAATTATAGATGCACACTAGCGTG 60.107 44.000 6.52 6.52 46.63 5.34
671 672 6.364976 GCTTTGCTGGTACGTTTGATTTTATT 59.635 34.615 0.00 0.00 0.00 1.40
672 673 5.861787 GCTTTGCTGGTACGTTTGATTTTAT 59.138 36.000 0.00 0.00 0.00 1.40
673 674 5.216648 GCTTTGCTGGTACGTTTGATTTTA 58.783 37.500 0.00 0.00 0.00 1.52
674 675 4.048504 GCTTTGCTGGTACGTTTGATTTT 58.951 39.130 0.00 0.00 0.00 1.82
675 676 3.067461 TGCTTTGCTGGTACGTTTGATTT 59.933 39.130 0.00 0.00 0.00 2.17
688 689 1.930567 AACTTGCAGTTGCTTTGCTG 58.069 45.000 5.62 0.00 42.02 4.41
718 719 1.600957 GGATCCATGATCTGTTGTGCG 59.399 52.381 6.95 0.00 38.91 5.34
719 720 2.928334 AGGATCCATGATCTGTTGTGC 58.072 47.619 15.82 0.00 38.91 4.57
720 721 3.881688 GGAAGGATCCATGATCTGTTGTG 59.118 47.826 15.82 0.00 45.79 3.33
721 722 4.162040 GGAAGGATCCATGATCTGTTGT 57.838 45.455 15.82 0.00 45.79 3.32
738 739 4.201208 CATGTGCGTATGCTTAAGGAAG 57.799 45.455 8.69 0.00 43.34 3.46
792 793 1.072965 CTGTGTGGAAGGAAGGAAGCT 59.927 52.381 0.00 0.00 0.00 3.74
872 884 1.153147 TTTGTGTGGCGCAGGTGTA 60.153 52.632 10.83 0.00 0.00 2.90
942 958 1.369839 GGTAGGCTTGGAGCTTTCGC 61.370 60.000 0.00 0.00 41.99 4.70
943 959 0.250513 AGGTAGGCTTGGAGCTTTCG 59.749 55.000 0.00 0.00 41.99 3.46
1115 1131 4.218578 ATCGCTGCAGCCTCCTCG 62.219 66.667 32.07 17.30 37.91 4.63
1213 1229 2.693762 CGTGCTTCATGGTGGCCTG 61.694 63.158 3.32 0.00 0.00 4.85
1218 1234 1.376424 AGGCTCGTGCTTCATGGTG 60.376 57.895 9.61 0.00 39.59 4.17
1236 1252 3.812262 CATGATCTGAGCATGGTTACCA 58.188 45.455 24.28 6.53 39.48 3.25
1250 1266 2.783609 AGCAACAGACTGCATGATCT 57.216 45.000 11.86 0.00 45.18 2.75
1302 1318 2.445492 ATCAGGTGCACCCCCAAAGG 62.445 60.000 32.29 12.87 36.42 3.11
1304 1320 1.228831 CATCAGGTGCACCCCCAAA 60.229 57.895 32.29 13.57 36.42 3.28
1307 1323 4.447342 CCCATCAGGTGCACCCCC 62.447 72.222 32.29 8.17 36.42 5.40
1312 1328 0.405198 ACACAATCCCATCAGGTGCA 59.595 50.000 0.00 0.00 36.75 4.57
1452 1468 1.542547 GCAAGAAGGAAGACGGAACCA 60.543 52.381 0.00 0.00 0.00 3.67
1582 1600 2.475111 TCATCTGTCGCGTGTTCTTTTC 59.525 45.455 5.77 0.00 0.00 2.29
1697 1821 1.003116 GCATGTATCAAAGCTGCCGAG 60.003 52.381 0.00 0.00 0.00 4.63
1700 1824 2.295885 AGAGCATGTATCAAAGCTGCC 58.704 47.619 0.00 0.00 37.48 4.85
1711 1835 1.272490 GCCGCTATGGTAGAGCATGTA 59.728 52.381 4.49 0.00 40.09 2.29
