Multiple sequence alignment - TraesCS2A01G123800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G123800 chr2A 100.000 9602 0 0 1 9602 73166916 73157315 0.000000e+00 17732.0
1 TraesCS2A01G123800 chr2A 75.895 419 49 19 5523 5900 471219647 471220054 5.960000e-37 167.0
2 TraesCS2A01G123800 chr2D 97.518 5278 99 15 1486 6747 73577632 73572371 0.000000e+00 8992.0
3 TraesCS2A01G123800 chr2D 97.284 1583 32 5 6836 8407 73572372 73570790 0.000000e+00 2675.0
4 TraesCS2A01G123800 chr2D 91.525 649 33 7 848 1489 73578326 73577693 0.000000e+00 874.0
5 TraesCS2A01G123800 chr2D 89.681 533 25 12 9091 9602 73569815 73569292 0.000000e+00 652.0
6 TraesCS2A01G123800 chr2D 87.614 549 28 15 67 582 73579182 73578641 1.380000e-167 601.0
7 TraesCS2A01G123800 chr2D 88.889 486 32 14 8458 8938 73570428 73569960 6.470000e-161 579.0
8 TraesCS2A01G123800 chr2D 77.286 700 90 31 5263 5912 353021905 353022585 1.980000e-91 348.0
9 TraesCS2A01G123800 chr2B 96.419 5278 158 24 1486 6747 111461584 111456322 0.000000e+00 8671.0
10 TraesCS2A01G123800 chr2B 94.361 1791 57 10 6836 8605 111456323 111454556 0.000000e+00 2708.0
11 TraesCS2A01G123800 chr2B 88.636 616 49 7 877 1489 111462242 111461645 0.000000e+00 730.0
12 TraesCS2A01G123800 chr2B 87.781 622 33 16 9019 9602 111454317 111453701 0.000000e+00 688.0
13 TraesCS2A01G123800 chr2B 85.137 619 35 25 1 580 111463218 111462618 1.800000e-161 580.0
14 TraesCS2A01G123800 chr2B 92.823 209 8 6 8649 8857 111454560 111454359 7.290000e-76 296.0
15 TraesCS2A01G123800 chr2B 88.764 89 9 1 8932 9020 607246232 607246145 3.670000e-19 108.0
16 TraesCS2A01G123800 chr2B 85.393 89 12 1 8932 9020 274029652 274029565 3.690000e-14 91.6
17 TraesCS2A01G123800 chr2B 94.915 59 2 1 2796 2854 685794824 685794881 3.690000e-14 91.6
18 TraesCS2A01G123800 chr2B 84.043 94 14 1 8927 9020 518332487 518332395 1.330000e-13 89.8
19 TraesCS2A01G123800 chr2B 83.146 89 14 1 8932 9020 23547805 23547892 7.990000e-11 80.5
20 TraesCS2A01G123800 chr2B 83.908 87 11 2 2769 2854 40287192 40287108 7.990000e-11 80.5
21 TraesCS2A01G123800 chr2B 95.556 45 2 0 2729 2773 683097508 683097464 1.340000e-08 73.1
22 TraesCS2A01G123800 chr3A 90.722 97 6 2 6745 6838 493714846 493714942 1.010000e-24 126.0
23 TraesCS2A01G123800 chr1D 91.398 93 6 2 6745 6836 391735752 391735843 1.010000e-24 126.0
24 TraesCS2A01G123800 chr1D 89.130 92 6 1 6746 6837 268535863 268535950 2.830000e-20 111.0
25 TraesCS2A01G123800 chrUn 90.526 95 8 1 6744 6837 255365233 255365139 3.640000e-24 124.0
26 TraesCS2A01G123800 chrUn 90.526 95 8 1 6744 6837 365038388 365038482 3.640000e-24 124.0
27 TraesCS2A01G123800 chrUn 84.270 89 12 2 8932 9020 317869149 317869063 1.720000e-12 86.1
28 TraesCS2A01G123800 chr7D 89.583 96 6 1 6746 6837 613618593 613618688 1.690000e-22 119.0
29 TraesCS2A01G123800 chr7D 87.879 99 7 4 6743 6836 406524879 406524977 2.830000e-20 111.0
30 TraesCS2A01G123800 chr7D 87.640 89 4 7 2768 2853 21085783 21085699 7.940000e-16 97.1
31 TraesCS2A01G123800 chr7D 85.393 89 7 6 2770 2854 264085668 264085582 4.780000e-13 87.9
32 TraesCS2A01G123800 chr6A 89.474 95 9 1 6744 6837 555764699 555764793 1.690000e-22 119.0
33 TraesCS2A01G123800 chr6A 78.519 135 17 9 2729 2854 73459043 73458912 2.880000e-10 78.7
34 TraesCS2A01G123800 chr3B 88.421 95 10 1 6744 6837 756122029 756122123 7.880000e-21 113.0
35 TraesCS2A01G123800 chr3B 87.640 89 10 1 8932 9020 360112163 360112250 1.710000e-17 102.0
36 TraesCS2A01G123800 chr7A 94.286 70 3 1 8934 9003 632521148 632521080 1.320000e-18 106.0
37 TraesCS2A01G123800 chr6D 87.778 90 10 1 8934 9023 84218456 84218368 4.740000e-18 104.0
38 TraesCS2A01G123800 chr4A 85.000 100 7 5 2759 2854 371783880 371783975 2.850000e-15 95.3
39 TraesCS2A01G123800 chr4D 85.227 88 8 2 2769 2854 175107773 175107857 1.720000e-12 86.1
40 TraesCS2A01G123800 chr7B 79.259 135 16 9 2729 2854 245596559 245596428 6.180000e-12 84.2
41 TraesCS2A01G123800 chr7B 84.746 59 4 4 2729 2784 683996896 683996952 5.000000e-03 54.7
42 TraesCS2A01G123800 chr6B 83.908 87 8 6 2765 2848 529345577 529345660 2.880000e-10 78.7
43 TraesCS2A01G123800 chr5B 81.915 94 14 3 8930 9022 42698226 42698135 1.030000e-09 76.8
44 TraesCS2A01G123800 chr1A 77.778 135 18 9 2729 2854 510453218 510453087 1.340000e-08 73.1
45 TraesCS2A01G123800 chr4B 77.037 135 19 9 2729 2854 653941124 653941255 6.220000e-07 67.6
46 TraesCS2A01G123800 chr4B 75.912 137 19 11 2729 2854 483775237 483775370 3.750000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G123800 chr2A 73157315 73166916 9601 True 17732.000000 17732 100.000000 1 9602 1 chr2A.!!$R1 9601
1 TraesCS2A01G123800 chr2D 73569292 73579182 9890 True 2395.500000 8992 92.085167 67 9602 6 chr2D.!!$R1 9535
2 TraesCS2A01G123800 chr2D 353021905 353022585 680 False 348.000000 348 77.286000 5263 5912 1 chr2D.!!$F1 649
3 TraesCS2A01G123800 chr2B 111453701 111463218 9517 True 2278.833333 8671 90.859500 1 9602 6 chr2B.!!$R6 9601

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
774 859 0.036952 CGGATCCTCGAATCCCATGG 60.037 60.000 10.75 4.14 41.98 3.66 F
1017 1177 0.250513 AGATGGCGAAAGTGACCCTC 59.749 55.000 0.00 0.00 0.00 4.30 F
1417 1579 0.390603 CCACATTGGCAGCAACCATG 60.391 55.000 0.00 3.03 40.13 3.66 F
1420 1582 1.001181 ACATTGGCAGCAACCATGAAC 59.999 47.619 0.00 0.00 40.13 3.18 F
1429 1591 1.130561 GCAACCATGAACGAGGCTTAC 59.869 52.381 0.00 0.00 0.00 2.34 F
1532 1765 1.276421 TCTGAAGCTCTTTTCCTCCGG 59.724 52.381 0.00 0.00 0.00 5.14 F
1907 2144 1.571215 GGTAAACGAACCGCCACCAG 61.571 60.000 0.00 0.00 0.00 4.00 F
1908 2145 1.962306 TAAACGAACCGCCACCAGC 60.962 57.895 0.00 0.00 38.52 4.85 F
2618 2857 2.094494 AGGTGATGTCTCGTGCTTGTAG 60.094 50.000 0.00 0.00 0.00 2.74 F
3514 3758 2.363306 TTCCTTGCCAGAAAGCTTGA 57.637 45.000 0.00 0.00 0.00 3.02 F
5519 5783 0.607489 AACATGCTGCCACAGGTCTC 60.607 55.000 0.00 0.00 32.51 3.36 F
5944 6248 2.350522 GGGTACTTGAGTCTGCATGTG 58.649 52.381 0.00 0.00 0.00 3.21 F
6424 6729 2.801077 ATCCCCGTTTTAACCTGGAG 57.199 50.000 0.00 0.00 31.24 3.86 F
8604 9246 0.037605 AAACGGACAAGGCCTAGTCG 60.038 55.000 5.16 10.96 35.63 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2766 3008 1.148273 AAGTCCACGCCACACACAT 59.852 52.632 0.00 0.0 0.00 3.21 R
2798 3042 0.463620 GCAAACCACCAGAGCCAAAA 59.536 50.000 0.00 0.0 0.00 2.44 R
2837 3081 3.547746 TGTTGTACCGAAAAAGGCTTCT 58.452 40.909 0.00 0.0 33.69 2.85 R
2838 3082 3.974871 TGTTGTACCGAAAAAGGCTTC 57.025 42.857 0.00 0.0 33.69 3.86 R
3514 3758 8.813951 GGGAACTAAATAGTAGCATGTACCTAT 58.186 37.037 0.00 0.0 34.99 2.57 R
3649 3893 1.812235 TTAGTCCGACACGCTAGTCA 58.188 50.000 0.40 0.0 38.43 3.41 R
3650 3894 3.417690 AATTAGTCCGACACGCTAGTC 57.582 47.619 0.40 0.0 35.19 2.59 R
4262 4507 5.179045 ACTTTTGCAGTGATGACAGAAAG 57.821 39.130 0.00 0.0 32.83 2.62 R
4800 5047 4.853007 AGCTATGCAGGAAATATGGGATC 58.147 43.478 0.00 0.0 0.00 3.36 R
5838 6142 3.006430 TGATACTCGTGCAGAAAGTTGGA 59.994 43.478 0.00 0.0 0.00 3.53 R
6753 7066 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.0 0.00 4.79 R
6754 7067 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.0 0.00 4.79 R
8622 9264 0.179067 TCTTCGCGGTCCTTTGTTGT 60.179 50.000 6.13 0.0 0.00 3.32 R
9427 10209 5.379187 TGGAAGGGAACAGTTAAACTAACC 58.621 41.667 0.00 0.0 39.47 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.957491 CACACCCACACACAAACAAT 57.043 45.000 0.00 0.00 0.00 2.71
28 29 4.450419 CCACACACAAACAATCTCTCTCTC 59.550 45.833 0.00 0.00 0.00 3.20
29 30 5.295950 CACACACAAACAATCTCTCTCTCT 58.704 41.667 0.00 0.00 0.00 3.10
31 32 5.304101 ACACACAAACAATCTCTCTCTCTCT 59.696 40.000 0.00 0.00 0.00 3.10
33 34 5.774690 ACACAAACAATCTCTCTCTCTCTCT 59.225 40.000 0.00 0.00 0.00 3.10
34 35 6.071952 ACACAAACAATCTCTCTCTCTCTCTC 60.072 42.308 0.00 0.00 0.00 3.20
35 36 5.418840 ACAAACAATCTCTCTCTCTCTCTCC 59.581 44.000 0.00 0.00 0.00 3.71
36 37 4.170468 ACAATCTCTCTCTCTCTCTCCC 57.830 50.000 0.00 0.00 0.00 4.30
