Multiple sequence alignment - TraesCS2A01G115700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G115700 | chr2A | 100.000 | 3110 | 0 | 0 | 1 | 3110 | 66005481 | 66002372 | 0.000000e+00 | 5744.0 |
1 | TraesCS2A01G115700 | chr2A | 92.954 | 1405 | 67 | 18 | 732 | 2112 | 65954238 | 65952842 | 0.000000e+00 | 2017.0 |
2 | TraesCS2A01G115700 | chr2A | 84.541 | 621 | 81 | 5 | 2499 | 3109 | 44772951 | 44772336 | 4.440000e-168 | 601.0 |
3 | TraesCS2A01G115700 | chr2A | 84.843 | 607 | 76 | 6 | 2513 | 3109 | 44771572 | 44770972 | 5.740000e-167 | 597.0 |
4 | TraesCS2A01G115700 | chr2A | 85.986 | 578 | 36 | 19 | 46 | 615 | 65954926 | 65954386 | 7.480000e-161 | 577.0 |
5 | TraesCS2A01G115700 | chr2A | 78.470 | 771 | 106 | 34 | 955 | 1686 | 66909636 | 66908887 | 1.700000e-122 | 449.0 |
6 | TraesCS2A01G115700 | chr2A | 79.765 | 682 | 85 | 30 | 1036 | 1688 | 66915218 | 66914561 | 2.200000e-121 | 446.0 |
7 | TraesCS2A01G115700 | chr2A | 97.297 | 111 | 3 | 0 | 2438 | 2548 | 66002940 | 66002830 | 4.090000e-44 | 189.0 |
8 | TraesCS2A01G115700 | chr2A | 97.297 | 111 | 3 | 0 | 2542 | 2652 | 66003044 | 66002934 | 4.090000e-44 | 189.0 |
9 | TraesCS2A01G115700 | chr2A | 81.250 | 128 | 22 | 2 | 201 | 326 | 738028835 | 738028708 | 5.490000e-18 | 102.0 |
10 | TraesCS2A01G115700 | chr2B | 91.398 | 1395 | 81 | 20 | 734 | 2113 | 101543482 | 101542112 | 0.000000e+00 | 1875.0 |
11 | TraesCS2A01G115700 | chr2B | 88.316 | 659 | 38 | 13 | 4 | 628 | 101544171 | 101543518 | 0.000000e+00 | 754.0 |
12 | TraesCS2A01G115700 | chr2B | 86.596 | 567 | 74 | 2 | 2542 | 3108 | 67944511 | 67943947 | 2.630000e-175 | 625.0 |
13 | TraesCS2A01G115700 | chr2B | 78.418 | 885 | 112 | 41 | 845 | 1688 | 103956347 | 103955501 | 1.290000e-138 | 503.0 |
14 | TraesCS2A01G115700 | chr2B | 78.696 | 859 | 104 | 49 | 877 | 1688 | 103845839 | 103845013 | 1.670000e-137 | 499.0 |
15 | TraesCS2A01G115700 | chr2B | 77.480 | 1008 | 112 | 62 | 751 | 1690 | 104052989 | 104052029 | 5.990000e-137 | 497.0 |
16 | TraesCS2A01G115700 | chr2B | 78.016 | 887 | 118 | 43 | 845 | 1688 | 103901174 | 103900322 | 1.300000e-133 | 486.0 |
17 | TraesCS2A01G115700 | chr2B | 88.764 | 356 | 31 | 4 | 2697 | 3044 | 67922419 | 67922065 | 7.970000e-116 | 427.0 |
18 | TraesCS2A01G115700 | chr2B | 78.136 | 558 | 65 | 26 | 1036 | 1559 | 104019275 | 104018741 | 5.040000e-78 | 302.0 |
19 | TraesCS2A01G115700 | chr2B | 77.218 | 417 | 45 | 28 | 877 | 1270 | 103709570 | 103709181 | 6.800000e-47 | 198.0 |
20 | TraesCS2A01G115700 | chr2B | 88.889 | 144 | 16 | 0 | 2151 | 2294 | 519598861 | 519599004 | 8.860000e-41 | 178.0 |
21 | TraesCS2A01G115700 | chr2B | 92.857 | 42 | 3 | 0 | 2111 | 2152 | 101977768 | 101977727 | 9.310000e-06 | 62.1 |
22 | TraesCS2A01G115700 | chr2B | 100.000 | 29 | 0 | 0 | 710 | 738 | 101543519 | 101543491 | 2.000000e-03 | 54.7 |
23 | TraesCS2A01G115700 | chr2D | 93.465 | 964 | 47 | 8 | 728 | 1681 | 69028894 | 69027937 | 0.000000e+00 | 1417.0 |
24 | TraesCS2A01G115700 | chr2D | 92.089 | 632 | 36 | 11 | 4 | 628 | 69029548 | 69028924 | 0.000000e+00 | 878.0 |
25 | TraesCS2A01G115700 | chr2D | 90.158 | 569 | 56 | 0 | 2542 | 3110 | 40828287 | 40827719 | 0.000000e+00 | 741.0 |
26 | TraesCS2A01G115700 | chr2D | 85.085 | 590 | 75 | 5 | 2530 | 3109 | 43240468 | 43239882 | 9.610000e-165 | 590.0 |
27 | TraesCS2A01G115700 | chr2D | 79.209 | 885 | 123 | 38 | 833 | 1686 | 67447829 | 67448683 | 2.710000e-155 | 558.0 |
28 | TraesCS2A01G115700 | chr2D | 92.954 | 369 | 19 | 2 | 1746 | 2110 | 69027935 | 69027570 | 5.910000e-147 | 531.0 |
29 | TraesCS2A01G115700 | chr2D | 77.311 | 714 | 83 | 46 | 1026 | 1688 | 67442688 | 67443373 | 6.380000e-92 | 348.0 |
30 | TraesCS2A01G115700 | chr2D | 90.826 | 218 | 16 | 2 | 1 | 218 | 68811484 | 68811697 | 3.920000e-74 | 289.0 |
31 | TraesCS2A01G115700 | chr2D | 94.186 | 86 | 5 | 0 | 627 | 712 | 564921773 | 564921688 | 7.000000e-27 | 132.0 |
32 | TraesCS2A01G115700 | chr2D | 93.976 | 83 | 4 | 1 | 372 | 454 | 68855648 | 68855729 | 1.170000e-24 | 124.0 |
33 | TraesCS2A01G115700 | chr2D | 74.390 | 328 | 62 | 16 | 1249 | 1571 | 68905035 | 68904725 | 1.510000e-23 | 121.0 |
34 | TraesCS2A01G115700 | chr7D | 89.510 | 143 | 15 | 0 | 2151 | 2293 | 363148833 | 363148975 | 6.850000e-42 | 182.0 |
35 | TraesCS2A01G115700 | chr7D | 88.356 | 146 | 17 | 0 | 2148 | 2293 | 529915464 | 529915609 | 3.190000e-40 | 176.0 |
36 | TraesCS2A01G115700 | chr7A | 89.510 | 143 | 15 | 0 | 2151 | 2293 | 717441321 | 717441179 | 6.850000e-42 | 182.0 |
37 | TraesCS2A01G115700 | chr7A | 88.811 | 143 | 16 | 0 | 2151 | 2293 | 16718366 | 16718224 | 3.190000e-40 | 176.0 |
38 | TraesCS2A01G115700 | chr7A | 88.811 | 143 | 16 | 0 | 2151 | 2293 | 643187054 | 643186912 | 3.190000e-40 | 176.0 |
39 | TraesCS2A01G115700 | chr5A | 89.510 | 143 | 15 | 0 | 2151 | 2293 | 367790241 | 367790099 | 6.850000e-42 | 182.0 |
40 | TraesCS2A01G115700 | chr5A | 88.732 | 142 | 16 | 0 | 2147 | 2288 | 668081761 | 668081902 | 1.150000e-39 | 174.0 |
41 | TraesCS2A01G115700 | chr5B | 88.811 | 143 | 16 | 0 | 2151 | 2293 | 262533786 | 262533644 | 3.190000e-40 | 176.0 |
42 | TraesCS2A01G115700 | chr4A | 75.472 | 371 | 72 | 16 | 4 | 370 | 631905181 | 631904826 | 2.480000e-36 | 163.0 |
43 | TraesCS2A01G115700 | chr4A | 89.000 | 100 | 11 | 0 | 619 | 718 | 584810957 | 584810858 | 1.170000e-24 | 124.0 |
44 | TraesCS2A01G115700 | chr4D | 96.471 | 85 | 3 | 0 | 627 | 711 | 469582356 | 469582272 | 1.160000e-29 | 141.0 |
45 | TraesCS2A01G115700 | chr1A | 95.402 | 87 | 4 | 0 | 626 | 712 | 12556266 | 12556180 | 4.180000e-29 | 139.0 |
