AutoCloner

Multiple sequence alignment - TraesCS2A01G123000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G123000	chr2A	100.000	3004	0	0	1	3004	72742593	72739590	0.000000e+00	5548.0
1	TraesCS2A01G123000	chr2A	89.421	898	79	15	1103	1997	72755087	72754203	0.000000e+00	1118.0
2	TraesCS2A01G123000	chr2A	98.718	624	8	0	2246	2869	455680550	455681173	0.000000e+00	1109.0
3	TraesCS2A01G123000	chr2A	98.562	626	8	1	2247	2872	348391118	348391742	0.000000e+00	1105.0
4	TraesCS2A01G123000	chr2A	98.254	630	11	0	2244	2873	397428731	397428102	0.000000e+00	1103.0
5	TraesCS2A01G123000	chr2A	98.560	625	8	1	2247	2871	424165965	424165342	0.000000e+00	1103.0
6	TraesCS2A01G123000	chr2A	88.009	909	92	10	1091	1997	72751877	72750984	0.000000e+00	1059.0
7	TraesCS2A01G123000	chr2A	100.000	30	0	0	484	513	776440866	776440895	4.180000e-04	56.5
8	TraesCS2A01G123000	chr2D	91.001	1589	75	24	692	2248	73288102	73289654	0.000000e+00	2080.0
9	TraesCS2A01G123000	chr2D	89.866	898	87	4	1103	1998	73268585	73269480	0.000000e+00	1151.0
10	TraesCS2A01G123000	chr2D	84.682	803	113	9	1198	1995	73316904	73317701	0.000000e+00	793.0
11	TraesCS2A01G123000	chr2D	78.739	809	155	17	1176	1977	136438379	136437581	2.650000e-145	525.0
12	TraesCS2A01G123000	chr2B	95.328	792	36	1	1246	2036	111060473	111059682	0.000000e+00	1256.0
13	TraesCS2A01G123000	chr2B	88.729	905	89	8	1103	2005	111070353	111069460	0.000000e+00	1094.0
14	TraesCS2A01G123000	chr2B	83.582	804	120	11	1198	1995	111035647	111034850	0.000000e+00	743.0
15	TraesCS2A01G123000	chr2B	86.552	580	33	19	695	1250	111066286	111065728	5.540000e-167	597.0
16	TraesCS2A01G123000	chr3B	98.413	630	10	0	2247	2876	433586550	433585921	0.000000e+00	1109.0
17	TraesCS2A01G123000	chr4A	98.560	625	9	0	2247	2871	196165432	196166056	0.000000e+00	1105.0
18	TraesCS2A01G123000	chr4A	98.248	628	9	1	2244	2871	144003529	144004154	0.000000e+00	1098.0
19	TraesCS2A01G123000	chr6A	98.400	625	10	0	2247	2871	189579398	189580022	0.000000e+00	1099.0
20	TraesCS2A01G123000	chr1A	97.500	640	16	0	2240	2879	479867340	479866701	0.000000e+00	1094.0
21	TraesCS2A01G123000	chr5D	92.548	416	30	1	1	416	9916797	9916383	1.990000e-166	595.0
22	TraesCS2A01G123000	chr5A	88.614	202	15	4	45	246	3317958	3318151	3.870000e-59	239.0
23	TraesCS2A01G123000	chr5A	88.462	130	14	1	247	376	3319608	3319736	4.010000e-34	156.0
24	TraesCS2A01G123000	chr6B	85.217	115	9	3	2	116	698335921	698336027	8.800000e-21	111.0
25	TraesCS2A01G123000	chr7B	100.000	28	0	0	483	510	691178565	691178592	5.000000e-03	52.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G123000	chr2A	72739590	72742593	3003	True	5548.0	5548	100.0000	1	3004	1	chr2A.!!$R1	3003
1	TraesCS2A01G123000	chr2A	455680550	455681173	623	False	1109.0	1109	98.7180	2246	2869	1	chr2A.!!$F2	623
2	TraesCS2A01G123000	chr2A	348391118	348391742	624	False	1105.0	1105	98.5620	2247	2872	1	chr2A.!!$F1	625
3	TraesCS2A01G123000	chr2A	397428102	397428731	629	True	1103.0	1103	98.2540	2244	2873	1	chr2A.!!$R2	629
4	TraesCS2A01G123000	chr2A	424165342	424165965	623	True	1103.0	1103	98.5600	2247	2871	1	chr2A.!!$R3	624
5	TraesCS2A01G123000	chr2A	72750984	72755087	4103	True	1088.5	1118	88.7150	1091	1997	2	chr2A.!!$R4	906
6	TraesCS2A01G123000	chr2D	73288102	73289654	1552	False	2080.0	2080	91.0010	692	2248	1	chr2D.!!$F2	1556
7	TraesCS2A01G123000	chr2D	73268585	73269480	895	False	1151.0	1151	89.8660	1103	1998	1	chr2D.!!$F1	895
8	TraesCS2A01G123000	chr2D	73316904	73317701	797	False	793.0	793	84.6820	1198	1995	1	chr2D.!!$F3	797
9	TraesCS2A01G123000	chr2D	136437581	136438379	798	True	525.0	525	78.7390	1176	1977	1	chr2D.!!$R1	801
10	TraesCS2A01G123000	chr2B	111059682	111060473	791	True	1256.0	1256	95.3280	1246	2036	1	chr2B.!!$R2	790
11	TraesCS2A01G123000	chr2B	111065728	111070353	4625	True	845.5	1094	87.6405	695	2005	2	chr2B.!!$R3	1310
12	TraesCS2A01G123000	chr2B	111034850	111035647	797	True	743.0	743	83.5820	1198	1995	1	chr2B.!!$R1	797
13	TraesCS2A01G123000	chr3B	433585921	433586550	629	True	1109.0	1109	98.4130	2247	2876	1	chr3B.!!$R1	629
14	TraesCS2A01G123000	chr4A	196165432	196166056	624	False	1105.0	1105	98.5600	2247	2871	1	chr4A.!!$F2	624
15	TraesCS2A01G123000	chr4A	144003529	144004154	625	False	1098.0	1098	98.2480	2244	2871	1	chr4A.!!$F1	627
16	TraesCS2A01G123000	chr6A	189579398	189580022	624	False	1099.0	1099	98.4000	2247	2871	1	chr6A.!!$F1	624
17	TraesCS2A01G123000	chr1A	479866701	479867340	639	True	1094.0	1094	97.5000	2240	2879	1	chr1A.!!$R1	639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
349	350	0.040067	CAAGTGAAAAGGTGCGCTCC	60.04	55.0	20.71	20.71	0.0	4.7	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2207	5506	0.684479	TCCGGCTGCTGTCATCTAGT	60.684	55.0	7.82	0.0	0.0	2.57	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
18	19	2.652313	TTTCAACCTGCCCGGAATG	58.348	52.632	0.73	0.00	36.31	2.67
19	20	0.897863	TTTCAACCTGCCCGGAATGG	60.898	55.000	0.73	3.72	36.31	3.16
20	21	1.784301	TTCAACCTGCCCGGAATGGA	61.784	55.000	0.73	0.00	42.00	3.41
21	22	2.046285	CAACCTGCCCGGAATGGAC	61.046	63.158	0.73	0.00	42.00	4.02
22	23	2.534396	AACCTGCCCGGAATGGACA	61.534	57.895	0.73	0.00	42.00	4.02
23	24	2.075355	AACCTGCCCGGAATGGACAA	62.075	55.000	0.73	0.00	42.00	3.18
24	25	1.750399	CCTGCCCGGAATGGACAAG	60.750	63.158	0.73	0.00	42.00	3.16
25	26	1.750399	CTGCCCGGAATGGACAAGG	60.750	63.158	0.73	0.00	42.00	3.61
26	27	3.140814	GCCCGGAATGGACAAGGC	61.141	66.667	0.73	0.00	42.00	4.35
27	28	2.440247	CCCGGAATGGACAAGGCC	60.440	66.667	0.73	0.00	42.00	5.19
28	29	2.354729	CCGGAATGGACAAGGCCA	59.645	61.111	5.01	0.00	42.00	5.36
33	34	4.664062	ATGGACAAGGCCATTCGG	57.336	55.556	5.01	0.00	46.29	4.30
34	35	1.076777	ATGGACAAGGCCATTCGGG	60.077	57.895	5.01	0.00	46.29	5.14
43	44	3.741860	CCATTCGGGCATCTGCTC	58.258	61.111	1.70	0.00	41.70	4.26
44	45	1.147824	CCATTCGGGCATCTGCTCT	59.852	57.895	0.00	0.00	40.01	4.09
45	46	0.465097	CCATTCGGGCATCTGCTCTT	60.465	55.000	0.00	0.00	40.01	2.85
46	47	0.661552	CATTCGGGCATCTGCTCTTG	59.338	55.000	0.00	0.00	40.01	3.02
47	48	0.543277	ATTCGGGCATCTGCTCTTGA	59.457	50.000	0.00	0.00	40.01	3.02
48	49	0.543277	TTCGGGCATCTGCTCTTGAT	59.457	50.000	0.00	0.00	40.01	2.57
49	50	0.179065	TCGGGCATCTGCTCTTGATG	60.179	55.000	0.00	0.00	40.01	3.07
50	51	0.463295	CGGGCATCTGCTCTTGATGT	60.463	55.000	0.00	0.00	42.21	3.06
51	52	1.022735	GGGCATCTGCTCTTGATGTG	58.977	55.000	1.70	0.00	42.21	3.21
52	53	0.381089	GGCATCTGCTCTTGATGTGC	59.619	55.000	1.70	0.00	42.21	4.57
53	54	1.380524	GCATCTGCTCTTGATGTGCT	58.619	50.000	0.00	0.00	42.21	4.40
54	55	2.558378	GCATCTGCTCTTGATGTGCTA	58.442	47.619	0.00	0.00	42.21	3.49
55	56	3.139850	GCATCTGCTCTTGATGTGCTAT	58.860	45.455	0.00	0.00	42.21	2.97
56	57	3.564644	GCATCTGCTCTTGATGTGCTATT	59.435	43.478	0.00	0.00	42.21	1.73
57	58	4.036498	GCATCTGCTCTTGATGTGCTATTT	59.964	41.667	0.00	0.00	42.21	1.40
58	59	5.511571	CATCTGCTCTTGATGTGCTATTTG	58.488	41.667	0.00	0.00	37.22	2.32
59	60	3.376234	TCTGCTCTTGATGTGCTATTTGC	59.624	43.478	0.00	0.00	43.25	3.68
60	61	3.349927	TGCTCTTGATGTGCTATTTGCT	58.650	40.909	0.00	0.00	43.37	3.91
61	62	3.376234	TGCTCTTGATGTGCTATTTGCTC	59.624	43.478	0.00	0.00	43.37	4.26
62	63	3.626670	GCTCTTGATGTGCTATTTGCTCT	59.373	43.478	0.00	0.00	43.37	4.09
63	64	4.260702	GCTCTTGATGTGCTATTTGCTCTC	60.261	45.833	0.00	0.00	43.37	3.20
64	65	5.095145	TCTTGATGTGCTATTTGCTCTCT	57.905	39.130	0.00	0.00	43.37	3.10
65	66	5.494724	TCTTGATGTGCTATTTGCTCTCTT	58.505	37.500	0.00	0.00	43.37	2.85
66	67	5.942236	TCTTGATGTGCTATTTGCTCTCTTT	59.058	36.000	0.00	0.00	43.37	2.52
67	68	6.432162	TCTTGATGTGCTATTTGCTCTCTTTT	59.568	34.615	0.00	0.00	43.37	2.27
68	69	6.187125	TGATGTGCTATTTGCTCTCTTTTC	57.813	37.500	0.00	0.00	43.37	2.29
69	70	5.706833	TGATGTGCTATTTGCTCTCTTTTCA	59.293	36.000	0.00	0.00	43.37	2.69
70	71	5.362556	TGTGCTATTTGCTCTCTTTTCAC	57.637	39.130	0.00	0.00	43.37	3.18
71	72	4.821260	TGTGCTATTTGCTCTCTTTTCACA	59.179	37.500	0.00	0.00	43.37	3.58
72	73	5.299028	TGTGCTATTTGCTCTCTTTTCACAA	59.701	36.000	0.00	0.00	43.37	3.33
73	74	5.855395	GTGCTATTTGCTCTCTTTTCACAAG	59.145	40.000	0.00	0.00	43.37	3.16
74	75	5.764686	TGCTATTTGCTCTCTTTTCACAAGA	59.235	36.000	0.00	0.00	43.37	3.02
75	76	6.262944	TGCTATTTGCTCTCTTTTCACAAGAA	59.737	34.615	0.00	0.00	43.37	2.52
76	77	7.040201	TGCTATTTGCTCTCTTTTCACAAGAAT	60.040	33.333	0.00	0.00	43.37	2.40
77	78	7.811713	GCTATTTGCTCTCTTTTCACAAGAATT	59.188	33.333	0.00	0.00	38.95	2.17
82	83	9.683069	TTGCTCTCTTTTCACAAGAATTAAATC	57.317	29.630	0.00	0.00	32.89	2.17
83	84	8.849168	TGCTCTCTTTTCACAAGAATTAAATCA	58.151	29.630	0.00	0.00	32.89	2.57
84	85	9.683069	GCTCTCTTTTCACAAGAATTAAATCAA	57.317	29.630	0.00	0.00	32.89	2.57
91	92	9.677567	TTTCACAAGAATTAAATCAAGTGTAGC	57.322	29.630	12.31	0.00	32.89	3.58
92	93	7.816640	TCACAAGAATTAAATCAAGTGTAGCC	58.183	34.615	12.31	0.00	31.99	3.93
93	94	7.665559	TCACAAGAATTAAATCAAGTGTAGCCT	59.334	33.333	12.31	0.00	31.99	4.58
94	95	8.946085	CACAAGAATTAAATCAAGTGTAGCCTA	58.054	33.333	7.03	0.00	0.00	3.93
95	96	8.947115	ACAAGAATTAAATCAAGTGTAGCCTAC	58.053	33.333	0.00	0.00	0.00	3.18
96	97	8.946085	CAAGAATTAAATCAAGTGTAGCCTACA	58.054	33.333	0.00	0.00	36.08	2.74
97	98	9.686683	AAGAATTAAATCAAGTGTAGCCTACAT	57.313	29.630	8.00	0.00	41.34	2.29
98	99	9.113838	AGAATTAAATCAAGTGTAGCCTACATG	57.886	33.333	8.00	3.51	41.34	3.21
99	100	9.109393	GAATTAAATCAAGTGTAGCCTACATGA	57.891	33.333	8.00	9.09	41.34	3.07
100	101	9.632638	AATTAAATCAAGTGTAGCCTACATGAT	57.367	29.630	12.94	12.94	39.05	2.45
101	102	8.662781	TTAAATCAAGTGTAGCCTACATGATC	57.337	34.615	17.14	2.56	37.40	2.92
102	103	5.876651	ATCAAGTGTAGCCTACATGATCA	57.123	39.130	12.94	0.00	41.34	2.92
103	104	5.675684	TCAAGTGTAGCCTACATGATCAA	57.324	39.130	8.00	0.00	41.34	2.57
104	105	6.239217	TCAAGTGTAGCCTACATGATCAAT	57.761	37.500	8.00	0.00	41.34	2.57
105	106	6.653020	TCAAGTGTAGCCTACATGATCAATT	58.347	36.000	8.00	0.00	41.34	2.32
106	107	7.112122	TCAAGTGTAGCCTACATGATCAATTT	58.888	34.615	8.00	0.00	41.34	1.82
107	108	7.611467	TCAAGTGTAGCCTACATGATCAATTTT	59.389	33.333	8.00	0.00	41.34	1.82
108	109	7.325660	AGTGTAGCCTACATGATCAATTTTG	57.674	36.000	8.00	0.00	41.34	2.44
109	110	6.886459	AGTGTAGCCTACATGATCAATTTTGT	59.114	34.615	8.00	1.75	41.34	2.83
110	111	8.046708	AGTGTAGCCTACATGATCAATTTTGTA	58.953	33.333	8.00	3.00	41.34	2.41
111	112	8.122952	GTGTAGCCTACATGATCAATTTTGTAC	58.877	37.037	8.00	0.00	41.34	2.90
112	113	7.826744	TGTAGCCTACATGATCAATTTTGTACA	59.173	33.333	0.00	0.00	32.89	2.90
113	114	7.886629	AGCCTACATGATCAATTTTGTACAT	57.113	32.000	0.00	0.00	0.00	2.29
114	115	7.709947	AGCCTACATGATCAATTTTGTACATG	58.290	34.615	19.61	19.61	42.23	3.21
115	116	6.418819	GCCTACATGATCAATTTTGTACATGC	59.581	38.462	20.38	1.87	41.36	4.06
116	117	6.634035	CCTACATGATCAATTTTGTACATGCG	59.366	38.462	20.38	15.35	41.36	4.73