37 38 3.141398 CAATCTCTCTCTCTCTCTCCCG 58.859 54.545 0.00 0.00 0.00 5.14
38 39 0.468226 TCTCTCTCTCTCTCTCCCGC 59.532 60.000 0.00 0.00 0.00 6.13
39 40 0.880278 CTCTCTCTCTCTCTCCCGCG 60.880 65.000 0.00 0.00 0.00 6.46
40 41 1.153249 CTCTCTCTCTCTCCCGCGT 60.153 63.158 4.92 0.00 0.00 6.01
41 42 1.436195 CTCTCTCTCTCTCCCGCGTG 61.436 65.000 4.92 0.00 0.00 5.34
42 43 3.119709 CTCTCTCTCTCCCGCGTGC 62.120 68.421 4.92 0.00 0.00 5.34
43 44 3.443925 CTCTCTCTCCCGCGTGCA 61.444 66.667 4.92 0.00 0.00 4.57
44 45 3.408501 CTCTCTCTCCCGCGTGCAG 62.409 68.421 4.92 0.00 0.00 4.41
59 60 4.742201 CAGGTGCAGGTCCGTCCG 62.742 72.222 0.00 0.00 41.99 4.79
62 63 4.980805 GTGCAGGTCCGTCCGCAA 62.981 66.667 12.00 0.47 43.19 4.85
63 64 4.680237 TGCAGGTCCGTCCGCAAG 62.680 66.667 9.45 0.00 40.56 4.01
65 66 2.030562 CAGGTCCGTCCGCAAGTT 59.969 61.111 0.00 0.00 41.99 2.66
101 111 3.815569 GAGAGCGCATCGAGACGGG 62.816 68.421 11.47 2.50 0.00 5.28
351 379 2.980233 GCTCACAGGTGCCGCTTT 60.980 61.111 0.00 0.00 0.00 3.51
387 424 1.031235 TCGTTAACGTCACCCTCACA 58.969 50.000 25.98 1.25 40.80 3.58
463 519 2.309504 CCCCCTCCCTCCTTGTTCC 61.310 68.421 0.00 0.00 0.00 3.62
466 523 2.269241 CTCCCTCCTTGTTCCGCC 59.731 66.667 0.00 0.00 0.00 6.13
476 533 4.467084 GTTCCGCCGCTGATCCCA 62.467 66.667 0.00 0.00 0.00 4.37
482 539 3.958860 CCGCTGATCCCATCCCCC 61.959 72.222 0.00 0.00 0.00 5.40
526 583 2.047655 TGCTCGCCCAAGGTAACG 60.048 61.111 0.00 0.00 46.39 3.18
550 610 0.398381 CTTCCTCCCTCCTCCTCCTG 60.398 65.000 0.00 0.00 0.00 3.86
561 621 1.627834 CCTCCTCCTGCTCTGTTTCTT 59.372 52.381 0.00 0.00 0.00 2.52
566 626 3.217626 CTCCTGCTCTGTTTCTTGGTTT 58.782 45.455 0.00 0.00 0.00 3.27
568 628 2.035066 CCTGCTCTGTTTCTTGGTTTGG 59.965 50.000 0.00 0.00 0.00 3.28
570 630 3.360867 TGCTCTGTTTCTTGGTTTGGAA 58.639 40.909 0.00 0.00 0.00 3.53
572 632 3.243535 GCTCTGTTTCTTGGTTTGGAAGG 60.244 47.826 0.00 0.00 0.00 3.46
573 633 2.693074 TCTGTTTCTTGGTTTGGAAGGC 59.307 45.455 0.00 0.00 0.00 4.35
574 634 2.430332 CTGTTTCTTGGTTTGGAAGGCA 59.570 45.455 0.00 0.00 0.00 4.75
576 636 2.693074 GTTTCTTGGTTTGGAAGGCAGA 59.307 45.455 0.00 0.00 0.00 4.26
577 637 1.981256 TCTTGGTTTGGAAGGCAGAC 58.019 50.000 0.00 0.00 0.00 3.51
578 638 1.214175 TCTTGGTTTGGAAGGCAGACA 59.786 47.619 0.00 0.00 0.00 3.41
580 640 0.843309 TGGTTTGGAAGGCAGACAGA 59.157 50.000 0.00 0.00 0.00 3.41
581 641 1.202806 TGGTTTGGAAGGCAGACAGAG 60.203 52.381 0.00 0.00 0.00 3.35
582 642 1.072331 GGTTTGGAAGGCAGACAGAGA 59.928 52.381 0.00 0.00 0.00 3.10
583 643 2.421619 GTTTGGAAGGCAGACAGAGAG 58.578 52.381 0.00 0.00 0.00 3.20
588 648 3.791586 GGCAGACAGAGAGCCCCC 61.792 72.222 0.00 0.00 42.58 5.40
589 649 4.154347 GCAGACAGAGAGCCCCCG 62.154 72.222 0.00 0.00 0.00 5.73
637 721 1.905922 GCTGCCGTCTGTTTGCTCTC 61.906 60.000 0.00 0.00 0.00 3.20
640 724 1.006102 CCGTCTGTTTGCTCTCGGT 60.006 57.895 0.00 0.00 34.38 4.69
641 725 0.242825 CCGTCTGTTTGCTCTCGGTA 59.757 55.000 0.00 0.00 34.38 4.02
646 730 2.029290 TCTGTTTGCTCTCGGTAACCTC 60.029 50.000 0.00 0.00 0.00 3.85
649 733 0.896940 TTGCTCTCGGTAACCTCGGT 60.897 55.000 0.00 0.00 0.00 4.69
660 744 4.776322 CCTCGGTCATGGCGGCAA 62.776 66.667 18.31 0.00 0.00 4.52
661 745 2.514592 CTCGGTCATGGCGGCAAT 60.515 61.111 18.31 1.34 0.00 3.56
665 749 3.530260 GTCATGGCGGCAATGGGG 61.530 66.667 18.31 3.61 0.00 4.96
684 768 4.717313 GGGGAGGGACGTGCCAAC 62.717 72.222 28.90 20.14 38.95 3.77
695 780 1.906333 GTGCCAACGTGGGGGATTT 60.906 57.895 11.96 0.00 38.19 2.17
696 781 1.605165 TGCCAACGTGGGGGATTTC 60.605 57.895 11.96 0.00 38.19 2.17
697 782 1.304134 GCCAACGTGGGGGATTTCT 60.304 57.895 11.96 0.00 38.19 2.52
698 783 0.898326 GCCAACGTGGGGGATTTCTT 60.898 55.000 11.96 0.00 38.19 2.52
699 784 1.627864 CCAACGTGGGGGATTTCTTT 58.372 50.000 0.00 0.00 32.67 2.52
704 789 3.628008 ACGTGGGGGATTTCTTTATTCC 58.372 45.455 0.00 0.00 0.00 3.01
705 790 2.616842 CGTGGGGGATTTCTTTATTCCG 59.383 50.000 0.00 0.00 0.00 4.30
715 800 2.210116 TCTTTATTCCGCGAATCTGGC 58.790 47.619 8.23 0.00 33.95 4.85
718 803 2.709125 TATTCCGCGAATCTGGCCCG 62.709 60.000 8.23 0.00 33.95 6.13
726 811 1.977293 GAATCTGGCCCGCCTCTCTT 61.977 60.000 7.35 0.00 36.94 2.85
727 812 1.566298 AATCTGGCCCGCCTCTCTTT 61.566 55.000 7.35 0.00 36.94 2.52
728 813 1.566298 ATCTGGCCCGCCTCTCTTTT 61.566 55.000 7.35 0.00 36.94 2.27
730 815 2.820037 GGCCCGCCTCTCTTTTCG 60.820 66.667 0.00 0.00 0.00 3.46
731 816 3.500642 GCCCGCCTCTCTTTTCGC 61.501 66.667 0.00 0.00 0.00 4.70
732 817 3.188786 CCCGCCTCTCTTTTCGCG 61.189 66.667 0.00 0.00 44.08 5.87
733 818 3.854459 CCGCCTCTCTTTTCGCGC 61.854 66.667 0.00 0.00 43.16 6.86
734 819 3.854459 CGCCTCTCTTTTCGCGCC 61.854 66.667 0.00 0.00 37.97 6.53
735 820 3.500642 GCCTCTCTTTTCGCGCCC 61.501 66.667 0.00 0.00 0.00 6.13
737 822 1.671054 CCTCTCTTTTCGCGCCCAA 60.671 57.895 0.00 0.00 0.00 4.12
739 824 1.912371 CTCTCTTTTCGCGCCCAACC 61.912 60.000 0.00 0.00 0.00 3.77
740 825 3.308878 CTCTTTTCGCGCCCAACCG 62.309 63.158 0.00 0.00 0.00 4.44
741 826 4.398598 CTTTTCGCGCCCAACCGG 62.399 66.667 0.00 0.00 0.00 5.28
747 832 4.717629 GCGCCCAACCGGAAAAGC 62.718 66.667 9.46 4.65 0.00 3.51
748 833 4.050934 CGCCCAACCGGAAAAGCC 62.051 66.667 9.46 0.00 0.00 4.35
767 852 1.922570 CGTGTTTCGGATCCTCGAAT 58.077 50.000 10.75 0.00 46.50 3.34
768 853 1.852895 CGTGTTTCGGATCCTCGAATC 59.147 52.381 10.75 8.85 46.50 2.52
769 854 2.202566 GTGTTTCGGATCCTCGAATCC 58.797 52.381 10.75 6.11 46.50 3.01
770 855 1.138266 TGTTTCGGATCCTCGAATCCC 59.862 52.381 10.75 1.99 46.50 3.85
771 856 1.138266 GTTTCGGATCCTCGAATCCCA 59.862 52.381 10.75 0.00 46.50 4.37
773 858 0.969149 TCGGATCCTCGAATCCCATG 59.031 55.000 10.75 0.00 41.98 3.66
774 859 0.036952 CGGATCCTCGAATCCCATGG 60.037 60.000 10.75 4.14 41.98 3.66
775 860 0.326264 GGATCCTCGAATCCCATGGG 59.674 60.000 26.30 26.30 39.53 4.00
792 877 3.370840 TGGGAACAGGAGGAATCAATG 57.629 47.619 0.00 0.00 35.01 2.82
795 880 3.562176 GGGAACAGGAGGAATCAATGTGT 60.562 47.826 0.00 0.00 0.00 3.72
796 881 3.441572 GGAACAGGAGGAATCAATGTGTG 59.558 47.826 0.00 0.00 0.00 3.82
797 882 3.795688 ACAGGAGGAATCAATGTGTGT 57.204 42.857 0.00 0.00 0.00 3.72
798 883 3.415212 ACAGGAGGAATCAATGTGTGTG 58.585 45.455 0.00 0.00 0.00 3.82
799 884 3.181440 ACAGGAGGAATCAATGTGTGTGT 60.181 43.478 0.00 0.00 0.00 3.72
800 885 3.189910 CAGGAGGAATCAATGTGTGTGTG 59.810 47.826 0.00 0.00 0.00 3.82
801 886 2.489329 GGAGGAATCAATGTGTGTGTGG 59.511 50.000 0.00 0.00 0.00 4.17
802 887 2.489329 GAGGAATCAATGTGTGTGTGGG 59.511 50.000 0.00 0.00 0.00 4.61
804 889 2.030007 GGAATCAATGTGTGTGTGGGTG 60.030 50.000 0.00 0.00 0.00 4.61
805 890 1.619654 ATCAATGTGTGTGTGGGTGG 58.380 50.000 0.00 0.00 0.00 4.61
808 893 2.655077 AATGTGTGTGTGGGTGGGGG 62.655 60.000 0.00 0.00 0.00 5.40
833 918 2.671963 GGCGTGTCCCAAGGAACC 60.672 66.667 0.00 0.00 31.38 3.62
834 919 3.047877 GCGTGTCCCAAGGAACCG 61.048 66.667 0.00 0.00 31.38 4.44
836 921 2.430367 GTGTCCCAAGGAACCGCT 59.570 61.111 0.00 0.00 31.38 5.52
839 966 1.299976 GTCCCAAGGAACCGCTCAT 59.700 57.895 0.00 0.00 31.38 2.90
842 969 1.299648 CCAAGGAACCGCTCATCCA 59.700 57.895 0.00 0.00 38.23 3.41
844 971 1.683011 CCAAGGAACCGCTCATCCATT 60.683 52.381 0.00 0.00 38.23 3.16
846 973 1.207791 AGGAACCGCTCATCCATTCT 58.792 50.000 0.00 0.00 38.23 2.40
900 1060 2.547218 GGCGGATTCATCCTTACGCTAA 60.547 50.000 0.00 0.00 44.93 3.09
906 1066 6.422701 CGGATTCATCCTTACGCTAACAAATA 59.577 38.462 4.30 0.00 44.93 1.40
952 1112 1.599667 GCCATTGATGCATTCAGCTCG 60.600 52.381 0.00 0.00 45.94 5.03
953 1113 1.674441 CCATTGATGCATTCAGCTCGT 59.326 47.619 0.00 0.00 45.94 4.18
954 1114 2.874086 CCATTGATGCATTCAGCTCGTA 59.126 45.455 0.00 0.00 45.94 3.43
955 1115 3.313249 CCATTGATGCATTCAGCTCGTAA 59.687 43.478 0.00 0.00 45.94 3.18
956 1116 4.023450 CCATTGATGCATTCAGCTCGTAAT 60.023 41.667 0.00 0.00 45.94 1.89
972 1132 2.536928 CGTAATTAACCTTGCTGCGCTC 60.537 50.000 9.73 0.28 0.00 5.03
973 1133 1.533625 AATTAACCTTGCTGCGCTCA 58.466 45.000 9.73 3.52 0.00 4.26
1017 1177 0.250513 AGATGGCGAAAGTGACCCTC 59.749 55.000 0.00 0.00 0.00 4.30