1715 1839 1.048724 AAGGCCGCTATGGTAGAGCA 61.049 55.000 0.00 0.00 40.09 4.26
1716 1840 0.966920 TAAGGCCGCTATGGTAGAGC 59.033 55.000 0.00 0.00 41.21 4.09
1717 1841 3.963428 AATAAGGCCGCTATGGTAGAG 57.037 47.619 0.00 0.00 41.21 2.43
1718 1842 3.644265 TGAAATAAGGCCGCTATGGTAGA 59.356 43.478 0.00 0.00 41.21 2.59
1719 1843 3.746492 GTGAAATAAGGCCGCTATGGTAG 59.254 47.826 0.00 0.00 41.21 3.18
1720 1844 3.134985 TGTGAAATAAGGCCGCTATGGTA 59.865 43.478 0.00 0.00 41.21 3.25
1758 1884 6.310941 TGTTCACTCCAAAGGGATATTTCAA 58.689 36.000 0.00 0.00 43.91 2.69
1760 1886 8.697507 ATATGTTCACTCCAAAGGGATATTTC 57.302 34.615 0.00 0.00 43.91 2.17
1764 1890 9.793259 GAAATATATGTTCACTCCAAAGGGATA 57.207 33.333 0.00 0.00 43.91 2.59
1802 1932 8.525290 AAACATAATATGCCTTTGCTTACTCT 57.475 30.769 0.00 0.00 38.71 3.24
1836 1966 7.699812 GCATCAATGTAGATGAAAAGGAAGTTC 59.300 37.037 8.03 0.00 46.51 3.01
1838 1968 6.096001 GGCATCAATGTAGATGAAAAGGAAGT 59.904 38.462 8.03 0.00 46.51 3.01
1855 1985 0.401738 CCCCGACCTATGGCATCAAT 59.598 55.000 1.65 0.00 0.00 2.57
1971 2101 7.921786 TTGATAGTTTACCCAGTCAATTCTG 57.078 36.000 0.00 0.00 35.45 3.02
1972 2102 7.393515 GGTTTGATAGTTTACCCAGTCAATTCT 59.606 37.037 0.00 0.00 0.00 2.40
1973 2103 7.535997 GGTTTGATAGTTTACCCAGTCAATTC 58.464 38.462 0.00 0.00 0.00 2.17
2046 2176 1.580815 CGCAATGCAAAAGGGTTTGT 58.419 45.000 5.91 0.00 45.06 2.83
2047 2177 0.235404 GCGCAATGCAAAAGGGTTTG 59.765 50.000 5.91 0.00 45.88 2.93
2048 2178 1.220817 CGCGCAATGCAAAAGGGTTT 61.221 50.000 8.75 0.00 46.97 3.27
2164 2294 6.869695 TGTCAGTGTAGACAAGTAAGTGAAA 58.130 36.000 0.00 0.00 44.92 2.69
2287 2417 1.664151 GATGGCACGTTAACTACCAGC 59.336 52.381 14.10 12.03 33.03 4.85
2387 2555 7.825331 TGTGTTCAGGTAAAATATGTCCAAA 57.175 32.000 0.00 0.00 0.00 3.28
2540 2710 6.317857 GCTACTTTCAAACCAAGCAAGATAG 58.682 40.000 0.00 0.00 0.00 2.08
2690 2860 4.887071 TGAATCCCAATTACGATTTGGAGG 59.113 41.667 14.45 2.95 39.61 4.30
2700 2870 9.515226 TTACATAGGCTTATGAATCCCAATTAC 57.485 33.333 21.50 0.00 39.22 1.89
2717 2910 6.338146 TGTAACTGAGTGTCATTACATAGGC 58.662 40.000 0.00 0.00 38.08 3.93
2744 2937 8.964772 AGAATTTCTCCAGTCCAAAAATATGAG 58.035 33.333 0.00 0.00 0.00 2.90
2755 2948 3.703001 TGGTCAGAATTTCTCCAGTCC 57.297 47.619 3.34 0.00 0.00 3.85
2865 3058 3.650647 TGGAATGCCCAGTGAGTTC 57.349 52.632 0.00 0.00 40.82 3.01