117	118	4.799949	ACATGATCAATTTTGTACATGCGC	59.200	37.500	20.38	0.00	41.36	6.09
118	119	4.700268	TGATCAATTTTGTACATGCGCT	57.300	36.364	9.73	0.00	0.00	5.92
119	120	4.413969	TGATCAATTTTGTACATGCGCTG	58.586	39.130	9.73	7.16	0.00	5.18
120	121	3.913548	TCAATTTTGTACATGCGCTGT	57.086	38.095	9.73	13.16	42.13	4.40
121	122	5.123027	TGATCAATTTTGTACATGCGCTGTA	59.877	36.000	9.73	12.08	39.39	2.74
129	130	2.686558	ACATGCGCTGTACTTTTGTG	57.313	45.000	9.73	0.00	35.91	3.33
130	131	1.946768	ACATGCGCTGTACTTTTGTGT	59.053	42.857	9.73	0.00	35.91	3.72
131	132	2.357637	ACATGCGCTGTACTTTTGTGTT	59.642	40.909	9.73	0.00	35.91	3.32
132	133	2.466870	TGCGCTGTACTTTTGTGTTG	57.533	45.000	9.73	0.00	0.00	3.33
133	134	1.740585	TGCGCTGTACTTTTGTGTTGT	59.259	42.857	9.73	0.00	0.00	3.32
134	135	2.937149	TGCGCTGTACTTTTGTGTTGTA	59.063	40.909	9.73	0.00	0.00	2.41
135	136	3.562141	TGCGCTGTACTTTTGTGTTGTAT	59.438	39.130	9.73	0.00	0.00	2.29
136	137	4.148891	GCGCTGTACTTTTGTGTTGTATC	58.851	43.478	0.00	0.00	0.00	2.24
137	138	4.084013	GCGCTGTACTTTTGTGTTGTATCT	60.084	41.667	0.00	0.00	0.00	1.98
138	139	5.560183	GCGCTGTACTTTTGTGTTGTATCTT	60.560	40.000	0.00	0.00	0.00	2.40
139	140	6.427150	CGCTGTACTTTTGTGTTGTATCTTT	58.573	36.000	0.00	0.00	0.00	2.52
140	141	6.573725	CGCTGTACTTTTGTGTTGTATCTTTC	59.426	38.462	0.00	0.00	0.00	2.62
141	142	7.518370	CGCTGTACTTTTGTGTTGTATCTTTCT	60.518	37.037	0.00	0.00	0.00	2.52
142	143	8.129211	GCTGTACTTTTGTGTTGTATCTTTCTT	58.871	33.333	0.00	0.00	0.00	2.52
147	148	9.921637	ACTTTTGTGTTGTATCTTTCTTTTTCA	57.078	25.926	0.00	0.00	0.00	2.69
160	161	4.717233	TCTTTTTCAAGAAGCAGCAACA	57.283	36.364	0.00	0.00	35.99	3.33
161	162	5.266733	TCTTTTTCAAGAAGCAGCAACAT	57.733	34.783	0.00	0.00	35.99	2.71
162	163	5.045215	TCTTTTTCAAGAAGCAGCAACATG	58.955	37.500	0.00	0.00	35.99	3.21
163	164	2.427232	TTCAAGAAGCAGCAACATGC	57.573	45.000	0.00	0.00	46.88	4.06
176	177	4.691860	GCAACATGCTTCTGTCAGTATT	57.308	40.909	0.00	0.00	40.96	1.89
177	178	5.801350	GCAACATGCTTCTGTCAGTATTA	57.199	39.130	0.00	0.00	40.96	0.98
178	179	6.369059	GCAACATGCTTCTGTCAGTATTAT	57.631	37.500	0.00	0.00	40.96	1.28
179	180	6.789262	GCAACATGCTTCTGTCAGTATTATT	58.211	36.000	0.00	0.00	40.96	1.40
180	181	7.253422	GCAACATGCTTCTGTCAGTATTATTT	58.747	34.615	0.00	0.00	40.96	1.40
181	182	7.756722	GCAACATGCTTCTGTCAGTATTATTTT	59.243	33.333	0.00	0.00	40.96	1.82
184	185	9.672673	ACATGCTTCTGTCAGTATTATTTTACT	57.327	29.630	0.00	0.00	32.61	2.24
201	202	9.860650	TTATTTTACTACTATCCATTGGCATGT	57.139	29.630	0.00	0.00	0.00	3.21
202	203	7.566760	TTTTACTACTATCCATTGGCATGTG	57.433	36.000	0.00	0.00	0.00	3.21
203	204	3.480470	ACTACTATCCATTGGCATGTGC	58.520	45.455	0.00	0.00	41.14	4.57
204	205	2.742428	ACTATCCATTGGCATGTGCT	57.258	45.000	4.84	0.00	41.70	4.40
205	206	3.862877	ACTATCCATTGGCATGTGCTA	57.137	42.857	4.84	0.00	41.70	3.49
206	207	3.480470	ACTATCCATTGGCATGTGCTAC	58.520	45.455	4.84	0.00	41.70	3.58
207	208	1.696063	ATCCATTGGCATGTGCTACC	58.304	50.000	4.84	0.00	41.70	3.18
208	209	0.395586	TCCATTGGCATGTGCTACCC	60.396	55.000	4.84	0.00	41.70	3.69
209	210	0.683828	CCATTGGCATGTGCTACCCA	60.684	55.000	4.84	0.00	41.70	4.51
210	211	0.742505	CATTGGCATGTGCTACCCAG	59.257	55.000	4.84	0.00	41.70	4.45
211	212	0.625316	ATTGGCATGTGCTACCCAGA	59.375	50.000	4.84	0.00	41.70	3.86
212	213	0.625316	TTGGCATGTGCTACCCAGAT	59.375	50.000	4.84	0.00	41.70	2.90
213	214	0.181114	TGGCATGTGCTACCCAGATC	59.819	55.000	4.84	0.00	41.70	2.75
214	215	0.181114	GGCATGTGCTACCCAGATCA	59.819	55.000	4.84	0.00	41.70	2.92
215	216	1.408683	GGCATGTGCTACCCAGATCAA	60.409	52.381	4.84	0.00	41.70	2.57
216	217	2.368439	GCATGTGCTACCCAGATCAAA	58.632	47.619	0.00	0.00	38.21	2.69
217	218	2.754552	GCATGTGCTACCCAGATCAAAA	59.245	45.455	0.00	0.00	38.21	2.44
218	219	3.193267	GCATGTGCTACCCAGATCAAAAA	59.807	43.478	0.00	0.00	38.21	1.94
243	244	9.860898	AAAGAAAAGTGAAAAGGATATATGTGC	57.139	29.630	0.00	0.00	0.00	4.57
244	245	8.579850	AGAAAAGTGAAAAGGATATATGTGCA	57.420	30.769	0.00	0.00	0.00	4.57
245	246	9.193806	AGAAAAGTGAAAAGGATATATGTGCAT	57.806	29.630	0.00	0.00	0.00	3.96
246	247	9.455847	GAAAAGTGAAAAGGATATATGTGCATC	57.544	33.333	0.00	0.00	0.00	3.91
247	248	8.523915	AAAGTGAAAAGGATATATGTGCATCA	57.476	30.769	0.00	0.00	0.00	3.07
248	249	8.701908	AAGTGAAAAGGATATATGTGCATCAT	57.298	30.769	0.00	0.00	40.25	2.45
249	250	8.107399	AGTGAAAAGGATATATGTGCATCATG	57.893	34.615	10.77	0.00	37.91	3.07
250	251	7.722728	AGTGAAAAGGATATATGTGCATCATGT	59.277	33.333	10.77	7.58	37.91	3.21
251	252	9.002600	GTGAAAAGGATATATGTGCATCATGTA	57.997	33.333	10.77	9.16	37.91	2.29
252	253	9.002600	TGAAAAGGATATATGTGCATCATGTAC	57.997	33.333	0.00	0.00	37.91	2.90
253	254	7.928307	AAAGGATATATGTGCATCATGTACC	57.072	36.000	3.12	11.26	37.91	3.34
254	255	6.625532	AGGATATATGTGCATCATGTACCA	57.374	37.500	3.12	0.00	37.91	3.25
255	256	7.019656	AGGATATATGTGCATCATGTACCAA	57.980	36.000	3.12	0.00	37.91	3.67
256	257	7.460910	AGGATATATGTGCATCATGTACCAAA	58.539	34.615	3.12	0.00	37.91	3.28
257	258	7.609146	AGGATATATGTGCATCATGTACCAAAG	59.391	37.037	3.12	0.00	37.91	2.77
258	259	3.788333	ATGTGCATCATGTACCAAAGC	57.212	42.857	3.12	0.00	35.19	3.51
259	260	2.794103	TGTGCATCATGTACCAAAGCT	58.206	42.857	3.12	0.00	31.71	3.74
260	261	3.949132	TGTGCATCATGTACCAAAGCTA	58.051	40.909	3.12	0.00	31.71	3.32
261	262	4.331108	TGTGCATCATGTACCAAAGCTAA	58.669	39.130	3.12	0.00	31.71	3.09
262	263	4.395854	TGTGCATCATGTACCAAAGCTAAG	59.604	41.667	3.12	0.00	31.71	2.18
263	264	4.635765	GTGCATCATGTACCAAAGCTAAGA	59.364	41.667	0.00	0.00	0.00	2.10
264	265	5.123820	GTGCATCATGTACCAAAGCTAAGAA	59.876	40.000	0.00	0.00	0.00	2.52
265	266	5.709631	TGCATCATGTACCAAAGCTAAGAAA	59.290	36.000	0.00	0.00	0.00	2.52
266	267	6.377996	TGCATCATGTACCAAAGCTAAGAAAT	59.622	34.615	0.00	0.00	0.00	2.17
267	268	7.093814	TGCATCATGTACCAAAGCTAAGAAATT	60.094	33.333	0.00	0.00	0.00	1.82
268	269	7.761249	GCATCATGTACCAAAGCTAAGAAATTT	59.239	33.333	0.00	0.00	0.00	1.82
294	295	8.621532	ATCTACTTTCAATTAGTTGAGCAACA	57.378	30.769	14.99	0.00	44.62	3.33
295	296	8.087982	TCTACTTTCAATTAGTTGAGCAACAG	57.912	34.615	14.99	4.31	44.62	3.16
296	297	6.699575	ACTTTCAATTAGTTGAGCAACAGT	57.300	33.333	14.99	4.87	44.62	3.55
297	298	7.100458	ACTTTCAATTAGTTGAGCAACAGTT	57.900	32.000	14.99	4.58	44.62	3.16
298	299	6.974622	ACTTTCAATTAGTTGAGCAACAGTTG	59.025	34.615	14.99	9.12	44.62	3.16
299	300	4.858935	TCAATTAGTTGAGCAACAGTTGC	58.141	39.130	28.02	28.02	43.35	4.17
300	301	4.261572	TCAATTAGTTGAGCAACAGTTGCC	60.262	41.667	30.73	22.60	43.64	4.52
301	302	6.667771	TCAATTAGTTGAGCAACAGTTGCCA	61.668	40.000	30.73	24.59	43.64	4.92
302	303	8.388310	TCAATTAGTTGAGCAACAGTTGCCAG	62.388	42.308	30.73	15.54	43.64	4.85
309	310	2.336554	CAACAGTTGCCAGTACATGC	57.663	50.000	0.00	0.00	0.00	4.06
310	311	0.874390	AACAGTTGCCAGTACATGCG	59.126	50.000	0.00	0.00	0.00	4.73
311	312	1.135315	CAGTTGCCAGTACATGCGC	59.865	57.895	0.00	0.00	0.00	6.09
312	313	1.003355	AGTTGCCAGTACATGCGCT	60.003	52.632	9.73	0.00	0.00	5.92
313	314	0.249120	AGTTGCCAGTACATGCGCTA	59.751	50.000	9.73	0.00	0.00	4.26
314	315	0.373716	GTTGCCAGTACATGCGCTAC	59.626	55.000	9.73	2.58	0.00	3.58
315	316	0.742990	TTGCCAGTACATGCGCTACC	60.743	55.000	9.73	0.00	0.00	3.18
316	317	1.144057	GCCAGTACATGCGCTACCT	59.856	57.895	9.73	0.00	0.00	3.08
317	318	0.387929	GCCAGTACATGCGCTACCTA	59.612	55.000	9.73	0.00	0.00	3.08
318	319	1.603172	GCCAGTACATGCGCTACCTAG	60.603	57.143	9.73	0.00	0.00	3.02
319	320	1.954382	CCAGTACATGCGCTACCTAGA	59.046	52.381	9.73	0.00	0.00	2.43
320	321	2.287668	CCAGTACATGCGCTACCTAGAC	60.288	54.545	9.73	0.00	0.00	2.59
321	322	1.955080	AGTACATGCGCTACCTAGACC	59.045	52.381	9.73	0.00	0.00	3.85
322	323	1.679680	GTACATGCGCTACCTAGACCA	59.320	52.381	9.73	0.00	0.00	4.02
323	324	0.460311	ACATGCGCTACCTAGACCAC	59.540	55.000	9.73	0.00	0.00	4.16
324	325	0.459899	CATGCGCTACCTAGACCACA	59.540	55.000	9.73	0.00	0.00	4.17
325	326	1.134818	CATGCGCTACCTAGACCACAA	60.135	52.381	9.73	0.00	0.00	3.33
326	327	0.970640	TGCGCTACCTAGACCACAAA	59.029	50.000	9.73	0.00	0.00	2.83
327	328	1.345089	TGCGCTACCTAGACCACAAAA	59.655	47.619	9.73	0.00	0.00	2.44
328	329	2.000447	GCGCTACCTAGACCACAAAAG	59.000	52.381	0.00	0.00	0.00	2.27
329	330	2.618053	CGCTACCTAGACCACAAAAGG	58.382	52.381	0.00	0.00	35.14	3.11
330	331	2.357075	GCTACCTAGACCACAAAAGGC	58.643	52.381	0.00	0.00	31.98	4.35
331	332	2.290071	GCTACCTAGACCACAAAAGGCA	60.290	50.000	0.00	0.00	31.98	4.75
332	333	3.809324	GCTACCTAGACCACAAAAGGCAA	60.809	47.826	0.00	0.00	31.98	4.52
333	334	2.863809	ACCTAGACCACAAAAGGCAAG	58.136	47.619	0.00	0.00	31.98	4.01
334	335	2.174854	ACCTAGACCACAAAAGGCAAGT	59.825	45.455	0.00	0.00	31.98	3.16
335	336	2.554032	CCTAGACCACAAAAGGCAAGTG	59.446	50.000	0.00	0.00	0.00	3.16
336	337	2.435372	AGACCACAAAAGGCAAGTGA	57.565	45.000	0.00	0.00	35.33	3.41
337	338	2.733956	AGACCACAAAAGGCAAGTGAA	58.266	42.857	0.00	0.00	35.33	3.18
338	339	3.096092	AGACCACAAAAGGCAAGTGAAA	58.904	40.909	0.00	0.00	35.33	2.69
339	340	3.513515	AGACCACAAAAGGCAAGTGAAAA	59.486	39.130	0.00	0.00	35.33	2.29
340	341	3.860641	ACCACAAAAGGCAAGTGAAAAG	58.139	40.909	0.00	0.00	35.33	2.27
341	342	3.197265	CCACAAAAGGCAAGTGAAAAGG	58.803	45.455	0.00	0.00	35.33	3.11
342	343	3.369366	CCACAAAAGGCAAGTGAAAAGGT	60.369	43.478	0.00	0.00	35.33	3.50
343	344	3.618150	CACAAAAGGCAAGTGAAAAGGTG	59.382	43.478	0.00	0.00	35.33	4.00
344	345	2.602257	AAAGGCAAGTGAAAAGGTGC	57.398	45.000	0.00	0.00	36.24	5.01
345	346	0.385390	AAGGCAAGTGAAAAGGTGCG	59.615	50.000	0.00	0.00	37.89	5.34
346	347	1.661509	GGCAAGTGAAAAGGTGCGC	60.662	57.895	0.00	0.00	37.89	6.09
347	348	1.360192	GCAAGTGAAAAGGTGCGCT	59.640	52.632	9.73	0.00	0.00	5.92
348	349	0.661483	GCAAGTGAAAAGGTGCGCTC	60.661	55.000	9.73	4.47	0.00	5.03
349	350	0.040067	CAAGTGAAAAGGTGCGCTCC	60.040	55.000	20.71	20.71	0.00	4.70
350	351	1.172812	AAGTGAAAAGGTGCGCTCCC	61.173	55.000	24.18	16.17	0.00	4.30
351	352	2.282180	TGAAAAGGTGCGCTCCCC	60.282	61.111	24.18	13.58	0.00	4.81
352	353	2.034221	GAAAAGGTGCGCTCCCCT	59.966	61.111	24.18	15.65	0.00	4.79
353	354	1.298667	GAAAAGGTGCGCTCCCCTA	59.701	57.895	24.18	0.00	0.00	3.53
354	355	1.002502	AAAAGGTGCGCTCCCCTAC	60.003	57.895	24.18	4.70	0.00	3.18
355	356	2.479820	AAAAGGTGCGCTCCCCTACC	62.480	60.000	24.18	14.38	0.00	3.18
356	357	4.715130	AGGTGCGCTCCCCTACCA	62.715	66.667	24.18	0.00	35.66	3.25
357	358	4.162690	GGTGCGCTCCCCTACCAG	62.163	72.222	17.73	0.00	33.42	4.00
358	359	4.162690	GTGCGCTCCCCTACCAGG	62.163	72.222	9.73	0.00	34.30	4.45
361	362	4.162690	CGCTCCCCTACCAGGCAC	62.163	72.222	0.00	0.00	32.73	5.01
362	363	3.798511	GCTCCCCTACCAGGCACC	61.799	72.222	0.00	0.00	32.73	5.01
363	364	3.470888	CTCCCCTACCAGGCACCG	61.471	72.222	0.00	0.00	32.73	4.94
374	375	4.699522	GGCACCGCCGAACTTCCT	62.700	66.667	0.00	0.00	39.62	3.36
375	376	3.119096	GCACCGCCGAACTTCCTC	61.119	66.667	0.00	0.00	0.00	3.71
376	377	2.434359	CACCGCCGAACTTCCTCC	60.434	66.667	0.00	0.00	0.00	4.30