1155 1315 4.235762 AACGCGCTGGTCTGGTGT 62.236 61.111 5.73 0.00 0.00 4.16
1323 1483 1.215647 CGACTGGTGGCAGGTACTC 59.784 63.158 0.00 0.00 34.60 2.59
1334 1496 4.278419 GTGGCAGGTACTCATTGAAACTTT 59.722 41.667 0.00 0.00 34.60 2.66
1346 1508 7.864379 ACTCATTGAAACTTTCATGTGTTCATC 59.136 33.333 5.03 0.00 39.84 2.92
1351 1513 6.096705 TGAAACTTTCATGTGTTCATCCAACT 59.903 34.615 0.00 0.00 33.53 3.16
1378 1540 5.822519 CCTCTTGCTTGCTGGTGTATATTTA 59.177 40.000 0.00 0.00 0.00 1.40
1417 1579 0.390603 CCACATTGGCAGCAACCATG 60.391 55.000 0.00 3.03 40.13 3.66
1420 1582 1.001181 ACATTGGCAGCAACCATGAAC 59.999 47.619 0.00 0.00 40.13 3.18
1429 1591 1.130561 GCAACCATGAACGAGGCTTAC 59.869 52.381 0.00 0.00 0.00 2.34
1445 1607 4.010349 GGCTTACCAACTTAGCTGAATGT 58.990 43.478 0.00 0.00 35.30 2.71
1461 1624 8.340618 AGCTGAATGTTATGTATCTTTGTTGT 57.659 30.769 0.00 0.00 0.00 3.32
1532 1765 1.276421 TCTGAAGCTCTTTTCCTCCGG 59.724 52.381 0.00 0.00 0.00 5.14
1560 1793 4.597079 GTTCAAGAACGTCATTTTCAGCA 58.403 39.130 0.00 0.00 0.00 4.41
1906 2143 1.597578 GGTAAACGAACCGCCACCA 60.598 57.895 0.00 0.00 0.00 4.17
1907 2144 1.571215 GGTAAACGAACCGCCACCAG 61.571 60.000 0.00 0.00 0.00 4.00
1908 2145 1.962306 TAAACGAACCGCCACCAGC 60.962 57.895 0.00 0.00 38.52 4.85
1909 2146 2.386064 TAAACGAACCGCCACCAGCT 62.386 55.000 0.00 0.00 40.39 4.24
1910 2147 4.681978 ACGAACCGCCACCAGCTC 62.682 66.667 0.00 0.00 40.39 4.09
1912 2149 4.681978 GAACCGCCACCAGCTCGT 62.682 66.667 0.00 0.00 40.39 4.18
2122 2360 6.389091 TGCTATGAACATTAGTTTTTGCAGG 58.611 36.000 0.00 0.00 38.30 4.85
2282 2521 4.672409 GCCACAATAATAAACAGCCACTC 58.328 43.478 0.00 0.00 0.00 3.51
2411 2650 4.536489 ACAAAAATAGGGTCTAGGACTGCT 59.464 41.667 0.00 0.00 32.47 4.24
2618 2857 2.094494 AGGTGATGTCTCGTGCTTGTAG 60.094 50.000 0.00 0.00 0.00 2.74
2766 3008 4.708421 AGCAGAACCTTATCGTACTTGGTA 59.292 41.667 0.00 0.00 0.00 3.25
2798 3042 3.375922 CGTGGACTTGTTTGTTACCTTGT 59.624 43.478 0.00 0.00 0.00 3.16
2831 3075 9.914834 TCTGGTGGTTTGCTTTATATATAAAGT 57.085 29.630 31.63 0.00 46.78 2.66
2837 3081 7.014808 GGTTTGCTTTATATATAAAGTGGGGCA 59.985 37.037 31.63 24.93 46.78 5.36
2838 3082 7.759489 TTGCTTTATATATAAAGTGGGGCAG 57.241 36.000 31.63 15.51 46.78 4.85
3514 3758 2.363306 TTCCTTGCCAGAAAGCTTGA 57.637 45.000 0.00 0.00 0.00 3.02
4282 4527 6.691754 TTACTTTCTGTCATCACTGCAAAA 57.308 33.333 0.00 0.00 0.00 2.44
4288 4533 6.882610 TCTGTCATCACTGCAAAAGTAAAT 57.117 33.333 0.00 0.00 36.83 1.40
4289 4534 6.671190 TCTGTCATCACTGCAAAAGTAAATG 58.329 36.000 0.00 0.00 36.83 2.32
4295 4540 6.060028 TCACTGCAAAAGTAAATGTCTGAC 57.940 37.500 0.00 0.00 36.83 3.51
4665 4912 7.538575 ACTACATTTGATTGCTTTCATACCAC 58.461 34.615 0.00 0.00 0.00 4.16
4726 4973 3.623510 GCTTTCTTCGGGATTTCTTCGAT 59.376 43.478 0.00 0.00 32.80 3.59
4836 5084 7.290061 TCCTGCATAGCTTCCTAATAACATTT 58.710 34.615 0.00 0.00 0.00 2.32
4837 5085 7.779798 TCCTGCATAGCTTCCTAATAACATTTT 59.220 33.333 0.00 0.00 0.00 1.82
4838 5086 9.066892 CCTGCATAGCTTCCTAATAACATTTTA 57.933 33.333 0.00 0.00 0.00 1.52
5519 5783 0.607489 AACATGCTGCCACAGGTCTC 60.607 55.000 0.00 0.00 32.51 3.36
5598 5862 7.483580 TTAAAAGAAACAAAAGGGACCAGAA 57.516 32.000 0.00 0.00 0.00 3.02
5838 6142 3.554934 TCTCTTTGGACAGTTGTTGCAT 58.445 40.909 0.00 0.00 0.00 3.96
5926 6230 7.014230 CCTTTTATAACAGTTGGACATATGGGG 59.986 40.741 7.80 0.00 0.00 4.96
5944 6248 2.350522 GGGTACTTGAGTCTGCATGTG 58.649 52.381 0.00 0.00 0.00 3.21
6024 6328 7.893124 ATTTCTCAATCTAAGGCATGTGAAT 57.107 32.000 0.00 0.00 0.00 2.57
6029 6333 9.241919 TCTCAATCTAAGGCATGTGAATTTTTA 57.758 29.630 0.00 0.00 0.00 1.52
6030 6334 9.859427 CTCAATCTAAGGCATGTGAATTTTTAA 57.141 29.630 0.00 0.00 0.00 1.52
6424 6729 2.801077 ATCCCCGTTTTAACCTGGAG 57.199 50.000 0.00 0.00 31.24 3.86
6465 6770 8.196378 AGGGACTTAGATGAACATAGGTAATC 57.804 38.462 0.00 0.00 27.25 1.75
6538 6844 9.109393 TCAGGCTTGTTGATATTGATTAAGTAC 57.891 33.333 0.00 0.00 0.00 2.73
6590 6896 5.569059 GCATTGTGATGTTGTACTTAGTTGC 59.431 40.000 0.00 0.00 35.63 4.17
6591 6897 4.983215 TGTGATGTTGTACTTAGTTGCG 57.017 40.909 0.00 0.00 0.00 4.85
6634 6947 7.792032 ACTGCTATAACCTCTTAGTTGCATAA 58.208 34.615 0.00 0.00 0.00 1.90
6664 6977 7.779326 TGGTTCATATTATGCATTTCCTCAAGA 59.221 33.333 3.54 0.00 0.00 3.02
6745 7058 6.923508 GCAACCAACTTTAGTTTCTTGCTTAT 59.076 34.615 18.28 0.00 40.84 1.73
6746 7059 8.079809 GCAACCAACTTTAGTTTCTTGCTTATA 58.920 33.333 18.28 0.00 40.84 0.98
6747 7060 9.394477 CAACCAACTTTAGTTTCTTGCTTATAC 57.606 33.333 0.00 0.00 35.83 1.47
6748 7061 8.919777 ACCAACTTTAGTTTCTTGCTTATACT 57.080 30.769 0.00 0.00 35.83 2.12
6749 7062 9.000486 ACCAACTTTAGTTTCTTGCTTATACTC 58.000 33.333 0.00 0.00 35.83 2.59
6750 7063 8.451748 CCAACTTTAGTTTCTTGCTTATACTCC 58.548 37.037 0.00 0.00 35.83 3.85
6751 7064 8.451748 CAACTTTAGTTTCTTGCTTATACTCCC 58.548 37.037 0.00 0.00 35.83 4.30
6752 7065 7.919151 ACTTTAGTTTCTTGCTTATACTCCCT 58.081 34.615 0.00 0.00 0.00 4.20
6753 7066 8.041919 ACTTTAGTTTCTTGCTTATACTCCCTC 58.958 37.037 0.00 0.00 0.00 4.30
6754 7067 5.360649 AGTTTCTTGCTTATACTCCCTCC 57.639 43.478 0.00 0.00 0.00 4.30
6755 7068 4.120589 GTTTCTTGCTTATACTCCCTCCG 58.879 47.826 0.00 0.00 0.00 4.63
6756 7069 3.028094 TCTTGCTTATACTCCCTCCGT 57.972 47.619 0.00 0.00 0.00 4.69
6757 7070 2.957006 TCTTGCTTATACTCCCTCCGTC 59.043 50.000 0.00 0.00 0.00 4.79
6758 7071 1.700955 TGCTTATACTCCCTCCGTCC 58.299 55.000 0.00 0.00 0.00 4.79
6759 7072 0.597072 GCTTATACTCCCTCCGTCCG 59.403 60.000 0.00 0.00 0.00 4.79
6760 7073 1.816961 GCTTATACTCCCTCCGTCCGA 60.817 57.143 0.00 0.00 0.00 4.55
6761 7074 2.579873 CTTATACTCCCTCCGTCCGAA 58.420 52.381 0.00 0.00 0.00 4.30
6762 7075 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
6763 7076 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
6764 7077 1.631405 TACTCCCTCCGTCCGAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
6765 7078 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
6766 7079 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
6767 7080 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
6768 7081 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
6769 7082 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
6770 7083 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
6771 7084 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
6772 7085 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
6773 7086 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
6774 7087 1.314730 GTCCGAAAAAGCTTGTCCCA 58.685 50.000 0.00 0.00 0.00 4.37
6775 7088 1.679153 GTCCGAAAAAGCTTGTCCCAA 59.321 47.619 0.00 0.00 0.00 4.12
6776 7089 1.953686 TCCGAAAAAGCTTGTCCCAAG 59.046 47.619 0.00 0.00 0.00 3.61
6777 7090 1.602920 CCGAAAAAGCTTGTCCCAAGC 60.603 52.381 18.69 18.69 43.31 4.01
6782 7095 2.653115 GCTTGTCCCAAGCTTGCC 59.347 61.111 21.43 11.01 40.01 4.52
6783 7096 2.935740 GCTTGTCCCAAGCTTGCCC 61.936 63.158 21.43 10.66 40.01 5.36
6784 7097 2.203625 TTGTCCCAAGCTTGCCCC 60.204 61.111 21.43 10.31 0.00 5.80
6785 7098 2.720144 CTTGTCCCAAGCTTGCCCCT 62.720 60.000 21.43 0.00 0.00 4.79
6786 7099 2.677875 GTCCCAAGCTTGCCCCTG 60.678 66.667 21.43 6.80 0.00 4.45
6787 7100 3.983420 TCCCAAGCTTGCCCCTGG 61.983 66.667 21.43 15.78 0.00 4.45
6788 7101 4.305956 CCCAAGCTTGCCCCTGGT 62.306 66.667 21.43 0.00 0.00 4.00
6789 7102 2.993264 CCAAGCTTGCCCCTGGTG 60.993 66.667 21.43 0.62 0.00 4.17
6790 7103 3.688159 CAAGCTTGCCCCTGGTGC 61.688 66.667 14.65 0.00 0.00 5.01
6791 7104 3.907130 AAGCTTGCCCCTGGTGCT 61.907 61.111 0.00 0.00 35.30 4.40
6792 7105 2.538141 AAGCTTGCCCCTGGTGCTA 61.538 57.895 0.00 0.00 33.28 3.49
6793 7106 2.439156 GCTTGCCCCTGGTGCTAG 60.439 66.667 8.12 8.12 35.17 3.42
6794 7107 2.971598 GCTTGCCCCTGGTGCTAGA 61.972 63.158 15.72 0.00 34.16 2.43
6795 7108 1.918253 CTTGCCCCTGGTGCTAGAT 59.082 57.895 6.77 0.00 34.16 1.98
6796 7109 1.131638 CTTGCCCCTGGTGCTAGATA 58.868 55.000 6.77 0.00 34.16 1.98
6797 7110 0.837272 TTGCCCCTGGTGCTAGATAC 59.163 55.000 2.15 0.00 0.00 2.24