46 | TraesCS2A01G115700 | chr3D | 95.349 | 86 | 4 | 0 | 626 | 711 | 400684028 | 400683943 | 1.500000e-28 | 137.0 |
47 | TraesCS2A01G115700 | chr4B | 94.318 | 88 | 5 | 0 | 627 | 714 | 673204474 | 673204561 | 5.410000e-28 | 135.0 |
48 | TraesCS2A01G115700 | chr4B | 94.118 | 85 | 5 | 0 | 627 | 711 | 590440315 | 590440231 | 2.520000e-26 | 130.0 |
49 | TraesCS2A01G115700 | chr3B | 95.294 | 85 | 4 | 0 | 627 | 711 | 284678927 | 284678843 | 5.410000e-28 | 135.0 |
50 | TraesCS2A01G115700 | chr6A | 93.182 | 88 | 6 | 0 | 627 | 714 | 93285704 | 93285791 | 2.520000e-26 | 130.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G115700 | chr2A | 66002372 | 66005481 | 3109 | True | 2040.666667 | 5744 | 98.198 | 1 | 3110 | 3 | chr2A.!!$R6 | 3109 |
1 | TraesCS2A01G115700 | chr2A | 65952842 | 65954926 | 2084 | True | 1297.000000 | 2017 | 89.470 | 46 | 2112 | 2 | chr2A.!!$R5 | 2066 |
2 | TraesCS2A01G115700 | chr2A | 44770972 | 44772951 | 1979 | True | 599.000000 | 601 | 84.692 | 2499 | 3109 | 2 | chr2A.!!$R4 | 610 |
3 | TraesCS2A01G115700 | chr2A | 66908887 | 66909636 | 749 | True | 449.000000 | 449 | 78.470 | 955 | 1686 | 1 | chr2A.!!$R1 | 731 |
4 | TraesCS2A01G115700 | chr2A | 66914561 | 66915218 | 657 | True | 446.000000 | 446 | 79.765 | 1036 | 1688 | 1 | chr2A.!!$R2 | 652 |
5 | TraesCS2A01G115700 | chr2B | 101542112 | 101544171 | 2059 | True | 894.566667 | 1875 | 93.238 | 4 | 2113 | 3 | chr2B.!!$R10 | 2109 |
6 | TraesCS2A01G115700 | chr2B | 67943947 | 67944511 | 564 | True | 625.000000 | 625 | 86.596 | 2542 | 3108 | 1 | chr2B.!!$R2 | 566 |
7 | TraesCS2A01G115700 | chr2B | 103955501 | 103956347 | 846 | True | 503.000000 | 503 | 78.418 | 845 | 1688 | 1 | chr2B.!!$R7 | 843 |
8 | TraesCS2A01G115700 | chr2B | 103845013 | 103845839 | 826 | True | 499.000000 | 499 | 78.696 | 877 | 1688 | 1 | chr2B.!!$R5 | 811 |
9 | TraesCS2A01G115700 | chr2B | 104052029 | 104052989 | 960 | True | 497.000000 | 497 | 77.480 | 751 | 1690 | 1 | chr2B.!!$R9 | 939 |
10 | TraesCS2A01G115700 | chr2B | 103900322 | 103901174 | 852 | True | 486.000000 | 486 | 78.016 | 845 | 1688 | 1 | chr2B.!!$R6 | 843 |
11 | TraesCS2A01G115700 | chr2B | 104018741 | 104019275 | 534 | True | 302.000000 | 302 | 78.136 | 1036 | 1559 | 1 | chr2B.!!$R8 | 523 |
12 | TraesCS2A01G115700 | chr2D | 69027570 | 69029548 | 1978 | True | 942.000000 | 1417 | 92.836 | 4 | 2110 | 3 | chr2D.!!$R5 | 2106 |
13 | TraesCS2A01G115700 | chr2D | 40827719 | 40828287 | 568 | True | 741.000000 | 741 | 90.158 | 2542 | 3110 | 1 | chr2D.!!$R1 | 568 |
14 | TraesCS2A01G115700 | chr2D | 43239882 | 43240468 | 586 | True | 590.000000 | 590 | 85.085 | 2530 | 3109 | 1 | chr2D.!!$R2 | 579 |
15 | TraesCS2A01G115700 | chr2D | 67447829 | 67448683 | 854 | False | 558.000000 | 558 | 79.209 | 833 | 1686 | 1 | chr2D.!!$F2 | 853 |
16 | TraesCS2A01G115700 | chr2D | 67442688 | 67443373 | 685 | False | 348.000000 | 348 | 77.311 | 1026 | 1688 | 1 | chr2D.!!$F1 | 662 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
37 | 38 | 1.281867 | TGAAACACCAGCTATCAGGGG | 59.718 | 52.381 | 0.00 | 0.0 | 0.0 | 4.79 | F |
118 | 119 | 1.575419 | AGGTGGCCATTGATGCAAAT | 58.425 | 45.000 | 9.72 | 0.0 | 0.0 | 2.32 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1007 | 1210 | 1.926511 | AATGTGCGCAACAGCTAGCC | 61.927 | 55.000 | 14.00 | 0.0 | 43.64 | 3.93 | R |
2113 | 2418 | 2.232941 | ACCAAATGAAATCAGCTGCAGG | 59.767 | 45.455 | 17.12 | 0.0 | 0.00 | 4.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
37 | 38 | 1.281867 | TGAAACACCAGCTATCAGGGG | 59.718 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
60 | 61 | 4.277515 | GCACATGCCCTATCAGAAGATA | 57.722 | 45.455 | 0.00 | 0.00 | 33.61 | 1.98 |
118 | 119 | 1.575419 | AGGTGGCCATTGATGCAAAT | 58.425 | 45.000 | 9.72 | 0.00 | 0.00 | 2.32 |
119 | 120 | 2.749600 | AGGTGGCCATTGATGCAAATA | 58.250 | 42.857 | 9.72 | 0.00 | 0.00 | 1.40 |
131 | 132 | 7.179694 | CCATTGATGCAAATATAAGGAGGGAAT | 59.820 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
144 | 145 | 3.075134 | AGGAGGGAATCTCAGCAAGTTTT | 59.925 | 43.478 | 0.00 | 0.00 | 44.19 | 2.43 |
294 | 304 | 4.503296 | GGCGTCATGTCTGGTTAGGATATT | 60.503 | 45.833 | 0.00 | 0.00 | 0.00 | 1.28 |
327 | 337 | 5.408880 | TGTATTCGTCCCTGTAAACATCA | 57.591 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
521 | 562 | 9.950680 | TGTAAGTTCAGTTTGAGAAATGATTTC | 57.049 | 29.630 | 9.82 | 9.82 | 39.34 | 2.17 |
539 | 582 | 7.149569 | TGATTTCTTTTCTTAGGTGCTCATG | 57.850 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
557 | 601 | 5.632347 | GCTCATGTTTTCTGTCCTTCAATTG | 59.368 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
631 | 736 | 9.853177 | TGTTACCTACTAGTTATTACCTACTCC | 57.147 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
632 | 737 | 9.290988 | GTTACCTACTAGTTATTACCTACTCCC | 57.709 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
633 | 738 | 7.719967 | ACCTACTAGTTATTACCTACTCCCT | 57.280 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
634 | 739 | 7.754624 | ACCTACTAGTTATTACCTACTCCCTC | 58.245 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
635 | 740 | 7.174413 | CCTACTAGTTATTACCTACTCCCTCC | 58.826 | 46.154 | 0.00 | 0.00 | 0.00 | 4.30 |
636 | 741 | 5.629125 | ACTAGTTATTACCTACTCCCTCCG | 58.371 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
637 | 742 | 4.533001 | AGTTATTACCTACTCCCTCCGT | 57.467 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
638 | 743 | 5.653255 | AGTTATTACCTACTCCCTCCGTA | 57.347 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
639 | 744 | 6.018433 | AGTTATTACCTACTCCCTCCGTAA | 57.982 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
