Multiple sequence alignment - TraesCS2A01G123400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G123400 chr2A 100.000 3746 0 0 1 3746 72933972 72930227 0.000000e+00 6918.0
1 TraesCS2A01G123400 chr2A 83.004 1518 217 27 1108 2597 72814094 72812590 0.000000e+00 1336.0
2 TraesCS2A01G123400 chr2A 90.323 713 54 9 3039 3745 588260793 588261496 0.000000e+00 920.0
3 TraesCS2A01G123400 chr2A 83.176 743 90 17 3033 3745 598148132 598148869 0.000000e+00 647.0
4 TraesCS2A01G123400 chr2A 82.462 325 49 5 2275 2597 72811770 72811452 1.020000e-70 278.0
5 TraesCS2A01G123400 chr2A 81.871 171 12 11 263 433 72928910 72929061 3.930000e-25 126.0
6 TraesCS2A01G123400 chr2A 88.608 79 9 0 42 120 559102370 559102448 3.080000e-16 97.1
7 TraesCS2A01G123400 chr2A 88.608 79 8 1 45 122 80199964 80199886 1.110000e-15 95.3
8 TraesCS2A01G123400 chr2D 93.932 2060 93 16 824 2867 73454612 73452569 0.000000e+00 3083.0
9 TraesCS2A01G123400 chr2D 82.675 1518 225 25 1108 2597 73417413 73415906 0.000000e+00 1312.0
10 TraesCS2A01G123400 chr2D 92.233 309 23 1 433 740 205625010 205625318 1.600000e-118 436.0
11 TraesCS2A01G123400 chr2D 86.517 178 11 5 2868 3038 73454341 73454512 2.300000e-42 183.0
12 TraesCS2A01G123400 chr2D 93.814 97 4 1 738 834 73456531 73456437 1.080000e-30 145.0
13 TraesCS2A01G123400 chr2B 91.806 2148 124 26 737 2870 111359310 111361419 0.000000e+00 2944.0
14 TraesCS2A01G123400 chr2B 81.518 1515 242 25 1108 2597 111081874 111080373 0.000000e+00 1212.0
15 TraesCS2A01G123400 chr2B 92.233 309 22 2 433 740 717045657 717045350 1.600000e-118 436.0
16 TraesCS2A01G123400 chr2B 87.719 171 12 4 2871 3041 111359627 111359466 1.370000e-44 191.0
17 TraesCS2A01G123400 chr2B 86.982 169 7 4 263 431 111359146 111359299 3.850000e-40 176.0
18 TraesCS2A01G123400 chr7A 80.526 1484 259 24 1112 2586 81548322 81549784 0.000000e+00 1112.0
19 TraesCS2A01G123400 chr7A 79.178 1508 250 41 1101 2592 518658743 518657284 0.000000e+00 987.0
20 TraesCS2A01G123400 chr7A 89.776 714 56 10 3039 3745 97875970 97875267 0.000000e+00 898.0
21 TraesCS2A01G123400 chr7A 92.182 307 20 4 433 738 156272462 156272159 7.430000e-117 431.0
22 TraesCS2A01G123400 chr7D 80.135 1485 263 26 1112 2586 78115570 78117032 0.000000e+00 1079.0
23 TraesCS2A01G123400 chr7D 92.357 314 23 1 424 737 511926820 511927132 2.650000e-121 446.0
24 TraesCS2A01G123400 chr5D 79.506 1498 250 50 1119 2589 371862159 371863626 0.000000e+00 1013.0
25 TraesCS2A01G123400 chr5D 87.572 692 68 13 3037 3715 521710574 521709888 0.000000e+00 785.0
26 TraesCS2A01G123400 chr5A 79.708 1439 242 43 1174 2589 475294948 475296359 0.000000e+00 994.0
27 TraesCS2A01G123400 chr5A 89.371 715 67 6 3037 3745 648614619 648615330 0.000000e+00 891.0
28 TraesCS2A01G123400 chr5A 87.222 720 79 10 3037 3745 636608930 636609647 0.000000e+00 808.0
29 TraesCS2A01G123400 chr5A 74.959 1218 260 36 1253 2444 706653475 706654673 5.550000e-143 518.0
30 TraesCS2A01G123400 chr3A 79.639 1385 257 17 1207 2586 33137245 33138609 0.000000e+00 972.0
31 TraesCS2A01G123400 chr6A 90.363 716 57 9 3037 3745 432569425 432568715 0.000000e+00 929.0
32 TraesCS2A01G123400 chr6A 88.172 93 11 0 25 117 530276838 530276746 1.100000e-20 111.0
33 TraesCS2A01G123400 chr6A 84.694 98 13 1 25 120 178073395 178073492 3.080000e-16 97.1
34 TraesCS2A01G123400 chr3D 88.089 722 68 11 3037 3744 125023354 125022637 0.000000e+00 841.0
35 TraesCS2A01G123400 chr3D 88.095 714 73 9 3039 3745 509148676 509149384 0.000000e+00 837.0
36 TraesCS2A01G123400 chr3D 95.820 311 12 1 430 739 428897532 428897222 5.590000e-138 501.0
37 TraesCS2A01G123400 chr3D 92.258 310 24 0 428 737 475868465 475868774 1.240000e-119 440.0
38 TraesCS2A01G123400 chr3D 91.909 309 25 0 431 739 123313298 123312990 2.070000e-117 433.0
39 TraesCS2A01G123400 chr3D 90.909 319 25 3 429 744 515967505 515967188 3.460000e-115 425.0
40 TraesCS2A01G123400 chr1A 87.518 713 68 14 3039 3745 449814065 449814762 0.000000e+00 804.0
41 TraesCS2A01G123400 chr1A 88.608 79 9 0 42 120 567989228 567989306 3.080000e-16 97.1
42 TraesCS2A01G123400 chr1A 88.462 78 7 2 45 122 541474343 541474268 3.980000e-15 93.5
43 TraesCS2A01G123400 chr7B 81.302 722 121 11 1112 1826 25339246 25339960 1.170000e-159 573.0
44 TraesCS2A01G123400 chr3B 97.742 310 7 0 430 739 560875695 560875386 5.510000e-148 534.0
45 TraesCS2A01G123400 chr3B 77.121 778 150 22 1817 2586 41849039 41849796 3.460000e-115 425.0
46 TraesCS2A01G123400 chr1B 85.714 105 14 1 16 120 606631487 606631384 3.960000e-20 110.0
47 TraesCS2A01G123400 chrUn 90.000 80 6 2 42 120 143923196 143923118 6.620000e-18 102.0
48 TraesCS2A01G123400 chr5B 91.667 72 5 1 45 115 459553365 459553294 8.560000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G123400 chr2A 72930227 72933972 3745 True 6918 6918 100.000 1 3746 1 chr2A.!!$R1 3745
1 TraesCS2A01G123400 chr2A 588260793 588261496 703 False 920 920 90.323 3039 3745 1 chr2A.!!$F3 706
2 TraesCS2A01G123400 chr2A 72811452 72814094 2642 True 807 1336 82.733 1108 2597 2 chr2A.!!$R3 1489
3 TraesCS2A01G123400 chr2A 598148132 598148869 737 False 647 647 83.176 3033 3745 1 chr2A.!!$F4 712
4 TraesCS2A01G123400 chr2D 73452569 73456531 3962 True 1614 3083 93.873 738 2867 2 chr2D.!!$R2 2129
5 TraesCS2A01G123400 chr2D 73415906 73417413 1507 True 1312 1312 82.675 1108 2597 1 chr2D.!!$R1 1489
6 TraesCS2A01G123400 chr2B 111359146 111361419 2273 False 1560 2944 89.394 263 2870 2 chr2B.!!$F1 2607
7 TraesCS2A01G123400 chr2B 111080373 111081874 1501 True 1212 1212 81.518 1108 2597 1 chr2B.!!$R1 1489
8 TraesCS2A01G123400 chr7A 81548322 81549784 1462 False 1112 1112 80.526 1112 2586 1 chr7A.!!$F1 1474
9 TraesCS2A01G123400 chr7A 518657284 518658743 1459 True 987 987 79.178 1101 2592 1 chr7A.!!$R3 1491
10 TraesCS2A01G123400 chr7A 97875267 97875970 703 True 898 898 89.776 3039 3745 1 chr7A.!!$R1 706
11 TraesCS2A01G123400 chr7D 78115570 78117032 1462 False 1079 1079 80.135 1112 2586 1 chr7D.!!$F1 1474
12 TraesCS2A01G123400 chr5D 371862159 371863626 1467 False 1013 1013 79.506 1119 2589 1 chr5D.!!$F1 1470
13 TraesCS2A01G123400 chr5D 521709888 521710574 686 True 785 785 87.572 3037 3715 1 chr5D.!!$R1 678
14 TraesCS2A01G123400 chr5A 475294948 475296359 1411 False 994 994 79.708 1174 2589 1 chr5A.!!$F1 1415
15 TraesCS2A01G123400 chr5A 648614619 648615330 711 False 891 891 89.371 3037 3745 1 chr5A.!!$F3 708
16 TraesCS2A01G123400 chr5A 636608930 636609647 717 False 808 808 87.222 3037 3745 1 chr5A.!!$F2 708
17 TraesCS2A01G123400 chr5A 706653475 706654673 1198 False 518 518 74.959 1253 2444 1 chr5A.!!$F4 1191
18 TraesCS2A01G123400 chr3A 33137245 33138609 1364 False 972 972 79.639 1207 2586 1 chr3A.!!$F1 1379
19 TraesCS2A01G123400 chr6A 432568715 432569425 710 True 929 929 90.363 3037 3745 1 chr6A.!!$R1 708
20 TraesCS2A01G123400 chr3D 125022637 125023354 717 True 841 841 88.089 3037 3744 1 chr3D.!!$R2 707
21 TraesCS2A01G123400 chr3D 509148676 509149384 708 False 837 837 88.095 3039 3745 1 chr3D.!!$F2 706
22 TraesCS2A01G123400 chr1A 449814065 449814762 697 False 804 804 87.518 3039 3745 1 chr1A.!!$F1 706
23 TraesCS2A01G123400 chr7B 25339246 25339960 714 False 573 573 81.302 1112 1826 1 chr7B.!!$F1 714
24 TraesCS2A01G123400 chr3B 41849039 41849796 757 False 425 425 77.121 1817 2586 1 chr3B.!!$F1 769

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.036010 CTTCCATGAGAGGCACGGTT 60.036 55.0 0.00 0.00 30.16 4.44 F
200 201 0.037605 GACGTGGACGGATTGAAGGT 60.038 55.0 0.00 0.00 44.95 3.50 F
879 2715 0.179012 GGAGAGAGGCGCTACTACCT 60.179 60.0 7.64 1.42 39.65 3.08 F
994 2839 0.960364 TTGCCCTTTCATCACGAGCC 60.960 55.0 0.00 0.00 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1911 3780 1.602771 GTACAGGGCCTGGAACCTC 59.397 63.158 35.34 13.46 35.51 3.85 R
1986 3855 2.029073 CAGTGCGTCGGGTTCACT 59.971 61.111 0.00 0.00 41.29 3.41 R
2335 4219 0.544357 TCCCTGATCCACCTCGTGTT 60.544 55.000 0.00 0.00 0.00 3.32 R
2954 4856 0.027716 CATCACGAGCTCAAGCATGC 59.972 55.000 15.40 10.51 45.16 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 3.940209 TCATCAGAACCATGGTTTTGC 57.060 42.857 33.11 21.15 39.24 3.68
52 53 3.499338 TCATCAGAACCATGGTTTTGCT 58.501 40.909 33.11 25.31 39.24 3.91
53 54 3.896888 TCATCAGAACCATGGTTTTGCTT 59.103 39.130 33.11 23.25 39.24 3.91
54 55 4.022068 TCATCAGAACCATGGTTTTGCTTC 60.022 41.667 33.11 20.29 39.24 3.86
55 56 2.627699 TCAGAACCATGGTTTTGCTTCC 59.372 45.455 33.11 19.25 39.24 3.46
56 57 2.364970 CAGAACCATGGTTTTGCTTCCA 59.635 45.455 29.14 0.00 38.60 3.53
57 58 3.007182 CAGAACCATGGTTTTGCTTCCAT 59.993 43.478 29.14 6.65 44.15 3.41