6798 7111 0.326143 TGCCCCTGGTGCTAGATACA 60.326 55.000 2.15 0.00 0.00 2.29
6799 7112 1.059913 GCCCCTGGTGCTAGATACAT 58.940 55.000 0.00 0.00 0.00 2.29
6800 7113 1.002544 GCCCCTGGTGCTAGATACATC 59.997 57.143 0.00 0.00 0.00 3.06
6801 7114 1.625818 CCCCTGGTGCTAGATACATCC 59.374 57.143 0.00 0.00 0.00 3.51
6802 7115 2.329267 CCCTGGTGCTAGATACATCCA 58.671 52.381 0.00 0.00 0.00 3.41
6803 7116 2.909006 CCCTGGTGCTAGATACATCCAT 59.091 50.000 0.00 0.00 0.00 3.41
6804 7117 3.328931 CCCTGGTGCTAGATACATCCATT 59.671 47.826 0.00 0.00 0.00 3.16
6805 7118 4.202503 CCCTGGTGCTAGATACATCCATTT 60.203 45.833 0.00 0.00 0.00 2.32
6806 7119 4.758674 CCTGGTGCTAGATACATCCATTTG 59.241 45.833 0.00 0.00 0.00 2.32
6807 7120 5.455183 CCTGGTGCTAGATACATCCATTTGA 60.455 44.000 0.00 0.00 0.00 2.69
6808 7121 5.614308 TGGTGCTAGATACATCCATTTGAG 58.386 41.667 0.00 0.00 0.00 3.02
6809 7122 4.999950 GGTGCTAGATACATCCATTTGAGG 59.000 45.833 0.00 0.00 0.00 3.86
6810 7123 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
6811 7124 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
6812 7125 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
6813 7126 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
6814 7127 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
6815 7128 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
6816 7129 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
6817 7130 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
6818 7131 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
6819 7132 3.243359 TCCATTTGAGGGACAAGCTTT 57.757 42.857 0.00 0.00 39.77 3.51
6820 7133 3.575805 TCCATTTGAGGGACAAGCTTTT 58.424 40.909 0.00 0.00 39.77 2.27
6821 7134 3.966665 TCCATTTGAGGGACAAGCTTTTT 59.033 39.130 0.00 0.00 39.77 1.94
6822 7135 4.039124 TCCATTTGAGGGACAAGCTTTTTC 59.961 41.667 0.00 0.00 39.77 2.29
6823 7136 3.708563 TTTGAGGGACAAGCTTTTTCG 57.291 42.857 0.00 0.00 39.77 3.46
6824 7137 1.604604 TGAGGGACAAGCTTTTTCGG 58.395 50.000 0.00 0.00 0.00 4.30
6825 7138 1.142060 TGAGGGACAAGCTTTTTCGGA 59.858 47.619 0.00 0.00 0.00 4.55
6826 7139 1.535896 GAGGGACAAGCTTTTTCGGAC 59.464 52.381 0.00 0.00 0.00 4.79
6827 7140 1.133915 AGGGACAAGCTTTTTCGGACA 60.134 47.619 0.00 0.00 0.00 4.02
6828 7141 1.679153 GGGACAAGCTTTTTCGGACAA 59.321 47.619 0.00 0.00 0.00 3.18
6829 7142 2.100087 GGGACAAGCTTTTTCGGACAAA 59.900 45.455 0.00 0.00 0.00 2.83
6830 7143 3.372060 GGACAAGCTTTTTCGGACAAAG 58.628 45.455 11.36 11.36 34.80 2.77
6831 7144 3.372060 GACAAGCTTTTTCGGACAAAGG 58.628 45.455 16.06 4.83 32.66 3.11
6832 7145 2.100749 ACAAGCTTTTTCGGACAAAGGG 59.899 45.455 16.06 0.00 32.66 3.95
6833 7146 2.358322 AGCTTTTTCGGACAAAGGGA 57.642 45.000 16.06 0.00 32.66 4.20
6834 7147 2.230660 AGCTTTTTCGGACAAAGGGAG 58.769 47.619 16.06 0.00 32.66 4.30
6844 7157 3.019564 GGACAAAGGGAGTAGTACGCTA 58.980 50.000 3.96 0.00 0.00 4.26
6878 7191 7.865706 ACATTATGTCCTAACCAAATCTGTC 57.134 36.000 0.00 0.00 0.00 3.51
7280 7593 1.934589 TGACGGTGTGTTTCACTCTG 58.065 50.000 8.56 8.56 45.50 3.35
7552 7875 1.274167 CGTTGCACCCCAGAAGTAGTA 59.726 52.381 0.00 0.00 0.00 1.82
7715 8038 5.064198 CAGCATTGACAGCCAATAAATTTGG 59.936 40.000 0.00 0.00 43.27 3.28
7747 8070 9.487790 TTGGATTGGATTTGTCTCAAAATTTAC 57.512 29.630 0.00 0.00 29.89 2.01
7977 8306 2.669569 GCAAGACCAGCAGCGGAA 60.670 61.111 9.87 0.00 0.00 4.30
8108 8437 8.411683 CAATATACTCCTACTACCTGTTTCGTT 58.588 37.037 0.00 0.00 0.00 3.85
8114 8443 5.870978 TCCTACTACCTGTTTCGTTATTTGC 59.129 40.000 0.00 0.00 0.00 3.68
8284 8615 0.807496 GCTGTCCCATCAACTTCAGC 59.193 55.000 0.00 0.00 40.66 4.26
8285 8616 1.612726 GCTGTCCCATCAACTTCAGCT 60.613 52.381 7.56 0.00 42.98 4.24
8388 8719 1.377725 CCTTTGGAGCCTCGCATGT 60.378 57.895 0.00 0.00 0.00 3.21
8428 8762 4.024641 GTGTATATTTAACCCCGGAAAGCG 60.025 45.833 0.73 0.00 0.00 4.68
8438 8772 2.096980 CCCCGGAAAGCGTATCTTTTTC 59.903 50.000 0.73 0.00 44.58 2.29
8460 9102 2.357154 CCCCCACCTTGGATCTAACTTG 60.357 54.545 0.00 0.00 40.96 3.16
8463 9105 4.407365 CCCACCTTGGATCTAACTTGTTT 58.593 43.478 0.00 0.00 40.96 2.83
8583 9225 0.681243 GGAGGTCATTCCCTGGCAAC 60.681 60.000 0.00 0.00 34.03 4.17
8600 9242 1.950909 CAACAAAACGGACAAGGCCTA 59.049 47.619 5.16 0.00 0.00 3.93
8601 9243 1.892209 ACAAAACGGACAAGGCCTAG 58.108 50.000 5.16 0.00 0.00 3.02
8602 9244 1.142262 ACAAAACGGACAAGGCCTAGT 59.858 47.619 5.16 0.00 0.00 2.57
8603 9245 1.804748 CAAAACGGACAAGGCCTAGTC 59.195 52.381 5.16 1.42 0.00 2.59
8604 9246 0.037605 AAACGGACAAGGCCTAGTCG 60.038 55.000 5.16 10.96 35.63 4.18
8605 9247 0.896940 AACGGACAAGGCCTAGTCGA 60.897 55.000 5.16 0.00 35.63 4.20
8606 9248 1.139095 CGGACAAGGCCTAGTCGAC 59.861 63.158 5.16 7.70 35.63 4.20
8607 9249 1.516423 GGACAAGGCCTAGTCGACC 59.484 63.158 13.01 1.05 35.63 4.79
8608 9250 1.139095 GACAAGGCCTAGTCGACCG 59.861 63.158 13.01 3.50 0.00 4.79
8609 9251 2.280823 GACAAGGCCTAGTCGACCGG 62.281 65.000 13.01 14.34 0.00 5.28
8610 9252 3.459063 AAGGCCTAGTCGACCGGC 61.459 66.667 28.89 28.89 43.03 6.13
8611 9253 4.753662 AGGCCTAGTCGACCGGCA 62.754 66.667 33.92 11.44 45.53 5.69
8612 9254 3.766691 GGCCTAGTCGACCGGCAA 61.767 66.667 33.92 9.59 45.53 4.52
8613 9255 2.263540 GCCTAGTCGACCGGCAAA 59.736 61.111 30.69 5.20 43.25 3.68
8614 9256 1.153429 GCCTAGTCGACCGGCAAAT 60.153 57.895 30.69 8.72 43.25 2.32
8615 9257 0.743345 GCCTAGTCGACCGGCAAATT 60.743 55.000 30.69 8.04 43.25 1.82
8616 9258 1.006832 CCTAGTCGACCGGCAAATTG 58.993 55.000 13.01 0.00 0.00 2.32
8617 9259 1.674817 CCTAGTCGACCGGCAAATTGT 60.675 52.381 13.01 0.00 0.00 2.71
8618 9260 2.417651 CCTAGTCGACCGGCAAATTGTA 60.418 50.000 13.01 0.00 0.00 2.41
8619 9261 1.722011 AGTCGACCGGCAAATTGTAG 58.278 50.000 13.01 0.00 0.00 2.74
8620 9262 0.725117 GTCGACCGGCAAATTGTAGG 59.275 55.000 3.51 7.18 0.00 3.18
8621 9263 0.609151 TCGACCGGCAAATTGTAGGA 59.391 50.000 0.00 0.00 0.00 2.94
8622 9264 1.002201 TCGACCGGCAAATTGTAGGAA 59.998 47.619 0.00 0.00 0.00 3.36
8623 9265 1.129811 CGACCGGCAAATTGTAGGAAC 59.870 52.381 0.00 7.76 0.00 3.62
8624 9266 2.156098 GACCGGCAAATTGTAGGAACA 58.844 47.619 0.00 0.00 0.00 3.18
8635 9277 2.841215 TGTAGGAACAACAAAGGACCG 58.159 47.619 0.00 0.00 30.91 4.79
8636 9278 1.534163 GTAGGAACAACAAAGGACCGC 59.466 52.381 0.00 0.00 0.00 5.68
8637 9279 1.164041 AGGAACAACAAAGGACCGCG 61.164 55.000 0.00 0.00 0.00 6.46
8638 9280 1.161563 GGAACAACAAAGGACCGCGA 61.162 55.000 8.23 0.00 0.00 5.87
8639 9281 0.658897 GAACAACAAAGGACCGCGAA 59.341 50.000 8.23 0.00 0.00 4.70
8640 9282 0.661020 AACAACAAAGGACCGCGAAG 59.339 50.000 8.23 0.00 0.00 3.79
8641 9283 0.179067 ACAACAAAGGACCGCGAAGA 60.179 50.000 8.23 0.00 0.00 2.87
8642 9284 0.941542 CAACAAAGGACCGCGAAGAA 59.058 50.000 8.23 0.00 0.00 2.52
8643 9285 0.942252 AACAAAGGACCGCGAAGAAC 59.058 50.000 8.23 0.00 0.00 3.01
8644 9286 1.219522 ACAAAGGACCGCGAAGAACG 61.220 55.000 8.23 0.00 45.66 3.95
8720 9414 1.149627 TGTATTACCGCCATGCCCC 59.850 57.895 0.00 0.00 0.00 5.80
8721 9415 1.964373 GTATTACCGCCATGCCCCG 60.964 63.158 0.00 0.00 0.00 5.73
8723 9417 1.985460 TATTACCGCCATGCCCCGTT 61.985 55.000 0.00 0.00 0.00 4.44
8724 9418 4.787286 TACCGCCATGCCCCGTTG 62.787 66.667 0.00 0.00 0.00 4.10
8730 9424 1.524621 CCATGCCCCGTTGAGCTAG 60.525 63.158 0.00 0.00 0.00 3.42
8731 9425 2.182842 CATGCCCCGTTGAGCTAGC 61.183 63.158 6.62 6.62 0.00 3.42
8733 9427 2.512515 GCCCCGTTGAGCTAGCTG 60.513 66.667 24.99 7.47 0.00 4.24
8734 9428 3.019003 GCCCCGTTGAGCTAGCTGA 62.019 63.158 24.99 12.04 0.00 4.26
8735 9429 1.826024 CCCCGTTGAGCTAGCTGAT 59.174 57.895 24.99 0.00 0.00 2.90
8736 9430 0.531532 CCCCGTTGAGCTAGCTGATG 60.532 60.000 24.99 15.20 0.00 3.07
8744 9438 2.995939 TGAGCTAGCTGATGTTGTTTCG 59.004 45.455 24.99 0.00 0.00 3.46
8752 9446 3.849911 CTGATGTTGTTTCGGCTAGAGA 58.150 45.455 0.00 0.00 0.00 3.10
8787 9481 4.275936 CCCGCTCATAATTCCTTTTTCGAT 59.724 41.667 0.00 0.00 0.00 3.59
8872 9566 4.356442 CCTGCGCCCCGGTTTTTG 62.356 66.667 4.18 0.00 0.00 2.44
8880 9574 1.277440 CCCGGTTTTTGTGTCGTCG 59.723 57.895 0.00 0.00 0.00 5.12