640 | 745 | 6.435164 | AGTTATTACCTACTCCCTCCGTAAA | 58.565 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
641 | 746 | 6.548993 | AGTTATTACCTACTCCCTCCGTAAAG | 59.451 | 42.308 | 0.00 | 0.00 | 0.00 | 1.85 |
642 | 747 | 4.591321 | TTACCTACTCCCTCCGTAAAGA | 57.409 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
643 | 748 | 3.463048 | ACCTACTCCCTCCGTAAAGAA | 57.537 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
644 | 749 | 3.782992 | ACCTACTCCCTCCGTAAAGAAA | 58.217 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
645 | 750 | 4.359996 | ACCTACTCCCTCCGTAAAGAAAT | 58.640 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
646 | 751 | 5.522641 | ACCTACTCCCTCCGTAAAGAAATA | 58.477 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
647 | 752 | 6.141790 | ACCTACTCCCTCCGTAAAGAAATAT | 58.858 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
648 | 753 | 7.300658 | ACCTACTCCCTCCGTAAAGAAATATA | 58.699 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
649 | 754 | 7.786464 | ACCTACTCCCTCCGTAAAGAAATATAA | 59.214 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
650 | 755 | 8.087136 | CCTACTCCCTCCGTAAAGAAATATAAC | 58.913 | 40.741 | 0.00 | 0.00 | 0.00 | 1.89 |
651 | 756 | 7.427989 | ACTCCCTCCGTAAAGAAATATAACA | 57.572 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
652 | 757 | 7.498443 | ACTCCCTCCGTAAAGAAATATAACAG | 58.502 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
653 | 758 | 6.285990 | TCCCTCCGTAAAGAAATATAACAGC | 58.714 | 40.000 | 0.00 | 0.00 | 0.00 | 4.40 |
654 | 759 | 5.176958 | CCCTCCGTAAAGAAATATAACAGCG | 59.823 | 44.000 | 0.00 | 0.00 | 0.00 | 5.18 |
655 | 760 | 5.751990 | CCTCCGTAAAGAAATATAACAGCGT | 59.248 | 40.000 | 0.00 | 0.00 | 0.00 | 5.07 |
656 | 761 | 6.257193 | CCTCCGTAAAGAAATATAACAGCGTT | 59.743 | 38.462 | 0.02 | 0.02 | 0.00 | 4.84 |
657 | 762 | 7.201582 | CCTCCGTAAAGAAATATAACAGCGTTT | 60.202 | 37.037 | 0.00 | 0.00 | 0.00 | 3.60 |
658 | 763 | 8.700722 | TCCGTAAAGAAATATAACAGCGTTTA | 57.299 | 30.769 | 0.00 | 0.00 | 0.00 | 2.01 |
659 | 764 | 9.316730 | TCCGTAAAGAAATATAACAGCGTTTAT | 57.683 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
706 | 811 | 8.943909 | ACGTTCTTATATTTCTTTACAGAGGG | 57.056 | 34.615 | 0.00 | 0.00 | 0.00 | 4.30 |
707 | 812 | 8.755977 | ACGTTCTTATATTTCTTTACAGAGGGA | 58.244 | 33.333 | 0.00 | 0.00 | 0.00 | 4.20 |
708 | 813 | 9.250624 | CGTTCTTATATTTCTTTACAGAGGGAG | 57.749 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
768 | 931 | 3.807538 | GCATGCAGCTGGTCCACG | 61.808 | 66.667 | 17.12 | 0.00 | 41.15 | 4.94 |
915 | 1086 | 5.731591 | AGCAACCTAACAGTCCTATACAAC | 58.268 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
1032 | 1244 | 1.401530 | CTGTTGCGCACATTCTGTTG | 58.598 | 50.000 | 11.12 | 0.00 | 33.76 | 3.33 |
1033 | 1245 | 1.002576 | CTGTTGCGCACATTCTGTTGA | 60.003 | 47.619 | 11.12 | 0.00 | 33.76 | 3.18 |
1034 | 1246 | 1.403323 | TGTTGCGCACATTCTGTTGAA | 59.597 | 42.857 | 11.12 | 0.00 | 36.54 | 2.69 |
1056 | 1268 | 3.131046 | AGAAATTTCCATTGGCATCGGAC | 59.869 | 43.478 | 14.61 | 0.00 | 0.00 | 4.79 |
1115 | 1335 | 3.371097 | TTGGAGCAGCCGATCGACC | 62.371 | 63.158 | 18.66 | 7.18 | 40.66 | 4.79 |
1430 | 1702 | 2.645411 | CGTGGGACGATACGTTCAC | 58.355 | 57.895 | 0.00 | 15.58 | 46.05 | 3.18 |
1656 | 1949 | 4.155733 | CGGGGCATGCTCACCGTA | 62.156 | 66.667 | 28.37 | 0.00 | 41.34 | 4.02 |
1664 | 1957 | 1.317431 | ATGCTCACCGTAGCGTACCA | 61.317 | 55.000 | 0.00 | 0.00 | 45.85 | 3.25 |
1719 | 2018 | 2.358737 | GGGTTGTGCTGGGACGAG | 60.359 | 66.667 | 0.00 | 0.00 | 0.00 | 4.18 |
2002 | 2301 | 4.680237 | CGGACAAGGCGGCTCACA | 62.680 | 66.667 | 13.70 | 0.00 | 0.00 | 3.58 |
2114 | 2419 | 9.673454 | AAGTACGTCAAACTTGAATAAAAATCC | 57.327 | 29.630 | 1.45 | 0.00 | 39.21 | 3.01 |
2115 | 2420 | 9.063615 | AGTACGTCAAACTTGAATAAAAATCCT | 57.936 | 29.630 | 0.00 | 0.00 | 39.21 | 3.24 |
2116 | 2421 | 9.113876 | GTACGTCAAACTTGAATAAAAATCCTG | 57.886 | 33.333 | 0.00 | 0.00 | 39.21 | 3.86 |
2117 | 2422 | 6.640907 | ACGTCAAACTTGAATAAAAATCCTGC | 59.359 | 34.615 | 0.00 | 0.00 | 39.21 | 4.85 |
2118 | 2423 | 6.640499 | CGTCAAACTTGAATAAAAATCCTGCA | 59.360 | 34.615 | 0.00 | 0.00 | 39.21 | 4.41 |
2119 | 2424 | 7.148918 | CGTCAAACTTGAATAAAAATCCTGCAG | 60.149 | 37.037 | 6.78 | 6.78 | 39.21 | 4.41 |
2120 | 2425 | 6.646240 | TCAAACTTGAATAAAAATCCTGCAGC | 59.354 | 34.615 | 8.66 | 0.00 | 33.55 | 5.25 |
2121 | 2426 | 5.990120 | ACTTGAATAAAAATCCTGCAGCT | 57.010 | 34.783 | 8.66 | 0.00 | 0.00 | 4.24 |
2122 | 2427 | 5.717119 | ACTTGAATAAAAATCCTGCAGCTG | 58.283 | 37.500 | 10.11 | 10.11 | 0.00 | 4.24 |
2123 | 2428 | 5.477984 | ACTTGAATAAAAATCCTGCAGCTGA | 59.522 | 36.000 | 20.43 | 0.87 | 0.00 | 4.26 |
2124 | 2429 | 6.154021 | ACTTGAATAAAAATCCTGCAGCTGAT | 59.846 | 34.615 | 20.43 | 3.68 | 0.00 | 2.90 |
2125 | 2430 | 6.534475 | TGAATAAAAATCCTGCAGCTGATT | 57.466 | 33.333 | 20.43 | 10.24 | 32.72 | 2.57 |
2126 | 2431 | 6.938507 | TGAATAAAAATCCTGCAGCTGATTT | 58.061 | 32.000 | 20.43 | 19.36 | 41.63 | 2.17 |
2127 | 2432 | 7.037438 | TGAATAAAAATCCTGCAGCTGATTTC | 58.963 | 34.615 | 23.02 | 14.82 | 39.59 | 2.17 |
2128 | 2433 | 4.877378 | AAAAATCCTGCAGCTGATTTCA | 57.123 | 36.364 | 23.02 | 4.56 | 39.59 | 2.69 |
2129 | 2434 | 5.416271 | AAAAATCCTGCAGCTGATTTCAT | 57.584 | 34.783 | 23.02 | 15.72 | 39.59 | 2.57 |
2130 | 2435 | 5.416271 | AAAATCCTGCAGCTGATTTCATT | 57.584 | 34.783 | 23.02 | 11.20 | 39.59 | 2.57 |
2131 | 2436 | 5.416271 | AAATCCTGCAGCTGATTTCATTT | 57.584 | 34.783 | 20.43 | 11.04 | 36.69 | 2.32 |
2132 | 2437 | 3.861276 | TCCTGCAGCTGATTTCATTTG | 57.139 | 42.857 | 20.43 | 0.00 | 0.00 | 2.32 |
2133 | 2438 | 2.494471 | TCCTGCAGCTGATTTCATTTGG | 59.506 | 45.455 | 20.43 | 3.79 | 0.00 | 3.28 |