63 64 2.517959 TGGTTTTGCTTCCATGAGAGG 58.482 47.619 0.00 0.00 0.00 3.69
67 68 3.805267 GCTTCCATGAGAGGCACG 58.195 61.111 11.62 0.00 46.54 5.34
68 69 1.817099 GCTTCCATGAGAGGCACGG 60.817 63.158 11.62 0.00 46.54 4.94
69 70 1.599047 CTTCCATGAGAGGCACGGT 59.401 57.895 0.00 0.00 30.16 4.83
70 71 0.036010 CTTCCATGAGAGGCACGGTT 60.036 55.000 0.00 0.00 30.16 4.44
71 72 0.400213 TTCCATGAGAGGCACGGTTT 59.600 50.000 0.00 0.00 30.16 3.27
72 73 0.400213 TCCATGAGAGGCACGGTTTT 59.600 50.000 0.00 0.00 30.16 2.43
73 74 1.626321 TCCATGAGAGGCACGGTTTTA 59.374 47.619 0.00 0.00 30.16 1.52
74 75 1.737793 CCATGAGAGGCACGGTTTTAC 59.262 52.381 0.00 0.00 0.00 2.01
75 76 2.615493 CCATGAGAGGCACGGTTTTACT 60.615 50.000 0.00 0.00 0.00 2.24
76 77 2.922740 TGAGAGGCACGGTTTTACTT 57.077 45.000 0.00 0.00 0.00 2.24
77 78 3.202829 TGAGAGGCACGGTTTTACTTT 57.797 42.857 0.00 0.00 0.00 2.66
78 79 3.135994 TGAGAGGCACGGTTTTACTTTC 58.864 45.455 0.00 0.00 0.00 2.62
79 80 3.135994 GAGAGGCACGGTTTTACTTTCA 58.864 45.455 0.00 0.00 0.00 2.69
80 81 2.876550 AGAGGCACGGTTTTACTTTCAC 59.123 45.455 0.00 0.00 0.00 3.18
81 82 1.600485 AGGCACGGTTTTACTTTCACG 59.400 47.619 0.00 0.00 0.00 4.35
82 83 1.598601 GGCACGGTTTTACTTTCACGA 59.401 47.619 0.00 0.00 0.00 4.35
83 84 2.349155 GGCACGGTTTTACTTTCACGAG 60.349 50.000 0.00 0.00 0.00 4.18
84 85 2.540931 GCACGGTTTTACTTTCACGAGA 59.459 45.455 0.00 0.00 0.00 4.04
85 86 3.362693 GCACGGTTTTACTTTCACGAGAG 60.363 47.826 0.00 0.00 0.00 3.20
96 97 2.944429 ACGAGAGTCACGGTCGTG 59.056 61.111 16.33 16.33 44.89 4.35
97 98 2.502080 CGAGAGTCACGGTCGTGC 60.502 66.667 17.46 12.68 45.04 5.34
98 99 2.126424 GAGAGTCACGGTCGTGCC 60.126 66.667 17.46 7.52 45.04 5.01
99 100 2.597805 AGAGTCACGGTCGTGCCT 60.598 61.111 17.46 12.44 45.04 4.75
100 101 2.126424 GAGTCACGGTCGTGCCTC 60.126 66.667 16.63 16.63 42.51 4.70
101 102 2.597805 AGTCACGGTCGTGCCTCT 60.598 61.111 17.46 12.39 45.04 3.69
102 103 2.143594 GAGTCACGGTCGTGCCTCTT 62.144 60.000 22.01 6.17 44.66 2.85
103 104 2.022129 GTCACGGTCGTGCCTCTTG 61.022 63.158 17.46 0.00 45.04 3.02
104 105 2.197605 TCACGGTCGTGCCTCTTGA 61.198 57.895 17.46 0.00 45.04 3.02
105 106 1.300620 CACGGTCGTGCCTCTTGAA 60.301 57.895 10.59 0.00 39.39 2.69
106 107 0.878523 CACGGTCGTGCCTCTTGAAA 60.879 55.000 10.59 0.00 39.39 2.69
107 108 0.179067 ACGGTCGTGCCTCTTGAAAA 60.179 50.000 0.00 0.00 34.25 2.29
108 109 0.234884 CGGTCGTGCCTCTTGAAAAC 59.765 55.000 0.00 0.00 34.25 2.43
109 110 1.305201 GGTCGTGCCTCTTGAAAACA 58.695 50.000 0.00 0.00 0.00 2.83
110 111 1.673920 GGTCGTGCCTCTTGAAAACAA 59.326 47.619 0.00 0.00 0.00 2.83
111 112 2.098443 GGTCGTGCCTCTTGAAAACAAA 59.902 45.455 0.00 0.00 0.00 2.83
112 113 3.428316 GGTCGTGCCTCTTGAAAACAAAA 60.428 43.478 0.00 0.00 0.00 2.44
113 114 4.170256 GTCGTGCCTCTTGAAAACAAAAA 58.830 39.130 0.00 0.00 0.00 1.94
133 134 5.972107 AAAAGAAACATCTGGATGGACAG 57.028 39.130 14.06 0.00 42.91 3.51
143 144 4.219115 TCTGGATGGACAGATAGAGAACC 58.781 47.826 0.00 0.00 42.26 3.62
144 145 3.963374 CTGGATGGACAGATAGAGAACCA 59.037 47.826 0.00 0.00 40.97 3.67
145 146 4.560739 TGGATGGACAGATAGAGAACCAT 58.439 43.478 0.00 0.00 40.21 3.55
146 147 4.346127 TGGATGGACAGATAGAGAACCATG 59.654 45.833 0.00 0.00 38.09 3.66
147 148 4.346418 GGATGGACAGATAGAGAACCATGT 59.654 45.833 0.00 0.00 38.09 3.21
148 149 5.540337 GGATGGACAGATAGAGAACCATGTA 59.460 44.000 0.00 0.00 38.09 2.29
149 150 6.295011 GGATGGACAGATAGAGAACCATGTAG 60.295 46.154 0.00 0.00 38.09 2.74
150 151 4.342378 TGGACAGATAGAGAACCATGTAGC 59.658 45.833 0.00 0.00 0.00 3.58
151 152 4.342378 GGACAGATAGAGAACCATGTAGCA 59.658 45.833 0.00 0.00 0.00 3.49
152 153 5.011533 GGACAGATAGAGAACCATGTAGCAT 59.988 44.000 0.00 0.00 0.00 3.79
153 154 5.851720 ACAGATAGAGAACCATGTAGCATG 58.148 41.667 2.38 2.38 0.00 4.06
154 155 5.600069 ACAGATAGAGAACCATGTAGCATGA 59.400 40.000 10.34 0.00 0.00 3.07
155 156 5.925397 CAGATAGAGAACCATGTAGCATGAC 59.075 44.000 10.34 0.00 0.00 3.06
156 157 5.600069 AGATAGAGAACCATGTAGCATGACA 59.400 40.000 10.34 0.00 0.00 3.58
157 158 4.558226 AGAGAACCATGTAGCATGACAA 57.442 40.909 10.34 0.00 31.83 3.18
158 159 4.910195 AGAGAACCATGTAGCATGACAAA 58.090 39.130 10.34 0.00 31.83 2.83
159 160 5.316167 AGAGAACCATGTAGCATGACAAAA 58.684 37.500 10.34 0.00 31.83 2.44
160 161 5.182001 AGAGAACCATGTAGCATGACAAAAC 59.818 40.000 10.34 0.00 31.83 2.43
161 162 5.072741 AGAACCATGTAGCATGACAAAACT 58.927 37.500 10.34 0.00 31.83 2.66
162 163 5.182001 AGAACCATGTAGCATGACAAAACTC 59.818 40.000 10.34 0.00 31.83 3.01
163 164 3.436704 ACCATGTAGCATGACAAAACTCG 59.563 43.478 10.34 0.00 31.83 4.18
164 165 3.436704 CCATGTAGCATGACAAAACTCGT 59.563 43.478 10.34 0.00 31.83 4.18
165 166 4.397382 CATGTAGCATGACAAAACTCGTG 58.603 43.478 0.00 0.00 31.83 4.35
166 167 3.462982 TGTAGCATGACAAAACTCGTGT 58.537 40.909 0.00 0.00 30.83 4.49
167 168 3.493129 TGTAGCATGACAAAACTCGTGTC 59.507 43.478 0.00 0.00 44.67 3.67
168 169 1.873591 AGCATGACAAAACTCGTGTCC 59.126 47.619 0.00 0.00 43.95 4.02
169 170 1.398451 GCATGACAAAACTCGTGTCCG 60.398 52.381 0.00 0.00 43.95 4.79
170 171 0.865769 ATGACAAAACTCGTGTCCGC 59.134 50.000 2.35 0.00 43.95 5.54
171 172 1.155424 TGACAAAACTCGTGTCCGCC 61.155 55.000 2.35 0.00 43.95 6.13
172 173 2.154427 GACAAAACTCGTGTCCGCCG 62.154 60.000 0.00 0.00 39.62 6.46
173 174 2.107546 AAAACTCGTGTCCGCCGT 59.892 55.556 0.00 0.00 0.00 5.68
174 175 1.952635 AAAACTCGTGTCCGCCGTC 60.953 57.895 0.00 0.00 0.00 4.79
175 176 2.359570 AAAACTCGTGTCCGCCGTCT 62.360 55.000 0.00 0.00 0.00 4.18
176 177 1.518056 AAACTCGTGTCCGCCGTCTA 61.518 55.000 0.00 0.00 0.00 2.59
177 178 1.919956 AACTCGTGTCCGCCGTCTAG 61.920 60.000 0.00 0.00 0.00 2.43
178 179 2.046988 TCGTGTCCGCCGTCTAGA 60.047 61.111 0.00 0.00 0.00 2.43
179 180 2.099831 CGTGTCCGCCGTCTAGAC 59.900 66.667 13.18 13.18 0.00 2.59
180 181 2.683859 CGTGTCCGCCGTCTAGACA 61.684 63.158 22.37 0.00 38.17 3.41
181 182 1.136984 GTGTCCGCCGTCTAGACAG 59.863 63.158 22.37 12.64 40.98 3.51
182 183 1.002990 TGTCCGCCGTCTAGACAGA 60.003 57.895 22.37 10.20 35.67 3.41
183 184 1.303799 TGTCCGCCGTCTAGACAGAC 61.304 60.000 22.37 20.03 46.60 3.51
190 191 3.971858 GTCTAGACAGACGTGGACG 57.028 57.895 18.20 0.00 41.79 4.79
191 192 0.447011 GTCTAGACAGACGTGGACGG 59.553 60.000 18.20 0.00 41.79 4.79
192 193 0.322648 TCTAGACAGACGTGGACGGA 59.677 55.000 0.00 0.00 44.95 4.69
193 194 1.065636 TCTAGACAGACGTGGACGGAT 60.066 52.381 0.00 0.00 44.95 4.18
194 195 1.743958 CTAGACAGACGTGGACGGATT 59.256 52.381 0.00 0.00 44.95 3.01
195 196 0.243907 AGACAGACGTGGACGGATTG 59.756 55.000 0.00 1.80 44.95 2.67
196 197 0.242825 GACAGACGTGGACGGATTGA 59.757 55.000 0.00 0.00 44.95 2.57
197 198 0.677288 ACAGACGTGGACGGATTGAA 59.323 50.000 0.00 0.00 44.95 2.69
198 199 1.336887 ACAGACGTGGACGGATTGAAG 60.337 52.381 0.00 0.00 44.95 3.02
199 200 0.246635 AGACGTGGACGGATTGAAGG 59.753 55.000 0.00 0.00 44.95 3.46
200 201 0.037605 GACGTGGACGGATTGAAGGT 60.038 55.000 0.00 0.00 44.95 3.50
201 202 0.395312 ACGTGGACGGATTGAAGGTT 59.605 50.000 3.93 0.00 44.95 3.50
202 203 1.202722 ACGTGGACGGATTGAAGGTTT 60.203 47.619 3.93 0.00 44.95 3.27
203 204 2.037511 ACGTGGACGGATTGAAGGTTTA 59.962 45.455 3.93 0.00 44.95 2.01
204 205 2.671396 CGTGGACGGATTGAAGGTTTAG 59.329 50.000 0.00 0.00 35.37 1.85
205 206 3.615592 CGTGGACGGATTGAAGGTTTAGA 60.616 47.826 0.00 0.00 35.37 2.10
206 207 3.933332 GTGGACGGATTGAAGGTTTAGAG 59.067 47.826 0.00 0.00 0.00 2.43
207 208 3.835978 TGGACGGATTGAAGGTTTAGAGA 59.164 43.478 0.00 0.00 0.00 3.10
208 209 4.469945 TGGACGGATTGAAGGTTTAGAGAT 59.530 41.667 0.00 0.00 0.00 2.75
209 210 4.811557 GGACGGATTGAAGGTTTAGAGATG 59.188 45.833 0.00 0.00 0.00 2.90
210 211 4.192317 ACGGATTGAAGGTTTAGAGATGC 58.808 43.478 0.00 0.00 0.00 3.91
211 212 3.561725 CGGATTGAAGGTTTAGAGATGCC 59.438 47.826 0.00 0.00 0.00 4.40
212 213 4.684485 CGGATTGAAGGTTTAGAGATGCCT 60.684 45.833 0.00 0.00 0.00 4.75
213 214 5.453339 CGGATTGAAGGTTTAGAGATGCCTA 60.453 44.000 0.00 0.00 0.00 3.93
214 215 5.760743 GGATTGAAGGTTTAGAGATGCCTAC 59.239 44.000 0.00 0.00 0.00 3.18
215 216 4.386867 TGAAGGTTTAGAGATGCCTACG 57.613 45.455 0.00 0.00 0.00 3.51
216 217 3.132289 TGAAGGTTTAGAGATGCCTACGG 59.868 47.826 0.00 0.00 0.00 4.02
217 218 2.748388 AGGTTTAGAGATGCCTACGGT 58.252 47.619 0.00 0.00 0.00 4.83
218 219 2.431057 AGGTTTAGAGATGCCTACGGTG 59.569 50.000 0.00 0.00 0.00 4.94
219 220 2.202566 GTTTAGAGATGCCTACGGTGC 58.797 52.381 0.00 0.00 0.00 5.01
220 221 0.384309 TTAGAGATGCCTACGGTGCG 59.616 55.000 0.00 0.00 0.00 5.34
221 222 0.464916 TAGAGATGCCTACGGTGCGA 60.465 55.000 0.00 0.00 0.00 5.10
222 223 1.109920 AGAGATGCCTACGGTGCGAT 61.110 55.000 0.00 0.00 0.00 4.58
223 224 0.596577 GAGATGCCTACGGTGCGATA 59.403 55.000 0.00 0.00 0.00 2.92