2979 3180 8.634444 GGTCAAACATATGATAGACACTAGAGT 58.366 37.037 10.38 0.00 0.00 3.24
3070 3271 5.382618 AGTACCAACTAGTGTAGTTTCCG 57.617 43.478 0.00 0.00 46.27 4.30
3117 3327 3.274288 GCTAAGTAGAACCTGCATGCTT 58.726 45.455 20.33 4.59 0.00 3.91
3118 3328 2.237143 TGCTAAGTAGAACCTGCATGCT 59.763 45.455 20.33 0.00 0.00 3.79
3168 3378 9.643693 GAAATTATTGAATGGTGACTGAAATGT 57.356 29.630 0.00 0.00 0.00 2.71
3268 3478 4.091549 ACCTTCCGAAGTAACATAGTCCA 58.908 43.478 7.37 0.00 0.00 4.02
3293 3503 9.897744 ATAATATGATGCGGTAACATTTTTCAG 57.102 29.630 0.00 0.00 0.00 3.02
3307 3517 7.547019 AGGAAGTGTATCACATAATATGATGCG 59.453 37.037 7.33 0.00 40.79 4.73
3365 3575 3.368948 GCAGAGAACTCGGAAAAGGAGAT 60.369 47.826 6.19 0.00 35.49 2.75
3384 3594 2.191128 ACCCTGAAGTTAAGCAGCAG 57.809 50.000 0.00 0.00 0.00 4.24
3408 3618 8.359642 GCTCCCATAACATAGAAATATTTTGCA 58.640 33.333 1.43 0.00 0.00 4.08
3420 3630 3.007398 GGTCAGGAGCTCCCATAACATAG 59.993 52.174 29.54 8.10 37.41 2.23
3483 3698 7.466804 AGAATGAAGTTAACCCTTAATGGTCA 58.533 34.615 2.61 0.00 37.76 4.02
3484 3699 7.201617 CGAGAATGAAGTTAACCCTTAATGGTC 60.202 40.741 2.61 0.00 37.76 4.02
3531 3887 9.401058 CCATCTTTTGAGAACCTTACTATTGAT 57.599 33.333 0.00 0.00 0.00 2.57
3535 3891 7.918076 TGTCCATCTTTTGAGAACCTTACTAT 58.082 34.615 0.00 0.00 0.00 2.12
3538 3894 5.998363 ACTGTCCATCTTTTGAGAACCTTAC 59.002 40.000 0.00 0.00 0.00 2.34
3746 4207 7.531716 TGTAAAACAACACTTACCACAAGAAG 58.468 34.615 0.00 0.00 0.00 2.85
3819 4280 7.917505 GTCATGTTTCATTCTCTTTGTCAACTT 59.082 33.333 0.00 0.00 0.00 2.66
3823 4284 6.513884 GCAGTCATGTTTCATTCTCTTTGTCA 60.514 38.462 0.00 0.00 0.00 3.58
4050 4513 6.334102 ACATGAGTTTTTCTCTCTACTCGT 57.666 37.500 0.00 0.00 43.13 4.18
4061 4524 3.188895 GTCAGCGGACATGAGTTTTTC 57.811 47.619 12.41 0.00 43.73 2.29
4114 4584 3.261981 AGGATGTTCCTTACGCGAAAT 57.738 42.857 15.93 0.00 46.91 2.17
4146 4616 3.684788 ACATCCATTTGTTCAGCGTCTAC 59.315 43.478 0.00 0.00 0.00 2.59
4487 4968 4.697828 TGTTGCAAGTCTGAAAACACTGTA 59.302 37.500 0.00 0.00 30.19 2.74
4492 4973 4.217334 TCTGTTGTTGCAAGTCTGAAAACA 59.783 37.500 0.00 0.00 32.12 2.83
4505 4986 3.674753 GGCACATATTGTTCTGTTGTTGC 59.325 43.478 0.00 0.00 0.00 4.17
4508 4989 5.072741 AGAAGGCACATATTGTTCTGTTGT 58.927 37.500 0.00 0.00 0.00 3.32
4516 4997 4.832248 TCTCGAAAGAAGGCACATATTGT 58.168 39.130 0.00 0.00 41.32 2.71