2134 | 2439 | 2.232941 | CCTGCAGCTGATTTCATTTGGT | 59.767 | 45.455 | 20.43 | 0.00 | 0.00 | 3.67 |
2135 | 2440 | 3.508762 | CTGCAGCTGATTTCATTTGGTC | 58.491 | 45.455 | 20.43 | 0.00 | 0.00 | 4.02 |
2136 | 2441 | 3.159472 | TGCAGCTGATTTCATTTGGTCT | 58.841 | 40.909 | 20.43 | 0.00 | 0.00 | 3.85 |
2137 | 2442 | 3.057104 | TGCAGCTGATTTCATTTGGTCTG | 60.057 | 43.478 | 20.43 | 0.00 | 0.00 | 3.51 |
2138 | 2443 | 3.192001 | GCAGCTGATTTCATTTGGTCTGA | 59.808 | 43.478 | 20.43 | 0.00 | 0.00 | 3.27 |
2139 | 2444 | 4.674623 | GCAGCTGATTTCATTTGGTCTGAG | 60.675 | 45.833 | 20.43 | 0.00 | 0.00 | 3.35 |
2140 | 2445 | 4.698780 | CAGCTGATTTCATTTGGTCTGAGA | 59.301 | 41.667 | 8.42 | 0.00 | 0.00 | 3.27 |
2141 | 2446 | 5.357314 | CAGCTGATTTCATTTGGTCTGAGAT | 59.643 | 40.000 | 8.42 | 0.00 | 0.00 | 2.75 |
2142 | 2447 | 5.950549 | AGCTGATTTCATTTGGTCTGAGATT | 59.049 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
2143 | 2448 | 6.436532 | AGCTGATTTCATTTGGTCTGAGATTT | 59.563 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
2144 | 2449 | 7.039223 | AGCTGATTTCATTTGGTCTGAGATTTT | 60.039 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2145 | 2450 | 7.275123 | GCTGATTTCATTTGGTCTGAGATTTTC | 59.725 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
2146 | 2451 | 7.307694 | TGATTTCATTTGGTCTGAGATTTTCG | 58.692 | 34.615 | 0.00 | 0.00 | 0.00 | 3.46 |
2147 | 2452 | 6.633500 | TTTCATTTGGTCTGAGATTTTCGT | 57.367 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
2148 | 2453 | 7.737972 | TTTCATTTGGTCTGAGATTTTCGTA | 57.262 | 32.000 | 0.00 | 0.00 | 0.00 | 3.43 |
2149 | 2454 | 7.921786 | TTCATTTGGTCTGAGATTTTCGTAT | 57.078 | 32.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2150 | 2455 | 7.921786 | TCATTTGGTCTGAGATTTTCGTATT | 57.078 | 32.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2151 | 2456 | 9.443323 | TTCATTTGGTCTGAGATTTTCGTATTA | 57.557 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
2152 | 2457 | 8.879759 | TCATTTGGTCTGAGATTTTCGTATTAC | 58.120 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
2153 | 2458 | 8.883731 | CATTTGGTCTGAGATTTTCGTATTACT | 58.116 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2154 | 2459 | 8.475331 | TTTGGTCTGAGATTTTCGTATTACTC | 57.525 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
2155 | 2460 | 6.570692 | TGGTCTGAGATTTTCGTATTACTCC | 58.429 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2156 | 2461 | 5.984323 | GGTCTGAGATTTTCGTATTACTCCC | 59.016 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2157 | 2462 | 6.183360 | GGTCTGAGATTTTCGTATTACTCCCT | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 4.20 |
2158 | 2463 | 7.266400 | GTCTGAGATTTTCGTATTACTCCCTT | 58.734 | 38.462 | 0.00 | 0.00 | 0.00 | 3.95 |
2159 | 2464 | 7.435784 | GTCTGAGATTTTCGTATTACTCCCTTC | 59.564 | 40.741 | 0.00 | 0.00 | 0.00 | 3.46 |
2160 | 2465 | 6.270815 | TGAGATTTTCGTATTACTCCCTTCG | 58.729 | 40.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2161 | 2466 | 6.127535 | TGAGATTTTCGTATTACTCCCTTCGT | 60.128 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
2162 | 2467 | 6.637657 | AGATTTTCGTATTACTCCCTTCGTT | 58.362 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2163 | 2468 | 7.101700 | AGATTTTCGTATTACTCCCTTCGTTT | 58.898 | 34.615 | 0.00 | 0.00 | 0.00 | 3.60 |
2164 | 2469 | 6.710692 | TTTTCGTATTACTCCCTTCGTTTC | 57.289 | 37.500 | 0.00 | 0.00 | 0.00 | 2.78 |
2165 | 2470 | 5.649782 | TTCGTATTACTCCCTTCGTTTCT | 57.350 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
2166 | 2471 | 6.757897 | TTCGTATTACTCCCTTCGTTTCTA | 57.242 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
2167 | 2472 | 6.757897 | TCGTATTACTCCCTTCGTTTCTAA | 57.242 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
2168 | 2473 | 7.156876 | TCGTATTACTCCCTTCGTTTCTAAA | 57.843 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2169 | 2474 | 7.775120 | TCGTATTACTCCCTTCGTTTCTAAAT | 58.225 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
2170 | 2475 | 8.902806 | TCGTATTACTCCCTTCGTTTCTAAATA | 58.097 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2171 | 2476 | 9.688592 | CGTATTACTCCCTTCGTTTCTAAATAT | 57.311 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
2248 | 2553 | 9.690434 | CTTATTTTAGAGTGTTGATTTACTCGC | 57.310 | 33.333 | 0.00 | 0.00 | 46.05 | 5.03 |
2249 | 2554 | 7.907214 | ATTTTAGAGTGTTGATTTACTCGCT | 57.093 | 32.000 | 0.00 | 0.00 | 46.05 | 4.93 |
2250 | 2555 | 7.724305 | TTTTAGAGTGTTGATTTACTCGCTT | 57.276 | 32.000 | 0.00 | 0.00 | 46.05 | 4.68 |
2251 | 2556 | 7.724305 | TTTAGAGTGTTGATTTACTCGCTTT | 57.276 | 32.000 | 0.00 | 0.00 | 46.05 | 3.51 |
2252 | 2557 | 5.597813 | AGAGTGTTGATTTACTCGCTTTG | 57.402 | 39.130 | 0.00 | 0.00 | 46.05 | 2.77 |
2253 | 2558 | 4.083802 | AGAGTGTTGATTTACTCGCTTTGC | 60.084 | 41.667 | 0.00 | 0.00 | 46.05 | 3.68 |
2254 | 2559 | 3.815401 | AGTGTTGATTTACTCGCTTTGCT | 59.185 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
2255 | 2560 | 4.083802 | AGTGTTGATTTACTCGCTTTGCTC | 60.084 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
2256 | 2561 | 3.188460 | TGTTGATTTACTCGCTTTGCTCC | 59.812 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
2257 | 2562 | 1.999735 | TGATTTACTCGCTTTGCTCCG | 59.000 | 47.619 | 0.00 | 0.00 | 0.00 | 4.63 |
2258 | 2563 | 2.000447 | GATTTACTCGCTTTGCTCCGT | 59.000 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
2259 | 2564 | 2.728690 | TTTACTCGCTTTGCTCCGTA | 57.271 | 45.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2260 | 2565 | 2.953466 | TTACTCGCTTTGCTCCGTAT | 57.047 | 45.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2261 | 2566 | 2.203800 | TACTCGCTTTGCTCCGTATG | 57.796 | 50.000 | 0.00 | 0.00 | 0.00 | 2.39 |