224 225 0.598562 AGATGCCTACGGTGCGATAG 59.401 55.000 0.00 0.00 0.00 2.08
225 226 0.596577 GATGCCTACGGTGCGATAGA 59.403 55.000 0.00 0.00 39.76 1.98
226 227 0.598562 ATGCCTACGGTGCGATAGAG 59.401 55.000 0.00 0.00 39.76 2.43
227 228 0.750546 TGCCTACGGTGCGATAGAGT 60.751 55.000 0.00 0.00 39.76 3.24
228 229 0.317938 GCCTACGGTGCGATAGAGTG 60.318 60.000 0.00 0.00 39.76 3.51
229 230 1.022735 CCTACGGTGCGATAGAGTGT 58.977 55.000 0.00 0.00 39.76 3.55
230 231 1.404391 CCTACGGTGCGATAGAGTGTT 59.596 52.381 0.00 0.00 39.76 3.32
231 232 2.615447 CCTACGGTGCGATAGAGTGTTA 59.385 50.000 0.00 0.00 39.76 2.41
232 233 3.252701 CCTACGGTGCGATAGAGTGTTAT 59.747 47.826 0.00 0.00 39.76 1.89
233 234 4.453478 CCTACGGTGCGATAGAGTGTTATA 59.547 45.833 0.00 0.00 39.76 0.98
234 235 4.485024 ACGGTGCGATAGAGTGTTATAG 57.515 45.455 0.00 0.00 39.76 1.31
235 236 3.881688 ACGGTGCGATAGAGTGTTATAGT 59.118 43.478 0.00 0.00 39.76 2.12
236 237 4.337555 ACGGTGCGATAGAGTGTTATAGTT 59.662 41.667 0.00 0.00 39.76 2.24
237 238 4.675565 CGGTGCGATAGAGTGTTATAGTTG 59.324 45.833 0.00 0.00 39.76 3.16
238 239 5.589192 GGTGCGATAGAGTGTTATAGTTGT 58.411 41.667 0.00 0.00 39.76 3.32
239 240 5.459107 GGTGCGATAGAGTGTTATAGTTGTG 59.541 44.000 0.00 0.00 39.76 3.33
240 241 5.041287 TGCGATAGAGTGTTATAGTTGTGC 58.959 41.667 0.00 0.00 39.76 4.57
241 242 5.163550 TGCGATAGAGTGTTATAGTTGTGCT 60.164 40.000 0.00 0.00 39.76 4.40
242 243 5.174035 GCGATAGAGTGTTATAGTTGTGCTG 59.826 44.000 0.00 0.00 39.76 4.41
243 244 6.266323 CGATAGAGTGTTATAGTTGTGCTGT 58.734 40.000 0.00 0.00 39.76 4.40
244 245 6.197282 CGATAGAGTGTTATAGTTGTGCTGTG 59.803 42.308 0.00 0.00 39.76 3.66
245 246 5.468540 AGAGTGTTATAGTTGTGCTGTGA 57.531 39.130 0.00 0.00 0.00 3.58
246 247 5.473931 AGAGTGTTATAGTTGTGCTGTGAG 58.526 41.667 0.00 0.00 0.00 3.51
247 248 3.997021 AGTGTTATAGTTGTGCTGTGAGC 59.003 43.478 0.00 0.00 42.82 4.26
259 260 1.888215 CTGTGAGCAGCAGGAAAAGA 58.112 50.000 0.00 0.00 35.77 2.52
260 261 1.805345 CTGTGAGCAGCAGGAAAAGAG 59.195 52.381 0.00 0.00 35.77 2.85
261 262 1.417517 TGTGAGCAGCAGGAAAAGAGA 59.582 47.619 0.00 0.00 0.00 3.10
262 263 2.075338 GTGAGCAGCAGGAAAAGAGAG 58.925 52.381 0.00 0.00 0.00 3.20
263 264 1.973515 TGAGCAGCAGGAAAAGAGAGA 59.026 47.619 0.00 0.00 0.00 3.10
264 265 2.369860 TGAGCAGCAGGAAAAGAGAGAA 59.630 45.455 0.00 0.00 0.00 2.87
265 266 3.181451 TGAGCAGCAGGAAAAGAGAGAAA 60.181 43.478 0.00 0.00 0.00 2.52
266 267 3.410508 AGCAGCAGGAAAAGAGAGAAAG 58.589 45.455 0.00 0.00 0.00 2.62
267 268 3.072184 AGCAGCAGGAAAAGAGAGAAAGA 59.928 43.478 0.00 0.00 0.00 2.52
294 295 4.572389 GCGACATGAGATAAAGTGGATTGT 59.428 41.667 0.00 0.00 0.00 2.71
301 302 4.677182 AGATAAAGTGGATTGTTGGCCTT 58.323 39.130 3.32 0.00 0.00 4.35
335 336 1.287191 GCATGCGCTCGGATCTCTA 59.713 57.895 9.73 0.00 34.30 2.43
342 343 0.313672 GCTCGGATCTCTAGTGCAGG 59.686 60.000 0.00 0.00 0.00 4.85
343 344 1.974265 CTCGGATCTCTAGTGCAGGA 58.026 55.000 0.00 0.00 0.00 3.86
344 345 1.879380 CTCGGATCTCTAGTGCAGGAG 59.121 57.143 0.00 0.00 0.00 3.69
345 346 1.490910 TCGGATCTCTAGTGCAGGAGA 59.509 52.381 13.86 13.86 41.88 3.71
346 347 2.092375 TCGGATCTCTAGTGCAGGAGAA 60.092 50.000 15.00 0.58 41.16 2.87
347 348 2.890311 CGGATCTCTAGTGCAGGAGAAT 59.110 50.000 15.00 5.55 41.16 2.40
370 371 4.758674 TGAGAATCTCTTTCCACTTGCAAG 59.241 41.667 24.84 24.84 34.67 4.01
371 372 4.723309 AGAATCTCTTTCCACTTGCAAGT 58.277 39.130 26.36 26.36 34.67 3.16
372 373 5.136105 AGAATCTCTTTCCACTTGCAAGTT 58.864 37.500 29.23 11.03 33.22 2.66
373 374 4.843220 ATCTCTTTCCACTTGCAAGTTG 57.157 40.909 29.23 25.09 37.08 3.16
374 375 2.358898 TCTCTTTCCACTTGCAAGTTGC 59.641 45.455 29.23 21.17 45.29 4.17
431 432 5.126384 CCTTGGGAGTCAACAAAAACAGTAA 59.874 40.000 0.00 0.00 0.00 2.24
432 433 5.828299 TGGGAGTCAACAAAAACAGTAAG 57.172 39.130 0.00 0.00 0.00 2.34
433 434 4.642885 TGGGAGTCAACAAAAACAGTAAGG 59.357 41.667 0.00 0.00 0.00 2.69
434 435 4.037565 GGGAGTCAACAAAAACAGTAAGGG 59.962 45.833 0.00 0.00 0.00 3.95
435 436 4.499188 GGAGTCAACAAAAACAGTAAGGGC 60.499 45.833 0.00 0.00 0.00 5.19
436 437 4.278310 AGTCAACAAAAACAGTAAGGGCT 58.722 39.130 0.00 0.00 0.00 5.19
437 438 4.338400 AGTCAACAAAAACAGTAAGGGCTC 59.662 41.667 0.00 0.00 0.00 4.70
438 439 3.634910 TCAACAAAAACAGTAAGGGCTCC 59.365 43.478 0.00 0.00 0.00 4.70
439 440 3.595190 ACAAAAACAGTAAGGGCTCCT 57.405 42.857 0.00 0.00 33.87 3.69
440 441 3.910989 ACAAAAACAGTAAGGGCTCCTT 58.089 40.909 10.76 10.76 46.63 3.36
441 442 4.286707 ACAAAAACAGTAAGGGCTCCTTT 58.713 39.130 11.15 0.00 41.69 3.11
442 443 4.099419 ACAAAAACAGTAAGGGCTCCTTTG 59.901 41.667 11.15 7.65 41.69 2.77
443 444 3.876309 AAACAGTAAGGGCTCCTTTGA 57.124 42.857 11.15 0.00 41.69 2.69
444 445 4.388577 AAACAGTAAGGGCTCCTTTGAT 57.611 40.909 11.15 0.00 41.69 2.57
445 446 4.388577 AACAGTAAGGGCTCCTTTGATT 57.611 40.909 11.15 1.01 41.69 2.57
446 447 3.956744 ACAGTAAGGGCTCCTTTGATTC 58.043 45.455 11.15 0.54 41.69 2.52
447 448 3.330701 ACAGTAAGGGCTCCTTTGATTCA 59.669 43.478 11.15 0.00 41.69 2.57
448 449 4.202567 ACAGTAAGGGCTCCTTTGATTCAA 60.203 41.667 11.15 0.00 41.69 2.69
449 450 4.766891 CAGTAAGGGCTCCTTTGATTCAAA 59.233 41.667 11.19 11.19 41.69 2.69
521 522 8.737168 TCTATGTTGGTTCTTTGATTCATAGG 57.263 34.615 4.57 0.00 36.17 2.57
522 523 8.548025 TCTATGTTGGTTCTTTGATTCATAGGA 58.452 33.333 4.57 0.00 36.17 2.94
523 524 9.347240 CTATGTTGGTTCTTTGATTCATAGGAT 57.653 33.333 4.57 0.00 33.64 3.24
524 525 8.599624 ATGTTGGTTCTTTGATTCATAGGATT 57.400 30.769 4.57 0.00 0.00 3.01
525 526 7.829725 TGTTGGTTCTTTGATTCATAGGATTG 58.170 34.615 4.57 0.00 0.00 2.67
526 527 7.669304 TGTTGGTTCTTTGATTCATAGGATTGA 59.331 33.333 4.57 0.00 0.00 2.57
527 528 8.522830 GTTGGTTCTTTGATTCATAGGATTGAA 58.477 33.333 4.57 0.00 39.77 2.69
528 529 8.827832 TGGTTCTTTGATTCATAGGATTGAAT 57.172 30.769 4.57 0.00 46.39 2.57
594 595 9.958180 TTCATAGAAAATCTAACATCCACTTCA 57.042 29.630 0.00 0.00 31.96 3.02
595 596 9.958180 TCATAGAAAATCTAACATCCACTTCAA 57.042 29.630 0.00 0.00 31.96 2.69
599 600 9.171877 AGAAAATCTAACATCCACTTCAATCTC 57.828 33.333 0.00 0.00 0.00 2.75
600 601 9.171877 GAAAATCTAACATCCACTTCAATCTCT 57.828 33.333 0.00 0.00 0.00 3.10
601 602 9.525826 AAAATCTAACATCCACTTCAATCTCTT 57.474 29.630 0.00 0.00 0.00 2.85
602 603 9.525826 AAATCTAACATCCACTTCAATCTCTTT 57.474 29.630 0.00 0.00 0.00 2.52
603 604 9.525826 AATCTAACATCCACTTCAATCTCTTTT 57.474 29.630 0.00 0.00 0.00 2.27
604 605 8.924511 TCTAACATCCACTTCAATCTCTTTTT 57.075 30.769 0.00 0.00 0.00 1.94
607 608 8.463930 AACATCCACTTCAATCTCTTTTTACA 57.536 30.769 0.00 0.00 0.00 2.41
608 609 8.463930 ACATCCACTTCAATCTCTTTTTACAA 57.536 30.769 0.00 0.00 0.00 2.41
609 610 9.082313 ACATCCACTTCAATCTCTTTTTACAAT 57.918 29.630 0.00 0.00 0.00 2.71
610 611 9.918630 CATCCACTTCAATCTCTTTTTACAATT 57.081 29.630 0.00 0.00 0.00 2.32
612 613 9.965824 TCCACTTCAATCTCTTTTTACAATTTC 57.034 29.630 0.00 0.00 0.00 2.17
613 614 9.971922 CCACTTCAATCTCTTTTTACAATTTCT 57.028 29.630 0.00 0.00 0.00 2.52
628 629 6.362210 ACAATTTCTTTGTTTTCCATGTGC 57.638 33.333 0.00 0.00 46.51 4.57
629 630 5.296531 ACAATTTCTTTGTTTTCCATGTGCC 59.703 36.000 0.00 0.00 46.51 5.01
630 631 4.478206 TTTCTTTGTTTTCCATGTGCCA 57.522 36.364 0.00 0.00 0.00 4.92
631 632 4.686191 TTCTTTGTTTTCCATGTGCCAT 57.314 36.364 0.00 0.00 0.00 4.40
632 633 4.255833 TCTTTGTTTTCCATGTGCCATC 57.744 40.909 0.00 0.00 0.00 3.51
633 634 3.640498 TCTTTGTTTTCCATGTGCCATCA 59.360 39.130 0.00 0.00 0.00 3.07
634 635 4.100653 TCTTTGTTTTCCATGTGCCATCAA 59.899 37.500 0.00 0.00 0.00 2.57
635 636 4.412796 TTGTTTTCCATGTGCCATCAAA 57.587 36.364 0.00 0.00 0.00 2.69
636 637 3.726607 TGTTTTCCATGTGCCATCAAAC 58.273 40.909 0.00 0.00 0.00 2.93
637 638 3.133542 TGTTTTCCATGTGCCATCAAACA 59.866 39.130 0.00 10.00 31.84 2.83
638 639 3.383620 TTTCCATGTGCCATCAAACAC 57.616 42.857 0.00 0.00 37.31 3.32
639 640 2.291209 TCCATGTGCCATCAAACACT 57.709 45.000 0.00 0.00 37.68 3.55
640 641 2.161855 TCCATGTGCCATCAAACACTC 58.838 47.619 0.00 0.00 37.68 3.51
641 642 1.887854 CCATGTGCCATCAAACACTCA 59.112 47.619 0.00 0.00 37.68 3.41
642 643 2.494471 CCATGTGCCATCAAACACTCAT 59.506 45.455 0.00 0.00 37.68 2.90
643 644 3.056393 CCATGTGCCATCAAACACTCATT 60.056 43.478 0.00 0.00 37.68 2.57
644 645 3.646611 TGTGCCATCAAACACTCATTG 57.353 42.857 0.00 0.00 37.68 2.82
645 646 2.288334 TGTGCCATCAAACACTCATTGC 60.288 45.455 0.00 0.00 37.68 3.56
646 647 2.029649 GTGCCATCAAACACTCATTGCT 60.030 45.455 0.00 0.00 33.92 3.91
647 648 3.191162 GTGCCATCAAACACTCATTGCTA 59.809 43.478 0.00 0.00 33.92 3.49
648 649 3.825585 TGCCATCAAACACTCATTGCTAA 59.174 39.130 0.00 0.00 0.00 3.09
649 650 4.463539 TGCCATCAAACACTCATTGCTAAT 59.536 37.500 0.00 0.00 0.00 1.73
650 651 5.039333 GCCATCAAACACTCATTGCTAATC 58.961 41.667 0.00 0.00 0.00 1.75