8887 9581 3.493503 GGTTTTTGTGTCGTCGAGATCTT 59.506 43.478 0.00 0.00 0.00 2.40
8889 9583 3.917329 TTTGTGTCGTCGAGATCTTCT 57.083 42.857 0.00 0.00 0.00 2.85
8890 9584 3.473093 TTGTGTCGTCGAGATCTTCTC 57.527 47.619 0.00 0.00 40.06 2.87
8891 9585 1.738350 TGTGTCGTCGAGATCTTCTCC 59.262 52.381 0.00 0.00 40.34 3.71
8909 9603 3.423154 CGCCGTCTTGCCTTCACC 61.423 66.667 0.00 0.00 0.00 4.02
8917 9611 3.314080 CGTCTTGCCTTCACCTGTTTTTA 59.686 43.478 0.00 0.00 0.00 1.52
8919 9613 5.222631 GTCTTGCCTTCACCTGTTTTTATG 58.777 41.667 0.00 0.00 0.00 1.90
8936 9630 7.429920 TGTTTTTATGTTCTGCGTGTTTTCTAC 59.570 33.333 0.00 0.00 0.00 2.59
8937 9631 6.854496 TTTATGTTCTGCGTGTTTTCTACT 57.146 33.333 0.00 0.00 0.00 2.57
8938 9632 4.992381 ATGTTCTGCGTGTTTTCTACTC 57.008 40.909 0.00 0.00 0.00 2.59
8939 9633 3.128349 TGTTCTGCGTGTTTTCTACTCC 58.872 45.455 0.00 0.00 0.00 3.85
8940 9634 2.450609 TCTGCGTGTTTTCTACTCCC 57.549 50.000 0.00 0.00 0.00 4.30
8941 9635 1.968493 TCTGCGTGTTTTCTACTCCCT 59.032 47.619 0.00 0.00 0.00 4.20
8942 9636 2.029290 TCTGCGTGTTTTCTACTCCCTC 60.029 50.000 0.00 0.00 0.00 4.30
8943 9637 1.001633 TGCGTGTTTTCTACTCCCTCC 59.998 52.381 0.00 0.00 0.00 4.30
8944 9638 1.992170 CGTGTTTTCTACTCCCTCCG 58.008 55.000 0.00 0.00 0.00 4.63
8945 9639 1.271656 CGTGTTTTCTACTCCCTCCGT 59.728 52.381 0.00 0.00 0.00 4.69
8946 9640 2.670509 CGTGTTTTCTACTCCCTCCGTC 60.671 54.545 0.00 0.00 0.00 4.79
8947 9641 2.561858 GTGTTTTCTACTCCCTCCGTCT 59.438 50.000 0.00 0.00 0.00 4.18
8948 9642 2.824341 TGTTTTCTACTCCCTCCGTCTC 59.176 50.000 0.00 0.00 0.00 3.36
8949 9643 2.824341 GTTTTCTACTCCCTCCGTCTCA 59.176 50.000 0.00 0.00 0.00 3.27
8950 9644 3.383698 TTTCTACTCCCTCCGTCTCAT 57.616 47.619 0.00 0.00 0.00 2.90
8951 9645 4.515028 TTTCTACTCCCTCCGTCTCATA 57.485 45.455 0.00 0.00 0.00 2.15
8952 9646 4.515028 TTCTACTCCCTCCGTCTCATAA 57.485 45.455 0.00 0.00 0.00 1.90
8953 9647 4.726035 TCTACTCCCTCCGTCTCATAAT 57.274 45.455 0.00 0.00 0.00 1.28
8954 9648 4.399219 TCTACTCCCTCCGTCTCATAATG 58.601 47.826 0.00 0.00 0.00 1.90
8955 9649 3.033659 ACTCCCTCCGTCTCATAATGT 57.966 47.619 0.00 0.00 0.00 2.71
8956 9650 4.180377 ACTCCCTCCGTCTCATAATGTA 57.820 45.455 0.00 0.00 0.00 2.29
8957 9651 4.543689 ACTCCCTCCGTCTCATAATGTAA 58.456 43.478 0.00 0.00 0.00 2.41
8958 9652 4.585162 ACTCCCTCCGTCTCATAATGTAAG 59.415 45.833 0.00 0.00 0.00 2.34
8959 9653 3.321111 TCCCTCCGTCTCATAATGTAAGC 59.679 47.826 0.00 0.00 0.00 3.09
8960 9654 3.555168 CCCTCCGTCTCATAATGTAAGCC 60.555 52.174 0.00 0.00 0.00 4.35
8961 9655 3.309388 CTCCGTCTCATAATGTAAGCCG 58.691 50.000 0.00 0.00 0.00 5.52
8962 9656 2.691526 TCCGTCTCATAATGTAAGCCGT 59.308 45.455 0.00 0.00 0.00 5.68
8963 9657 3.131577 TCCGTCTCATAATGTAAGCCGTT 59.868 43.478 0.00 0.00 0.00 4.44
8964 9658 3.869246 CCGTCTCATAATGTAAGCCGTTT 59.131 43.478 0.00 0.00 0.00 3.60
8965 9659 4.331717 CCGTCTCATAATGTAAGCCGTTTT 59.668 41.667 0.00 0.00 0.00 2.43
8966 9660 5.163794 CCGTCTCATAATGTAAGCCGTTTTT 60.164 40.000 0.00 0.00 0.00 1.94
9011 9705 6.721571 AAAACGTCCTACATTGTGTGATAG 57.278 37.500 0.00 0.00 0.00 2.08
9012 9706 5.654603 AACGTCCTACATTGTGTGATAGA 57.345 39.130 0.00 0.00 0.00 1.98
9013 9707 5.250235 ACGTCCTACATTGTGTGATAGAG 57.750 43.478 0.00 0.00 0.00 2.43
9014 9708 4.098044 ACGTCCTACATTGTGTGATAGAGG 59.902 45.833 0.00 0.00 0.00 3.69
9015 9709 4.499865 CGTCCTACATTGTGTGATAGAGGG 60.500 50.000 0.00 0.00 0.00 4.30
9016 9710 4.649674 GTCCTACATTGTGTGATAGAGGGA 59.350 45.833 0.00 0.00 0.00 4.20
9017 9711 4.895889 TCCTACATTGTGTGATAGAGGGAG 59.104 45.833 0.00 0.00 0.00 4.30
9018 9712 4.651503 CCTACATTGTGTGATAGAGGGAGT 59.348 45.833 0.00 0.00 0.00 3.85
9019 9713 5.833667 CCTACATTGTGTGATAGAGGGAGTA 59.166 44.000 0.00 0.00 0.00 2.59
9095 9869 4.743644 GCATATTTTCATCTGCTCTTTGCC 59.256 41.667 0.00 0.00 42.00 4.52
9114 9888 2.227626 GCCCTCTGAGAAAGCTGTTTTC 59.772 50.000 6.17 8.70 44.52 2.29
9146 9926 7.915293 TTTATAATCTTGATGTGAACCGTGT 57.085 32.000 0.00 0.00 0.00 4.49
9184 9964 0.815615 GGGTTCTGGCTAAGATGCGG 60.816 60.000 0.00 0.00 33.93 5.69
9250 10030 2.629137 ACCTTGTTGCTTTGCATCATGA 59.371 40.909 0.00 0.00 37.94 3.07
9252 10032 3.553302 CCTTGTTGCTTTGCATCATGACA 60.553 43.478 0.00 0.00 37.94 3.58
9255 10036 1.618487 TGCTTTGCATCATGACACCA 58.382 45.000 0.00 0.00 31.71 4.17
9324 10105 2.093658 AGTTAGGTTGTACCAGATGCCG 60.094 50.000 0.00 0.00 41.95 5.69
9333 10114 2.251409 ACCAGATGCCGATTCATCAG 57.749 50.000 12.46 6.44 43.94 2.90
9374 10155 1.877443 GTCGCTGGCTTTTTGAAGGTA 59.123 47.619 0.00 0.00 0.00 3.08
9452 10234 6.072119 GGTTAGTTTAACTGTTCCCTTCCATG 60.072 42.308 8.00 0.00 38.68 3.66
9512 10296 2.813726 TTGGTAGCACGGTGGCACT 61.814 57.895 18.45 0.00 35.83 4.40
9554 10367 0.036732 TTGTGGACAGGTGCCATCTC 59.963 55.000 0.00 0.00 37.81 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.480470 AGAGAGATTGTTTGTGTGTGGG 58.520 45.455 0.00 0.00 0.00 4.61
16 17 3.141398 CGGGAGAGAGAGAGAGAGATTG 58.859 54.545 0.00 0.00 0.00 2.67
19 20 0.468226 GCGGGAGAGAGAGAGAGAGA 59.532 60.000 0.00 0.00 0.00 3.10
28 29 4.504916 CCTGCACGCGGGAGAGAG 62.505 72.222 15.48 0.54 45.10 3.20
42 43 4.742201 CGGACGGACCTGCACCTG 62.742 72.222 0.00 0.00 36.31 4.00
82 92 2.352915 CGTCTCGATGCGCTCTCC 60.353 66.667 9.73 0.00 0.00 3.71
101 111 3.451004 TTGTCCATGCCATGCCGC 61.451 61.111 0.00 0.00 0.00 6.53
163 180 3.721706 GTGGCTGGGGAGGAGGTG 61.722 72.222 0.00 0.00 0.00 4.00
387 424 0.842635 GCCAAGAGATGATGAGGGGT 59.157 55.000 0.00 0.00 0.00 4.95
447 503 2.990479 CGGAACAAGGAGGGAGGG 59.010 66.667 0.00 0.00 0.00 4.30
463 519 4.996434 GGGATGGGATCAGCGGCG 62.996 72.222 0.51 0.51 0.00 6.46
466 523 2.851102 AGGGGGATGGGATCAGCG 60.851 66.667 0.00 0.00 0.00 5.18
468 525 2.219875 CGGAGGGGGATGGGATCAG 61.220 68.421 0.00 0.00 0.00 2.90
550 610 3.243535 CCTTCCAAACCAAGAAACAGAGC 60.244 47.826 0.00 0.00 0.00 4.09
561 621 0.843309 TCTGTCTGCCTTCCAAACCA 59.157 50.000 0.00 0.00 0.00 3.67
566 626 1.548357 GGCTCTCTGTCTGCCTTCCA 61.548 60.000 0.00 0.00 43.05 3.53
568 628 1.220477 GGGCTCTCTGTCTGCCTTC 59.780 63.158 0.00 0.00 45.45 3.46
570 630 2.686835 GGGGCTCTCTGTCTGCCT 60.687 66.667 0.00 0.00 45.45 4.75
572 632 4.154347 CGGGGGCTCTCTGTCTGC 62.154 72.222 0.00 0.00 0.00 4.26
573 633 3.465403 CCGGGGGCTCTCTGTCTG 61.465 72.222 0.00 0.00 0.00 3.51
615 675 4.389576 CAAACAGACGGCAGCGGC 62.390 66.667 0.00 0.00 40.13 6.53
617 677 3.300667 GAGCAAACAGACGGCAGCG 62.301 63.158 0.00 0.00 0.00 5.18
618 678 1.905922 GAGAGCAAACAGACGGCAGC 61.906 60.000 0.00 0.00 0.00 5.25
621 681 2.383527 CCGAGAGCAAACAGACGGC 61.384 63.158 0.00 0.00 34.36 5.68
623 683 1.719780 GTTACCGAGAGCAAACAGACG 59.280 52.381 0.00 0.00 0.00 4.18
625 685 1.968493 AGGTTACCGAGAGCAAACAGA 59.032 47.619 0.00 0.00 0.00 3.41
629 713 0.245539 CCGAGGTTACCGAGAGCAAA 59.754 55.000 0.00 0.00 0.00 3.68
631 715 1.303888 ACCGAGGTTACCGAGAGCA 60.304 57.895 0.00 0.00 0.00 4.26
637 721 1.520787 GCCATGACCGAGGTTACCG 60.521 63.158 0.00 0.00 0.00 4.02
640 724 2.897207 CCGCCATGACCGAGGTTA 59.103 61.111 0.00 0.00 0.00 2.85
641 725 4.778143 GCCGCCATGACCGAGGTT 62.778 66.667 0.00 0.00 0.00 3.50
646 730 3.891400 CCATTGCCGCCATGACCG 61.891 66.667 6.01 0.00 0.00 4.79
678 762 1.605165 GAAATCCCCCACGTTGGCA 60.605 57.895 0.00 0.00 35.79 4.92
679 763 0.898326 AAGAAATCCCCCACGTTGGC 60.898 55.000 0.00 0.00 35.79 4.52
680 764 1.627864 AAAGAAATCCCCCACGTTGG 58.372 50.000 0.00 0.00 37.25 3.77
681 765 4.142249 GGAATAAAGAAATCCCCCACGTTG 60.142 45.833 0.00 0.00 0.00 4.10
684 768 2.616842 CGGAATAAAGAAATCCCCCACG 59.383 50.000 0.00 0.00 0.00 4.94
686 770 2.661718 GCGGAATAAAGAAATCCCCCA 58.338 47.619 0.00 0.00 0.00 4.96
695 780 2.210116 GCCAGATTCGCGGAATAAAGA 58.790 47.619 6.13 0.00 31.89 2.52
696 781 1.264288 GGCCAGATTCGCGGAATAAAG 59.736 52.381 6.13 0.00 31.89 1.85
697 782 1.305201 GGCCAGATTCGCGGAATAAA 58.695 50.000 6.13 0.00 31.89 1.40
698 783 0.534203 GGGCCAGATTCGCGGAATAA 60.534 55.000 6.13 0.00 31.89 1.40
699 784 1.070786 GGGCCAGATTCGCGGAATA 59.929 57.895 6.13 0.00 31.89 1.75