2262 | 2567 | 0.246635 | ACTCGCTTTGCTCCGTATGT | 59.753 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2263 | 2568 | 1.475280 | ACTCGCTTTGCTCCGTATGTA | 59.525 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
2264 | 2569 | 2.120232 | CTCGCTTTGCTCCGTATGTAG | 58.880 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
2265 | 2570 | 1.475280 | TCGCTTTGCTCCGTATGTAGT | 59.525 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
2266 | 2571 | 1.852895 | CGCTTTGCTCCGTATGTAGTC | 59.147 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
2267 | 2572 | 2.734175 | CGCTTTGCTCCGTATGTAGTCA | 60.734 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2268 | 2573 | 2.603560 | GCTTTGCTCCGTATGTAGTCAC | 59.396 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2269 | 2574 | 3.676324 | GCTTTGCTCCGTATGTAGTCACT | 60.676 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
2270 | 2575 | 4.495422 | CTTTGCTCCGTATGTAGTCACTT | 58.505 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
2271 | 2576 | 3.503827 | TGCTCCGTATGTAGTCACTTG | 57.496 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2272 | 2577 | 2.823747 | TGCTCCGTATGTAGTCACTTGT | 59.176 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
2273 | 2578 | 3.257375 | TGCTCCGTATGTAGTCACTTGTT | 59.743 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
2274 | 2579 | 3.612860 | GCTCCGTATGTAGTCACTTGTTG | 59.387 | 47.826 | 0.00 | 0.00 | 0.00 | 3.33 |
2275 | 2580 | 4.174009 | CTCCGTATGTAGTCACTTGTTGG | 58.826 | 47.826 | 0.00 | 0.00 | 0.00 | 3.77 |
2276 | 2581 | 3.827876 | TCCGTATGTAGTCACTTGTTGGA | 59.172 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
2277 | 2582 | 4.281435 | TCCGTATGTAGTCACTTGTTGGAA | 59.719 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
2278 | 2583 | 5.046878 | TCCGTATGTAGTCACTTGTTGGAAT | 60.047 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2279 | 2584 | 5.291128 | CCGTATGTAGTCACTTGTTGGAATC | 59.709 | 44.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2280 | 2585 | 6.100004 | CGTATGTAGTCACTTGTTGGAATCT | 58.900 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
2281 | 2586 | 6.253727 | CGTATGTAGTCACTTGTTGGAATCTC | 59.746 | 42.308 | 0.00 | 0.00 | 0.00 | 2.75 |
2282 | 2587 | 5.808366 | TGTAGTCACTTGTTGGAATCTCT | 57.192 | 39.130 | 0.00 | 0.00 | 0.00 | 3.10 |
2283 | 2588 | 6.911250 | TGTAGTCACTTGTTGGAATCTCTA | 57.089 | 37.500 | 0.00 | 0.00 | 0.00 | 2.43 |
2284 | 2589 | 7.297936 | TGTAGTCACTTGTTGGAATCTCTAA | 57.702 | 36.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2285 | 2590 | 7.732025 | TGTAGTCACTTGTTGGAATCTCTAAA | 58.268 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
2286 | 2591 | 8.208224 | TGTAGTCACTTGTTGGAATCTCTAAAA | 58.792 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
2287 | 2592 | 9.052759 | GTAGTCACTTGTTGGAATCTCTAAAAA | 57.947 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
2328 | 2633 | 9.950680 | AAAGTAATAAATATCTGATTGCAACCG | 57.049 | 29.630 | 0.00 | 0.00 | 0.00 | 4.44 |
2329 | 2634 | 7.584987 | AGTAATAAATATCTGATTGCAACCGC | 58.415 | 34.615 | 0.00 | 0.00 | 39.24 | 5.68 |
2339 | 2644 | 4.319249 | GCAACCGCAAAACTCCAC | 57.681 | 55.556 | 0.00 | 0.00 | 38.36 | 4.02 |
2340 | 2645 | 1.435515 | GCAACCGCAAAACTCCACA | 59.564 | 52.632 | 0.00 | 0.00 | 38.36 | 4.17 |
2341 | 2646 | 0.179124 | GCAACCGCAAAACTCCACAA | 60.179 | 50.000 | 0.00 | 0.00 | 38.36 | 3.33 |
2342 | 2647 | 1.737363 | GCAACCGCAAAACTCCACAAA | 60.737 | 47.619 | 0.00 | 0.00 | 38.36 | 2.83 |
2343 | 2648 | 2.820330 | CAACCGCAAAACTCCACAAAT | 58.180 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
2344 | 2649 | 3.194062 | CAACCGCAAAACTCCACAAATT | 58.806 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
2345 | 2650 | 3.092334 | ACCGCAAAACTCCACAAATTC | 57.908 | 42.857 | 0.00 | 0.00 | 0.00 | 2.17 |
2346 | 2651 | 2.693074 | ACCGCAAAACTCCACAAATTCT | 59.307 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
2347 | 2652 | 3.052036 | CCGCAAAACTCCACAAATTCTG | 58.948 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
2348 | 2653 | 3.243367 | CCGCAAAACTCCACAAATTCTGA | 60.243 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
2349 | 2654 | 4.358851 | CGCAAAACTCCACAAATTCTGAA | 58.641 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
2350 | 2655 | 4.442073 | CGCAAAACTCCACAAATTCTGAAG | 59.558 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
2351 | 2656 | 4.746611 | GCAAAACTCCACAAATTCTGAAGG | 59.253 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
2352 | 2657 | 5.291971 | CAAAACTCCACAAATTCTGAAGGG | 58.708 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
2353 | 2658 | 3.884037 | ACTCCACAAATTCTGAAGGGT | 57.116 | 42.857 | 0.00 | 0.00 | 0.00 | 4.34 |
2354 | 2659 | 4.184649 | ACTCCACAAATTCTGAAGGGTT | 57.815 | 40.909 | 0.00 | 0.00 | 0.00 | 4.11 |
2355 | 2660 | 3.891366 | ACTCCACAAATTCTGAAGGGTTG | 59.109 | 43.478 | 0.00 | 3.40 | 0.00 | 3.77 |
2356 | 2661 | 3.891366 | CTCCACAAATTCTGAAGGGTTGT | 59.109 | 43.478 | 9.71 | 9.71 | 32.78 | 3.32 |
2357 | 2662 | 5.055265 | TCCACAAATTCTGAAGGGTTGTA | 57.945 | 39.130 | 13.31 | 1.81 | 31.44 | 2.41 |
2358 | 2663 | 5.070001 | TCCACAAATTCTGAAGGGTTGTAG | 58.930 | 41.667 | 13.31 | 8.88 | 31.44 | 2.74 |
2359 | 2664 | 4.827284 | CCACAAATTCTGAAGGGTTGTAGT | 59.173 | 41.667 | 13.31 | 0.00 | 31.44 | 2.73 |
2360 | 2665 | 5.278463 | CCACAAATTCTGAAGGGTTGTAGTG | 60.278 | 44.000 | 13.31 | 6.32 | 31.44 | 2.74 |
2361 | 2666 | 5.299279 | CACAAATTCTGAAGGGTTGTAGTGT | 59.701 | 40.000 | 13.31 | 0.00 | 31.44 | 3.55 |