651 652 5.585390 CCATCAAACACTCATTGCTAATCC 58.415 41.667 0.00 0.00 0.00 3.01
652 653 5.359009 CCATCAAACACTCATTGCTAATCCT 59.641 40.000 0.00 0.00 0.00 3.24
653 654 6.543465 CCATCAAACACTCATTGCTAATCCTA 59.457 38.462 0.00 0.00 0.00 2.94
654 655 7.230108 CCATCAAACACTCATTGCTAATCCTAT 59.770 37.037 0.00 0.00 0.00 2.57
655 656 9.276590 CATCAAACACTCATTGCTAATCCTATA 57.723 33.333 0.00 0.00 0.00 1.31
656 657 8.893219 TCAAACACTCATTGCTAATCCTATAG 57.107 34.615 0.00 0.00 0.00 1.31
657 658 7.933577 TCAAACACTCATTGCTAATCCTATAGG 59.066 37.037 13.07 13.07 0.00 2.57
673 674 7.233389 TCCTATAGGATTCAAGTGAGTATGC 57.767 40.000 18.00 0.00 39.78 3.14
674 675 6.211584 TCCTATAGGATTCAAGTGAGTATGCC 59.788 42.308 18.00 0.00 39.78 4.40
675 676 5.894298 ATAGGATTCAAGTGAGTATGCCA 57.106 39.130 0.00 0.00 0.00 4.92
676 677 3.878778 AGGATTCAAGTGAGTATGCCAC 58.121 45.455 0.00 0.00 34.89 5.01
677 678 3.521126 AGGATTCAAGTGAGTATGCCACT 59.479 43.478 0.00 0.00 45.88 4.00
687 688 4.899352 GAGTATGCCACTCCAATCCTAT 57.101 45.455 4.58 0.00 46.94 2.57
689 690 5.725362 GAGTATGCCACTCCAATCCTATAC 58.275 45.833 4.58 0.00 46.94 1.47
690 691 5.407049 AGTATGCCACTCCAATCCTATACT 58.593 41.667 0.00 0.00 28.33 2.12
691 692 5.846714 AGTATGCCACTCCAATCCTATACTT 59.153 40.000 0.00 0.00 28.33 2.24
692 693 5.653255 ATGCCACTCCAATCCTATACTTT 57.347 39.130 0.00 0.00 0.00 2.66
693 694 5.450818 TGCCACTCCAATCCTATACTTTT 57.549 39.130 0.00 0.00 0.00 2.27
694 695 5.437060 TGCCACTCCAATCCTATACTTTTC 58.563 41.667 0.00 0.00 0.00 2.29
695 696 4.822350 GCCACTCCAATCCTATACTTTTCC 59.178 45.833 0.00 0.00 0.00 3.13
696 697 5.398012 GCCACTCCAATCCTATACTTTTCCT 60.398 44.000 0.00 0.00 0.00 3.36
697 698 6.058183 CCACTCCAATCCTATACTTTTCCTG 58.942 44.000 0.00 0.00 0.00 3.86
698 699 6.353082 CCACTCCAATCCTATACTTTTCCTGT 60.353 42.308 0.00 0.00 0.00 4.00
699 700 7.112779 CACTCCAATCCTATACTTTTCCTGTT 58.887 38.462 0.00 0.00 0.00 3.16
700 701 7.281100 CACTCCAATCCTATACTTTTCCTGTTC 59.719 40.741 0.00 0.00 0.00 3.18
701 702 6.659824 TCCAATCCTATACTTTTCCTGTTCC 58.340 40.000 0.00 0.00 0.00 3.62
702 703 6.447084 TCCAATCCTATACTTTTCCTGTTCCT 59.553 38.462 0.00 0.00 0.00 3.36
703 704 7.626084 TCCAATCCTATACTTTTCCTGTTCCTA 59.374 37.037 0.00 0.00 0.00 2.94
704 705 7.715686 CCAATCCTATACTTTTCCTGTTCCTAC 59.284 40.741 0.00 0.00 0.00 3.18
705 706 6.461110 TCCTATACTTTTCCTGTTCCTACG 57.539 41.667 0.00 0.00 0.00 3.51
706 707 5.954150 TCCTATACTTTTCCTGTTCCTACGT 59.046 40.000 0.00 0.00 0.00 3.57
707 708 6.438425 TCCTATACTTTTCCTGTTCCTACGTT 59.562 38.462 0.00 0.00 0.00 3.99
708 709 7.038799 TCCTATACTTTTCCTGTTCCTACGTTT 60.039 37.037 0.00 0.00 0.00 3.60
709 710 7.605309 CCTATACTTTTCCTGTTCCTACGTTTT 59.395 37.037 0.00 0.00 0.00 2.43
710 711 5.746307 ACTTTTCCTGTTCCTACGTTTTC 57.254 39.130 0.00 0.00 0.00 2.29
711 712 5.187687 ACTTTTCCTGTTCCTACGTTTTCA 58.812 37.500 0.00 0.00 0.00 2.69
712 713 5.648960 ACTTTTCCTGTTCCTACGTTTTCAA 59.351 36.000 0.00 0.00 0.00 2.69
713 714 6.151480 ACTTTTCCTGTTCCTACGTTTTCAAA 59.849 34.615 0.00 0.00 0.00 2.69
714 715 6.512342 TTTCCTGTTCCTACGTTTTCAAAA 57.488 33.333 0.00 0.00 0.00 2.44
715 716 6.702716 TTCCTGTTCCTACGTTTTCAAAAT 57.297 33.333 0.00 0.00 0.00 1.82
716 717 6.308371 TCCTGTTCCTACGTTTTCAAAATC 57.692 37.500 0.00 0.00 0.00 2.17
717 718 5.239963 TCCTGTTCCTACGTTTTCAAAATCC 59.760 40.000 0.00 0.00 0.00 3.01
718 719 5.240844 CCTGTTCCTACGTTTTCAAAATCCT 59.759 40.000 0.00 0.00 0.00 3.24
719 720 6.428771 CCTGTTCCTACGTTTTCAAAATCCTA 59.571 38.462 0.00 0.00 0.00 2.94
720 721 7.193377 TGTTCCTACGTTTTCAAAATCCTAC 57.807 36.000 0.00 0.00 0.00 3.18
721 722 6.766944 TGTTCCTACGTTTTCAAAATCCTACA 59.233 34.615 0.00 0.00 0.00 2.74
722 723 7.282675 TGTTCCTACGTTTTCAAAATCCTACAA 59.717 33.333 0.00 0.00 0.00 2.41
723 724 7.804843 TCCTACGTTTTCAAAATCCTACAAA 57.195 32.000 0.00 0.00 0.00 2.83
724 725 8.398878 TCCTACGTTTTCAAAATCCTACAAAT 57.601 30.769 0.00 0.00 0.00 2.32
725 726 8.508875 TCCTACGTTTTCAAAATCCTACAAATC 58.491 33.333 0.00 0.00 0.00 2.17
726 727 8.293867 CCTACGTTTTCAAAATCCTACAAATCA 58.706 33.333 0.00 0.00 0.00 2.57
727 728 9.672086 CTACGTTTTCAAAATCCTACAAATCAA 57.328 29.630 0.00 0.00 0.00 2.57
728 729 8.934507 ACGTTTTCAAAATCCTACAAATCAAA 57.065 26.923 0.00 0.00 0.00 2.69
729 730 9.030301 ACGTTTTCAAAATCCTACAAATCAAAG 57.970 29.630 0.00 0.00 0.00 2.77
730 731 9.243637 CGTTTTCAAAATCCTACAAATCAAAGA 57.756 29.630 0.00 0.00 0.00 2.52
732 733 9.762933 TTTTCAAAATCCTACAAATCAAAGAGG 57.237 29.630 0.00 0.00 0.00 3.69
733 734 6.924111 TCAAAATCCTACAAATCAAAGAGGC 58.076 36.000 0.00 0.00 0.00 4.70
734 735 5.921962 AAATCCTACAAATCAAAGAGGCC 57.078 39.130 0.00 0.00 0.00 5.19
735 736 3.366052 TCCTACAAATCAAAGAGGCCC 57.634 47.619 0.00 0.00 0.00 5.80
792 793 4.038042 TCAAGATCGCCATAACTGGAGTAG 59.962 45.833 0.00 0.00 46.37 2.57
851 2687 5.990386 CCATCGATATCATCAGATTGGATCC 59.010 44.000 4.20 4.20 35.67 3.36
875 2711 0.184933 AGATGGAGAGAGGCGCTACT 59.815 55.000 7.64 7.01 0.00 2.57
876 2712 1.422024 AGATGGAGAGAGGCGCTACTA 59.578 52.381 7.64 0.00 0.00 1.82
877 2713 1.538075 GATGGAGAGAGGCGCTACTAC 59.462 57.143 7.64 3.16 0.00 2.73
879 2715 0.179012 GGAGAGAGGCGCTACTACCT 60.179 60.000 7.64 1.42 39.65 3.08
880 2716 1.072015 GGAGAGAGGCGCTACTACCTA 59.928 57.143 7.64 0.00 36.05 3.08
884 2720 1.064166 AGAGGCGCTACTACCTAACCA 60.064 52.381 7.64 0.00 36.05 3.67
885 2721 1.962100 GAGGCGCTACTACCTAACCAT 59.038 52.381 7.64 0.00 36.05 3.55
949 2791 3.422655 GCTCCAACTTTATTTAACCGCG 58.577 45.455 0.00 0.00 0.00 6.46
979 2821 1.336125 GCCAGCAGAATATCAGTTGCC 59.664 52.381 0.00 0.00 37.26 4.52
980 2822 1.952296 CCAGCAGAATATCAGTTGCCC 59.048 52.381 0.00 0.00 37.26 5.36
994 2839 0.960364 TTGCCCTTTCATCACGAGCC 60.960 55.000 0.00 0.00 0.00 4.70
1021 2866 3.806667 GGAGCTCCATGGCCTGCT 61.807 66.667 28.43 21.10 38.59 4.24
1170 3015 1.149101 TCCCAGGCAACCTTCTCTTT 58.851 50.000 0.00 0.00 37.17 2.52
1176 3021 1.587043 GCAACCTTCTCTTTCCCCGC 61.587 60.000 0.00 0.00 0.00 6.13
1203 3048 3.663176 TCGTTCGCGTCGGTCCTT 61.663 61.111 20.86 0.00 42.11 3.36
1407 3255 2.504244 GAGGACTTCGCCGTCGTG 60.504 66.667 4.30 0.00 34.75 4.35
2395 4279 2.665185 ACGTGAGCAAGAACCCGC 60.665 61.111 0.00 0.00 0.00 6.13
2445 4329 2.738521 CTCGGGCAGAACGTGGTG 60.739 66.667 0.00 0.00 0.00 4.17
2658 4548 0.461870 TTGATGGCGTGAATCCTCCG 60.462 55.000 0.00 0.00 0.00 4.63
2676 4566 4.994756 GGTTGGTGGGCAGTGGGG 62.995 72.222 0.00 0.00 0.00 4.96
2718 4611 4.241681 GTTCAGTCCTTAGCTCTGTCTTG 58.758 47.826 0.00 0.00 0.00 3.02
2719 4612 2.828520 TCAGTCCTTAGCTCTGTCTTGG 59.171 50.000 0.00 0.00 0.00 3.61
2772 4668 4.890088 AGCTCATTCTGTTTTACCACGTA 58.110 39.130 0.00 0.00 0.00 3.57
2776 4672 6.183360 GCTCATTCTGTTTTACCACGTAGTAC 60.183 42.308 0.00 0.00 41.61 2.73
2780 4676 6.147864 TCTGTTTTACCACGTAGTACTTGT 57.852 37.500 0.00 0.00 41.61 3.16
2782 4678 6.476380 TCTGTTTTACCACGTAGTACTTGTTG 59.524 38.462 0.00 0.00 41.61 3.33
2791 4687 6.090358 CCACGTAGTACTTGTTGGTCTTATTG 59.910 42.308 0.00 0.00 41.61 1.90
2858 4760 2.858839 GTTTGAATAAAACGGAGCGGG 58.141 47.619 0.00 0.00 38.92 6.13
2883 4785 3.694364 CCAATCATGGGAGGAGACG 57.306 57.895 0.00 0.00 43.51 4.18
2884 4786 1.123077 CCAATCATGGGAGGAGACGA 58.877 55.000 0.00 0.00 43.51 4.20
2885 4787 1.486310 CCAATCATGGGAGGAGACGAA 59.514 52.381 0.00 0.00 43.51 3.85
2886 4788 2.555199 CAATCATGGGAGGAGACGAAC 58.445 52.381 0.00 0.00 0.00 3.95
2887 4789 1.866015 ATCATGGGAGGAGACGAACA 58.134 50.000 0.00 0.00 0.00 3.18
2888 4790 1.639722 TCATGGGAGGAGACGAACAA 58.360 50.000 0.00 0.00 0.00 2.83
2889 4791 1.550524 TCATGGGAGGAGACGAACAAG 59.449 52.381 0.00 0.00 0.00 3.16
2890 4792 0.905357 ATGGGAGGAGACGAACAAGG 59.095 55.000 0.00 0.00 0.00 3.61
2891 4793 0.471211 TGGGAGGAGACGAACAAGGT 60.471 55.000 0.00 0.00 0.00 3.50
2893 4795 1.477295 GGGAGGAGACGAACAAGGTAG 59.523 57.143 0.00 0.00 0.00 3.18
2894 4796 2.444421 GGAGGAGACGAACAAGGTAGA 58.556 52.381 0.00 0.00 0.00 2.59
2895 4797 2.424246 GGAGGAGACGAACAAGGTAGAG 59.576 54.545 0.00 0.00 0.00 2.43
2896 4798 3.345414 GAGGAGACGAACAAGGTAGAGA 58.655 50.000 0.00 0.00 0.00 3.10
2897 4799 3.083293 AGGAGACGAACAAGGTAGAGAC 58.917 50.000 0.00 0.00 0.00 3.36
2899 4801 2.740981 GAGACGAACAAGGTAGAGACGA 59.259 50.000 0.00 0.00 0.00 4.20
2901 4803 1.199558 ACGAACAAGGTAGAGACGAGC 59.800 52.381 0.00 0.00 0.00 5.03
2903 4805 2.729467 CGAACAAGGTAGAGACGAGCAG 60.729 54.545 0.00 0.00 0.00 4.24
2904 4806 0.528470 ACAAGGTAGAGACGAGCAGC 59.472 55.000 0.00 0.00 0.00 5.25
2905 4807 0.528017 CAAGGTAGAGACGAGCAGCA 59.472 55.000 0.00 0.00 0.00 4.41
2906 4808 1.135915 CAAGGTAGAGACGAGCAGCAT 59.864 52.381 0.00 0.00 0.00 3.79
2908 4810 1.135915 AGGTAGAGACGAGCAGCATTG 59.864 52.381 0.00 0.00 0.00 2.82