377	378	3.703127	ACCGCCGAACTTCCTCCC	61.703	66.667	0.00	0.00	0.00	4.30
378	379	4.468689	CCGCCGAACTTCCTCCCC	62.469	72.222	0.00	0.00	0.00	4.81
379	380	3.702048	CGCCGAACTTCCTCCCCA	61.702	66.667	0.00	0.00	0.00	4.96
380	381	2.269241	GCCGAACTTCCTCCCCAG	59.731	66.667	0.00	0.00	0.00	4.45
381	382	2.593956	GCCGAACTTCCTCCCCAGT	61.594	63.158	0.00	0.00	0.00	4.00
382	383	1.296715	CCGAACTTCCTCCCCAGTG	59.703	63.158	0.00	0.00	0.00	3.66
383	384	1.296715	CGAACTTCCTCCCCAGTGG	59.703	63.158	0.63	0.63	0.00	4.00
384	385	1.002011	GAACTTCCTCCCCAGTGGC	60.002	63.158	2.61	0.00	0.00	5.01
385	386	2.804828	GAACTTCCTCCCCAGTGGCG	62.805	65.000	2.61	0.00	0.00	5.69
386	387	4.785453	CTTCCTCCCCAGTGGCGC	62.785	72.222	2.61	0.00	0.00	6.53
411	412	4.157120	CGGCGTCCCAACCCCTAG	62.157	72.222	0.00	0.00	0.00	3.02
412	413	3.007323	GGCGTCCCAACCCCTAGT	61.007	66.667	0.00	0.00	0.00	2.57
413	414	2.267961	GCGTCCCAACCCCTAGTG	59.732	66.667	0.00	0.00	0.00	2.74
414	415	2.987125	CGTCCCAACCCCTAGTGG	59.013	66.667	0.00	0.00	0.00	4.00
415	416	1.916777	CGTCCCAACCCCTAGTGGT	60.917	63.158	0.00	0.00	41.55	4.16
417	418	0.327259	GTCCCAACCCCTAGTGGTTC	59.673	60.000	6.66	0.00	45.51	3.62
418	419	0.104356	TCCCAACCCCTAGTGGTTCA	60.104	55.000	6.66	0.00	45.51	3.18
419	420	0.328258	CCCAACCCCTAGTGGTTCAG	59.672	60.000	6.66	1.95	45.51	3.02
420	421	1.358152	CCAACCCCTAGTGGTTCAGA	58.642	55.000	6.66	0.00	45.51	3.27
421	422	1.702957	CCAACCCCTAGTGGTTCAGAA	59.297	52.381	6.66	0.00	45.51	3.02
422	423	2.107552	CCAACCCCTAGTGGTTCAGAAA	59.892	50.000	6.66	0.00	45.51	2.52
423	424	3.435890	CCAACCCCTAGTGGTTCAGAAAA	60.436	47.826	6.66	0.00	45.51	2.29
424	425	4.407365	CAACCCCTAGTGGTTCAGAAAAT	58.593	43.478	6.66	0.00	45.51	1.82
425	426	4.034285	ACCCCTAGTGGTTCAGAAAATG	57.966	45.455	0.00	0.00	33.91	2.32
426	427	3.397955	ACCCCTAGTGGTTCAGAAAATGT	59.602	43.478	0.00	0.00	33.91	2.71
427	428	4.010349	CCCCTAGTGGTTCAGAAAATGTC	58.990	47.826	0.00	0.00	0.00	3.06
428	429	4.506625	CCCCTAGTGGTTCAGAAAATGTCA	60.507	45.833	0.00	0.00	0.00	3.58
429	430	4.455877	CCCTAGTGGTTCAGAAAATGTCAC	59.544	45.833	0.00	0.00	0.00	3.67
430	431	4.152402	CCTAGTGGTTCAGAAAATGTCACG	59.848	45.833	0.00	0.00	33.76	4.35
431	432	3.541632	AGTGGTTCAGAAAATGTCACGT	58.458	40.909	0.00	0.00	33.76	4.49
432	433	3.560068	AGTGGTTCAGAAAATGTCACGTC	59.440	43.478	0.00	0.00	33.76	4.34
433	434	3.560068	GTGGTTCAGAAAATGTCACGTCT	59.440	43.478	0.00	0.00	0.00	4.18
434	435	4.748102	GTGGTTCAGAAAATGTCACGTCTA	59.252	41.667	0.00	0.00	0.00	2.59
435	436	5.408604	GTGGTTCAGAAAATGTCACGTCTAT	59.591	40.000	0.00	0.00	0.00	1.98
436	437	5.408299	TGGTTCAGAAAATGTCACGTCTATG	59.592	40.000	0.00	0.00	0.00	2.23
437	438	5.163854	GGTTCAGAAAATGTCACGTCTATGG	60.164	44.000	0.00	0.00	0.00	2.74
438	439	5.400066	TCAGAAAATGTCACGTCTATGGA	57.600	39.130	0.00	0.00	0.00	3.41
439	440	5.168569	TCAGAAAATGTCACGTCTATGGAC	58.831	41.667	0.00	0.00	38.97	4.02
449	450	2.865343	GTCTATGGACGATCACGGTT	57.135	50.000	0.00	0.00	44.46	4.44
450	451	2.460918	GTCTATGGACGATCACGGTTG	58.539	52.381	0.00	0.00	44.46	3.77
451	452	1.202371	TCTATGGACGATCACGGTTGC	60.202	52.381	0.00	0.00	44.46	4.17
452	453	0.821517	TATGGACGATCACGGTTGCT	59.178	50.000	0.00	0.00	44.46	3.91
453	454	0.460284	ATGGACGATCACGGTTGCTC	60.460	55.000	0.00	0.00	44.46	4.26
454	455	1.215647	GGACGATCACGGTTGCTCT	59.784	57.895	0.00	0.00	44.46	4.09
455	456	1.078759	GGACGATCACGGTTGCTCTG	61.079	60.000	0.00	0.00	44.46	3.35
456	457	1.687494	GACGATCACGGTTGCTCTGC	61.687	60.000	0.00	0.00	44.46	4.26
457	458	1.737735	CGATCACGGTTGCTCTGCA	60.738	57.895	0.00	0.00	34.40	4.41
458	459	1.690283	CGATCACGGTTGCTCTGCAG	61.690	60.000	7.63	7.63	36.43	4.41
459	460	0.390340	GATCACGGTTGCTCTGCAGA	60.390	55.000	17.19	17.19	40.61	4.26
460	461	0.251354	ATCACGGTTGCTCTGCAGAT	59.749	50.000	18.63	0.00	40.61	2.90
461	462	0.390340	TCACGGTTGCTCTGCAGATC	60.390	55.000	18.63	14.36	40.61	2.75
462	463	1.446792	ACGGTTGCTCTGCAGATCG	60.447	57.895	18.63	17.13	40.61	3.69
463	464	2.169789	CGGTTGCTCTGCAGATCGG	61.170	63.158	18.63	7.01	40.61	4.18
464	465	1.817099	GGTTGCTCTGCAGATCGGG	60.817	63.158	18.63	6.60	40.61	5.14
465	466	1.219124	GTTGCTCTGCAGATCGGGA	59.781	57.895	18.63	3.94	40.61	5.14
466	467	0.179062	GTTGCTCTGCAGATCGGGAT	60.179	55.000	18.63	0.00	40.61	3.85
467	468	1.069204	GTTGCTCTGCAGATCGGGATA	59.931	52.381	18.63	0.00	40.61	2.59
468	469	1.413118	TGCTCTGCAGATCGGGATAA	58.587	50.000	18.63	0.00	33.32	1.75
469	470	1.973515	TGCTCTGCAGATCGGGATAAT	59.026	47.619	18.63	0.00	33.32	1.28
470	471	2.289257	TGCTCTGCAGATCGGGATAATG	60.289	50.000	18.63	2.16	33.32	1.90
471	472	2.289320	GCTCTGCAGATCGGGATAATGT	60.289	50.000	18.63	0.00	0.00	2.71
472	473	3.324117	CTCTGCAGATCGGGATAATGTG	58.676	50.000	18.63	0.00	0.00	3.21
473	474	2.965147	TCTGCAGATCGGGATAATGTGA	59.035	45.455	13.74	0.00	0.00	3.58
474	475	3.580022	TCTGCAGATCGGGATAATGTGAT	59.420	43.478	13.74	0.00	0.00	3.06
475	476	4.040829	TCTGCAGATCGGGATAATGTGATT	59.959	41.667	13.74	0.00	0.00	2.57
476	477	4.067192	TGCAGATCGGGATAATGTGATTG	58.933	43.478	0.00	0.00	0.00	2.67
477	478	4.067896	GCAGATCGGGATAATGTGATTGT	58.932	43.478	0.00	0.00	0.00	2.71
478	479	4.083643	GCAGATCGGGATAATGTGATTGTG	60.084	45.833	0.00	0.00	0.00	3.33
479	480	5.299949	CAGATCGGGATAATGTGATTGTGA	58.700	41.667	0.00	0.00	0.00	3.58
480	481	5.759763	CAGATCGGGATAATGTGATTGTGAA	59.240	40.000	0.00	0.00	0.00	3.18
481	482	6.429078	CAGATCGGGATAATGTGATTGTGAAT	59.571	38.462	0.00	0.00	0.00	2.57
482	483	6.652481	AGATCGGGATAATGTGATTGTGAATC	59.348	38.462	0.00	0.00	38.40	2.52
483	484	5.679601	TCGGGATAATGTGATTGTGAATCA	58.320	37.500	0.00	0.00	45.19	2.57
491	492	3.786368	TGATTGTGAATCAGTGGTGGA	57.214	42.857	0.00	0.00	42.69	4.02
492	493	3.678289	TGATTGTGAATCAGTGGTGGAG	58.322	45.455	0.00	0.00	42.69	3.86
493	494	1.896220	TTGTGAATCAGTGGTGGAGC	58.104	50.000	0.00	0.00	0.00	4.70
494	495	1.059098	TGTGAATCAGTGGTGGAGCT	58.941	50.000	0.00	0.00	0.00	4.09
495	496	2.256306	TGTGAATCAGTGGTGGAGCTA	58.744	47.619	0.00	0.00	0.00	3.32
496	497	2.234661	TGTGAATCAGTGGTGGAGCTAG	59.765	50.000	0.00	0.00	0.00	3.42
497	498	1.833630	TGAATCAGTGGTGGAGCTAGG	59.166	52.381	0.00	0.00	0.00	3.02
498	499	0.543749	AATCAGTGGTGGAGCTAGGC	59.456	55.000	0.00	0.00	0.00	3.93
499	500	1.341156	ATCAGTGGTGGAGCTAGGCC	61.341	60.000	0.00	0.00	0.00	5.19
500	501	3.077556	AGTGGTGGAGCTAGGCCG	61.078	66.667	0.00	0.00	0.00	6.13
501	502	4.162690	GTGGTGGAGCTAGGCCGG	62.163	72.222	0.00	0.00	0.00	6.13
504	505	3.866582	GTGGAGCTAGGCCGGCAT	61.867	66.667	30.85	26.24	0.00	4.40
505	506	3.550431	TGGAGCTAGGCCGGCATC	61.550	66.667	30.85	16.66	0.00	3.91
506	507	3.550431	GGAGCTAGGCCGGCATCA	61.550	66.667	30.85	11.47	0.00	3.07
507	508	2.030262	GAGCTAGGCCGGCATCAG	59.970	66.667	30.85	21.64	0.00	2.90
508	509	3.527775	GAGCTAGGCCGGCATCAGG	62.528	68.421	30.85	16.09	0.00	3.86
526	527	4.338710	CCCCGGCCCGTCTTTCAA	62.339	66.667	0.85	0.00	0.00	2.69
527	528	2.746277	CCCGGCCCGTCTTTCAAG	60.746	66.667	0.85	0.00	0.00	3.02
528	529	2.345991	CCGGCCCGTCTTTCAAGA	59.654	61.111	0.85	0.00	0.00	3.02
529	530	1.302192	CCGGCCCGTCTTTCAAGAA	60.302	57.895	0.85	0.00	36.68	2.52
530	531	0.676782	CCGGCCCGTCTTTCAAGAAT	60.677	55.000	0.85	0.00	36.68	2.40
531	532	0.727398	CGGCCCGTCTTTCAAGAATC	59.273	55.000	0.00	0.00	36.68	2.52
532	533	1.821216	GGCCCGTCTTTCAAGAATCA	58.179	50.000	0.00	0.00	36.68	2.57
533	534	1.740025	GGCCCGTCTTTCAAGAATCAG	59.260	52.381	0.00	0.00	36.68	2.90
534	535	1.740025	GCCCGTCTTTCAAGAATCAGG	59.260	52.381	0.00	0.00	36.68	3.86
535	536	2.876079	GCCCGTCTTTCAAGAATCAGGT	60.876	50.000	0.00	0.00	36.68	4.00
536	537	3.618997	GCCCGTCTTTCAAGAATCAGGTA	60.619	47.826	0.00	0.00	36.68	3.08
537	538	4.575885	CCCGTCTTTCAAGAATCAGGTAA	58.424	43.478	0.00	0.00	36.68	2.85
538	539	4.392138	CCCGTCTTTCAAGAATCAGGTAAC	59.608	45.833	0.00	0.00	36.68	2.50
539	540	4.392138	CCGTCTTTCAAGAATCAGGTAACC	59.608	45.833	0.00	0.00	36.68	2.85
540	541	4.994852	CGTCTTTCAAGAATCAGGTAACCA	59.005	41.667	0.00	0.00	36.68	3.67
541	542	5.468746	CGTCTTTCAAGAATCAGGTAACCAA	59.531	40.000	0.00	0.00	36.68	3.67
542	543	6.017440	CGTCTTTCAAGAATCAGGTAACCAAA	60.017	38.462	0.00	0.00	36.68	3.28
543	544	7.468084	CGTCTTTCAAGAATCAGGTAACCAAAA	60.468	37.037	0.00	0.00	36.68	2.44
544	545	7.862873	GTCTTTCAAGAATCAGGTAACCAAAAG	59.137	37.037	0.00	0.00	36.68	2.27
545	546	7.777910	TCTTTCAAGAATCAGGTAACCAAAAGA	59.222	33.333	0.00	0.00	30.73	2.52
546	547	8.477419	TTTCAAGAATCAGGTAACCAAAAGAT	57.523	30.769	0.00	0.00	37.17	2.40
547	548	7.452880	TCAAGAATCAGGTAACCAAAAGATG	57.547	36.000	0.00	0.00	37.17	2.90
548	549	7.004086	TCAAGAATCAGGTAACCAAAAGATGT	58.996	34.615	0.00	0.00	37.17	3.06
549	550	7.174946	TCAAGAATCAGGTAACCAAAAGATGTC	59.825	37.037	0.00	0.00	37.17	3.06
550	551	6.542821	AGAATCAGGTAACCAAAAGATGTCA	58.457	36.000	0.00	0.00	37.17	3.58
551	552	6.431234	AGAATCAGGTAACCAAAAGATGTCAC	59.569	38.462	0.00	0.00	37.17	3.67
552	553	5.304686	TCAGGTAACCAAAAGATGTCACT	57.695	39.130	0.00	0.00	37.17	3.41
553	554	5.690865	TCAGGTAACCAAAAGATGTCACTT	58.309	37.500	0.00	0.00	37.17	3.16
554	555	5.763204	TCAGGTAACCAAAAGATGTCACTTC	59.237	40.000	0.00	0.00	37.17	3.01
555	556	4.755123	AGGTAACCAAAAGATGTCACTTCG	59.245	41.667	0.00	0.00	37.17	3.79
556	557	4.083484	GGTAACCAAAAGATGTCACTTCGG	60.083	45.833	0.00	0.00	0.00	4.30
557	558	2.504367	ACCAAAAGATGTCACTTCGGG	58.496	47.619	0.00	0.00	31.10	5.14
558	559	1.200020	CCAAAAGATGTCACTTCGGGC	59.800	52.381	0.00	0.00	0.00	6.13
559	560	2.154462	CAAAAGATGTCACTTCGGGCT	58.846	47.619	0.00	0.00	0.00	5.19
560	561	3.334691	CAAAAGATGTCACTTCGGGCTA	58.665	45.455	0.00	0.00	0.00	3.93
561	562	2.674796	AAGATGTCACTTCGGGCTAC	57.325	50.000	0.00	0.00	0.00	3.58
562	563	1.557099	AGATGTCACTTCGGGCTACA	58.443	50.000	0.00	0.00	0.00	2.74
563	564	1.478510	AGATGTCACTTCGGGCTACAG	59.521	52.381	0.00	0.00	0.00	2.74
564	565	0.108138	ATGTCACTTCGGGCTACAGC	60.108	55.000	0.00	0.00	41.14	4.40
591	592	2.352805	CCACTTGGCCAGGTCCTC	59.647	66.667	19.17	0.00	0.00	3.71
592	593	2.352805	CACTTGGCCAGGTCCTCC	59.647	66.667	19.17	0.00	0.00	4.30
593	594	2.208349	ACTTGGCCAGGTCCTCCT	59.792	61.111	16.01	0.00	46.37	3.69
604	605	3.214696	AGGTCCTCCTGTTTGTCTTTG	57.785	47.619	0.00	0.00	43.33	2.77
605	606	1.609072	GGTCCTCCTGTTTGTCTTTGC	59.391	52.381	0.00	0.00	0.00	3.68
606	607	2.297701	GTCCTCCTGTTTGTCTTTGCA	58.702	47.619	0.00	0.00	0.00	4.08
607	608	2.887152	GTCCTCCTGTTTGTCTTTGCAT	59.113	45.455	0.00	0.00	0.00	3.96
608	609	2.886523	TCCTCCTGTTTGTCTTTGCATG	59.113	45.455	0.00	0.00	0.00	4.06
609	610	2.608752	CCTCCTGTTTGTCTTTGCATGC	60.609	50.000	11.82	11.82	0.00	4.06
610	611	2.030371	TCCTGTTTGTCTTTGCATGCA	58.970	42.857	18.46	18.46	0.00	3.96
611	612	2.629137	TCCTGTTTGTCTTTGCATGCAT	59.371	40.909	23.37	0.00	0.00	3.96
612	613	2.734606	CCTGTTTGTCTTTGCATGCATG	59.265	45.455	23.37	22.70	0.00	4.06
628	629	3.360249	GCATGCTTAGGTAAATGCAGG	57.640	47.619	11.37	0.00	43.84	4.85