2362 | 2667 | 5.891551 | ACAAATTCTGAAGGGTTGTAGTGTT | 59.108 | 36.000 | 12.49 | 0.00 | 30.88 | 3.32 |
2363 | 2668 | 6.183360 | ACAAATTCTGAAGGGTTGTAGTGTTG | 60.183 | 38.462 | 12.49 | 0.00 | 30.88 | 3.33 |
2364 | 2669 | 3.485463 | TCTGAAGGGTTGTAGTGTTGG | 57.515 | 47.619 | 0.00 | 0.00 | 0.00 | 3.77 |
2365 | 2670 | 2.775384 | TCTGAAGGGTTGTAGTGTTGGT | 59.225 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
2366 | 2671 | 3.201266 | TCTGAAGGGTTGTAGTGTTGGTT | 59.799 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
2367 | 2672 | 3.951680 | CTGAAGGGTTGTAGTGTTGGTTT | 59.048 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
2368 | 2673 | 4.345854 | TGAAGGGTTGTAGTGTTGGTTTT | 58.654 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
2369 | 2674 | 4.158764 | TGAAGGGTTGTAGTGTTGGTTTTG | 59.841 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
2370 | 2675 | 2.429250 | AGGGTTGTAGTGTTGGTTTTGC | 59.571 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
2371 | 2676 | 2.166664 | GGGTTGTAGTGTTGGTTTTGCA | 59.833 | 45.455 | 0.00 | 0.00 | 0.00 | 4.08 |
2372 | 2677 | 3.181470 | GGGTTGTAGTGTTGGTTTTGCAT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 3.96 |
2373 | 2678 | 4.048504 | GGTTGTAGTGTTGGTTTTGCATC | 58.951 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
2374 | 2679 | 4.440802 | GGTTGTAGTGTTGGTTTTGCATCA | 60.441 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
2375 | 2680 | 4.991153 | TGTAGTGTTGGTTTTGCATCAA | 57.009 | 36.364 | 0.00 | 0.00 | 0.00 | 2.57 |
2376 | 2681 | 5.528043 | TGTAGTGTTGGTTTTGCATCAAT | 57.472 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
2377 | 2682 | 5.911752 | TGTAGTGTTGGTTTTGCATCAATT | 58.088 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2378 | 2683 | 6.344500 | TGTAGTGTTGGTTTTGCATCAATTT | 58.656 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2379 | 2684 | 6.820656 | TGTAGTGTTGGTTTTGCATCAATTTT | 59.179 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
2380 | 2685 | 6.756299 | AGTGTTGGTTTTGCATCAATTTTT | 57.244 | 29.167 | 0.00 | 0.00 | 0.00 | 1.94 |
2401 | 2706 | 3.636282 | TTTTTGGCTTAAGAGTTCGCC | 57.364 | 42.857 | 6.67 | 0.00 | 42.78 | 5.54 |
2402 | 2707 | 1.530323 | TTTGGCTTAAGAGTTCGCCC | 58.470 | 50.000 | 6.67 | 0.00 | 41.80 | 6.13 |
2403 | 2708 | 0.322187 | TTGGCTTAAGAGTTCGCCCC | 60.322 | 55.000 | 6.67 | 0.00 | 41.80 | 5.80 |
2404 | 2709 | 1.298667 | GGCTTAAGAGTTCGCCCCA | 59.701 | 57.895 | 6.67 | 0.00 | 36.56 | 4.96 |
2405 | 2710 | 0.107165 | GGCTTAAGAGTTCGCCCCAT | 60.107 | 55.000 | 6.67 | 0.00 | 36.56 | 4.00 |
2406 | 2711 | 1.682087 | GGCTTAAGAGTTCGCCCCATT | 60.682 | 52.381 | 6.67 | 0.00 | 36.56 | 3.16 |
2407 | 2712 | 2.092323 | GCTTAAGAGTTCGCCCCATTT | 58.908 | 47.619 | 6.67 | 0.00 | 0.00 | 2.32 |
2408 | 2713 | 2.492088 | GCTTAAGAGTTCGCCCCATTTT | 59.508 | 45.455 | 6.67 | 0.00 | 0.00 | 1.82 |
2409 | 2714 | 3.673323 | GCTTAAGAGTTCGCCCCATTTTG | 60.673 | 47.826 | 6.67 | 0.00 | 0.00 | 2.44 |
2410 | 2715 | 2.286365 | AAGAGTTCGCCCCATTTTGA | 57.714 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2411 | 2716 | 2.286365 | AGAGTTCGCCCCATTTTGAA | 57.714 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2412 | 2717 | 2.593026 | AGAGTTCGCCCCATTTTGAAA | 58.407 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
2413 | 2718 | 2.962421 | AGAGTTCGCCCCATTTTGAAAA | 59.038 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
2414 | 2719 | 3.386402 | AGAGTTCGCCCCATTTTGAAAAA | 59.614 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
2415 | 2720 | 3.727726 | AGTTCGCCCCATTTTGAAAAAG | 58.272 | 40.909 | 0.00 | 0.00 | 0.00 | 2.27 |
2416 | 2721 | 3.133901 | AGTTCGCCCCATTTTGAAAAAGT | 59.866 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
2417 | 2722 | 3.828875 | TCGCCCCATTTTGAAAAAGTT | 57.171 | 38.095 | 0.00 | 0.00 | 0.00 | 2.66 |
2418 | 2723 | 3.723260 | TCGCCCCATTTTGAAAAAGTTC | 58.277 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
2419 | 2724 | 2.805671 | CGCCCCATTTTGAAAAAGTTCC | 59.194 | 45.455 | 0.00 | 0.00 | 32.28 | 3.62 |
2420 | 2725 | 2.805671 | GCCCCATTTTGAAAAAGTTCCG | 59.194 | 45.455 | 0.00 | 0.00 | 32.28 | 4.30 |
2421 | 2726 | 3.742954 | GCCCCATTTTGAAAAAGTTCCGT | 60.743 | 43.478 | 0.00 | 0.00 | 32.28 | 4.69 |
2422 | 2727 | 4.055360 | CCCCATTTTGAAAAAGTTCCGTC | 58.945 | 43.478 | 0.00 | 0.00 | 32.28 | 4.79 |
2423 | 2728 | 4.055360 | CCCATTTTGAAAAAGTTCCGTCC | 58.945 | 43.478 | 0.00 | 0.00 | 32.28 | 4.79 |
2424 | 2729 | 4.202212 | CCCATTTTGAAAAAGTTCCGTCCT | 60.202 | 41.667 | 0.00 | 0.00 | 32.28 | 3.85 |
2425 | 2730 | 5.356426 | CCATTTTGAAAAAGTTCCGTCCTT | 58.644 | 37.500 | 0.00 | 0.00 | 32.28 | 3.36 |
2426 | 2731 | 5.462068 | CCATTTTGAAAAAGTTCCGTCCTTC | 59.538 | 40.000 | 0.00 | 0.00 | 32.28 | 3.46 |
2427 | 2732 | 3.955771 | TTGAAAAAGTTCCGTCCTTCG | 57.044 | 42.857 | 0.00 | 0.00 | 39.52 | 3.79 |
2428 | 2733 | 2.908916 | TGAAAAAGTTCCGTCCTTCGT | 58.091 | 42.857 | 0.00 | 0.00 | 37.94 | 3.85 |
2429 | 2734 | 2.867975 | TGAAAAAGTTCCGTCCTTCGTC | 59.132 | 45.455 | 0.00 | 0.00 | 37.94 | 4.20 |
2430 | 2735 | 2.607631 | AAAAGTTCCGTCCTTCGTCA | 57.392 | 45.000 | 0.00 | 0.00 | 37.94 | 4.35 |
2431 | 2736 | 1.861971 | AAAGTTCCGTCCTTCGTCAC | 58.138 | 50.000 | 0.00 | 0.00 | 37.94 | 3.67 |
2432 | 2737 | 1.038280 | AAGTTCCGTCCTTCGTCACT | 58.962 | 50.000 | 0.00 | 0.00 | 37.94 | 3.41 |
2433 | 2738 | 0.314302 | AGTTCCGTCCTTCGTCACTG | 59.686 | 55.000 | 0.00 | 0.00 | 37.94 | 3.66 |
2434 | 2739 | 0.666577 | GTTCCGTCCTTCGTCACTGG | 60.667 | 60.000 | 0.00 | 0.00 | 37.94 | 4.00 |
2435 | 2740 | 2.430382 | TTCCGTCCTTCGTCACTGGC | 62.430 | 60.000 | 0.00 | 0.00 | 37.94 | 4.85 |