715 800 3.188786 CGCGAAAAGAGAGGCGGG 61.189 66.667 0.00 0.00 44.50 6.13
718 803 3.500642 GGGCGCGAAAAGAGAGGC 61.501 66.667 12.10 0.00 0.00 4.70
720 805 1.497722 GTTGGGCGCGAAAAGAGAG 59.502 57.895 12.10 0.00 0.00 3.20
726 811 4.931633 TTCCGGTTGGGCGCGAAA 62.932 61.111 12.10 0.00 35.24 3.46
727 812 4.931633 TTTCCGGTTGGGCGCGAA 62.932 61.111 12.10 0.00 35.24 4.70
728 813 4.931633 TTTTCCGGTTGGGCGCGA 62.932 61.111 12.10 0.00 35.24 5.87
730 815 4.717629 GCTTTTCCGGTTGGGCGC 62.718 66.667 0.00 0.00 35.24 6.53
731 816 4.050934 GGCTTTTCCGGTTGGGCG 62.051 66.667 0.00 0.00 35.24 6.13
748 833 3.411808 TTCGAGGATCCGAAACACG 57.588 52.632 5.98 7.07 44.35 4.49
754 839 0.969149 CATGGGATTCGAGGATCCGA 59.031 55.000 5.98 6.67 45.40 4.55
755 840 0.036952 CCATGGGATTCGAGGATCCG 60.037 60.000 5.98 0.00 45.40 4.18
756 841 0.326264 CCCATGGGATTCGAGGATCC 59.674 60.000 28.27 2.48 44.03 3.36
757 842 1.352083 TCCCATGGGATTCGAGGATC 58.648 55.000 30.62 0.00 39.76 3.36
758 843 1.421646 GTTCCCATGGGATTCGAGGAT 59.578 52.381 34.21 0.00 44.74 3.24
759 844 0.837272 GTTCCCATGGGATTCGAGGA 59.163 55.000 34.21 14.89 44.74 3.71
760 845 0.546122 TGTTCCCATGGGATTCGAGG 59.454 55.000 34.21 3.97 44.74 4.63
761 846 1.475751 CCTGTTCCCATGGGATTCGAG 60.476 57.143 34.21 23.66 44.74 4.04
763 848 0.546122 TCCTGTTCCCATGGGATTCG 59.454 55.000 34.21 22.45 44.74 3.34
764 849 1.133668 CCTCCTGTTCCCATGGGATTC 60.134 57.143 34.21 27.16 44.74 2.52
765 850 0.929244 CCTCCTGTTCCCATGGGATT 59.071 55.000 34.21 0.00 44.74 3.01
767 852 0.178846 TTCCTCCTGTTCCCATGGGA 60.179 55.000 30.62 30.62 43.52 4.37
768 853 0.929244 ATTCCTCCTGTTCCCATGGG 59.071 55.000 26.30 26.30 0.00 4.00
769 854 1.565759 TGATTCCTCCTGTTCCCATGG 59.434 52.381 4.14 4.14 0.00 3.66
770 855 3.370840 TTGATTCCTCCTGTTCCCATG 57.629 47.619 0.00 0.00 0.00 3.66
771 856 3.270433 ACATTGATTCCTCCTGTTCCCAT 59.730 43.478 0.00 0.00 0.00 4.00
773 858 3.019564 CACATTGATTCCTCCTGTTCCC 58.980 50.000 0.00 0.00 0.00 3.97
774 859 3.441572 CACACATTGATTCCTCCTGTTCC 59.558 47.826 0.00 0.00 0.00 3.62
775 860 4.074970 ACACACATTGATTCCTCCTGTTC 58.925 43.478 0.00 0.00 0.00 3.18
776 861 3.822735 CACACACATTGATTCCTCCTGTT 59.177 43.478 0.00 0.00 0.00 3.16
778 863 3.189910 CACACACACATTGATTCCTCCTG 59.810 47.826 0.00 0.00 0.00 3.86
779 864 3.415212 CACACACACATTGATTCCTCCT 58.585 45.455 0.00 0.00 0.00 3.69
780 865 2.489329 CCACACACACATTGATTCCTCC 59.511 50.000 0.00 0.00 0.00 4.30
781 866 2.489329 CCCACACACACATTGATTCCTC 59.511 50.000 0.00 0.00 0.00 3.71
782 867 2.158475 ACCCACACACACATTGATTCCT 60.158 45.455 0.00 0.00 0.00 3.36
783 868 2.030007 CACCCACACACACATTGATTCC 60.030 50.000 0.00 0.00 0.00 3.01
784 869 2.030007 CCACCCACACACACATTGATTC 60.030 50.000 0.00 0.00 0.00 2.52
785 870 1.962807 CCACCCACACACACATTGATT 59.037 47.619 0.00 0.00 0.00 2.57
787 872 0.467106 CCCACCCACACACACATTGA 60.467 55.000 0.00 0.00 0.00 2.57
788 873 1.462731 CCCCACCCACACACACATTG 61.463 60.000 0.00 0.00 0.00 2.82
790 875 2.520458 CCCCACCCACACACACAT 59.480 61.111 0.00 0.00 0.00 3.21
791 876 3.814906 CCCCCACCCACACACACA 61.815 66.667 0.00 0.00 0.00 3.72
818 903 3.047877 GCGGTTCCTTGGGACACG 61.048 66.667 0.00 3.01 39.29 4.49
820 905 1.488705 ATGAGCGGTTCCTTGGGACA 61.489 55.000 0.00 0.00 0.00 4.02
822 907 1.602237 GATGAGCGGTTCCTTGGGA 59.398 57.895 0.00 0.00 0.00 4.37
823 908 1.452108 GGATGAGCGGTTCCTTGGG 60.452 63.158 0.00 0.00 0.00 4.12
824 909 0.107017 ATGGATGAGCGGTTCCTTGG 60.107 55.000 6.87 0.00 32.95 3.61
825 910 1.672881 GAATGGATGAGCGGTTCCTTG 59.327 52.381 6.87 0.00 32.95 3.61
826 911 1.561542 AGAATGGATGAGCGGTTCCTT 59.438 47.619 6.87 0.00 32.95 3.36
827 912 1.207791 AGAATGGATGAGCGGTTCCT 58.792 50.000 6.87 0.00 32.95 3.36
828 913 2.044123 AAGAATGGATGAGCGGTTCC 57.956 50.000 0.00 0.00 0.00 3.62
829 914 3.411415 CAAAGAATGGATGAGCGGTTC 57.589 47.619 0.00 0.00 0.00 3.62
842 969 6.771749 GGAGATGAATCACAGATCCAAAGAAT 59.228 38.462 0.00 0.00 37.16 2.40
844 971 5.678583 GGAGATGAATCACAGATCCAAAGA 58.321 41.667 0.00 0.00 37.16 2.52
846 973 4.162131 TCGGAGATGAATCACAGATCCAAA 59.838 41.667 0.00 0.00 37.08 3.28
854 981 2.159179 TCCCTCGGAGATGAATCACA 57.841 50.000 6.58 0.00 33.89 3.58
927 1087 3.437395 GCTGAATGCATCAATGGCAAAAA 59.563 39.130 0.00 0.00 45.60 1.94
928 1088 3.004171 GCTGAATGCATCAATGGCAAAA 58.996 40.909 0.00 0.00 45.60 2.44
972 1132 1.214589 GCAGGCAGGCAGAAACATG 59.785 57.895 0.00 0.00 0.00 3.21
973 1133 0.964358 GAGCAGGCAGGCAGAAACAT 60.964 55.000 0.00 0.00 35.83 2.71
1017 1177 5.035443 GTGTAGTACGGTAGCTTGAAGATG 58.965 45.833 0.00 0.00 0.00 2.90
1089 1249 0.671781 CCTGCTTGACGTTCCAGGAG 60.672 60.000 15.42 10.26 46.04 3.69
1155 1315 2.840753 GGGGACTGAAACCTGGCCA 61.841 63.158 4.71 4.71 32.75 5.36
1323 1483 6.924612 TGGATGAACACATGAAAGTTTCAATG 59.075 34.615 21.57 22.10 43.95 2.82
1334 1496 3.072915 AGGACAGTTGGATGAACACATGA 59.927 43.478 0.00 0.00 36.98 3.07
1346 1508 0.595095 GCAAGCAAGAGGACAGTTGG 59.405 55.000 0.00 0.00 0.00 3.77
1351 1513 0.535780 CACCAGCAAGCAAGAGGACA 60.536 55.000 0.00 0.00 0.00 4.02
1417 1579 2.671888 GCTAAGTTGGTAAGCCTCGTTC 59.328 50.000 0.00 0.00 35.27 3.95
1420 1582 2.094182 TCAGCTAAGTTGGTAAGCCTCG 60.094 50.000 0.00 0.00 36.92 4.63
1429 1591 8.668510 AGATACATAACATTCAGCTAAGTTGG 57.331 34.615 0.00 0.00 0.00 3.77
1445 1607 9.891828 CAGCAACTTAACAACAAAGATACATAA 57.108 29.630 0.00 0.00 0.00 1.90
1461 1624 7.880160 AATGGTCATATAAGCAGCAACTTAA 57.120 32.000 0.00 0.00 35.82 1.85
1464 1627 5.068198 CCAAATGGTCATATAAGCAGCAACT 59.932 40.000 0.00 0.00 0.00 3.16
1560 1793 6.209391 AGTTGCCTTTTAGCATTATCAGTTGT 59.791 34.615 0.00 0.00 43.64 3.32
1663 1896 2.435059 GCTTCTCCGGTGCCAGTC 60.435 66.667 0.00 0.00 0.00 3.51
1873 2109 8.587111 GGTTCGTTTACCTCTTAAGTTATTACG 58.413 37.037 1.63 7.27 35.23 3.18
2258 2497 3.127895 GTGGCTGTTTATTATTGTGGCGA 59.872 43.478 0.00 0.00 0.00 5.54
2411 2650 1.608055 CACCAGATCTGCACCAAACA 58.392 50.000 17.76 0.00 0.00 2.83
2549 2788 9.642343 AAAGTAGGAAGGAAAAGAGTGTTTTAT 57.358 29.630 0.00 0.00 0.00 1.40
2596 2835 1.337260 ACAAGCACGAGACATCACCTC 60.337 52.381 0.00 0.00 0.00 3.85
2766 3008 1.148273 AAGTCCACGCCACACACAT 59.852 52.632 0.00 0.00 0.00 3.21
2798 3042 0.463620 GCAAACCACCAGAGCCAAAA 59.536 50.000 0.00 0.00 0.00 2.44
2837 3081 3.547746 TGTTGTACCGAAAAAGGCTTCT 58.452 40.909 0.00 0.00 33.69 2.85
2838 3082 3.974871 TGTTGTACCGAAAAAGGCTTC 57.025 42.857 0.00 0.00 33.69 3.86
3514 3758 8.813951 GGGAACTAAATAGTAGCATGTACCTAT 58.186 37.037 0.00 0.00 34.99 2.57
3649 3893 1.812235 TTAGTCCGACACGCTAGTCA 58.188 50.000 0.40 0.00 38.43 3.41
3650 3894 3.417690 AATTAGTCCGACACGCTAGTC 57.582 47.619 0.40 0.00 35.19 2.59
4262 4507 5.179045 ACTTTTGCAGTGATGACAGAAAG 57.821 39.130 0.00 0.00 32.83 2.62
4282 4527 5.939883 TGCAAAGCATAGTCAGACATTTACT 59.060 36.000 2.66 0.00 31.71 2.24
4436 4681 6.591448 GGGGAAAATGTTAGATCTGCAAAAAG 59.409 38.462 5.18 0.00 0.00 2.27
4536 4782 8.567948 TGAATTTAGCACTTTGTCCTTTTCTAG 58.432 33.333 0.00 0.00 0.00 2.43
4665 4912 5.095490 GCTTCAACCATTCCTATTGAAACG 58.905 41.667 0.00 0.00 40.74 3.60
4800 5047 4.853007 AGCTATGCAGGAAATATGGGATC 58.147 43.478 0.00 0.00 0.00 3.36
4857 5105 6.652900 GCTCTCAGAAAGAACTAGACCAAATT 59.347 38.462 0.00 0.00 32.23 1.82
5519 5783 7.814587 GGAATTGAAGGTCTAAATTTTCCACAG 59.185 37.037 0.00 0.00 32.32 3.66
5838 6142 3.006430 TGATACTCGTGCAGAAAGTTGGA 59.994 43.478 0.00 0.00 0.00 3.53
5926 6230 5.869753 ATTTCACATGCAGACTCAAGTAC 57.130 39.130 0.00 0.00 0.00 2.73
6024 6328 9.255304 GGCATGTAAAAGAACATCAGTTAAAAA 57.745 29.630 0.00 0.00 38.01 1.94
6029 6333 6.594788 ATGGCATGTAAAAGAACATCAGTT 57.405 33.333 0.00 0.00 38.01 3.16
6030 6334 6.392354 CAATGGCATGTAAAAGAACATCAGT 58.608 36.000 0.00 0.00 38.01 3.41
6424 6729 8.537858 TCTAAGTCCCTAAAACTTGAAGTATCC 58.462 37.037 0.00 0.00 37.52 2.59
6483 6789 2.191128 ACAGATCAACCAGAAGCACC 57.809 50.000 0.00 0.00 0.00 5.01
6538 6844 2.412089 GCCGTTAGTCTGTTGCACTAAG 59.588 50.000 0.00 0.00 37.08 2.18
6590 6896 7.166628 AGCAGTACGATGAAGATAAAAATCG 57.833 36.000 2.61 2.61 45.60 3.34