629	630	2.951642	GCATGCTTAGGTAAATGCAGGA	59.048	45.455	11.37	0.00	43.84	3.86
630	631	3.243201	GCATGCTTAGGTAAATGCAGGAC	60.243	47.826	11.37	0.00	43.84	3.85
631	632	3.712016	TGCTTAGGTAAATGCAGGACA	57.288	42.857	0.00	0.00	0.00	4.02
632	633	4.235079	TGCTTAGGTAAATGCAGGACAT	57.765	40.909	0.00	0.00	42.30	3.06
633	634	3.947196	TGCTTAGGTAAATGCAGGACATG	59.053	43.478	0.00	0.00	39.60	3.21
634	635	4.199310	GCTTAGGTAAATGCAGGACATGA	58.801	43.478	0.00	0.00	39.60	3.07
635	636	4.640201	GCTTAGGTAAATGCAGGACATGAA	59.360	41.667	0.00	0.00	39.60	2.57
636	637	5.449177	GCTTAGGTAAATGCAGGACATGAAC	60.449	44.000	0.00	0.00	39.60	3.18
637	638	3.356290	AGGTAAATGCAGGACATGAACC	58.644	45.455	0.00	2.33	41.54	3.62
638	639	3.088532	GGTAAATGCAGGACATGAACCA	58.911	45.455	0.00	0.00	41.16	3.67
639	640	3.701040	GGTAAATGCAGGACATGAACCAT	59.299	43.478	0.00	0.00	41.16	3.55
640	641	4.160252	GGTAAATGCAGGACATGAACCATT	59.840	41.667	0.00	0.00	41.16	3.16
641	642	3.880047	AATGCAGGACATGAACCATTG	57.120	42.857	0.00	0.00	39.60	2.82
642	643	0.889994	TGCAGGACATGAACCATTGC	59.110	50.000	0.00	9.83	31.91	3.56
643	644	1.180029	GCAGGACATGAACCATTGCT	58.820	50.000	0.00	0.00	0.00	3.91
644	645	1.547372	GCAGGACATGAACCATTGCTT	59.453	47.619	0.00	0.00	0.00	3.91
645	646	2.028748	GCAGGACATGAACCATTGCTTT	60.029	45.455	0.00	0.00	0.00	3.51
646	647	3.581755	CAGGACATGAACCATTGCTTTG	58.418	45.455	0.00	0.00	0.00	2.77
647	648	3.256383	CAGGACATGAACCATTGCTTTGA	59.744	43.478	0.00	0.00	0.00	2.69
648	649	4.081862	CAGGACATGAACCATTGCTTTGAT	60.082	41.667	0.00	0.00	0.00	2.57
649	650	4.159135	AGGACATGAACCATTGCTTTGATC	59.841	41.667	0.00	0.00	0.00	2.92
650	651	4.427312	GACATGAACCATTGCTTTGATCC	58.573	43.478	0.00	0.00	0.00	3.36
651	652	4.091549	ACATGAACCATTGCTTTGATCCT	58.908	39.130	0.00	0.00	0.00	3.24
652	653	5.263599	ACATGAACCATTGCTTTGATCCTA	58.736	37.500	0.00	0.00	0.00	2.94
653	654	5.126061	ACATGAACCATTGCTTTGATCCTAC	59.874	40.000	0.00	0.00	0.00	3.18
654	655	4.922206	TGAACCATTGCTTTGATCCTACT	58.078	39.130	0.00	0.00	0.00	2.57
655	656	4.943705	TGAACCATTGCTTTGATCCTACTC	59.056	41.667	0.00	0.00	0.00	2.59
656	657	4.851639	ACCATTGCTTTGATCCTACTCT	57.148	40.909	0.00	0.00	0.00	3.24
657	658	5.957771	ACCATTGCTTTGATCCTACTCTA	57.042	39.130	0.00	0.00	0.00	2.43
658	659	5.675538	ACCATTGCTTTGATCCTACTCTAC	58.324	41.667	0.00	0.00	0.00	2.59
659	660	5.426833	ACCATTGCTTTGATCCTACTCTACT	59.573	40.000	0.00	0.00	0.00	2.57
660	661	6.611642	ACCATTGCTTTGATCCTACTCTACTA	59.388	38.462	0.00	0.00	0.00	1.82
661	662	7.125811	ACCATTGCTTTGATCCTACTCTACTAA	59.874	37.037	0.00	0.00	0.00	2.24
662	663	8.153550	CCATTGCTTTGATCCTACTCTACTAAT	58.846	37.037	0.00	0.00	0.00	1.73
663	664	8.986847	CATTGCTTTGATCCTACTCTACTAATG	58.013	37.037	0.00	0.00	0.00	1.90
664	665	7.055667	TGCTTTGATCCTACTCTACTAATGG	57.944	40.000	0.00	0.00	0.00	3.16
665	666	6.611642	TGCTTTGATCCTACTCTACTAATGGT	59.388	38.462	0.00	0.00	0.00	3.55
666	667	6.926272	GCTTTGATCCTACTCTACTAATGGTG	59.074	42.308	0.00	0.00	0.00	4.17
667	668	6.978674	TTGATCCTACTCTACTAATGGTGG	57.021	41.667	0.00	0.00	0.00	4.61
668	669	6.275692	TGATCCTACTCTACTAATGGTGGA	57.724	41.667	0.00	0.00	34.30	4.02
669	670	6.864421	TGATCCTACTCTACTAATGGTGGAT	58.136	40.000	0.00	0.00	34.95	3.41
670	671	6.721668	TGATCCTACTCTACTAATGGTGGATG	59.278	42.308	0.00	0.00	34.95	3.51
671	672	5.394738	TCCTACTCTACTAATGGTGGATGG	58.605	45.833	0.00	0.00	34.95	3.51
672	673	5.135533	TCCTACTCTACTAATGGTGGATGGA	59.864	44.000	0.00	0.00	34.95	3.41
673	674	5.839063	CCTACTCTACTAATGGTGGATGGAA	59.161	44.000	0.00	0.00	34.95	3.53
674	675	6.326583	CCTACTCTACTAATGGTGGATGGAAA	59.673	42.308	0.00	0.00	34.95	3.13
675	676	6.831664	ACTCTACTAATGGTGGATGGAAAT	57.168	37.500	0.00	0.00	34.95	2.17
676	677	7.213178	ACTCTACTAATGGTGGATGGAAATT	57.787	36.000	0.00	0.00	34.95	1.82
677	678	8.331931	ACTCTACTAATGGTGGATGGAAATTA	57.668	34.615	0.00	0.00	34.95	1.40
678	679	8.778059	ACTCTACTAATGGTGGATGGAAATTAA	58.222	33.333	0.00	0.00	34.95	1.40
679	680	9.277783	CTCTACTAATGGTGGATGGAAATTAAG	57.722	37.037	0.00	0.00	34.95	1.85
680	681	6.715347	ACTAATGGTGGATGGAAATTAAGC	57.285	37.500	0.00	0.00	0.00	3.09
681	682	6.194235	ACTAATGGTGGATGGAAATTAAGCA	58.806	36.000	0.00	0.00	0.00	3.91
682	683	6.840705	ACTAATGGTGGATGGAAATTAAGCAT	59.159	34.615	0.00	0.00	0.00	3.79
683	684	5.540400	ATGGTGGATGGAAATTAAGCATG	57.460	39.130	0.00	0.00	0.00	4.06
684	685	3.132646	TGGTGGATGGAAATTAAGCATGC	59.867	43.478	10.51	10.51	0.00	4.06
685	686	3.374745	GTGGATGGAAATTAAGCATGCG	58.625	45.455	13.01	0.00	0.00	4.73
686	687	2.223782	TGGATGGAAATTAAGCATGCGC	60.224	45.455	13.01	0.00	38.99	6.09
687	688	2.046313	GATGGAAATTAAGCATGCGCG	58.954	47.619	13.01	0.00	45.49	6.86
688	689	0.100325	TGGAAATTAAGCATGCGCGG	59.900	50.000	13.01	0.00	45.49	6.46
689	690	1.208642	GGAAATTAAGCATGCGCGGC	61.209	55.000	13.01	15.21	45.49	6.53
690	691	0.248621	GAAATTAAGCATGCGCGGCT	60.249	50.000	19.24	19.24	45.49	5.52
698	699	2.816958	ATGCGCGGCTGAACAGAG	60.817	61.111	8.83	0.31	0.00	3.35
726	727	1.154205	CCCGATGCATTCACCGAGTC	61.154	60.000	0.00	0.00	28.14	3.36
730	731	0.107508	ATGCATTCACCGAGTCCCTG	60.108	55.000	0.00	0.00	0.00	4.45
759	765	0.263765	AGAATCCAGGGTAGGGCGTA	59.736	55.000	0.00	0.00	0.00	4.42
762	768	1.957822	ATCCAGGGTAGGGCGTAGGT	61.958	60.000	0.00	0.00	0.00	3.08
783	789	2.625823	CGGCAATGGTGTTTCGCCT	61.626	57.895	0.00	0.00	40.72	5.52
796	802	2.715532	TTCGCCTGTCCTGTCAGTGC	62.716	60.000	0.00	0.00	34.02	4.40
894	900	2.750948	GCAATGCAATGATCCATCCAC	58.249	47.619	5.79	0.00	0.00	4.02
947	953	2.271800	CGGATAAATATCGGCTGCTCC	58.728	52.381	0.00	0.00	33.52	4.70
963	969	3.441290	CCGTCGTCTCCTTCGCCT	61.441	66.667	0.00	0.00	0.00	5.52
964	970	2.100603	CGTCGTCTCCTTCGCCTC	59.899	66.667	0.00	0.00	0.00	4.70
965	971	2.100603	GTCGTCTCCTTCGCCTCG	59.899	66.667	0.00	0.00	0.00	4.63
966	972	2.046604	TCGTCTCCTTCGCCTCGA	60.047	61.111	0.00	0.00	0.00	4.04
998	1004	0.605319	ACTTCGCCAAGATCCGCAAA	60.605	50.000	0.00	0.00	33.34	3.68
1003	1009	1.382522	GCCAAGATCCGCAAAGATGA	58.617	50.000	0.00	0.00	0.00	2.92
1012	1018	1.825285	CGCAAAGATGATCCGAGCGG	61.825	60.000	12.98	1.74	40.00	5.52
1036	1042	1.735559	GTCGTCACCAGGTAACGCC	60.736	63.158	10.83	0.00	46.39	5.68
1045	1051	4.334118	GGTAACGCCGGGGTTGGT	62.334	66.667	38.54	21.25	0.00	3.67
1062	1068	1.623973	GGTTTCGGAAGAGAACGCCG	61.624	60.000	0.00	0.00	46.08	6.46
1096	1117	3.437049	GCTAATCTTGGTCTTGGTGTGTC	59.563	47.826	0.00	0.00	0.00	3.67
1097	1118	3.864789	AATCTTGGTCTTGGTGTGTCT	57.135	42.857	0.00	0.00	0.00	3.41
1451	1484	3.119245	GCAAGTTGGACATCATGCTCAAT	60.119	43.478	4.75	0.00	0.00	2.57
1886	5137	4.492160	GAGCCGGACGACATCGCA	62.492	66.667	5.05	0.00	44.43	5.10
2078	5338	6.211587	ACGTAGTAGTATTGTATTGCACCA	57.788	37.500	0.00	0.00	41.94	4.17
2079	5339	6.038356	ACGTAGTAGTATTGTATTGCACCAC	58.962	40.000	0.00	0.00	41.94	4.16
2081	5355	4.777463	AGTAGTATTGTATTGCACCACCC	58.223	43.478	0.00	0.00	0.00	4.61
2205	5504	2.233605	TACGTTGACCCCATGCGGAG	62.234	60.000	2.64	0.00	0.00	4.63
2206	5505	2.351276	GTTGACCCCATGCGGAGT	59.649	61.111	2.64	0.00	0.00	3.85
2207	5506	1.600107	GTTGACCCCATGCGGAGTA	59.400	57.895	2.64	0.00	0.00	2.59
2216	5520	2.029828	CCCATGCGGAGTACTAGATGAC	60.030	54.545	0.00	0.00	0.00	3.06
2876	8461	7.697352	TTTAAAATGCACAGAGTGATTTGTG	57.303	32.000	0.58	0.50	45.70	3.33
2880	8465	2.224499	TGCACAGAGTGATTTGTGGCTA	60.224	45.455	0.58	0.00	43.71	3.93
2882	8467	3.668447	CACAGAGTGATTTGTGGCTACT	58.332	45.455	0.64	0.00	40.69	2.57
2883	8468	3.681897	CACAGAGTGATTTGTGGCTACTC	59.318	47.826	0.64	0.00	40.69	2.59
2884	8469	3.324846	ACAGAGTGATTTGTGGCTACTCA	59.675	43.478	0.64	0.00	40.05	3.41
2886	8471	3.580458	AGAGTGATTTGTGGCTACTCACT	59.420	43.478	19.21	19.21	46.78	3.41
2887	8472	3.668447	AGTGATTTGTGGCTACTCACTG	58.332	45.455	18.68	0.00	43.55	3.66
2888	8473	3.071602	AGTGATTTGTGGCTACTCACTGT	59.928	43.478	18.68	1.23	43.55	3.55
2890	8475	2.254546	TTTGTGGCTACTCACTGTGG	57.745	50.000	8.11	1.42	38.40	4.17
2891	8476	1.128200	TTGTGGCTACTCACTGTGGT	58.872	50.000	8.11	7.47	38.40	4.16
2892	8477	0.392706	TGTGGCTACTCACTGTGGTG	59.607	55.000	8.11	4.21	44.23	4.17
2893	8478	0.951040	GTGGCTACTCACTGTGGTGC	60.951	60.000	8.11	10.33	42.72	5.01
2895	8480	1.738099	GCTACTCACTGTGGTGCCG	60.738	63.158	8.11	0.83	42.72	5.69
2896	8481	1.964448	CTACTCACTGTGGTGCCGA	59.036	57.895	8.11	0.00	42.72	5.54
2897	8482	0.109086	CTACTCACTGTGGTGCCGAG	60.109	60.000	8.11	0.00	42.72	4.63
2898	8483	0.826256	TACTCACTGTGGTGCCGAGT	60.826	55.000	8.11	5.46	42.72	4.18
2899	8484	0.826256	ACTCACTGTGGTGCCGAGTA	60.826	55.000	8.11	0.00	42.72	2.59
2901	8486	1.110518	TCACTGTGGTGCCGAGTACA	61.111	55.000	8.11	0.00	42.72	2.90
2902	8487	0.944311	CACTGTGGTGCCGAGTACAC	60.944	60.000	0.00	0.00	36.61	2.90
2903	8488	1.365999	CTGTGGTGCCGAGTACACA	59.634	57.895	0.00	0.00	41.11	3.72
2904	8489	0.037326	CTGTGGTGCCGAGTACACAT	60.037	55.000	0.00	0.00	42.27	3.21
2905	8490	0.394938	TGTGGTGCCGAGTACACATT	59.605	50.000	0.00	0.00	38.76	2.71
2907	8492	2.235155	TGTGGTGCCGAGTACACATTAT	59.765	45.455	0.00	0.00	38.76	1.28
2909	8494	2.210116	GGTGCCGAGTACACATTATGG	58.790	52.381	0.00	0.00	39.87	2.74
2911	8496	3.123804	GTGCCGAGTACACATTATGGAG	58.876	50.000	0.00	0.00	37.96	3.86
2912	8497	3.028130	TGCCGAGTACACATTATGGAGA	58.972	45.455	0.00	0.00	0.00	3.71
2914	8499	3.629058	CCGAGTACACATTATGGAGACG	58.371	50.000	0.00	0.00	0.00	4.18
2915	8500	3.066342	CCGAGTACACATTATGGAGACGT	59.934	47.826	0.00	0.00	0.00	4.34
2917	8502	3.782046	AGTACACATTATGGAGACGTGC	58.218	45.455	0.00	0.00	0.00	5.34
2918	8503	2.760634	ACACATTATGGAGACGTGCA	57.239	45.000	0.00	0.00	0.00	4.57
2920	8505	3.609853	ACACATTATGGAGACGTGCAAT	58.390	40.909	0.00	0.00	0.00	3.56
2921	8506	4.009675	ACACATTATGGAGACGTGCAATT	58.990	39.130	0.00	0.00	0.00	2.32
2922	8507	4.094887	ACACATTATGGAGACGTGCAATTC	59.905	41.667	0.00	0.00	0.00	2.17
2923	8508	4.333649	CACATTATGGAGACGTGCAATTCT	59.666	41.667	0.00	0.00	0.00	2.40
2924	8509	4.333649	ACATTATGGAGACGTGCAATTCTG	59.666	41.667	0.00	0.00	0.00	3.02
2925	8510	2.479566	ATGGAGACGTGCAATTCTGT	57.520	45.000	0.00	0.00	0.00	3.41
2926	8511	1.795768	TGGAGACGTGCAATTCTGTC	58.204	50.000	0.00	0.34	0.00	3.51
2927	8512	1.344438	TGGAGACGTGCAATTCTGTCT	59.656	47.619	0.00	5.01	43.95	3.41
2928	8513	1.728971	GGAGACGTGCAATTCTGTCTG	59.271	52.381	10.37	0.00	41.50	3.51
2929	8514	2.408050	GAGACGTGCAATTCTGTCTGT	58.592	47.619	10.37	0.00	41.50	3.41
2930	8515	2.138320	AGACGTGCAATTCTGTCTGTG	58.862	47.619	0.00	0.00	40.03	3.66
2931	8516	1.867233	GACGTGCAATTCTGTCTGTGT	59.133	47.619	0.00	0.00	0.00	3.72
2932	8517	1.867233	ACGTGCAATTCTGTCTGTGTC	59.133	47.619	0.00	0.00	0.00	3.67
2934	8519	2.156504	CGTGCAATTCTGTCTGTGTCTC	59.843	50.000	0.00	0.00	0.00	3.36
2936	8521	4.560128	GTGCAATTCTGTCTGTGTCTCTA	58.440	43.478	0.00	0.00	0.00	2.43
2938	8523	5.063186	GTGCAATTCTGTCTGTGTCTCTATG	59.937	44.000	0.00	0.00	0.00	2.23
2939	8524	5.174395	GCAATTCTGTCTGTGTCTCTATGT	58.826	41.667	0.00	0.00	0.00	2.29