2436 | 2741 | 2.432628 | CGTCCTTCGTCACTGGCC | 60.433 | 66.667 | 0.00 | 0.00 | 34.52 | 5.36 |
2437 | 2742 | 2.741092 | GTCCTTCGTCACTGGCCA | 59.259 | 61.111 | 4.71 | 4.71 | 0.00 | 5.36 |
2438 | 2743 | 1.668151 | GTCCTTCGTCACTGGCCAC | 60.668 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
2439 | 2744 | 2.738521 | CCTTCGTCACTGGCCACG | 60.739 | 66.667 | 0.00 | 3.68 | 37.36 | 4.94 |
2440 | 2745 | 2.029073 | CTTCGTCACTGGCCACGT | 59.971 | 61.111 | 0.00 | 0.75 | 37.30 | 4.49 |
2441 | 2746 | 2.279851 | TTCGTCACTGGCCACGTG | 60.280 | 61.111 | 22.21 | 22.21 | 37.30 | 4.49 |
2442 | 2747 | 3.800685 | TTCGTCACTGGCCACGTGG | 62.801 | 63.158 | 30.66 | 30.66 | 37.30 | 4.94 |
2443 | 2748 | 4.293648 | CGTCACTGGCCACGTGGA | 62.294 | 66.667 | 38.30 | 17.53 | 37.39 | 4.02 |
2444 | 2749 | 2.110213 | GTCACTGGCCACGTGGAA | 59.890 | 61.111 | 38.30 | 23.07 | 37.39 | 3.53 |
2445 | 2750 | 1.961277 | GTCACTGGCCACGTGGAAG | 60.961 | 63.158 | 38.30 | 31.80 | 37.39 | 3.46 |
2446 | 2751 | 2.669569 | CACTGGCCACGTGGAAGG | 60.670 | 66.667 | 38.30 | 25.40 | 37.39 | 3.46 |
2451 | 2756 | 2.125106 | GCCACGTGGAAGGCCTAG | 60.125 | 66.667 | 38.30 | 8.59 | 45.18 | 3.02 |
2452 | 2757 | 2.656069 | GCCACGTGGAAGGCCTAGA | 61.656 | 63.158 | 38.30 | 0.00 | 45.18 | 2.43 |
2453 | 2758 | 1.517832 | CCACGTGGAAGGCCTAGAG | 59.482 | 63.158 | 31.31 | 0.00 | 37.39 | 2.43 |
2454 | 2759 | 1.153549 | CACGTGGAAGGCCTAGAGC | 60.154 | 63.158 | 5.16 | 0.00 | 42.60 | 4.09 |
2455 | 2760 | 1.305381 | ACGTGGAAGGCCTAGAGCT | 60.305 | 57.895 | 5.16 | 0.00 | 43.05 | 4.09 |
2456 | 2761 | 1.142748 | CGTGGAAGGCCTAGAGCTG | 59.857 | 63.158 | 5.16 | 0.00 | 43.05 | 4.24 |
2457 | 2762 | 1.323271 | CGTGGAAGGCCTAGAGCTGA | 61.323 | 60.000 | 5.16 | 0.00 | 43.05 | 4.26 |
2458 | 2763 | 0.176910 | GTGGAAGGCCTAGAGCTGAC | 59.823 | 60.000 | 5.16 | 0.00 | 43.05 | 3.51 |
2459 | 2764 | 1.323271 | TGGAAGGCCTAGAGCTGACG | 61.323 | 60.000 | 5.16 | 0.00 | 43.05 | 4.35 |
2460 | 2765 | 1.439644 | GAAGGCCTAGAGCTGACGG | 59.560 | 63.158 | 5.16 | 0.00 | 43.05 | 4.79 |
2461 | 2766 | 2.636778 | GAAGGCCTAGAGCTGACGGC | 62.637 | 65.000 | 5.16 | 0.00 | 43.05 | 5.68 |
2463 | 2768 | 3.151022 | GCCTAGAGCTGACGGCCT | 61.151 | 66.667 | 0.00 | 2.61 | 43.05 | 5.19 |
2464 | 2769 | 2.726351 | GCCTAGAGCTGACGGCCTT | 61.726 | 63.158 | 0.00 | 0.00 | 43.05 | 4.35 |
2465 | 2770 | 1.142748 | CCTAGAGCTGACGGCCTTG | 59.857 | 63.158 | 0.00 | 1.38 | 43.05 | 3.61 |
2466 | 2771 | 1.142748 | CTAGAGCTGACGGCCTTGG | 59.857 | 63.158 | 0.00 | 0.00 | 43.05 | 3.61 |
2467 | 2772 | 2.303549 | CTAGAGCTGACGGCCTTGGG | 62.304 | 65.000 | 0.00 | 0.00 | 43.05 | 4.12 |
2468 | 2773 | 4.785453 | GAGCTGACGGCCTTGGGG | 62.785 | 72.222 | 0.00 | 0.00 | 43.05 | 4.96 |
2494 | 2799 | 4.856801 | GACCGCGGACCATGGCAT | 62.857 | 66.667 | 35.90 | 5.18 | 0.00 | 4.40 |
2495 | 2800 | 4.424711 | ACCGCGGACCATGGCATT | 62.425 | 61.111 | 35.90 | 0.68 | 0.00 | 3.56 |
2496 | 2801 | 2.203139 | CCGCGGACCATGGCATTA | 60.203 | 61.111 | 24.07 | 0.00 | 0.00 | 1.90 |
2497 | 2802 | 2.253758 | CCGCGGACCATGGCATTAG | 61.254 | 63.158 | 24.07 | 0.47 | 0.00 | 1.73 |
2505 | 2810 | 1.922447 | ACCATGGCATTAGGACCTGAA | 59.078 | 47.619 | 13.04 | 0.00 | 0.00 | 3.02 |
2509 | 2814 | 1.213296 | GGCATTAGGACCTGAAGGGA | 58.787 | 55.000 | 3.53 | 0.00 | 40.27 | 4.20 |
2510 | 2815 | 1.134068 | GGCATTAGGACCTGAAGGGAC | 60.134 | 57.143 | 3.53 | 0.00 | 40.27 | 4.46 |
2511 | 2816 | 1.559682 | GCATTAGGACCTGAAGGGACA | 59.440 | 52.381 | 3.53 | 0.00 | 40.27 | 4.02 |
2520 | 2825 | 0.674581 | CTGAAGGGACAATGCAGCGA | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
2521 | 2826 | 0.955428 | TGAAGGGACAATGCAGCGAC | 60.955 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2523 | 2828 | 0.537143 | AAGGGACAATGCAGCGACAA | 60.537 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2525 | 2830 | 1.514678 | GGGACAATGCAGCGACAACA | 61.515 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2548 | 2855 | 1.526575 | GGGTCGGTGTAGACGTGGAA | 61.527 | 60.000 | 0.00 | 0.00 | 41.81 | 3.53 |
2554 | 2861 | 1.180029 | GTGTAGACGTGGAAGGCCTA | 58.820 | 55.000 | 5.16 | 0.00 | 34.31 | 3.93 |
2559 | 2866 | 1.305381 | ACGTGGAAGGCCTAGAGCT | 60.305 | 57.895 | 5.16 | 0.00 | 43.05 | 4.09 |
2617 | 2924 | 3.372025 | GCATTAGGACCTGAAGGGACAAT | 60.372 | 47.826 | 3.53 | 0.00 | 40.27 | 2.71 |
2664 | 2971 | 0.041238 | ACGTGGAGAGATCCTTGGGA | 59.959 | 55.000 | 0.00 | 0.00 | 35.55 | 4.37 |
2687 | 2995 | 1.134694 | GACGGCTGCGATCCAAAAC | 59.865 | 57.895 | 0.00 | 0.00 | 0.00 | 2.43 |
2690 | 2998 | 1.873165 | GGCTGCGATCCAAAACGAA | 59.127 | 52.632 | 0.00 | 0.00 | 0.00 | 3.85 |
2693 | 3001 | 1.201965 | GCTGCGATCCAAAACGAAGAG | 60.202 | 52.381 | 0.00 | 0.00 | 37.35 | 2.85 |
2695 | 3003 | 1.270625 | TGCGATCCAAAACGAAGAGGT | 60.271 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2725 | 3033 | 3.074412 | CCCGTTGCTTAATCAGTGAAGT | 58.926 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
2771 | 3079 | 3.255379 | GGAATCGTGGACGCTCGC | 61.255 | 66.667 | 0.00 | 0.00 | 39.60 | 5.03 |
2783 | 3091 | 0.179076 | ACGCTCGCATGATCAATCCA | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2845 | 3154 | 4.961511 | GCAGCCGGACGTGACACA | 62.962 | 66.667 | 5.05 | 0.00 | 0.00 | 3.72 |
2867 | 3176 | 2.412591 | AGCTAGGCCATCTGGTACATT | 58.587 | 47.619 | 5.01 | 0.00 | 38.20 | 2.71 |
2873 | 3182 | 1.949525 | GCCATCTGGTACATTCGCAAT | 59.050 | 47.619 | 0.00 | 0.00 | 38.20 | 3.56 |
2929 | 3238 | 1.747355 | GCACTTACATGCAATCAGGCT | 59.253 | 47.619 | 0.00 | 0.00 | 45.39 | 4.58 |
3078 | 3395 | 4.789075 | GCCAACGTAGGAGCGCGA | 62.789 | 66.667 | 12.10 | 0.00 | 34.88 | 5.87 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