6634 6947 8.660295 AGGAAATGCATAATATGAACCATGAT 57.340 30.769 0.00 0.00 0.00 2.45
6745 7058 1.547372 CTTTTTCGGACGGAGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
6746 7059 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
6747 7060 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
6748 7061 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
6749 7062 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
6750 7063 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
6751 7064 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
6752 7065 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
6753 7066 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
6754 7067 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
6755 7068 1.314730 TGGGACAAGCTTTTTCGGAC 58.685 50.000 0.00 0.00 31.92 4.79
6756 7069 3.811031 TGGGACAAGCTTTTTCGGA 57.189 47.368 0.00 0.00 31.92 4.55
6768 7081 3.185203 AGGGGCAAGCTTGGGACA 61.185 61.111 27.10 0.00 0.00 4.02
6769 7082 2.677875 CAGGGGCAAGCTTGGGAC 60.678 66.667 27.10 11.04 0.00 4.46
6770 7083 3.983420 CCAGGGGCAAGCTTGGGA 61.983 66.667 27.10 0.00 0.00 4.37
6771 7084 4.305956 ACCAGGGGCAAGCTTGGG 62.306 66.667 27.10 20.47 34.99 4.12
6772 7085 2.993264 CACCAGGGGCAAGCTTGG 60.993 66.667 27.10 13.31 36.76 3.61
6773 7086 2.769652 TAGCACCAGGGGCAAGCTTG 62.770 60.000 22.44 22.44 36.80 4.01
6774 7087 2.490270 CTAGCACCAGGGGCAAGCTT 62.490 60.000 18.55 0.00 36.80 3.74
6775 7088 2.935481 TAGCACCAGGGGCAAGCT 60.935 61.111 18.55 7.14 39.22 3.74
6776 7089 2.276309 ATCTAGCACCAGGGGCAAGC 62.276 60.000 18.55 0.00 0.00 4.01
6777 7090 1.131638 TATCTAGCACCAGGGGCAAG 58.868 55.000 18.55 0.00 0.00 4.01
6778 7091 0.837272 GTATCTAGCACCAGGGGCAA 59.163 55.000 18.55 0.23 0.00 4.52
6779 7092 0.326143 TGTATCTAGCACCAGGGGCA 60.326 55.000 18.55 0.38 0.00 5.36
6780 7093 1.002544 GATGTATCTAGCACCAGGGGC 59.997 57.143 5.11 5.11 0.00 5.80
6781 7094 1.625818 GGATGTATCTAGCACCAGGGG 59.374 57.143 0.00 0.00 0.00 4.79
6782 7095 2.329267 TGGATGTATCTAGCACCAGGG 58.671 52.381 0.00 0.00 0.00 4.45
6783 7096 4.630644 AATGGATGTATCTAGCACCAGG 57.369 45.455 0.00 0.00 0.00 4.45
6784 7097 5.614308 TCAAATGGATGTATCTAGCACCAG 58.386 41.667 0.00 0.00 0.00 4.00
6785 7098 5.455183 CCTCAAATGGATGTATCTAGCACCA 60.455 44.000 0.00 0.00 0.00 4.17
6786 7099 4.999950 CCTCAAATGGATGTATCTAGCACC 59.000 45.833 0.00 0.00 0.00 5.01
6787 7100 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
6788 7101 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
6789 7102 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
6790 7103 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
6791 7104 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
6792 7105 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
6793 7106 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
6794 7107 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
6795 7108 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
6796 7109 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
6797 7110 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
6798 7111 3.463048 AAGCTTGTCCCTCAAATGGAT 57.537 42.857 0.00 0.00 35.48 3.41
6799 7112 2.978156 AAGCTTGTCCCTCAAATGGA 57.022 45.000 0.00 0.00 35.48 3.41
6800 7113 4.309933 GAAAAAGCTTGTCCCTCAAATGG 58.690 43.478 0.00 0.00 35.48 3.16
6801 7114 3.983344 CGAAAAAGCTTGTCCCTCAAATG 59.017 43.478 0.00 0.00 35.48 2.32
6802 7115 3.005791 CCGAAAAAGCTTGTCCCTCAAAT 59.994 43.478 0.00 0.00 35.48 2.32
6803 7116 2.360801 CCGAAAAAGCTTGTCCCTCAAA 59.639 45.455 0.00 0.00 35.48 2.69
6804 7117 1.953686 CCGAAAAAGCTTGTCCCTCAA 59.046 47.619 0.00 0.00 34.61 3.02
6805 7118 1.142060 TCCGAAAAAGCTTGTCCCTCA 59.858 47.619 0.00 0.00 0.00 3.86
6806 7119 1.535896 GTCCGAAAAAGCTTGTCCCTC 59.464 52.381 0.00 0.00 0.00 4.30
6807 7120 1.133915 TGTCCGAAAAAGCTTGTCCCT 60.134 47.619 0.00 0.00 0.00 4.20
6808 7121 1.314730 TGTCCGAAAAAGCTTGTCCC 58.685 50.000 0.00 0.00 0.00 4.46
6809 7122 3.372060 CTTTGTCCGAAAAAGCTTGTCC 58.628 45.455 0.00 0.00 0.00 4.02
6810 7123 3.372060 CCTTTGTCCGAAAAAGCTTGTC 58.628 45.455 0.00 0.00 34.03 3.18
6811 7124 2.100749 CCCTTTGTCCGAAAAAGCTTGT 59.899 45.455 0.00 0.00 34.03 3.16
6812 7125 2.360801 TCCCTTTGTCCGAAAAAGCTTG 59.639 45.455 0.00 0.00 34.03 4.01
6813 7126 2.623416 CTCCCTTTGTCCGAAAAAGCTT 59.377 45.455 5.61 0.00 34.03 3.74
6814 7127 2.230660 CTCCCTTTGTCCGAAAAAGCT 58.769 47.619 5.61 0.00 34.03 3.74
6815 7128 1.954382 ACTCCCTTTGTCCGAAAAAGC 59.046 47.619 5.61 0.00 34.03 3.51
6816 7129 4.386711 ACTACTCCCTTTGTCCGAAAAAG 58.613 43.478 4.25 4.25 34.94 2.27
6817 7130 4.426736 ACTACTCCCTTTGTCCGAAAAA 57.573 40.909 0.00 0.00 0.00 1.94
6818 7131 4.559300 CGTACTACTCCCTTTGTCCGAAAA 60.559 45.833 0.00 0.00 0.00 2.29
6819 7132 3.057315 CGTACTACTCCCTTTGTCCGAAA 60.057 47.826 0.00 0.00 0.00 3.46
6820 7133 2.489329 CGTACTACTCCCTTTGTCCGAA 59.511 50.000 0.00 0.00 0.00 4.30
6821 7134 2.086869 CGTACTACTCCCTTTGTCCGA 58.913 52.381 0.00 0.00 0.00 4.55
6822 7135 1.468736 GCGTACTACTCCCTTTGTCCG 60.469 57.143 0.00 0.00 0.00 4.79
6823 7136 1.823610 AGCGTACTACTCCCTTTGTCC 59.176 52.381 0.00 0.00 0.00 4.02
6824 7137 4.915158 ATAGCGTACTACTCCCTTTGTC 57.085 45.455 0.00 0.00 0.00 3.18
6825 7138 4.708421 TCAATAGCGTACTACTCCCTTTGT 59.292 41.667 0.00 0.00 0.00 2.83
6826 7139 5.258456 TCAATAGCGTACTACTCCCTTTG 57.742 43.478 0.00 0.00 0.00 2.77
6827 7140 6.481434 AATCAATAGCGTACTACTCCCTTT 57.519 37.500 0.00 0.00 0.00 3.11
6828 7141 6.481434 AAATCAATAGCGTACTACTCCCTT 57.519 37.500 0.00 0.00 0.00 3.95
6829 7142 6.481434 AAAATCAATAGCGTACTACTCCCT 57.519 37.500 0.00 0.00 0.00 4.20
6830 7143 7.707893 TGTTAAAATCAATAGCGTACTACTCCC 59.292 37.037 0.00 0.00 0.00 4.30
6831 7144 8.638685 TGTTAAAATCAATAGCGTACTACTCC 57.361 34.615 0.00 0.00 0.00 3.85
7552 7875 5.464030 AATGCTGCTGAAGAATGAAGTTT 57.536 34.783 0.00 0.00 0.00 2.66
7656 7979 6.070881 AGCCAAAATTATGTCCAAACAGCATA 60.071 34.615 0.00 0.00 39.20 3.14
7660 7983 7.872483 AGTTTAGCCAAAATTATGTCCAAACAG 59.128 33.333 0.00 0.00 39.20 3.16
7661 7984 7.731054 AGTTTAGCCAAAATTATGTCCAAACA 58.269 30.769 0.00 0.00 40.38 2.83
7715 8038 9.874205 TTTGAGACAAATCCAATCCAATATTTC 57.126 29.630 0.00 0.00 0.00 2.17
7977 8306 4.021102 AGTGGGATCGTTGATTGTTTCT 57.979 40.909 0.00 0.00 0.00 2.52
8114 8443 1.995376 ACCTTGCCACTAAAACCAGG 58.005 50.000 0.00 0.00 0.00 4.45
8284 8615 3.895656 TCTCCCGGGTGTTATCTATTCAG 59.104 47.826 22.86 5.42 0.00 3.02
8285 8616 3.918566 TCTCCCGGGTGTTATCTATTCA 58.081 45.455 22.86 0.00 0.00 2.57
8376 8707 1.089920 ACAAATCACATGCGAGGCTC 58.910 50.000 3.87 3.87 0.00 4.70
8443 8777 5.048013 GGGAAAACAAGTTAGATCCAAGGTG 60.048 44.000 11.82 0.00 0.00 4.00
8444 8778 5.077564 GGGAAAACAAGTTAGATCCAAGGT 58.922 41.667 11.82 0.00 0.00 3.50
8445 8779 5.076873 TGGGAAAACAAGTTAGATCCAAGG 58.923 41.667 11.82 0.00 0.00 3.61
8446 8780 6.648879 TTGGGAAAACAAGTTAGATCCAAG 57.351 37.500 11.82 0.00 0.00 3.61
8460 9102 4.627035 GCAGCAGATGTATTTTGGGAAAAC 59.373 41.667 0.00 0.00 32.37 2.43
8463 9105 3.429492 TGCAGCAGATGTATTTTGGGAA 58.571 40.909 0.00 0.00 0.00 3.97
8583 9225 1.804748 GACTAGGCCTTGTCCGTTTTG 59.195 52.381 30.27 0.00 30.87 2.44
8600 9242 1.674817 CCTACAATTTGCCGGTCGACT 60.675 52.381 16.46 0.00 0.00 4.18
8601 9243 0.725117 CCTACAATTTGCCGGTCGAC 59.275 55.000 7.13 7.13 0.00 4.20
8602 9244 0.609151 TCCTACAATTTGCCGGTCGA 59.391 50.000 1.90 0.00 0.00 4.20
8603 9245 1.129811 GTTCCTACAATTTGCCGGTCG 59.870 52.381 1.90 0.00 0.00 4.79
8604 9246 2.156098 TGTTCCTACAATTTGCCGGTC 58.844 47.619 1.90 0.00 0.00 4.79
8605 9247 2.279935 TGTTCCTACAATTTGCCGGT 57.720 45.000 1.90 0.00 0.00 5.28
8606 9248 2.294791 TGTTGTTCCTACAATTTGCCGG 59.705 45.455 0.00 0.00 45.41 6.13
8607 9249 3.634568 TGTTGTTCCTACAATTTGCCG 57.365 42.857 0.00 0.00 45.41 5.69
8608 9250 4.749598 CCTTTGTTGTTCCTACAATTTGCC 59.250 41.667 0.00 0.00 45.41 4.52
8609 9251 5.462068 GTCCTTTGTTGTTCCTACAATTTGC 59.538 40.000 0.00 0.00 45.41 3.68