2940	8525	5.063186	GCAATTCTGTCTGTGTCTCTATGTG	59.937	44.000	0.00	0.00	0.00	3.21
2942	8527	3.157087	TCTGTCTGTGTCTCTATGTGCA	58.843	45.455	0.00	0.00	0.00	4.57
2943	8528	3.766051	TCTGTCTGTGTCTCTATGTGCAT	59.234	43.478	0.00	0.00	0.00	3.96
2944	8529	3.853475	TGTCTGTGTCTCTATGTGCATG	58.147	45.455	0.00	0.00	0.00	4.06
2946	8531	2.234414	TCTGTGTCTCTATGTGCATGCA	59.766	45.455	18.46	18.46	0.00	3.96
2947	8532	2.349590	TGTGTCTCTATGTGCATGCAC	58.650	47.619	38.00	38.00	46.33	4.57
2948	8533	2.027837	TGTGTCTCTATGTGCATGCACT	60.028	45.455	41.43	30.70	46.30	4.40
2949	8534	3.195396	TGTGTCTCTATGTGCATGCACTA	59.805	43.478	41.43	30.55	46.30	2.74
2950	8535	3.801050	GTGTCTCTATGTGCATGCACTAG	59.199	47.826	41.43	35.32	46.30	2.57
2951	8536	3.181472	TGTCTCTATGTGCATGCACTAGG	60.181	47.826	41.43	30.82	46.30	3.02
2952	8537	3.068732	GTCTCTATGTGCATGCACTAGGA	59.931	47.826	41.43	32.50	46.30	2.94
2953	8538	3.320256	TCTCTATGTGCATGCACTAGGAG	59.680	47.826	41.43	37.18	46.30	3.69
2955	8540	0.465097	ATGTGCATGCACTAGGAGGC	60.465	55.000	41.43	20.54	46.30	4.70
2956	8541	2.176273	GTGCATGCACTAGGAGGCG	61.176	63.158	37.48	0.00	46.36	5.52
2958	8543	1.070445	GCATGCACTAGGAGGCGAT	59.930	57.895	14.21	0.00	32.17	4.58
2959	8544	0.318441	GCATGCACTAGGAGGCGATA	59.682	55.000	14.21	0.00	32.17	2.92
2961	8546	1.889170	CATGCACTAGGAGGCGATAGA	59.111	52.381	0.00	0.00	39.76	1.98
2962	8547	2.294449	TGCACTAGGAGGCGATAGAT	57.706	50.000	0.00	0.00	39.76	1.98
2980	8565	8.608102	CGATAGATCGGACTATATTCAACAAG	57.392	38.462	3.95	0.00	45.93	3.16
2981	8566	8.237949	CGATAGATCGGACTATATTCAACAAGT	58.762	37.037	3.95	0.00	45.93	3.16
2982	8567	9.562583	GATAGATCGGACTATATTCAACAAGTC	57.437	37.037	0.00	0.00	38.08	3.01
2983	8568	6.439599	AGATCGGACTATATTCAACAAGTCG	58.560	40.000	0.00	0.00	39.39	4.18
2984	8569	4.928601	TCGGACTATATTCAACAAGTCGG	58.071	43.478	0.00	0.00	39.39	4.79
2985	8570	4.049186	CGGACTATATTCAACAAGTCGGG	58.951	47.826	0.00	0.00	39.39	5.14
2986	8571	4.202080	CGGACTATATTCAACAAGTCGGGA	60.202	45.833	0.00	0.00	39.39	5.14
2991	8576	1.790755	TTCAACAAGTCGGGATGTCG	58.209	50.000	0.00	0.00	0.00	4.35
2992	8577	0.963225	TCAACAAGTCGGGATGTCGA	59.037	50.000	0.00	0.00	36.76	4.20
2998	8583	3.837578	TCGGGATGTCGACCTAGC	58.162	61.111	14.12	0.00	33.92	3.42
2999	8584	1.077285	TCGGGATGTCGACCTAGCA	60.077	57.895	14.12	0.00	33.92	3.49
3000	8585	0.681887	TCGGGATGTCGACCTAGCAA	60.682	55.000	14.12	0.00	33.92	3.91
3001	8586	0.389391	CGGGATGTCGACCTAGCAAT	59.611	55.000	14.12	0.00	0.00	3.56
3002	8587	1.869754	CGGGATGTCGACCTAGCAATG	60.870	57.143	14.12	0.00	0.00	2.82

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	0.897863	CCATTCCGGGCAGGTTGAAA	60.898	55.000	0.00	0.00	41.99	2.69
3	4	2.046285	GTCCATTCCGGGCAGGTTG	61.046	63.158	0.00	3.15	40.18	3.77
4	5	2.355115	GTCCATTCCGGGCAGGTT	59.645	61.111	0.00	0.00	40.18	3.50
9	10	3.140814	GCCTTGTCCATTCCGGGC	61.141	66.667	0.00	0.00	41.21	6.13
10	11	2.440247	GGCCTTGTCCATTCCGGG	60.440	66.667	0.00	0.00	34.36	5.73
11	12	1.076777	ATGGCCTTGTCCATTCCGG	60.077	57.895	3.32	0.00	44.04	5.14
12	13	4.664062	ATGGCCTTGTCCATTCCG	57.336	55.556	3.32	0.00	44.04	4.30
17	18	2.354729	CCCGAATGGCCTTGTCCA	59.645	61.111	3.32	0.00	40.97	4.02
26	27	0.465097	AAGAGCAGATGCCCGAATGG	60.465	55.000	0.14	0.00	43.38	3.16
27	28	0.661552	CAAGAGCAGATGCCCGAATG	59.338	55.000	0.14	0.00	43.38	2.67
28	29	0.543277	TCAAGAGCAGATGCCCGAAT	59.457	50.000	0.14	0.00	43.38	3.34
29	30	0.543277	ATCAAGAGCAGATGCCCGAA	59.457	50.000	0.14	0.00	43.38	4.30
30	31	0.179065	CATCAAGAGCAGATGCCCGA	60.179	55.000	0.14	0.00	43.38	5.14
31	32	0.463295	ACATCAAGAGCAGATGCCCG	60.463	55.000	0.14	0.00	45.19	6.13
32	33	1.022735	CACATCAAGAGCAGATGCCC	58.977	55.000	0.14	0.00	45.19	5.36
33	34	0.381089	GCACATCAAGAGCAGATGCC	59.619	55.000	0.14	0.00	45.19	4.40
34	35	1.380524	AGCACATCAAGAGCAGATGC	58.619	50.000	0.00	0.00	45.19	3.91
35	36	5.511571	CAAATAGCACATCAAGAGCAGATG	58.488	41.667	0.00	0.00	46.38	2.90
36	37	4.036498	GCAAATAGCACATCAAGAGCAGAT	59.964	41.667	0.00	0.00	44.79	2.90
37	38	3.376234	GCAAATAGCACATCAAGAGCAGA	59.624	43.478	0.00	0.00	44.79	4.26
38	39	3.692576	GCAAATAGCACATCAAGAGCAG	58.307	45.455	0.00	0.00	44.79	4.24
39	40	3.770263	GCAAATAGCACATCAAGAGCA	57.230	42.857	0.00	0.00	44.79	4.26
50	51	7.040201	ATTCTTGTGAAAAGAGAGCAAATAGCA	60.040	33.333	0.00	0.00	39.86	3.49
51	52	6.246420	TCTTGTGAAAAGAGAGCAAATAGC	57.754	37.500	0.00	0.00	46.19	2.97
56	57	9.683069	GATTTAATTCTTGTGAAAAGAGAGCAA	57.317	29.630	0.00	0.00	35.63	3.91
57	58	8.849168	TGATTTAATTCTTGTGAAAAGAGAGCA	58.151	29.630	0.00	0.00	35.63	4.26
58	59	9.683069	TTGATTTAATTCTTGTGAAAAGAGAGC	57.317	29.630	0.00	0.00	35.63	4.09
65	66	9.677567	GCTACACTTGATTTAATTCTTGTGAAA	57.322	29.630	19.72	11.83	35.63	2.69
66	67	8.296713	GGCTACACTTGATTTAATTCTTGTGAA	58.703	33.333	19.72	0.00	36.54	3.18
67	68	7.665559	AGGCTACACTTGATTTAATTCTTGTGA	59.334	33.333	19.72	9.87	0.00	3.58
68	69	7.820648	AGGCTACACTTGATTTAATTCTTGTG	58.179	34.615	15.14	15.14	0.00	3.33
69	70	8.947115	GTAGGCTACACTTGATTTAATTCTTGT	58.053	33.333	19.55	3.21	0.00	3.16
70	71	8.946085	TGTAGGCTACACTTGATTTAATTCTTG	58.054	33.333	22.96	0.00	32.89	3.02
71	72	9.686683	ATGTAGGCTACACTTGATTTAATTCTT	57.313	29.630	28.40	5.05	42.23	2.52
72	73	9.113838	CATGTAGGCTACACTTGATTTAATTCT	57.886	33.333	28.40	5.70	42.23	2.40
73	74	9.109393	TCATGTAGGCTACACTTGATTTAATTC	57.891	33.333	28.40	0.00	42.23	2.17
74	75	9.632638	ATCATGTAGGCTACACTTGATTTAATT	57.367	29.630	26.73	13.01	42.23	1.40
75	76	9.277783	GATCATGTAGGCTACACTTGATTTAAT	57.722	33.333	30.15	17.58	42.23	1.40
76	77	8.264347	TGATCATGTAGGCTACACTTGATTTAA	58.736	33.333	30.15	21.14	42.23	1.52
77	78	7.791029	TGATCATGTAGGCTACACTTGATTTA	58.209	34.615	30.15	23.05	42.23	1.40
78	79	6.653020	TGATCATGTAGGCTACACTTGATTT	58.347	36.000	30.15	18.63	42.23	2.17
79	80	6.239217	TGATCATGTAGGCTACACTTGATT	57.761	37.500	30.15	20.14	42.23	2.57
80	81	5.876651	TGATCATGTAGGCTACACTTGAT	57.123	39.130	30.08	30.08	42.23	2.57
81	82	5.675684	TTGATCATGTAGGCTACACTTGA	57.324	39.130	28.40	26.54	42.23	3.02
82	83	6.932356	AATTGATCATGTAGGCTACACTTG	57.068	37.500	28.40	22.62	42.23	3.16
83	84	7.394359	ACAAAATTGATCATGTAGGCTACACTT	59.606	33.333	28.40	16.13	42.23	3.16
84	85	6.886459	ACAAAATTGATCATGTAGGCTACACT	59.114	34.615	28.40	16.32	42.23	3.55
85	86	7.088589	ACAAAATTGATCATGTAGGCTACAC	57.911	36.000	28.40	16.41	42.23	2.90
86	87	7.826744	TGTACAAAATTGATCATGTAGGCTACA	59.173	33.333	28.04	28.04	43.80	2.74
87	88	8.208718	TGTACAAAATTGATCATGTAGGCTAC	57.791	34.615	17.76	17.76	0.00	3.58
88	89	8.839343	CATGTACAAAATTGATCATGTAGGCTA	58.161	33.333	0.00	0.00	37.65	3.93
89	90	7.682741	GCATGTACAAAATTGATCATGTAGGCT	60.683	37.037	22.16	0.00	40.67	4.58
90	91	6.418819	GCATGTACAAAATTGATCATGTAGGC	59.581	38.462	22.16	7.88	40.67	3.93
91	92	6.634035	CGCATGTACAAAATTGATCATGTAGG	59.366	38.462	22.16	14.71	40.67	3.18
92	93	6.141211	GCGCATGTACAAAATTGATCATGTAG	59.859	38.462	22.16	19.15	40.67	2.74
93	94	5.970612	GCGCATGTACAAAATTGATCATGTA	59.029	36.000	22.16	0.00	40.67	2.29
94	95	4.799949	GCGCATGTACAAAATTGATCATGT	59.200	37.500	22.16	0.00	40.67	3.21
95	96	5.038683	AGCGCATGTACAAAATTGATCATG	58.961	37.500	11.47	19.73	41.03	3.07
96	97	5.038683	CAGCGCATGTACAAAATTGATCAT	58.961	37.500	11.47	1.89	0.00	2.45
97	98	4.082841	ACAGCGCATGTACAAAATTGATCA	60.083	37.500	11.47	0.00	41.60	2.92
98	99	4.414852	ACAGCGCATGTACAAAATTGATC	58.585	39.130	11.47	0.00	41.60	2.92
99	100	4.439305	ACAGCGCATGTACAAAATTGAT	57.561	36.364	11.47	0.00	41.60	2.57
100	101	3.913548	ACAGCGCATGTACAAAATTGA	57.086	38.095	11.47	0.00	41.60	2.57
109	110	3.135225	ACACAAAAGTACAGCGCATGTA	58.865	40.909	11.47	12.73	43.66	2.29
110	111	1.946768	ACACAAAAGTACAGCGCATGT	59.053	42.857	11.47	13.82	46.45	3.21
111	112	2.686558	ACACAAAAGTACAGCGCATG	57.313	45.000	11.47	7.81	0.00	4.06
112	113	2.357637	ACAACACAAAAGTACAGCGCAT	59.642	40.909	11.47	0.00	0.00	4.73
113	114	1.740585	ACAACACAAAAGTACAGCGCA	59.259	42.857	11.47	0.00	0.00	6.09
114	115	2.468532	ACAACACAAAAGTACAGCGC	57.531	45.000	0.00	0.00	0.00	5.92
115	116	5.591643	AGATACAACACAAAAGTACAGCG	57.408	39.130	0.00	0.00	0.00	5.18
116	117	7.639945	AGAAAGATACAACACAAAAGTACAGC	58.360	34.615	0.00	0.00	0.00	4.40
121	122	9.921637	TGAAAAAGAAAGATACAACACAAAAGT	57.078	25.926	0.00	0.00	0.00	2.66
126	127	9.787532	CTTCTTGAAAAAGAAAGATACAACACA	57.212	29.630	2.82	0.00	38.23	3.72
127	128	8.746751	GCTTCTTGAAAAAGAAAGATACAACAC	58.253	33.333	2.82	0.00	38.23	3.32
128	129	8.465999	TGCTTCTTGAAAAAGAAAGATACAACA	58.534	29.630	2.82	0.00	38.23	3.33
129	130	8.856490	TGCTTCTTGAAAAAGAAAGATACAAC	57.144	30.769	2.82	0.00	38.23	3.32
130	131	7.649306	GCTGCTTCTTGAAAAAGAAAGATACAA	59.351	33.333	2.82	0.00	38.23	2.41
131	132	7.141363	GCTGCTTCTTGAAAAAGAAAGATACA	58.859	34.615	2.82	0.00	38.23	2.29
132	133	7.141363	TGCTGCTTCTTGAAAAAGAAAGATAC	58.859	34.615	0.00	0.00	38.23	2.24
133	134	7.275888	TGCTGCTTCTTGAAAAAGAAAGATA	57.724	32.000	0.00	0.00	38.23	1.98
134	135	6.152932	TGCTGCTTCTTGAAAAAGAAAGAT	57.847	33.333	0.00	0.00	38.23	2.40
135	136	5.581126	TGCTGCTTCTTGAAAAAGAAAGA	57.419	34.783	0.00	0.00	38.23	2.52
136	137	5.577945	TGTTGCTGCTTCTTGAAAAAGAAAG	59.422	36.000	0.00	0.36	38.23	2.62
137	138	5.477510	TGTTGCTGCTTCTTGAAAAAGAAA	58.522	33.333	0.00	0.00	38.23	2.52
138	139	5.070770	TGTTGCTGCTTCTTGAAAAAGAA	57.929	34.783	0.00	1.32	37.27	2.52
139	140	4.717233	TGTTGCTGCTTCTTGAAAAAGA	57.283	36.364	0.00	0.00	0.00	2.52
140	141	4.318546	GCATGTTGCTGCTTCTTGAAAAAG	60.319	41.667	0.00	0.00	40.96	2.27
141	142	3.556775	GCATGTTGCTGCTTCTTGAAAAA	59.443	39.130	0.00	0.00	40.96	1.94
142	143	3.125316	GCATGTTGCTGCTTCTTGAAAA	58.875	40.909	0.00	0.00	40.96	2.29
143	144	2.746269	GCATGTTGCTGCTTCTTGAAA	58.254	42.857	0.00	0.00	40.96	2.69
144	145	2.427232	GCATGTTGCTGCTTCTTGAA	57.573	45.000	0.00	0.00	40.96	2.69
155	156	4.691860	AATACTGACAGAAGCATGTTGC	57.308	40.909	10.08	0.00	45.46	4.17
158	159	9.672673	AGTAAAATAATACTGACAGAAGCATGT	57.327	29.630	10.08	0.00	34.86	3.21
175	176	9.860650	ACATGCCAATGGATAGTAGTAAAATAA	57.139	29.630	2.05	0.00	38.19	1.40
176	177	9.283768	CACATGCCAATGGATAGTAGTAAAATA	57.716	33.333	2.05	0.00	38.19	1.40
177	178	7.255590	GCACATGCCAATGGATAGTAGTAAAAT	60.256	37.037	2.05	0.00	38.19	1.82
178	179	6.039270	GCACATGCCAATGGATAGTAGTAAAA	59.961	38.462	2.05	0.00	38.19	1.52
179	180	5.530915	GCACATGCCAATGGATAGTAGTAAA	59.469	40.000	2.05	0.00	38.19	2.01
180	181	5.063204	GCACATGCCAATGGATAGTAGTAA	58.937	41.667	2.05	0.00	38.19	2.24
181	182	4.347876	AGCACATGCCAATGGATAGTAGTA	59.652	41.667	2.05	0.00	43.38	1.82
182	183	3.137176	AGCACATGCCAATGGATAGTAGT	59.863	43.478	2.05	0.00	43.38	2.73
183	184	3.748083	AGCACATGCCAATGGATAGTAG	58.252	45.455	2.05	0.00	43.38	2.57
184	185	3.862877	AGCACATGCCAATGGATAGTA	57.137	42.857	2.05	0.00	43.38	1.82
185	186	2.742428	AGCACATGCCAATGGATAGT	57.258	45.000	2.05	0.00	43.38	2.12
186	187	2.816087	GGTAGCACATGCCAATGGATAG	59.184	50.000	2.05	0.00	43.38	2.08