2922 4824 4.151582 ATTGCCAATGCCAGCGCC 62.152 61.111 2.29 0.00 36.33 6.53
2925 4827 4.884257 GCCAATGCCAGCGCCATG 62.884 66.667 2.29 0.00 0.00 3.66
2927 4829 3.454573 CAATGCCAGCGCCATGGT 61.455 61.111 14.67 0.00 42.75 3.55
2929 4831 3.009192 AATGCCAGCGCCATGGTTG 62.009 57.895 14.67 7.72 42.75 3.77
2948 4850 4.100084 CGACCTGCAGGCCATGGA 62.100 66.667 33.06 0.21 39.32 3.41
2950 4852 4.437587 ACCTGCAGGCCATGGAGC 62.438 66.667 33.06 16.31 45.53 4.70
2952 4854 2.516460 CTGCAGGCCATGGAGCTC 60.516 66.667 18.40 4.71 40.79 4.09
2953 4855 4.119363 TGCAGGCCATGGAGCTCC 62.119 66.667 26.78 26.78 0.00 4.70
2957 4859 4.575973 GGCCATGGAGCTCCGCAT 62.576 66.667 27.43 13.94 39.43 4.73
2958 4860 3.285215 GCCATGGAGCTCCGCATG 61.285 66.667 27.43 23.86 39.43 4.06
2963 4865 2.124983 GGAGCTCCGCATGCTTGA 60.125 61.111 19.06 11.17 41.30 3.02
2967 4869 2.821688 GCTCCGCATGCTTGAGCTC 61.822 63.158 33.97 17.94 46.19 4.09
2968 4870 2.510012 TCCGCATGCTTGAGCTCG 60.510 61.111 17.13 0.00 42.66 5.03
2969 4871 2.816958 CCGCATGCTTGAGCTCGT 60.817 61.111 17.13 0.00 42.66 4.18
2970 4872 2.398429 CGCATGCTTGAGCTCGTG 59.602 61.111 17.13 5.30 42.66 4.35
2972 4874 1.426816 CGCATGCTTGAGCTCGTGAT 61.427 55.000 17.13 0.00 42.66 3.06
2976 4878 1.718396 TGCTTGAGCTCGTGATGAAG 58.282 50.000 9.64 7.04 42.66 3.02
2977 4879 1.001293 TGCTTGAGCTCGTGATGAAGT 59.999 47.619 9.64 0.00 42.66 3.01
2978 4880 1.392853 GCTTGAGCTCGTGATGAAGTG 59.607 52.381 9.64 0.00 38.21 3.16
2979 4881 1.392853 CTTGAGCTCGTGATGAAGTGC 59.607 52.381 9.64 0.00 0.00 4.40
2981 4883 1.270252 TGAGCTCGTGATGAAGTGCAA 60.270 47.619 9.64 0.00 0.00 4.08
2982 4884 1.127582 GAGCTCGTGATGAAGTGCAAC 59.872 52.381 0.00 0.00 0.00 4.17
2997 4899 2.925563 GTGCAACTGATATTTTGCTGGC 59.074 45.455 14.92 0.00 46.83 4.85
2998 4900 2.094078 TGCAACTGATATTTTGCTGGCC 60.094 45.455 14.92 0.00 46.83 5.36
2999 4901 2.167075 GCAACTGATATTTTGCTGGCCT 59.833 45.455 3.32 0.00 43.96 5.19
3000 4902 3.736126 GCAACTGATATTTTGCTGGCCTC 60.736 47.826 3.32 0.00 43.96 4.70
3001 4903 2.292267 ACTGATATTTTGCTGGCCTCG 58.708 47.619 3.32 0.00 0.00 4.63
3002 4904 1.002033 CTGATATTTTGCTGGCCTCGC 60.002 52.381 3.32 7.56 0.00 5.03
3003 4905 1.024271 GATATTTTGCTGGCCTCGCA 58.976 50.000 14.99 14.99 35.22 5.10
3004 4906 1.405105 GATATTTTGCTGGCCTCGCAA 59.595 47.619 23.30 23.30 44.83 4.85
3005 4907 0.525761 TATTTTGCTGGCCTCGCAAC 59.474 50.000 25.78 2.09 46.01 4.17
3006 4908 2.476534 ATTTTGCTGGCCTCGCAACG 62.477 55.000 25.78 0.00 46.01 4.10
3007 4909 4.927782 TTGCTGGCCTCGCAACGT 62.928 61.111 23.30 0.00 41.97 3.99
3022 4924 4.402473 GCAACGTGCGATAAAATAAAGC 57.598 40.909 0.00 0.00 31.71 3.51
3023 4925 4.095610 GCAACGTGCGATAAAATAAAGCT 58.904 39.130 0.00 0.00 31.71 3.74
3024 4926 4.028509 GCAACGTGCGATAAAATAAAGCTG 60.029 41.667 0.00 0.00 31.71 4.24
3025 4927 4.273005 ACGTGCGATAAAATAAAGCTGG 57.727 40.909 0.00 0.00 0.00 4.85
3026 4928 3.936453 ACGTGCGATAAAATAAAGCTGGA 59.064 39.130 0.00 0.00 0.00 3.86
3027 4929 4.034048 ACGTGCGATAAAATAAAGCTGGAG 59.966 41.667 0.00 0.00 0.00 3.86
3028 4930 4.282873 GTGCGATAAAATAAAGCTGGAGC 58.717 43.478 0.00 0.00 42.49 4.70
3055 4957 1.053424 TTAGAGCAACTCCAACGGGT 58.947 50.000 0.00 0.00 34.93 5.28
3142 5044 2.725811 TGCTTTCGCATTTGGGTCA 58.274 47.368 0.00 0.00 42.25 4.02
3149 5052 2.395360 GCATTTGGGTCAGCGCGTA 61.395 57.895 8.43 0.00 0.00 4.42
3182 5086 1.882352 GCCTGAGACCCATTTTGACGT 60.882 52.381 0.00 0.00 0.00 4.34
3293 5393 7.799447 CACACATCCACATTTGCATTTAAAAAG 59.201 33.333 0.00 0.00 0.00 2.27
3383 5556 2.434185 GGTTGATGAGCGTCGGCA 60.434 61.111 0.00 0.00 43.41 5.69
3631 5834 4.467084 GGCGTCGCTCCCATCCAA 62.467 66.667 18.11 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 5.526846 GCAAAACCATGGTTCTGATGAAAAA 59.473 36.000 30.91 0.00 37.35 1.94
28 29 5.055812 GCAAAACCATGGTTCTGATGAAAA 58.944 37.500 30.91 0.00 37.35 2.29
29 30 4.344679 AGCAAAACCATGGTTCTGATGAAA 59.655 37.500 30.91 0.00 37.35 2.69
30 31 3.896888 AGCAAAACCATGGTTCTGATGAA 59.103 39.130 30.91 0.00 37.35 2.57
31 32 3.499338 AGCAAAACCATGGTTCTGATGA 58.501 40.909 30.91 0.00 37.35 2.92
32 33 3.947910 AGCAAAACCATGGTTCTGATG 57.052 42.857 30.91 24.65 37.35 3.07
42 43 3.094572 CCTCTCATGGAAGCAAAACCAT 58.905 45.455 0.00 0.00 46.22 3.55
43 44 2.517959 CCTCTCATGGAAGCAAAACCA 58.482 47.619 0.00 0.00 40.57 3.67
44 45 1.203287 GCCTCTCATGGAAGCAAAACC 59.797 52.381 0.00 0.00 32.03 3.27
45 46 1.888512 TGCCTCTCATGGAAGCAAAAC 59.111 47.619 5.35 0.00 38.32 2.43
46 47 1.888512 GTGCCTCTCATGGAAGCAAAA 59.111 47.619 8.48 0.00 42.24 2.44
47 48 1.538047 GTGCCTCTCATGGAAGCAAA 58.462 50.000 8.48 0.00 42.24 3.68
48 49 0.674581 CGTGCCTCTCATGGAAGCAA 60.675 55.000 8.48 0.00 42.24 3.91
49 50 1.078918 CGTGCCTCTCATGGAAGCA 60.079 57.895 4.06 4.06 38.87 3.91
50 51 3.805267 CGTGCCTCTCATGGAAGC 58.195 61.111 0.00 0.00 32.35 3.86
55 56 2.699954 AGTAAAACCGTGCCTCTCATG 58.300 47.619 0.00 0.00 0.00 3.07
56 57 3.418684 AAGTAAAACCGTGCCTCTCAT 57.581 42.857 0.00 0.00 0.00 2.90
57 58 2.922740 AAGTAAAACCGTGCCTCTCA 57.077 45.000 0.00 0.00 0.00 3.27
58 59 3.059120 GTGAAAGTAAAACCGTGCCTCTC 60.059 47.826 0.00 0.00 0.00 3.20
59 60 2.876550 GTGAAAGTAAAACCGTGCCTCT 59.123 45.455 0.00 0.00 0.00 3.69
60 61 2.349155 CGTGAAAGTAAAACCGTGCCTC 60.349 50.000 0.00 0.00 0.00 4.70
61 62 1.600485 CGTGAAAGTAAAACCGTGCCT 59.400 47.619 0.00 0.00 0.00 4.75
62 63 1.598601 TCGTGAAAGTAAAACCGTGCC 59.401 47.619 0.00 0.00 0.00 5.01
63 64 2.540931 TCTCGTGAAAGTAAAACCGTGC 59.459 45.455 0.00 0.00 0.00 5.34
64 65 3.800506 ACTCTCGTGAAAGTAAAACCGTG 59.199 43.478 0.00 0.00 0.00 4.94
65 66 4.047142 GACTCTCGTGAAAGTAAAACCGT 58.953 43.478 0.00 0.00 0.00 4.83
66 67 4.046462 TGACTCTCGTGAAAGTAAAACCG 58.954 43.478 0.00 0.00 0.00 4.44
67 68 4.085210 CGTGACTCTCGTGAAAGTAAAACC 60.085 45.833 0.00 0.00 0.00 3.27
68 69 4.085210 CCGTGACTCTCGTGAAAGTAAAAC 60.085 45.833 0.24 0.00 0.00 2.43
69 70 4.046462 CCGTGACTCTCGTGAAAGTAAAA 58.954 43.478 0.24 0.00 0.00 1.52
70 71 3.067180 ACCGTGACTCTCGTGAAAGTAAA 59.933 43.478 0.24 0.00 0.00 2.01
71 72 2.620115 ACCGTGACTCTCGTGAAAGTAA 59.380 45.455 0.24 0.00 0.00 2.24
72 73 2.224606 ACCGTGACTCTCGTGAAAGTA 58.775 47.619 0.24 0.00 0.00 2.24
73 74 1.001597 GACCGTGACTCTCGTGAAAGT 60.002 52.381 0.24 0.00 0.00 2.66
74 75 1.687628 GACCGTGACTCTCGTGAAAG 58.312 55.000 0.24 0.00 0.00 2.62
75 76 0.040692 CGACCGTGACTCTCGTGAAA 60.041 55.000 0.24 0.00 0.00 2.69
76 77 1.162181 ACGACCGTGACTCTCGTGAA 61.162 55.000 3.98 0.00 39.14 3.18
77 78 1.596203 ACGACCGTGACTCTCGTGA 60.596 57.895 3.98 0.00 39.14 4.35
78 79 2.944429 ACGACCGTGACTCTCGTG 59.056 61.111 3.98 0.00 39.14 4.35
87 88 0.878523 TTTCAAGAGGCACGACCGTG 60.879 55.000 17.19 17.19 46.52 4.94
88 89 0.179067 TTTTCAAGAGGCACGACCGT 60.179 50.000 0.00 0.00 46.52 4.83
89 90 0.234884 GTTTTCAAGAGGCACGACCG 59.765 55.000 0.00 0.00 46.52 4.79
90 91 1.305201 TGTTTTCAAGAGGCACGACC 58.695 50.000 0.00 0.00 39.61 4.79
91 92 3.414549 TTTGTTTTCAAGAGGCACGAC 57.585 42.857 0.00 0.00 41.09 4.34
92 93 4.442375 TTTTTGTTTTCAAGAGGCACGA 57.558 36.364 0.00 0.00 41.09 4.35
110 111 6.070656 TCTGTCCATCCAGATGTTTCTTTTT 58.929 36.000 6.87 0.00 36.57 1.94
111 112 5.634118 TCTGTCCATCCAGATGTTTCTTTT 58.366 37.500 6.87 0.00 36.57 2.27
112 113 5.246981 TCTGTCCATCCAGATGTTTCTTT 57.753 39.130 6.87 0.00 36.57 2.52
113 114 4.916041 TCTGTCCATCCAGATGTTTCTT 57.084 40.909 6.87 0.00 36.57 2.52
121 122 4.219115 GGTTCTCTATCTGTCCATCCAGA 58.781 47.826 0.00 0.00 45.06 3.86
122 123 3.963374 TGGTTCTCTATCTGTCCATCCAG 59.037 47.826 0.00 0.00 0.00 3.86
123 124 3.994317 TGGTTCTCTATCTGTCCATCCA 58.006 45.455 0.00 0.00 0.00 3.41
124 125 4.346418 ACATGGTTCTCTATCTGTCCATCC 59.654 45.833 0.00 0.00 34.07 3.51
125 126 5.543507 ACATGGTTCTCTATCTGTCCATC 57.456 43.478 0.00 0.00 34.07 3.51
126 127 5.011533 GCTACATGGTTCTCTATCTGTCCAT 59.988 44.000 0.00 0.00 36.30 3.41
127 128 4.342378 GCTACATGGTTCTCTATCTGTCCA 59.658 45.833 0.00 0.00 0.00 4.02
128 129 4.342378 TGCTACATGGTTCTCTATCTGTCC 59.658 45.833 0.00 0.00 0.00 4.02
129 130 5.521906 TGCTACATGGTTCTCTATCTGTC 57.478 43.478 0.00 0.00 0.00 3.51
130 131 5.600069 TCATGCTACATGGTTCTCTATCTGT 59.400 40.000 7.66 0.00 0.00 3.41
131 132 5.925397 GTCATGCTACATGGTTCTCTATCTG 59.075 44.000 7.66 0.00 0.00 2.90
132 133 5.600069 TGTCATGCTACATGGTTCTCTATCT 59.400 40.000 7.66 0.00 0.00 1.98
133 134 5.847304 TGTCATGCTACATGGTTCTCTATC 58.153 41.667 7.66 0.00 0.00 2.08
134 135 5.876651 TGTCATGCTACATGGTTCTCTAT 57.123 39.130 7.66 0.00 0.00 1.98
135 136 5.675684 TTGTCATGCTACATGGTTCTCTA 57.324 39.130 7.66 0.00 0.00 2.43
136 137 4.558226 TTGTCATGCTACATGGTTCTCT 57.442 40.909 7.66 0.00 0.00 3.10
137 138 5.182001 AGTTTTGTCATGCTACATGGTTCTC 59.818 40.000 7.66 0.00 0.00 2.87