8610 9252 5.983118 GGTCCTTTGTTGTTCCTACAATTTG 59.017 40.000 0.00 0.00 45.41 2.32
8611 9253 5.221165 CGGTCCTTTGTTGTTCCTACAATTT 60.221 40.000 0.00 0.00 45.41 1.82
8612 9254 4.277423 CGGTCCTTTGTTGTTCCTACAATT 59.723 41.667 0.00 0.00 45.41 2.32
8613 9255 3.818773 CGGTCCTTTGTTGTTCCTACAAT 59.181 43.478 0.00 0.00 45.41 2.71
8614 9256 3.207778 CGGTCCTTTGTTGTTCCTACAA 58.792 45.455 0.00 0.00 41.82 2.41
8615 9257 2.841215 CGGTCCTTTGTTGTTCCTACA 58.159 47.619 0.00 0.00 0.00 2.74
8616 9258 1.534163 GCGGTCCTTTGTTGTTCCTAC 59.466 52.381 0.00 0.00 0.00 3.18
8617 9259 1.874739 CGCGGTCCTTTGTTGTTCCTA 60.875 52.381 0.00 0.00 0.00 2.94
8618 9260 1.164041 CGCGGTCCTTTGTTGTTCCT 61.164 55.000 0.00 0.00 0.00 3.36
8619 9261 1.161563 TCGCGGTCCTTTGTTGTTCC 61.162 55.000 6.13 0.00 0.00 3.62
8620 9262 0.658897 TTCGCGGTCCTTTGTTGTTC 59.341 50.000 6.13 0.00 0.00 3.18
8621 9263 0.661020 CTTCGCGGTCCTTTGTTGTT 59.339 50.000 6.13 0.00 0.00 2.83
8622 9264 0.179067 TCTTCGCGGTCCTTTGTTGT 60.179 50.000 6.13 0.00 0.00 3.32
8623 9265 0.941542 TTCTTCGCGGTCCTTTGTTG 59.058 50.000 6.13 0.00 0.00 3.33
8624 9266 0.942252 GTTCTTCGCGGTCCTTTGTT 59.058 50.000 6.13 0.00 0.00 2.83
8625 9267 1.219522 CGTTCTTCGCGGTCCTTTGT 61.220 55.000 6.13 0.00 0.00 2.83
8626 9268 1.491563 CGTTCTTCGCGGTCCTTTG 59.508 57.895 6.13 0.00 0.00 2.77
8627 9269 1.666872 CCGTTCTTCGCGGTCCTTT 60.667 57.895 6.13 0.00 43.84 3.11
8628 9270 2.048503 CCGTTCTTCGCGGTCCTT 60.049 61.111 6.13 0.00 43.84 3.36
8634 9276 2.426183 CGACTGACCGTTCTTCGCG 61.426 63.158 0.00 0.00 38.35 5.87
8635 9277 1.335697 GACGACTGACCGTTCTTCGC 61.336 60.000 4.84 0.00 43.49 4.70
8636 9278 1.058590 CGACGACTGACCGTTCTTCG 61.059 60.000 0.00 3.64 43.49 3.79
8637 9279 1.335697 GCGACGACTGACCGTTCTTC 61.336 60.000 0.00 0.00 43.49 2.87
8638 9280 1.371389 GCGACGACTGACCGTTCTT 60.371 57.895 0.00 0.00 43.49 2.52
8639 9281 2.254651 GCGACGACTGACCGTTCT 59.745 61.111 0.00 0.00 43.49 3.01
8640 9282 2.804090 GGCGACGACTGACCGTTC 60.804 66.667 0.00 0.00 43.49 3.95
8663 9353 9.857957 CCTATATATTCCTCATGATCATGATCG 57.142 37.037 32.96 25.65 45.74 3.69
8720 9414 2.341257 ACAACATCAGCTAGCTCAACG 58.659 47.619 16.15 3.52 0.00 4.10
8721 9415 4.667668 CGAAACAACATCAGCTAGCTCAAC 60.668 45.833 16.15 0.00 0.00 3.18
8723 9417 2.995939 CGAAACAACATCAGCTAGCTCA 59.004 45.455 16.15 0.71 0.00 4.26
8724 9418 2.349886 CCGAAACAACATCAGCTAGCTC 59.650 50.000 16.15 0.00 0.00 4.09
8725 9419 2.350522 CCGAAACAACATCAGCTAGCT 58.649 47.619 12.68 12.68 0.00 3.32
8726 9420 1.202076 GCCGAAACAACATCAGCTAGC 60.202 52.381 6.62 6.62 0.00 3.42
8727 9421 2.350522 AGCCGAAACAACATCAGCTAG 58.649 47.619 0.00 0.00 29.02 3.42
8728 9422 2.472695 AGCCGAAACAACATCAGCTA 57.527 45.000 0.00 0.00 29.02 3.32
8730 9424 2.346803 TCTAGCCGAAACAACATCAGC 58.653 47.619 0.00 0.00 0.00 4.26
8731 9425 3.849911 TCTCTAGCCGAAACAACATCAG 58.150 45.455 0.00 0.00 0.00 2.90
8733 9427 5.607119 TTTTCTCTAGCCGAAACAACATC 57.393 39.130 6.55 0.00 30.72 3.06
8734 9428 5.163854 CGATTTTCTCTAGCCGAAACAACAT 60.164 40.000 6.55 0.15 30.72 2.71
8735 9429 4.151689 CGATTTTCTCTAGCCGAAACAACA 59.848 41.667 6.55 0.00 30.72 3.33
8736 9430 4.151867 ACGATTTTCTCTAGCCGAAACAAC 59.848 41.667 6.55 2.65 30.72 3.32
8744 9438 2.538861 GGCGTAACGATTTTCTCTAGCC 59.461 50.000 0.00 0.00 0.00 3.93
8752 9446 0.671163 TGAGCGGGCGTAACGATTTT 60.671 50.000 0.00 0.00 0.00 1.82
8787 9481 6.611642 ACCAGTAGTTATTATTCTCCAGAGCA 59.388 38.462 0.00 0.00 0.00 4.26
8832 9526 2.165437 TCATTTATTTCACAAGCCGGCC 59.835 45.455 26.15 5.07 0.00 6.13
8872 9566 1.064357 GGGAGAAGATCTCGACGACAC 59.936 57.143 0.00 0.00 44.28 3.67
8880 9574 1.104577 AGACGGCGGGAGAAGATCTC 61.105 60.000 13.24 0.00 42.66 2.75
8909 9603 6.472163 AGAAAACACGCAGAACATAAAAACAG 59.528 34.615 0.00 0.00 0.00 3.16
8917 9611 3.746492 GGAGTAGAAAACACGCAGAACAT 59.254 43.478 0.00 0.00 0.00 2.71
8919 9613 2.479275 GGGAGTAGAAAACACGCAGAAC 59.521 50.000 0.00 0.00 32.86 3.01
8936 9630 4.559704 GCTTACATTATGAGACGGAGGGAG 60.560 50.000 0.00 0.00 0.00 4.30
8937 9631 3.321111 GCTTACATTATGAGACGGAGGGA 59.679 47.826 0.00 0.00 0.00 4.20
8938 9632 3.555168 GGCTTACATTATGAGACGGAGGG 60.555 52.174 0.00 0.00 0.00 4.30
8939 9633 3.654414 GGCTTACATTATGAGACGGAGG 58.346 50.000 0.00 0.00 0.00 4.30
8940 9634 3.309388 CGGCTTACATTATGAGACGGAG 58.691 50.000 0.00 0.00 41.72 4.63
8941 9635 3.364889 CGGCTTACATTATGAGACGGA 57.635 47.619 0.00 0.00 41.72 4.69
8987 9681 6.932400 TCTATCACACAATGTAGGACGTTTTT 59.068 34.615 0.00 0.00 0.00 1.94
8988 9682 6.460781 TCTATCACACAATGTAGGACGTTTT 58.539 36.000 0.00 0.00 0.00 2.43
8989 9683 6.032956 TCTATCACACAATGTAGGACGTTT 57.967 37.500 0.00 0.00 0.00 3.60
8990 9684 5.394224 CCTCTATCACACAATGTAGGACGTT 60.394 44.000 0.00 0.00 0.00 3.99
8991 9685 4.098044 CCTCTATCACACAATGTAGGACGT 59.902 45.833 0.00 0.00 0.00 4.34
8992 9686 4.499865 CCCTCTATCACACAATGTAGGACG 60.500 50.000 0.00 0.00 0.00 4.79
8993 9687 4.649674 TCCCTCTATCACACAATGTAGGAC 59.350 45.833 0.00 0.00 0.00 3.85
8994 9688 4.878968 TCCCTCTATCACACAATGTAGGA 58.121 43.478 0.00 0.00 0.00 2.94
8995 9689 4.651503 ACTCCCTCTATCACACAATGTAGG 59.348 45.833 0.00 0.00 0.00 3.18
8996 9690 5.860941 ACTCCCTCTATCACACAATGTAG 57.139 43.478 0.00 0.00 0.00 2.74
8997 9691 6.432581 AGTACTCCCTCTATCACACAATGTA 58.567 40.000 0.00 0.00 0.00 2.29
8998 9692 5.273208 AGTACTCCCTCTATCACACAATGT 58.727 41.667 0.00 0.00 0.00 2.71
8999 9693 5.860941 AGTACTCCCTCTATCACACAATG 57.139 43.478 0.00 0.00 0.00 2.82
9000 9694 7.565398 ACATAAGTACTCCCTCTATCACACAAT 59.435 37.037 0.00 0.00 0.00 2.71
9001 9695 6.895756 ACATAAGTACTCCCTCTATCACACAA 59.104 38.462 0.00 0.00 0.00 3.33
9002 9696 6.321435 CACATAAGTACTCCCTCTATCACACA 59.679 42.308 0.00 0.00 0.00 3.72
9003 9697 6.321690 ACACATAAGTACTCCCTCTATCACAC 59.678 42.308 0.00 0.00 0.00 3.82
9004 9698 6.321435 CACACATAAGTACTCCCTCTATCACA 59.679 42.308 0.00 0.00 0.00 3.58
9005 9699 6.321690 ACACACATAAGTACTCCCTCTATCAC 59.678 42.308 0.00 0.00 0.00 3.06
9006 9700 6.321435 CACACACATAAGTACTCCCTCTATCA 59.679 42.308 0.00 0.00 0.00 2.15
9007 9701 6.321690 ACACACACATAAGTACTCCCTCTATC 59.678 42.308 0.00 0.00 0.00 2.08
9008 9702 6.096987 CACACACACATAAGTACTCCCTCTAT 59.903 42.308 0.00 0.00 0.00 1.98
9009 9703 5.417894 CACACACACATAAGTACTCCCTCTA 59.582 44.000 0.00 0.00 0.00 2.43
9010 9704 4.220821 CACACACACATAAGTACTCCCTCT 59.779 45.833 0.00 0.00 0.00 3.69
9011 9705 4.219944 TCACACACACATAAGTACTCCCTC 59.780 45.833 0.00 0.00 0.00 4.30
9012 9706 4.157246 TCACACACACATAAGTACTCCCT 58.843 43.478 0.00 0.00 0.00 4.20
9013 9707 4.530710 TCACACACACATAAGTACTCCC 57.469 45.455 0.00 0.00 0.00 4.30
9014 9708 6.163476 TGAATCACACACACATAAGTACTCC 58.837 40.000 0.00 0.00 0.00 3.85
9015 9709 7.148573 CCTTGAATCACACACACATAAGTACTC 60.149 40.741 0.00 0.00 0.00 2.59
9016 9710 6.650807 CCTTGAATCACACACACATAAGTACT 59.349 38.462 0.00 0.00 0.00 2.73
9017 9711 6.620733 GCCTTGAATCACACACACATAAGTAC 60.621 42.308 0.00 0.00 0.00 2.73
9018 9712 5.411361 GCCTTGAATCACACACACATAAGTA 59.589 40.000 0.00 0.00 0.00 2.24
9019 9713 4.216257 GCCTTGAATCACACACACATAAGT 59.784 41.667 0.00 0.00 0.00 2.24
9117 9891 9.708222 CGGTTCACATCAAGATTATAAAAGAAG 57.292 33.333 0.00 0.00 0.00 2.85
9120 9894 8.450964 ACACGGTTCACATCAAGATTATAAAAG 58.549 33.333 0.00 0.00 0.00 2.27
9134 9914 1.338107 TCAGAGGACACGGTTCACAT 58.662 50.000 0.00 0.00 0.00 3.21
9146 9926 2.251818 CCAGGTTCAGACTTCAGAGGA 58.748 52.381 0.00 0.00 0.00 3.71
9184 9964 2.035321 TCCGCACCAAAGAAAATGGAAC 59.965 45.455 0.00 0.00 40.56 3.62
9215 9995 4.095610 CAACAAGGTGACGTTTCTGTTTC 58.904 43.478 0.00 0.00 0.00 2.78
9324 10105 6.775088 TCGCTAAATGTTTCACTGATGAATC 58.225 36.000 0.00 0.00 44.36 2.52
9333 10114 5.113529 CGACACTTTTCGCTAAATGTTTCAC 59.886 40.000 12.99 2.08 32.81 3.18
9374 10155 0.674895 GCAAGATGAGTGCGACCCTT 60.675 55.000 0.00 0.00 31.20 3.95
9427 10209 5.379187 TGGAAGGGAACAGTTAAACTAACC 58.621 41.667 0.00 0.00 39.47 2.85
9512 10296 7.942341 ACAAATAAAAGTCATGTAGAAGTCCCA 59.058 33.333 0.00 0.00 0.00 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.