187	188	2.488891	GGGTAGCACATGCCAATGGATA	60.489	50.000	2.05	0.00	43.38	2.59
188	189	1.696063	GGTAGCACATGCCAATGGAT	58.304	50.000	2.05	0.00	43.38	3.41
189	190	0.395586	GGGTAGCACATGCCAATGGA	60.396	55.000	2.05	0.00	43.38	3.41
190	191	0.683828	TGGGTAGCACATGCCAATGG	60.684	55.000	0.00	0.00	43.38	3.16
191	192	0.742505	CTGGGTAGCACATGCCAATG	59.257	55.000	0.00	0.00	43.38	2.82
192	193	0.625316	TCTGGGTAGCACATGCCAAT	59.375	50.000	0.00	0.00	43.38	3.16
193	194	0.625316	ATCTGGGTAGCACATGCCAA	59.375	50.000	0.00	0.00	43.38	4.52
194	195	0.181114	GATCTGGGTAGCACATGCCA	59.819	55.000	0.00	0.00	43.38	4.92
195	196	0.181114	TGATCTGGGTAGCACATGCC	59.819	55.000	0.00	0.00	43.38	4.40
196	197	2.042686	TTGATCTGGGTAGCACATGC	57.957	50.000	0.00	0.00	42.49	4.06
217	218	9.860898	GCACATATATCCTTTTCACTTTTCTTT	57.139	29.630	0.00	0.00	0.00	2.52
218	219	9.023962	TGCACATATATCCTTTTCACTTTTCTT	57.976	29.630	0.00	0.00	0.00	2.52
219	220	8.579850	TGCACATATATCCTTTTCACTTTTCT	57.420	30.769	0.00	0.00	0.00	2.52
220	221	9.455847	GATGCACATATATCCTTTTCACTTTTC	57.544	33.333	0.00	0.00	0.00	2.29
221	222	8.970020	TGATGCACATATATCCTTTTCACTTTT	58.030	29.630	0.00	0.00	0.00	2.27
222	223	8.523915	TGATGCACATATATCCTTTTCACTTT	57.476	30.769	0.00	0.00	0.00	2.66
223	224	8.573885	CATGATGCACATATATCCTTTTCACTT	58.426	33.333	0.00	0.00	37.46	3.16
224	225	7.722728	ACATGATGCACATATATCCTTTTCACT	59.277	33.333	0.00	0.00	37.46	3.41
225	226	7.879070	ACATGATGCACATATATCCTTTTCAC	58.121	34.615	0.00	0.00	37.46	3.18
226	227	9.002600	GTACATGATGCACATATATCCTTTTCA	57.997	33.333	0.00	0.00	37.46	2.69
227	228	8.454106	GGTACATGATGCACATATATCCTTTTC	58.546	37.037	0.00	0.00	37.46	2.29
228	229	7.944000	TGGTACATGATGCACATATATCCTTTT	59.056	33.333	0.00	0.00	37.46	2.27
229	230	7.460910	TGGTACATGATGCACATATATCCTTT	58.539	34.615	0.00	0.00	37.46	3.11
230	231	7.019656	TGGTACATGATGCACATATATCCTT	57.980	36.000	0.00	0.00	37.46	3.36
231	232	6.625532	TGGTACATGATGCACATATATCCT	57.374	37.500	0.00	0.00	37.46	3.24
232	233	7.627088	GCTTTGGTACATGATGCACATATATCC	60.627	40.741	0.00	0.00	39.30	2.59
233	234	7.120285	AGCTTTGGTACATGATGCACATATATC	59.880	37.037	0.00	0.00	39.30	1.63
234	235	6.944290	AGCTTTGGTACATGATGCACATATAT	59.056	34.615	0.00	0.00	39.30	0.86
235	236	6.298361	AGCTTTGGTACATGATGCACATATA	58.702	36.000	0.00	0.00	39.30	0.86
236	237	5.135383	AGCTTTGGTACATGATGCACATAT	58.865	37.500	0.00	0.00	39.30	1.78
237	238	4.525996	AGCTTTGGTACATGATGCACATA	58.474	39.130	0.00	0.00	39.30	2.29
238	239	3.359033	AGCTTTGGTACATGATGCACAT	58.641	40.909	0.00	0.00	39.30	3.21
239	240	2.794103	AGCTTTGGTACATGATGCACA	58.206	42.857	0.00	0.00	39.30	4.57
240	241	4.635765	TCTTAGCTTTGGTACATGATGCAC	59.364	41.667	0.00	0.00	39.30	4.57
241	242	4.842574	TCTTAGCTTTGGTACATGATGCA	58.157	39.130	0.00	0.00	39.30	3.96
242	243	5.818136	TTCTTAGCTTTGGTACATGATGC	57.182	39.130	0.00	0.00	39.30	3.91
268	269	9.719355	TGTTGCTCAACTAATTGAAAGTAGATA	57.281	29.630	13.16	0.00	44.28	1.98
269	270	8.621532	TGTTGCTCAACTAATTGAAAGTAGAT	57.378	30.769	13.16	0.00	44.28	1.98
270	271	7.715249	ACTGTTGCTCAACTAATTGAAAGTAGA	59.285	33.333	13.16	0.00	44.28	2.59
271	272	7.865707	ACTGTTGCTCAACTAATTGAAAGTAG	58.134	34.615	13.16	0.00	44.28	2.57
272	273	7.801716	ACTGTTGCTCAACTAATTGAAAGTA	57.198	32.000	13.16	0.00	44.28	2.24
273	274	6.699575	ACTGTTGCTCAACTAATTGAAAGT	57.300	33.333	13.16	3.94	44.28	2.66
274	275	7.385668	CAACTGTTGCTCAACTAATTGAAAG	57.614	36.000	7.70	3.40	44.28	2.62
293	294	1.135315	GCGCATGTACTGGCAACTG	59.865	57.895	0.30	0.00	42.06	3.16
294	295	0.249120	TAGCGCATGTACTGGCAACT	59.751	50.000	11.47	8.06	37.61	3.16
295	296	0.373716	GTAGCGCATGTACTGGCAAC	59.626	55.000	11.47	0.00	0.00	4.17
296	297	0.742990	GGTAGCGCATGTACTGGCAA	60.743	55.000	11.47	0.00	0.00	4.52
297	298	1.153449	GGTAGCGCATGTACTGGCA	60.153	57.895	11.47	0.00	0.00	4.92
298	299	0.387929	TAGGTAGCGCATGTACTGGC	59.612	55.000	11.47	0.00	0.00	4.85
299	300	1.954382	TCTAGGTAGCGCATGTACTGG	59.046	52.381	11.47	2.28	0.00	4.00
300	301	2.287668	GGTCTAGGTAGCGCATGTACTG	60.288	54.545	11.47	0.00	0.00	2.74
301	302	1.955080	GGTCTAGGTAGCGCATGTACT	59.045	52.381	11.47	2.50	0.00	2.73
302	303	1.679680	TGGTCTAGGTAGCGCATGTAC	59.320	52.381	11.47	3.00	0.00	2.90
303	304	1.679680	GTGGTCTAGGTAGCGCATGTA	59.320	52.381	11.47	0.00	0.00	2.29
304	305	0.460311	GTGGTCTAGGTAGCGCATGT	59.540	55.000	11.47	0.00	0.00	3.21
305	306	0.459899	TGTGGTCTAGGTAGCGCATG	59.540	55.000	11.47	0.00	32.81	4.06
306	307	1.191535	TTGTGGTCTAGGTAGCGCAT	58.808	50.000	11.47	0.00	37.24	4.73
307	308	0.970640	TTTGTGGTCTAGGTAGCGCA	59.029	50.000	11.47	0.00	35.72	6.09
308	309	2.000447	CTTTTGTGGTCTAGGTAGCGC	59.000	52.381	0.00	0.00	0.00	5.92
309	310	2.618053	CCTTTTGTGGTCTAGGTAGCG	58.382	52.381	0.00	0.00	0.00	4.26
310	311	2.290071	TGCCTTTTGTGGTCTAGGTAGC	60.290	50.000	0.00	0.00	0.00	3.58
311	312	3.695830	TGCCTTTTGTGGTCTAGGTAG	57.304	47.619	0.00	0.00	0.00	3.18
312	313	3.393278	ACTTGCCTTTTGTGGTCTAGGTA	59.607	43.478	0.00	0.00	0.00	3.08
313	314	2.174854	ACTTGCCTTTTGTGGTCTAGGT	59.825	45.455	0.00	0.00	0.00	3.08
314	315	2.554032	CACTTGCCTTTTGTGGTCTAGG	59.446	50.000	0.00	0.00	0.00	3.02
315	316	3.476552	TCACTTGCCTTTTGTGGTCTAG	58.523	45.455	0.00	0.00	33.04	2.43
316	317	3.569194	TCACTTGCCTTTTGTGGTCTA	57.431	42.857	0.00	0.00	33.04	2.59
317	318	2.435372	TCACTTGCCTTTTGTGGTCT	57.565	45.000	0.00	0.00	33.04	3.85
318	319	3.518634	TTTCACTTGCCTTTTGTGGTC	57.481	42.857	0.00	0.00	33.04	4.02
319	320	3.369366	CCTTTTCACTTGCCTTTTGTGGT	60.369	43.478	0.00	0.00	33.04	4.16
320	321	3.197265	CCTTTTCACTTGCCTTTTGTGG	58.803	45.455	0.00	0.00	33.04	4.17
321	322	3.618150	CACCTTTTCACTTGCCTTTTGTG	59.382	43.478	0.00	0.00	0.00	3.33
322	323	3.860641	CACCTTTTCACTTGCCTTTTGT	58.139	40.909	0.00	0.00	0.00	2.83
323	324	2.609002	GCACCTTTTCACTTGCCTTTTG	59.391	45.455	0.00	0.00	0.00	2.44
324	325	2.738321	CGCACCTTTTCACTTGCCTTTT	60.738	45.455	0.00	0.00	0.00	2.27
325	326	1.202405	CGCACCTTTTCACTTGCCTTT	60.202	47.619	0.00	0.00	0.00	3.11
326	327	0.385390	CGCACCTTTTCACTTGCCTT	59.615	50.000	0.00	0.00	0.00	4.35
327	328	2.032981	CGCACCTTTTCACTTGCCT	58.967	52.632	0.00	0.00	0.00	4.75
328	329	1.661509	GCGCACCTTTTCACTTGCC	60.662	57.895	0.30	0.00	0.00	4.52
329	330	0.661483	GAGCGCACCTTTTCACTTGC	60.661	55.000	11.47	0.00	0.00	4.01
330	331	0.040067	GGAGCGCACCTTTTCACTTG	60.040	55.000	17.33	0.00	0.00	3.16
331	332	1.172812	GGGAGCGCACCTTTTCACTT	61.173	55.000	23.40	0.00	0.00	3.16
332	333	1.600916	GGGAGCGCACCTTTTCACT	60.601	57.895	23.40	0.00	0.00	3.41
333	334	2.626780	GGGGAGCGCACCTTTTCAC	61.627	63.158	23.40	4.67	33.55	3.18
334	335	2.282180	GGGGAGCGCACCTTTTCA	60.282	61.111	23.40	0.00	33.55	2.69
340	341	4.162690	CTGGTAGGGGAGCGCACC	62.163	72.222	16.31	16.31	38.12	5.01
341	342	4.162690	CCTGGTAGGGGAGCGCAC	62.163	72.222	11.47	1.97	0.00	5.34
344	345	4.162690	GTGCCTGGTAGGGGAGCG	62.163	72.222	0.00	0.00	35.37	5.03
345	346	3.798511	GGTGCCTGGTAGGGGAGC	61.799	72.222	0.00	0.00	37.96	4.70
346	347	3.470888	CGGTGCCTGGTAGGGGAG	61.471	72.222	0.00	0.00	35.37	4.30
357	358	4.699522	AGGAAGTTCGGCGGTGCC	62.700	66.667	7.21	0.00	46.75	5.01
358	359	3.119096	GAGGAAGTTCGGCGGTGC	61.119	66.667	7.21	0.00	0.00	5.01
359	360	2.434359	GGAGGAAGTTCGGCGGTG	60.434	66.667	7.21	0.00	0.00	4.94
360	361	3.703127	GGGAGGAAGTTCGGCGGT	61.703	66.667	7.21	0.00	0.00	5.68
361	362	4.468689	GGGGAGGAAGTTCGGCGG	62.469	72.222	7.21	0.00	0.00	6.13
362	363	3.665675	CTGGGGAGGAAGTTCGGCG	62.666	68.421	0.00	0.00	0.00	6.46
363	364	2.269241	CTGGGGAGGAAGTTCGGC	59.731	66.667	0.00	0.00	0.00	5.54
364	365	1.296715	CACTGGGGAGGAAGTTCGG	59.703	63.158	0.00	0.00	0.00	4.30
365	366	1.296715	CCACTGGGGAGGAAGTTCG	59.703	63.158	0.00	0.00	40.01	3.95
366	367	1.002011	GCCACTGGGGAGGAAGTTC	60.002	63.158	0.00	0.00	40.01	3.01
367	368	2.895424	CGCCACTGGGGAGGAAGTT	61.895	63.158	6.25	0.00	40.01	2.66
368	369	3.322466	CGCCACTGGGGAGGAAGT	61.322	66.667	6.25	0.00	40.01	3.01
369	370	4.785453	GCGCCACTGGGGAGGAAG	62.785	72.222	16.22	0.00	40.01	3.46
396	397	2.267961	CACTAGGGGTTGGGACGC	59.732	66.667	0.00	0.00	37.95	5.19
397	398	1.916777	ACCACTAGGGGTTGGGACG	60.917	63.158	12.16	0.00	42.91	4.79
398	399	4.245333	ACCACTAGGGGTTGGGAC	57.755	61.111	12.16	0.00	42.91	4.46
404	405	3.397955	ACATTTTCTGAACCACTAGGGGT	59.602	43.478	12.16	12.16	45.04	4.95
405	406	4.010349	GACATTTTCTGAACCACTAGGGG	58.990	47.826	10.33	10.33	42.91	4.79
406	407	4.455877	GTGACATTTTCTGAACCACTAGGG	59.544	45.833	0.00	0.00	44.81	3.53
407	408	4.152402	CGTGACATTTTCTGAACCACTAGG	59.848	45.833	0.00	0.00	42.21	3.02
408	409	4.750098	ACGTGACATTTTCTGAACCACTAG	59.250	41.667	0.00	0.00	0.00	2.57
409	410	4.699637	ACGTGACATTTTCTGAACCACTA	58.300	39.130	0.00	0.00	0.00	2.74
410	411	3.541632	ACGTGACATTTTCTGAACCACT	58.458	40.909	0.00	0.00	0.00	4.00
411	412	3.560068	AGACGTGACATTTTCTGAACCAC	59.440	43.478	0.00	0.00	0.00	4.16
412	413	3.804036	AGACGTGACATTTTCTGAACCA	58.196	40.909	0.00	0.00	0.00	3.67
413	414	5.163854	CCATAGACGTGACATTTTCTGAACC	60.164	44.000	0.00	0.00	0.00	3.62
414	415	5.637810	TCCATAGACGTGACATTTTCTGAAC	59.362	40.000	0.00	0.00	0.00	3.18
415	416	5.637810	GTCCATAGACGTGACATTTTCTGAA	59.362	40.000	0.00	0.00	32.18	3.02
416	417	5.168569	GTCCATAGACGTGACATTTTCTGA	58.831	41.667	0.00	0.00	32.18	3.27
417	418	5.456192	GTCCATAGACGTGACATTTTCTG	57.544	43.478	0.00	0.00	32.18	3.02
430	431	2.460918	CAACCGTGATCGTCCATAGAC	58.539	52.381	0.00	0.00	39.83	2.59
431	432	1.202371	GCAACCGTGATCGTCCATAGA	60.202	52.381	0.00	0.00	35.01	1.98
432	433	1.202417	AGCAACCGTGATCGTCCATAG	60.202	52.381	0.00	0.00	35.01	2.23
433	434	0.821517	AGCAACCGTGATCGTCCATA	59.178	50.000	0.00	0.00	35.01	2.74
434	435	0.460284	GAGCAACCGTGATCGTCCAT	60.460	55.000	0.00	0.00	28.93	3.41
435	436	1.080093	GAGCAACCGTGATCGTCCA	60.080	57.895	0.00	0.00	28.93	4.02
436	437	1.078759	CAGAGCAACCGTGATCGTCC	61.079	60.000	0.00	0.00	45.12	4.79
437	438	1.687494	GCAGAGCAACCGTGATCGTC	61.687	60.000	0.00	0.00	45.12	4.20
438	439	1.738099	GCAGAGCAACCGTGATCGT	60.738	57.895	0.00	0.00	45.12	3.73
439	440	1.690283	CTGCAGAGCAACCGTGATCG	61.690	60.000	8.42	0.00	45.12	3.69
440	441	0.390340	TCTGCAGAGCAACCGTGATC	60.390	55.000	13.74	0.00	40.63	2.92
441	442	0.251354	ATCTGCAGAGCAACCGTGAT	59.749	50.000	22.96	0.00	38.41	3.06
442	443	0.390340	GATCTGCAGAGCAACCGTGA	60.390	55.000	26.46	0.00	38.41	4.35
443	444	1.690283	CGATCTGCAGAGCAACCGTG	61.690	60.000	29.71	10.12	38.41	4.94
444	445	1.446792	CGATCTGCAGAGCAACCGT	60.447	57.895	29.71	8.16	38.41	4.83
445	446	2.169789	CCGATCTGCAGAGCAACCG	61.170	63.158	29.71	20.83	38.41	4.44
446	447	1.817099	CCCGATCTGCAGAGCAACC	60.817	63.158	29.71	11.71	38.41	3.77
447	448	0.179062	ATCCCGATCTGCAGAGCAAC	60.179	55.000	29.71	15.70	38.41	4.17
448	449	1.413118	TATCCCGATCTGCAGAGCAA	58.587	50.000	29.71	15.77	38.41	3.91
449	450	1.413118	TTATCCCGATCTGCAGAGCA	58.587	50.000	29.71	12.67	36.92	4.26