138 139 5.072741 AGTTTTGTCATGCTACATGGTTCT 58.927 37.500 7.66 0.00 0.00 3.01
139 140 5.376854 AGTTTTGTCATGCTACATGGTTC 57.623 39.130 7.66 0.94 0.00 3.62
140 141 4.083324 CGAGTTTTGTCATGCTACATGGTT 60.083 41.667 7.66 0.00 0.00 3.67
141 142 3.436704 CGAGTTTTGTCATGCTACATGGT 59.563 43.478 7.66 0.00 0.00 3.55
142 143 3.436704 ACGAGTTTTGTCATGCTACATGG 59.563 43.478 7.66 0.00 0.00 3.66
143 144 4.083855 ACACGAGTTTTGTCATGCTACATG 60.084 41.667 1.05 1.05 0.00 3.21
144 145 4.065088 ACACGAGTTTTGTCATGCTACAT 58.935 39.130 0.00 0.00 0.00 2.29
145 146 3.462982 ACACGAGTTTTGTCATGCTACA 58.537 40.909 0.00 0.00 0.00 2.74
146 147 3.120649 GGACACGAGTTTTGTCATGCTAC 60.121 47.826 5.60 0.00 44.47 3.58
147 148 3.064207 GGACACGAGTTTTGTCATGCTA 58.936 45.455 5.60 0.00 44.47 3.49
148 149 1.873591 GGACACGAGTTTTGTCATGCT 59.126 47.619 5.60 0.00 44.47 3.79
149 150 1.398451 CGGACACGAGTTTTGTCATGC 60.398 52.381 5.60 0.00 44.47 4.06
150 151 1.398451 GCGGACACGAGTTTTGTCATG 60.398 52.381 5.60 0.00 44.47 3.07
151 152 0.865769 GCGGACACGAGTTTTGTCAT 59.134 50.000 5.60 0.00 44.47 3.06
152 153 1.155424 GGCGGACACGAGTTTTGTCA 61.155 55.000 5.60 0.00 44.47 3.58
153 154 1.568025 GGCGGACACGAGTTTTGTC 59.432 57.895 0.00 0.00 44.60 3.18
154 155 2.241880 CGGCGGACACGAGTTTTGT 61.242 57.895 0.00 0.00 44.60 2.83
155 156 2.154427 GACGGCGGACACGAGTTTTG 62.154 60.000 13.24 0.00 44.60 2.44
156 157 1.952635 GACGGCGGACACGAGTTTT 60.953 57.895 13.24 0.00 44.60 2.43
157 158 1.518056 TAGACGGCGGACACGAGTTT 61.518 55.000 13.24 0.00 44.60 2.66
158 159 1.919956 CTAGACGGCGGACACGAGTT 61.920 60.000 13.24 0.00 44.60 3.01
159 160 2.359107 TAGACGGCGGACACGAGT 60.359 61.111 13.24 0.00 44.60 4.18
160 161 2.104859 TCTAGACGGCGGACACGAG 61.105 63.158 13.24 5.71 44.60 4.18
161 162 2.046988 TCTAGACGGCGGACACGA 60.047 61.111 13.24 2.95 44.60 4.35
162 163 2.099831 GTCTAGACGGCGGACACG 59.900 66.667 13.24 0.53 44.63 4.49
163 164 1.136984 CTGTCTAGACGGCGGACAC 59.863 63.158 18.57 0.55 36.25 3.67
164 165 1.002990 TCTGTCTAGACGGCGGACA 60.003 57.895 24.50 16.77 37.60 4.02
165 166 1.428620 GTCTGTCTAGACGGCGGAC 59.571 63.158 24.50 19.75 43.49 4.79
166 167 3.900855 GTCTGTCTAGACGGCGGA 58.099 61.111 24.50 13.53 43.49 5.54
173 174 0.322648 TCCGTCCACGTCTGTCTAGA 59.677 55.000 0.00 0.00 37.74 2.43
174 175 1.380524 ATCCGTCCACGTCTGTCTAG 58.619 55.000 0.00 0.00 37.74 2.43
175 176 1.471287 CAATCCGTCCACGTCTGTCTA 59.529 52.381 0.00 0.00 37.74 2.59
176 177 0.243907 CAATCCGTCCACGTCTGTCT 59.756 55.000 0.00 0.00 37.74 3.41
177 178 0.242825 TCAATCCGTCCACGTCTGTC 59.757 55.000 0.00 0.00 37.74 3.51
178 179 0.677288 TTCAATCCGTCCACGTCTGT 59.323 50.000 0.00 0.00 37.74 3.41
179 180 1.350193 CTTCAATCCGTCCACGTCTG 58.650 55.000 0.00 0.00 37.74 3.51
180 181 0.246635 CCTTCAATCCGTCCACGTCT 59.753 55.000 0.00 0.00 37.74 4.18
181 182 0.037605 ACCTTCAATCCGTCCACGTC 60.038 55.000 0.00 0.00 37.74 4.34
182 183 0.395312 AACCTTCAATCCGTCCACGT 59.605 50.000 0.00 0.00 37.74 4.49
183 184 1.519408 AAACCTTCAATCCGTCCACG 58.481 50.000 0.00 0.00 39.44 4.94
184 185 3.933332 CTCTAAACCTTCAATCCGTCCAC 59.067 47.826 0.00 0.00 0.00 4.02
185 186 3.835978 TCTCTAAACCTTCAATCCGTCCA 59.164 43.478 0.00 0.00 0.00 4.02
186 187 4.467198 TCTCTAAACCTTCAATCCGTCC 57.533 45.455 0.00 0.00 0.00 4.79
187 188 4.271291 GCATCTCTAAACCTTCAATCCGTC 59.729 45.833 0.00 0.00 0.00 4.79
188 189 4.192317 GCATCTCTAAACCTTCAATCCGT 58.808 43.478 0.00 0.00 0.00 4.69
189 190 3.561725 GGCATCTCTAAACCTTCAATCCG 59.438 47.826 0.00 0.00 0.00 4.18
190 191 4.786425 AGGCATCTCTAAACCTTCAATCC 58.214 43.478 0.00 0.00 0.00 3.01
191 192 5.463724 CGTAGGCATCTCTAAACCTTCAATC 59.536 44.000 0.00 0.00 33.60 2.67
192 193 5.360591 CGTAGGCATCTCTAAACCTTCAAT 58.639 41.667 0.00 0.00 33.60 2.57
193 194 4.382685 CCGTAGGCATCTCTAAACCTTCAA 60.383 45.833 0.00 0.00 46.14 2.69
194 195 3.132289 CCGTAGGCATCTCTAAACCTTCA 59.868 47.826 0.00 0.00 46.14 3.02
195 196 3.718815 CCGTAGGCATCTCTAAACCTTC 58.281 50.000 0.00 0.00 46.14 3.46
196 197 3.821421 CCGTAGGCATCTCTAAACCTT 57.179 47.619 0.00 0.00 46.14 3.50
211 212 2.846039 AACACTCTATCGCACCGTAG 57.154 50.000 0.00 0.00 0.00 3.51
212 213 5.059161 ACTATAACACTCTATCGCACCGTA 58.941 41.667 0.00 0.00 0.00 4.02
213 214 3.881688 ACTATAACACTCTATCGCACCGT 59.118 43.478 0.00 0.00 0.00 4.83
214 215 4.485024 ACTATAACACTCTATCGCACCG 57.515 45.455 0.00 0.00 0.00 4.94
215 216 5.459107 CACAACTATAACACTCTATCGCACC 59.541 44.000 0.00 0.00 0.00 5.01
216 217 5.051641 GCACAACTATAACACTCTATCGCAC 60.052 44.000 0.00 0.00 0.00 5.34
217 218 5.041287 GCACAACTATAACACTCTATCGCA 58.959 41.667 0.00 0.00 0.00 5.10
218 219 5.174035 CAGCACAACTATAACACTCTATCGC 59.826 44.000 0.00 0.00 0.00 4.58
219 220 6.197282 CACAGCACAACTATAACACTCTATCG 59.803 42.308 0.00 0.00 0.00 2.92
220 221 7.258441 TCACAGCACAACTATAACACTCTATC 58.742 38.462 0.00 0.00 0.00 2.08
221 222 7.170393 TCACAGCACAACTATAACACTCTAT 57.830 36.000 0.00 0.00 0.00 1.98
222 223 6.584185 TCACAGCACAACTATAACACTCTA 57.416 37.500 0.00 0.00 0.00 2.43
223 224 5.468540 TCACAGCACAACTATAACACTCT 57.531 39.130 0.00 0.00 0.00 3.24
224 225 4.092091 GCTCACAGCACAACTATAACACTC 59.908 45.833 0.00 0.00 41.89 3.51
225 226 3.997021 GCTCACAGCACAACTATAACACT 59.003 43.478 0.00 0.00 41.89 3.55
226 227 4.327854 GCTCACAGCACAACTATAACAC 57.672 45.455 0.00 0.00 41.89 3.32
241 242 1.417517 TCTCTTTTCCTGCTGCTCACA 59.582 47.619 0.00 0.00 0.00 3.58
242 243 2.075338 CTCTCTTTTCCTGCTGCTCAC 58.925 52.381 0.00 0.00 0.00 3.51
243 244 1.973515 TCTCTCTTTTCCTGCTGCTCA 59.026 47.619 0.00 0.00 0.00 4.26
244 245 2.758736 TCTCTCTTTTCCTGCTGCTC 57.241 50.000 0.00 0.00 0.00 4.26
245 246 3.072184 TCTTTCTCTCTTTTCCTGCTGCT 59.928 43.478 0.00 0.00 0.00 4.24
246 247 3.406764 TCTTTCTCTCTTTTCCTGCTGC 58.593 45.455 0.00 0.00 0.00 5.25
247 248 4.002316 CCTCTTTCTCTCTTTTCCTGCTG 58.998 47.826 0.00 0.00 0.00 4.41
248 249 3.906846 TCCTCTTTCTCTCTTTTCCTGCT 59.093 43.478 0.00 0.00 0.00 4.24
249 250 4.252878 CTCCTCTTTCTCTCTTTTCCTGC 58.747 47.826 0.00 0.00 0.00 4.85
250 251 4.252878 GCTCCTCTTTCTCTCTTTTCCTG 58.747 47.826 0.00 0.00 0.00 3.86
251 252 3.056179 CGCTCCTCTTTCTCTCTTTTCCT 60.056 47.826 0.00 0.00 0.00 3.36
252 253 3.056465 TCGCTCCTCTTTCTCTCTTTTCC 60.056 47.826 0.00 0.00 0.00 3.13
253 254 3.924073 GTCGCTCCTCTTTCTCTCTTTTC 59.076 47.826 0.00 0.00 0.00 2.29
254 255 3.322254 TGTCGCTCCTCTTTCTCTCTTTT 59.678 43.478 0.00 0.00 0.00 2.27
255 256 2.894126 TGTCGCTCCTCTTTCTCTCTTT 59.106 45.455 0.00 0.00 0.00 2.52
256 257 2.520069 TGTCGCTCCTCTTTCTCTCTT 58.480 47.619 0.00 0.00 0.00 2.85
257 258 2.208132 TGTCGCTCCTCTTTCTCTCT 57.792 50.000 0.00 0.00 0.00 3.10
258 259 2.425312 TCATGTCGCTCCTCTTTCTCTC 59.575 50.000 0.00 0.00 0.00 3.20
259 260 2.426738 CTCATGTCGCTCCTCTTTCTCT 59.573 50.000 0.00 0.00 0.00 3.10
260 261 2.425312 TCTCATGTCGCTCCTCTTTCTC 59.575 50.000 0.00 0.00 0.00 2.87
261 262 2.451490 TCTCATGTCGCTCCTCTTTCT 58.549 47.619 0.00 0.00 0.00 2.52
262 263 2.949451 TCTCATGTCGCTCCTCTTTC 57.051 50.000 0.00 0.00 0.00 2.62
263 264 5.105146 ACTTTATCTCATGTCGCTCCTCTTT 60.105 40.000 0.00 0.00 0.00 2.52
264 265 4.404073 ACTTTATCTCATGTCGCTCCTCTT 59.596 41.667 0.00 0.00 0.00 2.85
265 266 3.957497 ACTTTATCTCATGTCGCTCCTCT 59.043 43.478 0.00 0.00 0.00 3.69
266 267 4.047822 CACTTTATCTCATGTCGCTCCTC 58.952 47.826 0.00 0.00 0.00 3.71
267 268 3.181471 CCACTTTATCTCATGTCGCTCCT 60.181 47.826 0.00 0.00 0.00 3.69
294 295 2.992124 TATAGCAGCGTAAAGGCCAA 57.008 45.000 5.01 0.00 0.00 4.52
301 302 3.363871 CGCATGCAAATATAGCAGCGTAA 60.364 43.478 19.57 0.95 46.36 3.18
335 336 4.032310 AGAGATTCTCATTCTCCTGCACT 58.968 43.478 15.83 0.00 40.43 4.40
342 343 6.183360 GCAAGTGGAAAGAGATTCTCATTCTC 60.183 42.308 23.54 18.17 38.01 2.87
343 344 5.647225 GCAAGTGGAAAGAGATTCTCATTCT 59.353 40.000 23.54 8.25 38.01 2.40
344 345 5.413833 TGCAAGTGGAAAGAGATTCTCATTC 59.586 40.000 18.83 18.83 37.44 2.67
345 346 5.319453 TGCAAGTGGAAAGAGATTCTCATT 58.681 37.500 15.83 10.01 38.18 2.57
346 347 4.914983 TGCAAGTGGAAAGAGATTCTCAT 58.085 39.130 15.83 0.66 38.18 2.90
347 348 4.356405 TGCAAGTGGAAAGAGATTCTCA 57.644 40.909 15.83 0.00 38.18 3.27
370 371 2.111041 GTGAGCTTCACAGTTGCAAC 57.889 50.000 22.17 22.17 46.22 4.17
381 382 1.340657 CTCGTGCGTCAGTGAGCTTC 61.341 60.000 13.40 7.64 0.00 3.86
390 391 4.994201 GTCGTGCCTCGTGCGTCA 62.994 66.667 0.00 0.00 45.60 4.35
409 410 5.126384 CCTTACTGTTTTTGTTGACTCCCAA 59.874 40.000 0.00 0.00 0.00 4.12
410 411 4.642885 CCTTACTGTTTTTGTTGACTCCCA 59.357 41.667 0.00 0.00 0.00 4.37
412 413 4.499188 GCCCTTACTGTTTTTGTTGACTCC 60.499 45.833 0.00 0.00 0.00 3.85
495 496 9.177608 CCTATGAATCAAAGAACCAACATAGAA 57.822 33.333 0.00 0.00 38.53 2.10