4769 5252 4.617959 TGTTGTAGCGGATCAGTAATAGC 58.382 43.478 0.00 0.00 0.00 2.97
4784 5267 6.373779 CATTGCTTGACCTAAGTTGTTGTAG 58.626 40.000 0.00 0.00 38.70 2.74
4873 5357 1.536709 GGCTGCAAACAAGAAGGTGTG 60.537 52.381 0.50 0.00 0.00 3.82
5050 5534 6.942532 TGTCTATCTCACATAAAATTGGCC 57.057 37.500 0.00 0.00 0.00 5.36
5063 5547 6.544928 TTTGCTACCTTCATGTCTATCTCA 57.455 37.500 0.00 0.00 0.00 3.27
5095 5579 1.093159 GCTGCAGTCCCAGAAATCTG 58.907 55.000 16.64 3.37 43.40 2.90
5097 5581 0.034670 AGGCTGCAGTCCCAGAAATC 60.035 55.000 16.31 0.00 34.77 2.17
5320 5804 6.327887 AGGTATTTCTCCTTGGGATTAGAGAC 59.672 42.308 0.00 0.00 35.18 3.36
5416 5901 6.204688 CACAAAAGGTTACTGCAGTAGATGAA 59.795 38.462 24.79 10.63 0.00 2.57
5439 5926 6.480320 ACGAATATTCTGCACTTCCTATTCAC 59.520 38.462 13.45 0.00 0.00 3.18
5512 5999 4.666512 AGAATACATGCAAGGGTCAGTTT 58.333 39.130 0.00 0.00 0.00 2.66
5623 6111 6.102174 GGGTTAATTTTCCTCCTGGGACTATA 59.898 42.308 0.00 0.00 45.03 1.31
5736 6224 1.816835 AGTGGAGCTTTGCACATCATG 59.183 47.619 0.60 0.00 0.00 3.07
5750 6238 2.548875 GCAGAAGCATCAGTAGTGGAG 58.451 52.381 0.00 0.00 41.58 3.86
5817 6305 6.099990 GGGGTTAAGAAAGGCTACTATTCTCT 59.900 42.308 0.00 0.00 32.45 3.10
5818 6306 6.099990 AGGGGTTAAGAAAGGCTACTATTCTC 59.900 42.308 0.00 0.00 32.45 2.87
5819 6307 5.971260 AGGGGTTAAGAAAGGCTACTATTCT 59.029 40.000 0.00 0.00 35.00 2.40
5820 6308 6.249911 AGGGGTTAAGAAAGGCTACTATTC 57.750 41.667 0.00 0.00 0.00 1.75
5822 6310 5.163332 CGAAGGGGTTAAGAAAGGCTACTAT 60.163 44.000 0.00 0.00 0.00 2.12
5823 6311 4.161001 CGAAGGGGTTAAGAAAGGCTACTA 59.839 45.833 0.00 0.00 0.00 1.82
5825 6313 3.268330 CGAAGGGGTTAAGAAAGGCTAC 58.732 50.000 0.00 0.00 0.00 3.58
5957 6468 5.188988 TGTAAAGTAGCAGTAGGAGAGGA 57.811 43.478 0.00 0.00 0.00 3.71
5962 6473 7.361457 AGCATTATGTAAAGTAGCAGTAGGA 57.639 36.000 0.00 0.00 0.00 2.94
5988 6499 5.395682 ACTTAGGTTATACAACTCACGCA 57.604 39.130 0.00 0.00 34.88 5.24
6186 6698 3.766591 AGTCGAGGAACATCATGAACTCT 59.233 43.478 0.00 0.00 0.00 3.24
6201 6713 1.749634 ACGGACCTGAATAAGTCGAGG 59.250 52.381 0.00 0.00 33.66 4.63
6597 7118 0.036952 TGAAGAGAAAGAGCAGGCGG 60.037 55.000 0.00 0.00 0.00 6.13
6688 7209 6.327154 TGATGACATTCATGCAAAACTGATC 58.673 36.000 0.00 0.00 37.20 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.