450	451	2.289320	ACATTATCCCGATCTGCAGAGC	60.289	50.000	22.01	22.01	0.00	4.09
451	452	3.006217	TCACATTATCCCGATCTGCAGAG	59.994	47.826	22.96	9.32	0.00	3.35
452	453	2.965147	TCACATTATCCCGATCTGCAGA	59.035	45.455	20.79	20.79	0.00	4.26
453	454	3.391506	TCACATTATCCCGATCTGCAG	57.608	47.619	7.63	7.63	0.00	4.41
454	455	4.067192	CAATCACATTATCCCGATCTGCA	58.933	43.478	0.00	0.00	0.00	4.41
455	456	4.067896	ACAATCACATTATCCCGATCTGC	58.932	43.478	0.00	0.00	0.00	4.26
456	457	5.299949	TCACAATCACATTATCCCGATCTG	58.700	41.667	0.00	0.00	0.00	2.90
457	458	5.551305	TCACAATCACATTATCCCGATCT	57.449	39.130	0.00	0.00	0.00	2.75
458	459	6.427853	TGATTCACAATCACATTATCCCGATC	59.572	38.462	0.00	0.00	42.69	3.69
459	460	6.298361	TGATTCACAATCACATTATCCCGAT	58.702	36.000	0.00	0.00	42.69	4.18
460	461	5.679601	TGATTCACAATCACATTATCCCGA	58.320	37.500	0.00	0.00	42.69	5.14
461	462	5.528690	ACTGATTCACAATCACATTATCCCG	59.471	40.000	0.00	0.00	42.69	5.14
462	463	6.238842	CCACTGATTCACAATCACATTATCCC	60.239	42.308	0.00	0.00	42.69	3.85
463	464	6.319658	ACCACTGATTCACAATCACATTATCC	59.680	38.462	0.00	0.00	42.69	2.59
464	465	7.191551	CACCACTGATTCACAATCACATTATC	58.808	38.462	0.00	0.00	42.69	1.75
465	466	6.095860	CCACCACTGATTCACAATCACATTAT	59.904	38.462	0.00	0.00	42.69	1.28
466	467	5.415389	CCACCACTGATTCACAATCACATTA	59.585	40.000	0.00	0.00	42.69	1.90
467	468	4.219070	CCACCACTGATTCACAATCACATT	59.781	41.667	0.00	0.00	42.69	2.71
468	469	3.760151	CCACCACTGATTCACAATCACAT	59.240	43.478	0.00	0.00	42.69	3.21
469	470	3.148412	CCACCACTGATTCACAATCACA	58.852	45.455	0.00	0.00	42.69	3.58
470	471	3.411446	TCCACCACTGATTCACAATCAC	58.589	45.455	0.00	0.00	42.69	3.06
471	472	3.678289	CTCCACCACTGATTCACAATCA	58.322	45.455	0.00	0.00	45.19	2.57
472	473	2.421424	GCTCCACCACTGATTCACAATC	59.579	50.000	0.00	0.00	38.40	2.67
473	474	2.040813	AGCTCCACCACTGATTCACAAT	59.959	45.455	0.00	0.00	0.00	2.71
474	475	1.421268	AGCTCCACCACTGATTCACAA	59.579	47.619	0.00	0.00	0.00	3.33
475	476	1.059098	AGCTCCACCACTGATTCACA	58.941	50.000	0.00	0.00	0.00	3.58
476	477	2.419297	CCTAGCTCCACCACTGATTCAC	60.419	54.545	0.00	0.00	0.00	3.18
477	478	1.833630	CCTAGCTCCACCACTGATTCA	59.166	52.381	0.00	0.00	0.00	2.57
478	479	1.474143	GCCTAGCTCCACCACTGATTC	60.474	57.143	0.00	0.00	0.00	2.52
479	480	0.543749	GCCTAGCTCCACCACTGATT	59.456	55.000	0.00	0.00	0.00	2.57
480	481	1.341156	GGCCTAGCTCCACCACTGAT	61.341	60.000	0.00	0.00	0.00	2.90
481	482	1.990060	GGCCTAGCTCCACCACTGA	60.990	63.158	0.00	0.00	0.00	3.41
482	483	2.586792	GGCCTAGCTCCACCACTG	59.413	66.667	0.00	0.00	0.00	3.66
483	484	3.077556	CGGCCTAGCTCCACCACT	61.078	66.667	0.00	0.00	0.00	4.00
484	485	4.162690	CCGGCCTAGCTCCACCAC	62.163	72.222	0.00	0.00	0.00	4.16
487	488	3.816367	GATGCCGGCCTAGCTCCAC	62.816	68.421	26.77	0.00	0.00	4.02
488	489	3.550431	GATGCCGGCCTAGCTCCA	61.550	66.667	26.77	1.65	0.00	3.86
489	490	3.527775	CTGATGCCGGCCTAGCTCC	62.528	68.421	26.77	1.69	0.00	4.70
490	491	2.030262	CTGATGCCGGCCTAGCTC	59.970	66.667	26.77	13.11	0.00	4.09
491	492	3.554342	CCTGATGCCGGCCTAGCT	61.554	66.667	26.77	2.69	0.00	3.32
509	510	4.338710	TTGAAAGACGGGCCGGGG	62.339	66.667	31.78	2.48	0.00	5.73
510	511	2.741486	TTCTTGAAAGACGGGCCGGG	62.741	60.000	31.78	3.37	34.13	5.73
511	512	0.676782	ATTCTTGAAAGACGGGCCGG	60.677	55.000	31.78	12.53	34.13	6.13
512	513	0.727398	GATTCTTGAAAGACGGGCCG	59.273	55.000	27.06	27.06	34.13	6.13
513	514	1.740025	CTGATTCTTGAAAGACGGGCC	59.260	52.381	0.00	0.00	34.13	5.80
514	515	1.740025	CCTGATTCTTGAAAGACGGGC	59.260	52.381	0.00	0.00	34.13	6.13
515	516	3.059352	ACCTGATTCTTGAAAGACGGG	57.941	47.619	6.89	6.89	35.03	5.28
516	517	4.392138	GGTTACCTGATTCTTGAAAGACGG	59.608	45.833	0.00	0.00	34.13	4.79
517	518	4.994852	TGGTTACCTGATTCTTGAAAGACG	59.005	41.667	2.07	0.00	34.13	4.18
518	519	6.877611	TTGGTTACCTGATTCTTGAAAGAC	57.122	37.500	2.07	0.00	34.13	3.01
519	520	7.777910	TCTTTTGGTTACCTGATTCTTGAAAGA	59.222	33.333	2.07	2.67	0.00	2.52
520	521	7.940850	TCTTTTGGTTACCTGATTCTTGAAAG	58.059	34.615	2.07	0.60	0.00	2.62
521	522	7.889873	TCTTTTGGTTACCTGATTCTTGAAA	57.110	32.000	2.07	0.00	0.00	2.69
522	523	7.505585	ACATCTTTTGGTTACCTGATTCTTGAA	59.494	33.333	2.07	0.00	0.00	2.69
523	524	7.004086	ACATCTTTTGGTTACCTGATTCTTGA	58.996	34.615	2.07	0.00	0.00	3.02
524	525	7.040478	TGACATCTTTTGGTTACCTGATTCTTG	60.040	37.037	2.07	0.00	0.00	3.02
525	526	7.004086	TGACATCTTTTGGTTACCTGATTCTT	58.996	34.615	2.07	0.00	0.00	2.52
526	527	6.431234	GTGACATCTTTTGGTTACCTGATTCT	59.569	38.462	2.07	0.00	0.00	2.40
527	528	6.431234	AGTGACATCTTTTGGTTACCTGATTC	59.569	38.462	2.07	3.81	0.00	2.52
528	529	6.306987	AGTGACATCTTTTGGTTACCTGATT	58.693	36.000	2.07	0.00	0.00	2.57
529	530	5.880901	AGTGACATCTTTTGGTTACCTGAT	58.119	37.500	2.07	0.00	0.00	2.90
530	531	5.304686	AGTGACATCTTTTGGTTACCTGA	57.695	39.130	2.07	0.00	0.00	3.86
531	532	5.334105	CGAAGTGACATCTTTTGGTTACCTG	60.334	44.000	2.07	0.00	0.00	4.00
532	533	4.755123	CGAAGTGACATCTTTTGGTTACCT	59.245	41.667	2.07	0.00	0.00	3.08
533	534	4.083484	CCGAAGTGACATCTTTTGGTTACC	60.083	45.833	0.00	0.00	0.00	2.85
534	535	4.083484	CCCGAAGTGACATCTTTTGGTTAC	60.083	45.833	0.00	0.00	0.00	2.50
535	536	4.069304	CCCGAAGTGACATCTTTTGGTTA	58.931	43.478	0.00	0.00	0.00	2.85
536	537	2.884639	CCCGAAGTGACATCTTTTGGTT	59.115	45.455	0.00	0.00	0.00	3.67
537	538	2.504367	CCCGAAGTGACATCTTTTGGT	58.496	47.619	0.00	0.00	0.00	3.67
538	539	1.200020	GCCCGAAGTGACATCTTTTGG	59.800	52.381	0.00	0.00	0.00	3.28
539	540	2.154462	AGCCCGAAGTGACATCTTTTG	58.846	47.619	0.00	0.00	0.00	2.44
540	541	2.568623	AGCCCGAAGTGACATCTTTT	57.431	45.000	0.00	0.00	0.00	2.27
541	542	2.301870	TGTAGCCCGAAGTGACATCTTT	59.698	45.455	0.00	0.00	0.00	2.52
542	543	1.899814	TGTAGCCCGAAGTGACATCTT	59.100	47.619	0.00	0.00	0.00	2.40
543	544	1.478510	CTGTAGCCCGAAGTGACATCT	59.521	52.381	0.00	0.00	0.00	2.90
544	545	1.927895	CTGTAGCCCGAAGTGACATC	58.072	55.000	0.00	0.00	0.00	3.06
545	546	0.108138	GCTGTAGCCCGAAGTGACAT	60.108	55.000	0.00	0.00	34.31	3.06
546	547	1.292223	GCTGTAGCCCGAAGTGACA	59.708	57.895	0.00	0.00	34.31	3.58
547	548	4.187056	GCTGTAGCCCGAAGTGAC	57.813	61.111	0.00	0.00	34.31	3.67
574	575	2.352805	GAGGACCTGGCCAAGTGG	59.647	66.667	12.93	10.17	38.53	4.00
575	576	2.227036	AGGAGGACCTGGCCAAGTG	61.227	63.158	12.93	3.08	45.92	3.16
576	577	2.208349	AGGAGGACCTGGCCAAGT	59.792	61.111	6.73	6.73	45.92	3.16
585	586	1.609072	GCAAAGACAAACAGGAGGACC	59.391	52.381	0.00	0.00	0.00	4.46
586	587	2.297701	TGCAAAGACAAACAGGAGGAC	58.702	47.619	0.00	0.00	0.00	3.85
587	588	2.727123	TGCAAAGACAAACAGGAGGA	57.273	45.000	0.00	0.00	0.00	3.71
588	589	2.608752	GCATGCAAAGACAAACAGGAGG	60.609	50.000	14.21	0.00	0.00	4.30
589	590	2.034939	TGCATGCAAAGACAAACAGGAG	59.965	45.455	20.30	0.00	0.00	3.69
590	591	2.030371	TGCATGCAAAGACAAACAGGA	58.970	42.857	20.30	0.00	0.00	3.86
591	592	2.512485	TGCATGCAAAGACAAACAGG	57.488	45.000	20.30	0.00	0.00	4.00
605	606	4.310357	TGCATTTACCTAAGCATGCATG	57.690	40.909	22.70	22.70	45.50	4.06
608	609	2.951642	TCCTGCATTTACCTAAGCATGC	59.048	45.455	10.51	10.51	42.07	4.06
609	610	3.947196	TGTCCTGCATTTACCTAAGCATG	59.053	43.478	0.00	0.00	36.28	4.06
610	611	4.235079	TGTCCTGCATTTACCTAAGCAT	57.765	40.909	0.00	0.00	36.28	3.79
611	612	3.712016	TGTCCTGCATTTACCTAAGCA	57.288	42.857	0.00	0.00	35.43	3.91
612	613	4.199310	TCATGTCCTGCATTTACCTAAGC	58.801	43.478	0.00	0.00	35.19	3.09
613	614	5.066505	GGTTCATGTCCTGCATTTACCTAAG	59.933	44.000	0.00	0.00	36.38	2.18
614	615	4.947388	GGTTCATGTCCTGCATTTACCTAA	59.053	41.667	0.00	0.00	36.38	2.69
615	616	4.018870	TGGTTCATGTCCTGCATTTACCTA	60.019	41.667	10.06	0.00	38.40	3.08
616	617	3.245229	TGGTTCATGTCCTGCATTTACCT	60.245	43.478	10.06	0.00	38.40	3.08
617	618	3.088532	TGGTTCATGTCCTGCATTTACC	58.911	45.455	10.06	0.00	38.22	2.85
618	619	4.989279	ATGGTTCATGTCCTGCATTTAC	57.011	40.909	10.06	0.00	35.19	2.01
619	620	4.381825	GCAATGGTTCATGTCCTGCATTTA	60.382	41.667	14.03	0.00	35.19	1.40
620	621	3.618019	GCAATGGTTCATGTCCTGCATTT	60.618	43.478	14.03	1.22	35.19	2.32
621	622	2.093869	GCAATGGTTCATGTCCTGCATT	60.094	45.455	14.03	0.00	35.19	3.56
622	623	1.479323	GCAATGGTTCATGTCCTGCAT	59.521	47.619	14.03	0.00	38.60	3.96
623	624	0.889994	GCAATGGTTCATGTCCTGCA	59.110	50.000	14.03	0.00	0.00	4.41
624	625	1.180029	AGCAATGGTTCATGTCCTGC	58.820	50.000	12.29	12.29	0.00	4.85
625	626	3.256383	TCAAAGCAATGGTTCATGTCCTG	59.744	43.478	0.00	0.00	0.00	3.86
626	627	3.499338	TCAAAGCAATGGTTCATGTCCT	58.501	40.909	0.00	0.00	0.00	3.85
627	628	3.940209	TCAAAGCAATGGTTCATGTCC	57.060	42.857	0.00	0.00	0.00	4.02
628	629	4.159135	AGGATCAAAGCAATGGTTCATGTC	59.841	41.667	0.00	0.00	0.00	3.06
629	630	4.091549	AGGATCAAAGCAATGGTTCATGT	58.908	39.130	0.00	0.00	0.00	3.21
630	631	4.730949	AGGATCAAAGCAATGGTTCATG	57.269	40.909	0.00	0.00	0.00	3.07
631	632	5.513233	AGTAGGATCAAAGCAATGGTTCAT	58.487	37.500	0.00	0.00	0.00	2.57
632	633	4.922206	AGTAGGATCAAAGCAATGGTTCA	58.078	39.130	0.00	0.00	0.00	3.18
633	634	5.189180	AGAGTAGGATCAAAGCAATGGTTC	58.811	41.667	0.00	0.00	0.00	3.62
634	635	5.184892	AGAGTAGGATCAAAGCAATGGTT	57.815	39.130	0.00	0.00	0.00	3.67
635	636	4.851639	AGAGTAGGATCAAAGCAATGGT	57.148	40.909	0.00	0.00	0.00	3.55
636	637	5.923204	AGTAGAGTAGGATCAAAGCAATGG	58.077	41.667	0.00	0.00	0.00	3.16
637	638	8.986847	CATTAGTAGAGTAGGATCAAAGCAATG	58.013	37.037	0.00	0.00	0.00	2.82
638	639	8.153550	CCATTAGTAGAGTAGGATCAAAGCAAT	58.846	37.037	0.00	0.00	0.00	3.56
639	640	7.125811	ACCATTAGTAGAGTAGGATCAAAGCAA	59.874	37.037	0.00	0.00	0.00	3.91
640	641	6.611642	ACCATTAGTAGAGTAGGATCAAAGCA	59.388	38.462	0.00	0.00	0.00	3.91
641	642	6.926272	CACCATTAGTAGAGTAGGATCAAAGC	59.074	42.308	0.00	0.00	0.00	3.51
642	643	7.287927	TCCACCATTAGTAGAGTAGGATCAAAG	59.712	40.741	0.00	0.00	0.00	2.77
643	644	7.130099	TCCACCATTAGTAGAGTAGGATCAAA	58.870	38.462	0.00	0.00	0.00	2.69
644	645	6.679542	TCCACCATTAGTAGAGTAGGATCAA	58.320	40.000	0.00	0.00	0.00	2.57
645	646	6.275692	TCCACCATTAGTAGAGTAGGATCA	57.724	41.667	0.00	0.00	0.00	2.92
646	647	6.153680	CCATCCACCATTAGTAGAGTAGGATC	59.846	46.154	0.00	0.00	31.37	3.36
647	648	6.019748	CCATCCACCATTAGTAGAGTAGGAT	58.980	44.000	0.00	0.00	33.87	3.24
648	649	5.135533	TCCATCCACCATTAGTAGAGTAGGA	59.864	44.000	0.00	0.00	0.00	2.94
649	650	5.394738	TCCATCCACCATTAGTAGAGTAGG	58.605	45.833	0.00	0.00	0.00	3.18
650	651	6.978674	TTCCATCCACCATTAGTAGAGTAG	57.021	41.667	0.00	0.00	0.00	2.57
651	652	7.931015	ATTTCCATCCACCATTAGTAGAGTA	57.069	36.000	0.00	0.00	0.00	2.59
652	653	6.831664	ATTTCCATCCACCATTAGTAGAGT	57.168	37.500	0.00	0.00	0.00	3.24
653	654	9.277783	CTTAATTTCCATCCACCATTAGTAGAG	57.722	37.037	0.00	0.00	0.00	2.43
654	655	7.719633	GCTTAATTTCCATCCACCATTAGTAGA	59.280	37.037	0.00	0.00	0.00	2.59
655	656	7.502226	TGCTTAATTTCCATCCACCATTAGTAG	59.498	37.037	0.00	0.00	0.00	2.57
656	657	7.350382	TGCTTAATTTCCATCCACCATTAGTA	58.650	34.615	0.00	0.00	0.00	1.82