496 497 8.548025 TCCTATGAATCAAAGAACCAACATAGA 58.452 33.333 0.00 0.00 38.53 1.98
497 498 8.737168 TCCTATGAATCAAAGAACCAACATAG 57.263 34.615 0.00 0.00 37.06 2.23
498 499 9.699410 AATCCTATGAATCAAAGAACCAACATA 57.301 29.630 0.00 0.00 0.00 2.29
499 500 8.472413 CAATCCTATGAATCAAAGAACCAACAT 58.528 33.333 0.00 0.00 0.00 2.71
500 501 7.669304 TCAATCCTATGAATCAAAGAACCAACA 59.331 33.333 0.00 0.00 0.00 3.33
501 502 8.055279 TCAATCCTATGAATCAAAGAACCAAC 57.945 34.615 0.00 0.00 0.00 3.77
502 503 8.648698 TTCAATCCTATGAATCAAAGAACCAA 57.351 30.769 0.00 0.00 34.50 3.67
503 504 8.827832 ATTCAATCCTATGAATCAAAGAACCA 57.172 30.769 0.00 0.00 44.64 3.67
521 522 8.917088 TGAGAAAAATTCCTATGGGATTCAATC 58.083 33.333 10.68 0.00 41.87 2.67
522 523 8.843308 TGAGAAAAATTCCTATGGGATTCAAT 57.157 30.769 10.68 0.00 41.87 2.57
523 524 8.843308 ATGAGAAAAATTCCTATGGGATTCAA 57.157 30.769 10.68 1.23 41.87 2.69
524 525 9.934784 TTATGAGAAAAATTCCTATGGGATTCA 57.065 29.630 10.68 3.09 41.87 2.57
568 569 9.958180 TGAAGTGGATGTTAGATTTTCTATGAA 57.042 29.630 0.00 0.00 0.00 2.57
569 570 9.958180 TTGAAGTGGATGTTAGATTTTCTATGA 57.042 29.630 0.00 0.00 0.00 2.15
573 574 9.171877 GAGATTGAAGTGGATGTTAGATTTTCT 57.828 33.333 0.00 0.00 0.00 2.52
574 575 9.171877 AGAGATTGAAGTGGATGTTAGATTTTC 57.828 33.333 0.00 0.00 0.00 2.29
575 576 9.525826 AAGAGATTGAAGTGGATGTTAGATTTT 57.474 29.630 0.00 0.00 0.00 1.82
576 577 9.525826 AAAGAGATTGAAGTGGATGTTAGATTT 57.474 29.630 0.00 0.00 0.00 2.17
577 578 9.525826 AAAAGAGATTGAAGTGGATGTTAGATT 57.474 29.630 0.00 0.00 0.00 2.40
578 579 9.525826 AAAAAGAGATTGAAGTGGATGTTAGAT 57.474 29.630 0.00 0.00 0.00 1.98
579 580 8.924511 AAAAAGAGATTGAAGTGGATGTTAGA 57.075 30.769 0.00 0.00 0.00 2.10
581 582 9.567776 TGTAAAAAGAGATTGAAGTGGATGTTA 57.432 29.630 0.00 0.00 0.00 2.41
582 583 8.463930 TGTAAAAAGAGATTGAAGTGGATGTT 57.536 30.769 0.00 0.00 0.00 2.71
583 584 8.463930 TTGTAAAAAGAGATTGAAGTGGATGT 57.536 30.769 0.00 0.00 0.00 3.06
584 585 9.918630 AATTGTAAAAAGAGATTGAAGTGGATG 57.081 29.630 0.00 0.00 0.00 3.51
586 587 9.965824 GAAATTGTAAAAAGAGATTGAAGTGGA 57.034 29.630 0.00 0.00 0.00 4.02
587 588 9.971922 AGAAATTGTAAAAAGAGATTGAAGTGG 57.028 29.630 0.00 0.00 0.00 4.00
606 607 5.296283 TGGCACATGGAAAACAAAGAAATTG 59.704 36.000 0.00 0.00 44.95 2.32
607 608 5.435291 TGGCACATGGAAAACAAAGAAATT 58.565 33.333 0.00 0.00 0.00 1.82
608 609 5.033589 TGGCACATGGAAAACAAAGAAAT 57.966 34.783 0.00 0.00 0.00 2.17
609 610 4.478206 TGGCACATGGAAAACAAAGAAA 57.522 36.364 0.00 0.00 0.00 2.52
625 626 2.029649 AGCAATGAGTGTTTGATGGCAC 60.030 45.455 0.00 0.00 35.98 5.01
626 627 2.241160 AGCAATGAGTGTTTGATGGCA 58.759 42.857 0.00 0.00 0.00 4.92
627 628 4.439305 TTAGCAATGAGTGTTTGATGGC 57.561 40.909 0.00 0.00 0.00 4.40
628 629 5.359009 AGGATTAGCAATGAGTGTTTGATGG 59.641 40.000 0.00 0.00 0.00 3.51
629 630 6.446781 AGGATTAGCAATGAGTGTTTGATG 57.553 37.500 0.00 0.00 0.00 3.07
630 631 9.499479 CTATAGGATTAGCAATGAGTGTTTGAT 57.501 33.333 0.00 0.00 0.00 2.57
631 632 7.933577 CCTATAGGATTAGCAATGAGTGTTTGA 59.066 37.037 14.11 0.00 37.39 2.69
632 633 7.933577 TCCTATAGGATTAGCAATGAGTGTTTG 59.066 37.037 18.00 0.00 39.78 2.93
633 634 8.034313 TCCTATAGGATTAGCAATGAGTGTTT 57.966 34.615 18.00 0.00 39.78 2.83
634 635 7.618019 TCCTATAGGATTAGCAATGAGTGTT 57.382 36.000 18.00 0.00 39.78 3.32
650 651 6.014242 TGGCATACTCACTTGAATCCTATAGG 60.014 42.308 13.07 13.07 0.00 2.57
651 652 6.870965 GTGGCATACTCACTTGAATCCTATAG 59.129 42.308 0.00 0.00 32.78 1.31
652 653 6.554982 AGTGGCATACTCACTTGAATCCTATA 59.445 38.462 0.00 0.00 42.17 1.31
653 654 5.367937 AGTGGCATACTCACTTGAATCCTAT 59.632 40.000 0.00 0.00 42.17 2.57
654 655 4.716784 AGTGGCATACTCACTTGAATCCTA 59.283 41.667 0.00 0.00 42.17 2.94
655 656 3.521126 AGTGGCATACTCACTTGAATCCT 59.479 43.478 0.00 0.00 42.17 3.24
656 657 3.878778 AGTGGCATACTCACTTGAATCC 58.121 45.455 0.00 0.00 42.17 3.01
667 668 5.407049 AGTATAGGATTGGAGTGGCATACT 58.593 41.667 0.00 0.00 44.02 2.12
668 669 5.746990 AGTATAGGATTGGAGTGGCATAC 57.253 43.478 0.00 0.00 0.00 2.39
669 670 6.763715 AAAGTATAGGATTGGAGTGGCATA 57.236 37.500 0.00 0.00 0.00 3.14
670 671 5.653255 AAAGTATAGGATTGGAGTGGCAT 57.347 39.130 0.00 0.00 0.00 4.40
671 672 5.437060 GAAAAGTATAGGATTGGAGTGGCA 58.563 41.667 0.00 0.00 0.00 4.92
672 673 4.822350 GGAAAAGTATAGGATTGGAGTGGC 59.178 45.833 0.00 0.00 0.00 5.01
673 674 6.058183 CAGGAAAAGTATAGGATTGGAGTGG 58.942 44.000 0.00 0.00 0.00 4.00
674 675 6.653989 ACAGGAAAAGTATAGGATTGGAGTG 58.346 40.000 0.00 0.00 0.00 3.51
675 676 6.893020 ACAGGAAAAGTATAGGATTGGAGT 57.107 37.500 0.00 0.00 0.00 3.85
676 677 6.768381 GGAACAGGAAAAGTATAGGATTGGAG 59.232 42.308 0.00 0.00 0.00 3.86
677 678 6.447084 AGGAACAGGAAAAGTATAGGATTGGA 59.553 38.462 0.00 0.00 0.00 3.53
678 679 6.663734 AGGAACAGGAAAAGTATAGGATTGG 58.336 40.000 0.00 0.00 0.00 3.16
679 680 7.438459 CGTAGGAACAGGAAAAGTATAGGATTG 59.562 40.741 0.00 0.00 0.00 2.67
680 681 7.125356 ACGTAGGAACAGGAAAAGTATAGGATT 59.875 37.037 0.00 0.00 0.00 3.01
681 682 6.610425 ACGTAGGAACAGGAAAAGTATAGGAT 59.390 38.462 0.00 0.00 0.00 3.24
682 683 5.954150 ACGTAGGAACAGGAAAAGTATAGGA 59.046 40.000 0.00 0.00 0.00 2.94
683 684 6.218108 ACGTAGGAACAGGAAAAGTATAGG 57.782 41.667 0.00 0.00 0.00 2.57
684 685 8.543862 AAAACGTAGGAACAGGAAAAGTATAG 57.456 34.615 0.00 0.00 0.00 1.31
685 686 8.149647 TGAAAACGTAGGAACAGGAAAAGTATA 58.850 33.333 0.00 0.00 0.00 1.47
686 687 6.993902 TGAAAACGTAGGAACAGGAAAAGTAT 59.006 34.615 0.00 0.00 0.00 2.12
687 688 6.347696 TGAAAACGTAGGAACAGGAAAAGTA 58.652 36.000 0.00 0.00 0.00 2.24
688 689 5.187687 TGAAAACGTAGGAACAGGAAAAGT 58.812 37.500 0.00 0.00 0.00 2.66
689 690 5.744666 TGAAAACGTAGGAACAGGAAAAG 57.255 39.130 0.00 0.00 0.00 2.27
690 691 6.512342 TTTGAAAACGTAGGAACAGGAAAA 57.488 33.333 0.00 0.00 0.00 2.29
691 692 6.512342 TTTTGAAAACGTAGGAACAGGAAA 57.488 33.333 0.00 0.00 0.00 3.13
692 693 6.238814 GGATTTTGAAAACGTAGGAACAGGAA 60.239 38.462 0.00 0.00 0.00 3.36
693 694 5.239963 GGATTTTGAAAACGTAGGAACAGGA 59.760 40.000 0.00 0.00 0.00 3.86
694 695 5.240844 AGGATTTTGAAAACGTAGGAACAGG 59.759 40.000 0.00 0.00 0.00 4.00
695 696 6.313744 AGGATTTTGAAAACGTAGGAACAG 57.686 37.500 0.00 0.00 0.00 3.16
696 697 6.766944 TGTAGGATTTTGAAAACGTAGGAACA 59.233 34.615 0.00 0.00 0.00 3.18
697 698 7.193377 TGTAGGATTTTGAAAACGTAGGAAC 57.807 36.000 0.00 0.00 0.00 3.62
698 699 7.804843 TTGTAGGATTTTGAAAACGTAGGAA 57.195 32.000 0.00 0.00 0.00 3.36
699 700 7.804843 TTTGTAGGATTTTGAAAACGTAGGA 57.195 32.000 0.00 0.00 0.00 2.94
700 701 8.293867 TGATTTGTAGGATTTTGAAAACGTAGG 58.706 33.333 0.00 0.00 0.00 3.18
701 702 9.672086 TTGATTTGTAGGATTTTGAAAACGTAG 57.328 29.630 0.00 0.00 0.00 3.51
703 704 8.934507 TTTGATTTGTAGGATTTTGAAAACGT 57.065 26.923 0.00 0.00 0.00 3.99
704 705 9.243637 TCTTTGATTTGTAGGATTTTGAAAACG 57.756 29.630 0.00 0.00 0.00 3.60
706 707 9.762933 CCTCTTTGATTTGTAGGATTTTGAAAA 57.237 29.630 0.00 0.00 0.00 2.29
707 708 7.872483 GCCTCTTTGATTTGTAGGATTTTGAAA 59.128 33.333 0.00 0.00 0.00 2.69
708 709 7.378181 GCCTCTTTGATTTGTAGGATTTTGAA 58.622 34.615 0.00 0.00 0.00 2.69
709 710 6.071391 GGCCTCTTTGATTTGTAGGATTTTGA 60.071 38.462 0.00 0.00 0.00 2.69
710 711 6.101997 GGCCTCTTTGATTTGTAGGATTTTG 58.898 40.000 0.00 0.00 0.00 2.44
711 712 5.187772 GGGCCTCTTTGATTTGTAGGATTTT 59.812 40.000 0.84 0.00 0.00 1.82
712 713 4.711846 GGGCCTCTTTGATTTGTAGGATTT 59.288 41.667 0.84 0.00 0.00 2.17
713 714 4.017130 AGGGCCTCTTTGATTTGTAGGATT 60.017 41.667 0.00 0.00 0.00 3.01
714 715 3.529319 AGGGCCTCTTTGATTTGTAGGAT 59.471 43.478 0.00 0.00 0.00 3.24
715 716 2.919602 AGGGCCTCTTTGATTTGTAGGA 59.080 45.455 0.00 0.00 0.00 2.94
716 717 3.372440 AGGGCCTCTTTGATTTGTAGG 57.628 47.619 0.00 0.00 0.00 3.18
717 718 4.336713 GCTTAGGGCCTCTTTGATTTGTAG 59.663 45.833 10.74 0.00 34.27 2.74
718 719 4.018415 AGCTTAGGGCCTCTTTGATTTGTA 60.018 41.667 10.74 0.00 43.05 2.41
719 720 3.092301 GCTTAGGGCCTCTTTGATTTGT 58.908 45.455 10.74 0.00 34.27 2.83
720 721 3.129988 CAGCTTAGGGCCTCTTTGATTTG 59.870 47.826 10.74 0.00 43.05 2.32
721 722 3.359950 CAGCTTAGGGCCTCTTTGATTT 58.640 45.455 10.74 0.00 43.05 2.17
722 723 2.947695 GCAGCTTAGGGCCTCTTTGATT 60.948 50.000 10.74 0.00 43.05 2.57
723 724 1.409381 GCAGCTTAGGGCCTCTTTGAT 60.409 52.381 10.74 0.00 43.05 2.57
724 725 0.035056 GCAGCTTAGGGCCTCTTTGA 60.035 55.000 10.74 0.00 43.05 2.69
725 726 0.322816 TGCAGCTTAGGGCCTCTTTG 60.323 55.000 10.74 6.08 43.05 2.77
726 727 0.627986 ATGCAGCTTAGGGCCTCTTT 59.372 50.000 10.74 0.00 43.05 2.52
727 728 0.106819 CATGCAGCTTAGGGCCTCTT 60.107 55.000 10.74 0.00 43.05 2.85
728 729 1.277580 ACATGCAGCTTAGGGCCTCT 61.278 55.000 10.74 0.00 43.05 3.69
729 730 1.099879 CACATGCAGCTTAGGGCCTC 61.100 60.000 10.74 0.00 43.05 4.70