657	658	6.194235	TGCTTAATTTCCATCCACCATTAGT	58.806	36.000	0.00	0.00	0.00	2.24
658	659	6.713762	TGCTTAATTTCCATCCACCATTAG	57.286	37.500	0.00	0.00	0.00	1.73
659	660	6.462768	GCATGCTTAATTTCCATCCACCATTA	60.463	38.462	11.37	0.00	0.00	1.90
660	661	5.685599	GCATGCTTAATTTCCATCCACCATT	60.686	40.000	11.37	0.00	0.00	3.16
661	662	4.202284	GCATGCTTAATTTCCATCCACCAT	60.202	41.667	11.37	0.00	0.00	3.55
662	663	3.132646	GCATGCTTAATTTCCATCCACCA	59.867	43.478	11.37	0.00	0.00	4.17
663	664	3.721035	GCATGCTTAATTTCCATCCACC	58.279	45.455	11.37	0.00	0.00	4.61
664	665	3.374745	CGCATGCTTAATTTCCATCCAC	58.625	45.455	17.13	0.00	0.00	4.02
665	666	2.223782	GCGCATGCTTAATTTCCATCCA	60.224	45.455	17.13	0.00	38.39	3.41
666	667	2.397549	GCGCATGCTTAATTTCCATCC	58.602	47.619	17.13	0.00	38.39	3.51
667	668	2.046313	CGCGCATGCTTAATTTCCATC	58.954	47.619	17.13	0.00	39.65	3.51
668	669	1.269206	CCGCGCATGCTTAATTTCCAT	60.269	47.619	17.13	0.00	39.65	3.41
669	670	0.100325	CCGCGCATGCTTAATTTCCA	59.900	50.000	17.13	0.00	39.65	3.53
670	671	1.208642	GCCGCGCATGCTTAATTTCC	61.209	55.000	17.13	0.00	39.65	3.13
671	672	0.248621	AGCCGCGCATGCTTAATTTC	60.249	50.000	17.13	0.00	39.65	2.17
672	673	0.526096	CAGCCGCGCATGCTTAATTT	60.526	50.000	17.85	0.00	36.81	1.82
673	674	1.064621	CAGCCGCGCATGCTTAATT	59.935	52.632	17.85	0.00	36.81	1.40
674	675	1.375853	TTCAGCCGCGCATGCTTAAT	61.376	50.000	17.85	0.00	36.81	1.40
675	676	2.037702	TTCAGCCGCGCATGCTTAA	61.038	52.632	17.85	13.88	36.81	1.85
676	677	2.435762	TTCAGCCGCGCATGCTTA	60.436	55.556	17.85	8.56	36.81	3.09
677	678	4.107051	GTTCAGCCGCGCATGCTT	62.107	61.111	17.85	2.39	36.81	3.91
679	680	4.824166	CTGTTCAGCCGCGCATGC	62.824	66.667	7.91	7.91	37.91	4.06
680	681	3.092192	CTCTGTTCAGCCGCGCATG	62.092	63.158	8.75	2.60	0.00	4.06
681	682	2.816958	CTCTGTTCAGCCGCGCAT	60.817	61.111	8.75	0.00	0.00	4.73
685	686	3.984193	ATGCCCTCTGTTCAGCCGC	62.984	63.158	0.00	0.00	0.00	6.53
686	687	1.817099	GATGCCCTCTGTTCAGCCG	60.817	63.158	0.00	0.00	0.00	5.52
687	688	0.034670	AAGATGCCCTCTGTTCAGCC	60.035	55.000	0.00	0.00	33.29	4.85
688	689	1.377536	GAAGATGCCCTCTGTTCAGC	58.622	55.000	0.00	0.00	33.29	4.26
689	690	1.407989	GGGAAGATGCCCTCTGTTCAG	60.408	57.143	0.00	0.00	45.12	3.02
690	691	0.620556	GGGAAGATGCCCTCTGTTCA	59.379	55.000	0.00	0.00	45.12	3.18
711	712	0.107508	CAGGGACTCGGTGAATGCAT	60.108	55.000	0.00	0.00	34.60	3.96
716	717	2.189833	CGATCAGGGACTCGGTGAA	58.810	57.895	0.00	0.00	34.60	3.18
726	727	2.092968	TGGATTCTTTCACCGATCAGGG	60.093	50.000	8.20	0.00	46.96	4.45
730	731	2.092914	ACCCTGGATTCTTTCACCGATC	60.093	50.000	0.00	0.00	0.00	3.69
759	765	3.808218	AACACCATTGCCGCCACCT	62.808	57.895	0.00	0.00	0.00	4.00
762	768	2.913765	CGAAACACCATTGCCGCCA	61.914	57.895	0.00	0.00	0.00	5.69
796	802	2.100631	CGCCGGGCTTCTACAGTTG	61.101	63.158	18.34	0.00	0.00	3.16
819	825	1.234821	TCATGCGGACAAAAGGACAC	58.765	50.000	0.00	0.00	0.00	3.67
820	826	2.198827	ATCATGCGGACAAAAGGACA	57.801	45.000	0.00	0.00	0.00	4.02
821	827	2.867429	CAATCATGCGGACAAAAGGAC	58.133	47.619	0.00	0.00	0.00	3.85
822	828	1.202114	GCAATCATGCGGACAAAAGGA	59.798	47.619	0.00	0.00	43.83	3.36
823	829	1.632422	GCAATCATGCGGACAAAAGG	58.368	50.000	0.00	0.00	43.83	3.11
846	852	1.150567	GGCTCTGACGTAGCATGCAG	61.151	60.000	21.98	13.16	41.93	4.41
847	853	1.153568	GGCTCTGACGTAGCATGCA	60.154	57.895	21.98	2.77	41.93	3.96
848	854	1.884926	GGGCTCTGACGTAGCATGC	60.885	63.158	10.51	10.51	41.93	4.06
849	855	0.807667	GTGGGCTCTGACGTAGCATG	60.808	60.000	10.75	0.00	41.93	4.06
850	856	1.257750	TGTGGGCTCTGACGTAGCAT	61.258	55.000	10.75	0.00	41.93	3.79
875	881	3.798889	GCTGTGGATGGATCATTGCATTG	60.799	47.826	2.08	2.08	33.54	2.82
876	882	2.364324	GCTGTGGATGGATCATTGCATT	59.636	45.455	0.00	0.00	33.54	3.56
877	883	1.961394	GCTGTGGATGGATCATTGCAT	59.039	47.619	0.00	0.00	36.50	3.96
947	953	2.100603	GAGGCGAAGGAGACGACG	59.899	66.667	0.00	0.00	44.04	5.12
948	954	1.716826	ATCGAGGCGAAGGAGACGAC	61.717	60.000	0.00	0.00	39.99	4.34
963	969	2.486636	AAGTGCGACTTGGCGATCGA	62.487	55.000	21.57	0.00	40.86	3.59
964	970	2.014093	GAAGTGCGACTTGGCGATCG	62.014	60.000	11.69	11.69	38.80	3.69
965	971	1.710339	GAAGTGCGACTTGGCGATC	59.290	57.895	0.00	0.00	38.80	3.69
966	972	2.094659	CGAAGTGCGACTTGGCGAT	61.095	57.895	0.00	0.00	44.57	4.58
998	1004	2.360949	CTGCACCGCTCGGATCATCT	62.361	60.000	15.95	0.00	38.96	2.90
1003	1009	4.148825	GACCTGCACCGCTCGGAT	62.149	66.667	15.95	0.00	38.96	4.18
1012	1018	1.812686	TACCTGGTGACGACCTGCAC	61.813	60.000	10.23	0.00	43.58	4.57
1036	1042	0.953960	CTCTTCCGAAACCAACCCCG	60.954	60.000	0.00	0.00	0.00	5.73
1045	1051	0.942410	CACGGCGTTCTCTTCCGAAA	60.942	55.000	11.19	0.00	45.53	3.46
1096	1117	4.235025	TGCAACACACACGCGCAG	62.235	61.111	5.73	0.55	0.00	5.18
1097	1118	4.235025	CTGCAACACACACGCGCA	62.235	61.111	5.73	0.00	0.00	6.09
1434	1467	3.065233	GCGTTATTGAGCATGATGTCCAA	59.935	43.478	0.00	0.00	0.00	3.53
1451	1484	4.823419	CCCACGATGCCGGCGTTA	62.823	66.667	24.75	4.61	40.44	3.18
1508	1541	2.158959	CATGACGGCGTCGAAGTCC	61.159	63.158	31.90	10.51	40.11	3.85
2059	5319	4.473559	AGGGTGGTGCAATACAATACTACT	59.526	41.667	0.00	0.00	0.00	2.57
2060	5320	4.777463	AGGGTGGTGCAATACAATACTAC	58.223	43.478	0.00	0.00	0.00	2.73
2061	5321	4.471747	TGAGGGTGGTGCAATACAATACTA	59.528	41.667	0.00	0.00	0.00	1.82
2063	5323	3.616219	TGAGGGTGGTGCAATACAATAC	58.384	45.455	0.00	0.00	0.00	1.89
2064	5324	4.308526	TTGAGGGTGGTGCAATACAATA	57.691	40.909	0.00	0.00	0.00	1.90
2066	5326	2.666272	TTGAGGGTGGTGCAATACAA	57.334	45.000	0.00	0.00	0.00	2.41
2067	5327	2.666272	TTTGAGGGTGGTGCAATACA	57.334	45.000	0.00	0.00	0.00	2.29
2092	5366	4.189231	ACTTCCGGTGCAATACAATACTC	58.811	43.478	0.00	0.00	0.00	2.59
2106	5380	1.749634	CTCGGTGATTCTACTTCCGGT	59.250	52.381	0.00	0.00	41.27	5.28
2186	5485	2.233605	CTCCGCATGGGGTCAACGTA	62.234	60.000	26.48	6.33	36.01	3.57
2205	5504	1.269309	CCGGCTGCTGTCATCTAGTAC	60.269	57.143	7.82	0.00	0.00	2.73
2206	5505	1.032794	CCGGCTGCTGTCATCTAGTA	58.967	55.000	7.82	0.00	0.00	1.82
2207	5506	0.684479	TCCGGCTGCTGTCATCTAGT	60.684	55.000	7.82	0.00	0.00	2.57
2216	5520	1.164411	TAACAACAATCCGGCTGCTG	58.836	50.000	0.00	0.26	0.00	4.41
2520	6964	6.460953	CCATCAACAGATGAATCAATGCATGA	60.461	38.462	0.00	0.03	42.54	3.07
2884	8469	1.366366	GTGTACTCGGCACCACAGT	59.634	57.895	0.00	0.00	0.00	3.55
2886	8471	0.394938	AATGTGTACTCGGCACCACA	59.605	50.000	0.00	0.00	41.58	4.17
2887	8472	2.373540	TAATGTGTACTCGGCACCAC	57.626	50.000	0.00	0.00	36.11	4.16
2888	8473	2.419436	CCATAATGTGTACTCGGCACCA	60.419	50.000	0.00	0.00	36.11	4.17
2890	8475	3.123804	CTCCATAATGTGTACTCGGCAC	58.876	50.000	0.00	0.00	37.37	5.01
2891	8476	3.028130	TCTCCATAATGTGTACTCGGCA	58.972	45.455	0.00	0.00	0.00	5.69
2892	8477	3.381949	GTCTCCATAATGTGTACTCGGC	58.618	50.000	0.00	0.00	0.00	5.54
2893	8478	3.066342	ACGTCTCCATAATGTGTACTCGG	59.934	47.826	0.00	0.00	0.00	4.63
2895	8480	3.797256	GCACGTCTCCATAATGTGTACTC	59.203	47.826	0.00	0.00	36.29	2.59
2896	8481	3.194755	TGCACGTCTCCATAATGTGTACT	59.805	43.478	0.00	0.00	36.29	2.73
2897	8482	3.517602	TGCACGTCTCCATAATGTGTAC	58.482	45.455	0.00	0.00	36.29	2.90
2898	8483	3.878160	TGCACGTCTCCATAATGTGTA	57.122	42.857	0.00	0.00	36.29	2.90
2899	8484	2.760634	TGCACGTCTCCATAATGTGT	57.239	45.000	0.00	0.00	36.29	3.72
2901	8486	4.333649	CAGAATTGCACGTCTCCATAATGT	59.666	41.667	0.00	0.00	0.00	2.71
2902	8487	4.333649	ACAGAATTGCACGTCTCCATAATG	59.666	41.667	0.00	0.00	0.00	1.90
2903	8488	4.517285	ACAGAATTGCACGTCTCCATAAT	58.483	39.130	0.00	0.00	0.00	1.28
2904	8489	3.932710	GACAGAATTGCACGTCTCCATAA	59.067	43.478	0.00	0.00	0.00	1.90
2905	8490	3.195610	AGACAGAATTGCACGTCTCCATA	59.804	43.478	0.00	0.00	33.49	2.74
2907	8492	1.344438	AGACAGAATTGCACGTCTCCA	59.656	47.619	0.00	0.00	33.49	3.86
2909	8494	2.156504	CACAGACAGAATTGCACGTCTC	59.843	50.000	0.00	0.00	36.60	3.36
2911	8496	1.867233	ACACAGACAGAATTGCACGTC	59.133	47.619	0.00	0.00	0.00	4.34
2912	8497	1.867233	GACACAGACAGAATTGCACGT	59.133	47.619	0.00	0.00	0.00	4.49
2914	8499	3.397482	AGAGACACAGACAGAATTGCAC	58.603	45.455	0.00	0.00	0.00	4.57
2915	8500	3.758755	AGAGACACAGACAGAATTGCA	57.241	42.857	0.00	0.00	0.00	4.08
2917	8502	5.063186	GCACATAGAGACACAGACAGAATTG	59.937	44.000	0.00	0.00	0.00	2.32
2918	8503	5.174395	GCACATAGAGACACAGACAGAATT	58.826	41.667	0.00	0.00	0.00	2.17
2920	8505	3.573967	TGCACATAGAGACACAGACAGAA	59.426	43.478	0.00	0.00	0.00	3.02
2921	8506	3.157087	TGCACATAGAGACACAGACAGA	58.843	45.455	0.00	0.00	0.00	3.41
2922	8507	3.582714	TGCACATAGAGACACAGACAG	57.417	47.619	0.00	0.00	0.00	3.51
2923	8508	3.853475	CATGCACATAGAGACACAGACA	58.147	45.455	0.00	0.00	0.00	3.41
2924	8509	2.606725	GCATGCACATAGAGACACAGAC	59.393	50.000	14.21	0.00	0.00	3.51
2925	8510	2.234414	TGCATGCACATAGAGACACAGA	59.766	45.455	18.46	0.00	0.00	3.41
2926	8511	2.350804	GTGCATGCACATAGAGACACAG	59.649	50.000	39.12	0.00	45.53	3.66
2927	8512	2.349590	GTGCATGCACATAGAGACACA	58.650	47.619	39.12	3.53	45.53	3.72
2938	8523	2.176273	CGCCTCCTAGTGCATGCAC	61.176	63.158	37.87	37.87	46.50	4.57
2939	8524	1.689243	ATCGCCTCCTAGTGCATGCA	61.689	55.000	18.46	18.46	0.00	3.96
2940	8525	0.318441	TATCGCCTCCTAGTGCATGC	59.682	55.000	11.82	11.82	0.00	4.06
2942	8527	2.294449	TCTATCGCCTCCTAGTGCAT	57.706	50.000	0.00	0.00	0.00	3.96
2943	8528	2.163509	GATCTATCGCCTCCTAGTGCA	58.836	52.381	0.00	0.00	0.00	4.57
2944	8529	1.131504	CGATCTATCGCCTCCTAGTGC	59.868	57.143	0.00	0.00	43.84	4.40
2956	8541	9.562583	GACTTGTTGAATATAGTCCGATCTATC	57.437	37.037	0.00	0.00	32.74	2.08
2958	8543	7.308408	CCGACTTGTTGAATATAGTCCGATCTA	60.308	40.741	0.00	0.00	34.86	1.98
2959	8544	6.439599	CGACTTGTTGAATATAGTCCGATCT	58.560	40.000	0.00	0.00	34.86	2.75
2961	8546	5.509163	CCCGACTTGTTGAATATAGTCCGAT	60.509	44.000	0.00	0.00	34.86	4.18
2962	8547	4.202080	CCCGACTTGTTGAATATAGTCCGA	60.202	45.833	0.00	0.00	34.86	4.55
2964	8549	5.272283	TCCCGACTTGTTGAATATAGTCC	57.728	43.478	0.00	0.00	34.86	3.85
2965	8550	6.281405	ACATCCCGACTTGTTGAATATAGTC	58.719	40.000	0.00	0.00	34.96	2.59
2968	8553	5.068067	TCGACATCCCGACTTGTTGAATATA	59.932	40.000	0.00	0.00	34.17	0.86
2969	8554	4.119862	CGACATCCCGACTTGTTGAATAT	58.880	43.478	0.00	0.00	30.17	1.28
2970	8555	3.193903	TCGACATCCCGACTTGTTGAATA	59.806	43.478	0.00	0.00	34.17	1.75
2971	8556	2.028476	TCGACATCCCGACTTGTTGAAT	60.028	45.455	0.00	0.00	34.17	2.57
2972	8557	1.341852	TCGACATCCCGACTTGTTGAA	59.658	47.619	0.00	0.00	34.17	2.69
2973	8558	0.963225	TCGACATCCCGACTTGTTGA	59.037	50.000	0.00	0.00	34.60	3.18
2974	8559	3.507597	TCGACATCCCGACTTGTTG	57.492	52.632	0.00	0.00	33.14	3.33
2981	8566	0.681887	TTGCTAGGTCGACATCCCGA	60.682	55.000	18.91	1.84	36.06	5.14
2982	8567	0.389391	ATTGCTAGGTCGACATCCCG	59.611	55.000	18.91	3.84	0.00	5.14
2983	8568	1.412710	TCATTGCTAGGTCGACATCCC	59.587	52.381	18.91	5.49	0.00	3.85
2984	8569	2.890808	TCATTGCTAGGTCGACATCC	57.109	50.000	18.91	5.87	0.00	3.51

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.