730 731 1.077212 CACATGCAGCTTAGGGCCT 60.077 57.895 12.58 12.58 43.05 5.19
731 732 2.779033 GCACATGCAGCTTAGGGCC 61.779 63.158 0.00 0.00 43.05 5.80
732 733 2.803479 GCACATGCAGCTTAGGGC 59.197 61.111 0.00 0.00 41.59 5.19
753 754 5.984323 CGATCTTGATCTGGATGGCATATAG 59.016 44.000 0.00 1.73 0.00 1.31
754 755 5.683249 GCGATCTTGATCTGGATGGCATATA 60.683 44.000 20.76 0.00 41.21 0.86
792 793 4.740695 GCGAGGACATGTAGAGTCATTAAC 59.259 45.833 0.00 0.00 37.74 2.01
851 2687 0.317799 CGCCTCTCTCCATCTCCATG 59.682 60.000 0.00 0.00 0.00 3.66
875 2711 9.597681 TGTTGGGTAATTAAAAATGGTTAGGTA 57.402 29.630 0.00 0.00 0.00 3.08
876 2712 8.493787 TGTTGGGTAATTAAAAATGGTTAGGT 57.506 30.769 0.00 0.00 0.00 3.08
877 2713 8.038351 CCTGTTGGGTAATTAAAAATGGTTAGG 58.962 37.037 0.00 0.00 0.00 2.69
904 2746 8.826765 AGCCGGGTTATTATACTACTACTACTA 58.173 37.037 0.00 0.00 0.00 1.82
917 2759 3.945640 AAGTTGGAGCCGGGTTATTAT 57.054 42.857 8.00 0.00 0.00 1.28
966 2808 5.504665 CGTGATGAAAGGGCAACTGATATTC 60.505 44.000 0.00 0.00 0.00 1.75
979 2821 1.089920 CTTGGGCTCGTGATGAAAGG 58.910 55.000 0.00 0.00 0.00 3.11
980 2822 0.449388 GCTTGGGCTCGTGATGAAAG 59.551 55.000 0.00 0.00 35.22 2.62
994 2839 3.207669 GGAGCTCCGCATGCTTGG 61.208 66.667 19.06 10.85 41.30 3.61
1251 3096 2.181777 GTGACGATGCAGAGCGGA 59.818 61.111 10.49 0.00 34.48 5.54
1388 3236 3.441290 CGACGGCGAAGTCCTCCT 61.441 66.667 16.62 0.00 40.82 3.69
1389 3237 3.745803 ACGACGGCGAAGTCCTCC 61.746 66.667 22.49 0.00 41.64 4.30
1395 3243 3.966026 GAGGTCCACGACGGCGAAG 62.966 68.421 22.49 9.75 41.64 3.79
1911 3780 1.602771 GTACAGGGCCTGGAACCTC 59.397 63.158 35.34 13.46 35.51 3.85
1986 3855 2.029073 CAGTGCGTCGGGTTCACT 59.971 61.111 0.00 0.00 41.29 3.41
2335 4219 0.544357 TCCCTGATCCACCTCGTGTT 60.544 55.000 0.00 0.00 0.00 3.32
2395 4279 1.647545 TAGTTCACGTACGCCTCCCG 61.648 60.000 16.72 0.00 44.21 5.14
2658 4548 4.994756 CCCACTGCCCACCAACCC 62.995 72.222 0.00 0.00 0.00 4.11
2693 4586 2.029828 ACAGAGCTAAGGACTGAACACG 60.030 50.000 6.38 0.00 35.85 4.49
2718 4611 4.518249 AGAAACTAGGCATCAGTTTAGCC 58.482 43.478 10.59 0.00 44.24 3.93
2719 4612 6.502136 AAAGAAACTAGGCATCAGTTTAGC 57.498 37.500 10.59 2.52 44.24 3.09
2758 4654 6.292488 CCAACAAGTACTACGTGGTAAAACAG 60.292 42.308 13.78 5.25 31.79 3.16
2772 4668 7.174946 CCATTGACAATAAGACCAACAAGTACT 59.825 37.037 0.00 0.00 0.00 2.73
2776 4672 6.151691 CACCATTGACAATAAGACCAACAAG 58.848 40.000 0.00 0.00 0.00 3.16
2780 4676 6.511416 CAAACACCATTGACAATAAGACCAA 58.489 36.000 0.00 0.00 31.84 3.67
2782 4678 4.923281 GCAAACACCATTGACAATAAGACC 59.077 41.667 0.00 0.00 31.84 3.85
2791 4687 1.135689 CCGCTAGCAAACACCATTGAC 60.136 52.381 16.45 0.00 31.84 3.18
2835 4737 3.058501 CCGCTCCGTTTTATTCAAACACT 60.059 43.478 0.00 0.00 44.63 3.55
2839 4741 2.780714 TCCCGCTCCGTTTTATTCAAA 58.219 42.857 0.00 0.00 0.00 2.69
2858 4760 1.233019 CTCCCATGATTGGACGCATC 58.767 55.000 0.00 0.00 46.92 3.91
2866 4768 2.093500 TGTTCGTCTCCTCCCATGATTG 60.093 50.000 0.00 0.00 0.00 2.67
2870 4772 1.406069 CCTTGTTCGTCTCCTCCCATG 60.406 57.143 0.00 0.00 0.00 3.66
2871 4773 0.905357 CCTTGTTCGTCTCCTCCCAT 59.095 55.000 0.00 0.00 0.00 4.00
2873 4775 1.477295 CTACCTTGTTCGTCTCCTCCC 59.523 57.143 0.00 0.00 0.00 4.30
2874 4776 2.424246 CTCTACCTTGTTCGTCTCCTCC 59.576 54.545 0.00 0.00 0.00 4.30
2875 4777 3.127376 GTCTCTACCTTGTTCGTCTCCTC 59.873 52.174 0.00 0.00 0.00 3.71
2876 4778 3.083293 GTCTCTACCTTGTTCGTCTCCT 58.917 50.000 0.00 0.00 0.00 3.69
2878 4780 2.740981 TCGTCTCTACCTTGTTCGTCTC 59.259 50.000 0.00 0.00 0.00 3.36
2879 4781 2.743126 CTCGTCTCTACCTTGTTCGTCT 59.257 50.000 0.00 0.00 0.00 4.18
2880 4782 2.728535 GCTCGTCTCTACCTTGTTCGTC 60.729 54.545 0.00 0.00 0.00 4.20
2882 4784 1.199327 TGCTCGTCTCTACCTTGTTCG 59.801 52.381 0.00 0.00 0.00 3.95
2883 4785 2.869897 CTGCTCGTCTCTACCTTGTTC 58.130 52.381 0.00 0.00 0.00 3.18
2884 4786 1.067495 GCTGCTCGTCTCTACCTTGTT 60.067 52.381 0.00 0.00 0.00 2.83
2885 4787 0.528470 GCTGCTCGTCTCTACCTTGT 59.472 55.000 0.00 0.00 0.00 3.16
2886 4788 0.528017 TGCTGCTCGTCTCTACCTTG 59.472 55.000 0.00 0.00 0.00 3.61
2887 4789 1.479709 ATGCTGCTCGTCTCTACCTT 58.520 50.000 0.00 0.00 0.00 3.50
2888 4790 1.135915 CAATGCTGCTCGTCTCTACCT 59.864 52.381 0.00 0.00 0.00 3.08
2889 4791 1.565305 CAATGCTGCTCGTCTCTACC 58.435 55.000 0.00 0.00 0.00 3.18
2890 4792 0.926846 GCAATGCTGCTCGTCTCTAC 59.073 55.000 0.00 0.00 45.74 2.59
2891 4793 3.352447 GCAATGCTGCTCGTCTCTA 57.648 52.632 0.00 0.00 45.74 2.43
2904 4806 2.888534 GCGCTGGCATTGGCAATG 60.889 61.111 30.96 30.96 43.71 2.82
2905 4807 4.151582 GGCGCTGGCATTGGCAAT 62.152 61.111 14.35 6.96 43.71 3.56
2908 4810 4.884257 CATGGCGCTGGCATTGGC 62.884 66.667 7.64 2.73 46.61 4.52
2909 4811 4.215742 CCATGGCGCTGGCATTGG 62.216 66.667 7.64 13.57 46.61 3.16
2910 4812 3.009192 AACCATGGCGCTGGCATTG 62.009 57.895 13.04 12.66 46.61 2.82
2911 4813 2.681064 AACCATGGCGCTGGCATT 60.681 55.556 13.04 0.99 46.61 3.56
2931 4833 4.100084 TCCATGGCCTGCAGGTCG 62.100 66.667 31.24 18.37 44.44 4.79
2932 4834 2.124403 CTCCATGGCCTGCAGGTC 60.124 66.667 30.94 30.94 41.09 3.85
2933 4835 4.437587 GCTCCATGGCCTGCAGGT 62.438 66.667 32.81 11.89 37.57 4.00
2934 4836 4.124943 AGCTCCATGGCCTGCAGG 62.125 66.667 29.34 29.34 38.53 4.85
2936 4838 4.119363 GGAGCTCCATGGCCTGCA 62.119 66.667 28.43 0.00 35.64 4.41
2950 4852 2.523507 CGAGCTCAAGCATGCGGAG 61.524 63.158 27.76 27.76 45.16 4.63
2952 4854 2.816958 ACGAGCTCAAGCATGCGG 60.817 61.111 15.40 9.14 45.16 5.69
2953 4855 1.426816 ATCACGAGCTCAAGCATGCG 61.427 55.000 15.40 7.46 45.16 4.73
2954 4856 0.027716 CATCACGAGCTCAAGCATGC 59.972 55.000 15.40 10.51 45.16 4.06
2955 4857 1.648504 TCATCACGAGCTCAAGCATG 58.351 50.000 15.40 9.71 45.16 4.06
2956 4858 2.277969 CTTCATCACGAGCTCAAGCAT 58.722 47.619 15.40 0.00 45.16 3.79
2957 4859 1.001293 ACTTCATCACGAGCTCAAGCA 59.999 47.619 15.40 0.00 45.16 3.91
2958 4860 1.392853 CACTTCATCACGAGCTCAAGC 59.607 52.381 15.40 0.00 42.49 4.01
2963 4865 1.151668 GTTGCACTTCATCACGAGCT 58.848 50.000 0.00 0.00 0.00 4.09
2965 4867 2.407090 TCAGTTGCACTTCATCACGAG 58.593 47.619 0.00 0.00 0.00 4.18
2967 4869 5.475273 AATATCAGTTGCACTTCATCACG 57.525 39.130 0.00 0.00 0.00 4.35
2968 4870 7.502177 CAAAATATCAGTTGCACTTCATCAC 57.498 36.000 0.00 0.00 0.00 3.06
2979 4881 3.488047 CGAGGCCAGCAAAATATCAGTTG 60.488 47.826 5.01 0.00 0.00 3.16
2981 4883 2.292267 CGAGGCCAGCAAAATATCAGT 58.708 47.619 5.01 0.00 0.00 3.41
2982 4884 1.002033 GCGAGGCCAGCAAAATATCAG 60.002 52.381 16.97 0.00 34.19 2.90
2983 4885 1.024271 GCGAGGCCAGCAAAATATCA 58.976 50.000 16.97 0.00 34.19 2.15
2984 4886 1.024271 TGCGAGGCCAGCAAAATATC 58.976 50.000 21.35 0.00 42.18 1.63
2986 4888 4.732568 TGCGAGGCCAGCAAAATA 57.267 50.000 21.35 0.14 42.18 1.40
3001 4903 4.028509 CAGCTTTATTTTATCGCACGTTGC 60.029 41.667 0.00 0.00 40.69 4.17
3002 4904 4.495472 CCAGCTTTATTTTATCGCACGTTG 59.505 41.667 0.00 0.00 0.00 4.10
3003 4905 4.393680 TCCAGCTTTATTTTATCGCACGTT 59.606 37.500 0.00 0.00 0.00 3.99
3004 4906 3.936453 TCCAGCTTTATTTTATCGCACGT 59.064 39.130 0.00 0.00 0.00 4.49
3005 4907 4.518217 CTCCAGCTTTATTTTATCGCACG 58.482 43.478 0.00 0.00 0.00 5.34
3006 4908 4.282873 GCTCCAGCTTTATTTTATCGCAC 58.717 43.478 0.00 0.00 38.21 5.34
3007 4909 4.552166 GCTCCAGCTTTATTTTATCGCA 57.448 40.909 0.00 0.00 38.21 5.10
3021 4923 2.808567 GCTCTAATAACCCAGCTCCAGC 60.809 54.545 0.00 0.00 42.49 4.85
3022 4924 2.435805 TGCTCTAATAACCCAGCTCCAG 59.564 50.000 0.00 0.00 32.76 3.86
3023 4925 2.477245 TGCTCTAATAACCCAGCTCCA 58.523 47.619 0.00 0.00 32.76 3.86
3024 4926 3.118223 AGTTGCTCTAATAACCCAGCTCC 60.118 47.826 0.00 0.00 32.76 4.70
3025 4927 4.123506 GAGTTGCTCTAATAACCCAGCTC 58.876 47.826 0.00 0.00 32.76 4.09
3026 4928 3.118223 GGAGTTGCTCTAATAACCCAGCT 60.118 47.826 0.00 0.00 32.76 4.24
3027 4929 3.206964 GGAGTTGCTCTAATAACCCAGC 58.793 50.000 0.00 0.00 0.00 4.85
3028 4930 4.487714 TGGAGTTGCTCTAATAACCCAG 57.512 45.455 0.00 0.00 0.00 4.45
3029 4931 4.585879 GTTGGAGTTGCTCTAATAACCCA 58.414 43.478 0.00 0.00 33.81 4.51
3030 4932 3.621715 CGTTGGAGTTGCTCTAATAACCC 59.378 47.826 0.00 0.00 33.81 4.11
3031 4933 3.621715 CCGTTGGAGTTGCTCTAATAACC 59.378 47.826 0.00 0.00 33.81 2.85
3055 4957 0.393448 TCACCGTTCATTTGGGTCGA 59.607 50.000 0.00 0.00 29.82 4.20
3153 5056 2.343758 GTCTCAGGCCAGCGTTGA 59.656 61.111 5.01 0.00 0.00 3.18
3293 5393 7.745155 GCCTCGTAATTTAGTCTGTTTTCTTTC 59.255 37.037 0.00 0.00 0.00 2.62
3305 5408 1.149964 GCGCCGCCTCGTAATTTAGT 61.150 55.000 0.00 0.00 0.00 2.24
3369 5542 4.794439 CGGTGCCGACGCTCATCA 62.794 66.667 4.35 0.00 42.83 3.07
3651 5854 2.047655 CGGGAGTAGTGCGCCAAA 60.048 61.111 4.18 0.00 38.95 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.