92 | 93 | 1.126488 | TCAATGGCCACCTTGCAAAA | 58.874 | 45.000 | 8.16 | 0.00 | 0.00 | 2.44 |
118 | 119 | 5.219739 | ACTTGCTGAGATTCCCTCCTTATA | 58.780 | 41.667 | 0.00 | 0.00 | 41.25 | 0.98 |
119 | 120 | 4.043596 | ACTTGCTGAGATTCCCTCCTTAT | 58.956 | 43.478 | 0.00 | 0.00 | 41.25 | 1.73 |
131 | 132 | 2.057137 | AGCACCAAAACTTGCTGAGA | 57.943 | 45.000 | 0.00 | 0.00 | 36.15 | 3.27 |
144 | 145 | 7.926555 | GCTACTATTTCTTGAACTATAGCACCA | 59.073 | 37.037 | 0.00 | 0.00 | 34.13 | 4.17 |
294 | 304 | 2.100252 | GGACGAATACAAGATCACCGGA | 59.900 | 50.000 | 9.46 | 0.00 | 0.00 | 5.14 |
327 | 337 | 5.511234 | AGCTTTATTACTCCGTACGTCAT | 57.489 | 39.130 | 15.21 | 0.95 | 0.00 | 3.06 |
521 | 562 | 6.860023 | CAGAAAACATGAGCACCTAAGAAAAG | 59.140 | 38.462 | 0.00 | 0.00 | 0.00 | 2.27 |
539 | 582 | 8.424274 | AAACATTCAATTGAAGGACAGAAAAC | 57.576 | 30.769 | 32.81 | 0.00 | 37.99 | 2.43 |
626 | 731 | 8.537728 | TGTTATATTTCTTTACGGAGGGAGTA | 57.462 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
627 | 732 | 7.427989 | TGTTATATTTCTTTACGGAGGGAGT | 57.572 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
628 | 733 | 6.424207 | GCTGTTATATTTCTTTACGGAGGGAG | 59.576 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
629 | 734 | 6.285990 | GCTGTTATATTTCTTTACGGAGGGA | 58.714 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
630 | 735 | 5.176958 | CGCTGTTATATTTCTTTACGGAGGG | 59.823 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
631 | 736 | 5.751990 | ACGCTGTTATATTTCTTTACGGAGG | 59.248 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
632 | 737 | 6.823678 | ACGCTGTTATATTTCTTTACGGAG | 57.176 | 37.500 | 0.00 | 0.00 | 0.00 | 4.63 |
633 | 738 | 7.599630 | AAACGCTGTTATATTTCTTTACGGA | 57.400 | 32.000 | 0.00 | 0.00 | 0.00 | 4.69 |
680 | 785 | 9.379791 | CCCTCTGTAAAGAAATATAAGAACGTT | 57.620 | 33.333 | 0.00 | 0.00 | 0.00 | 3.99 |
681 | 786 | 8.755977 | TCCCTCTGTAAAGAAATATAAGAACGT | 58.244 | 33.333 | 0.00 | 0.00 | 0.00 | 3.99 |
682 | 787 | 9.250624 | CTCCCTCTGTAAAGAAATATAAGAACG | 57.749 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
915 | 1086 | 2.810274 | CCTGTGGTTGTGAATCAGTGAG | 59.190 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1007 | 1210 | 1.926511 | AATGTGCGCAACAGCTAGCC | 61.927 | 55.000 | 14.00 | 0.00 | 43.64 | 3.93 |
1032 | 1244 | 4.114794 | CCGATGCCAATGGAAATTTCTTC | 58.885 | 43.478 | 17.42 | 3.03 | 0.00 | 2.87 |
1033 | 1245 | 3.768757 | TCCGATGCCAATGGAAATTTCTT | 59.231 | 39.130 | 17.42 | 2.65 | 0.00 | 2.52 |
1034 | 1246 | 3.131046 | GTCCGATGCCAATGGAAATTTCT | 59.869 | 43.478 | 17.42 | 0.00 | 32.60 | 2.52 |
1473 | 1745 | 2.283966 | AGCACGTGGAGGTAGGCT | 60.284 | 61.111 | 18.88 | 1.79 | 0.00 | 4.58 |
1599 | 1892 | 2.747460 | CGGACCGGGTACGACTCA | 60.747 | 66.667 | 27.60 | 0.00 | 43.34 | 3.41 |
1664 | 1957 | 4.096003 | CCATCACGGGGCCGAAGT | 62.096 | 66.667 | 0.00 | 0.00 | 42.83 | 3.01 |
2002 | 2301 | 3.075186 | GGGCTTGTACCCGGAGTT | 58.925 | 61.111 | 0.73 | 0.00 | 40.98 | 3.01 |
2113 | 2418 | 2.232941 | ACCAAATGAAATCAGCTGCAGG | 59.767 | 45.455 | 17.12 | 0.00 | 0.00 | 4.85 |
2114 | 2419 | 3.192844 | AGACCAAATGAAATCAGCTGCAG | 59.807 | 43.478 | 10.11 | 10.11 | 0.00 | 4.41 |
2115 | 2420 | 3.057104 | CAGACCAAATGAAATCAGCTGCA | 60.057 | 43.478 | 9.47 | 0.77 | 0.00 | 4.41 |
2116 | 2421 | 3.192001 | TCAGACCAAATGAAATCAGCTGC | 59.808 | 43.478 | 9.47 | 0.00 | 0.00 | 5.25 |
2117 | 2422 | 4.698780 | TCTCAGACCAAATGAAATCAGCTG | 59.301 | 41.667 | 7.63 | 7.63 | 0.00 | 4.24 |
2118 | 2423 | 4.914983 | TCTCAGACCAAATGAAATCAGCT | 58.085 | 39.130 | 0.00 | 0.00 | 0.00 | 4.24 |
2119 | 2424 | 5.831702 | ATCTCAGACCAAATGAAATCAGC | 57.168 | 39.130 | 0.00 | 0.00 | 0.00 | 4.26 |
2120 | 2425 | 7.484007 | CGAAAATCTCAGACCAAATGAAATCAG | 59.516 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2121 | 2426 | 7.040478 | ACGAAAATCTCAGACCAAATGAAATCA | 60.040 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2122 | 2427 | 7.308435 | ACGAAAATCTCAGACCAAATGAAATC | 58.692 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
2123 | 2428 | 7.219484 | ACGAAAATCTCAGACCAAATGAAAT | 57.781 | 32.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2124 | 2429 | 6.633500 | ACGAAAATCTCAGACCAAATGAAA | 57.367 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2125 | 2430 | 7.921786 | ATACGAAAATCTCAGACCAAATGAA | 57.078 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2126 | 2431 | 7.921786 | AATACGAAAATCTCAGACCAAATGA | 57.078 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2127 | 2432 | 8.883731 | AGTAATACGAAAATCTCAGACCAAATG | 58.116 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2128 | 2433 | 9.099454 | GAGTAATACGAAAATCTCAGACCAAAT | 57.901 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2129 | 2434 | 7.548075 | GGAGTAATACGAAAATCTCAGACCAAA | 59.452 | 37.037 | 0.00 | 0.00 | 0.00 | 3.28 |
2130 | 2435 | 7.039882 | GGAGTAATACGAAAATCTCAGACCAA | 58.960 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
2131 | 2436 | 6.406624 | GGGAGTAATACGAAAATCTCAGACCA | 60.407 | 42.308 | 0.00 | 0.00 | 0.00 | 4.02 |
2132 | 2437 | 5.984323 | GGGAGTAATACGAAAATCTCAGACC | 59.016 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2133 | 2438 | 6.807789 | AGGGAGTAATACGAAAATCTCAGAC | 58.192 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2134 | 2439 | 7.419711 | AAGGGAGTAATACGAAAATCTCAGA | 57.580 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2135 | 2440 | 6.418226 | CGAAGGGAGTAATACGAAAATCTCAG | 59.582 | 42.308 | 0.00 | 0.00 | 0.00 | 3.35 |
2136 | 2441 | 6.127535 | ACGAAGGGAGTAATACGAAAATCTCA | 60.128 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
2137 | 2442 | 6.271566 | ACGAAGGGAGTAATACGAAAATCTC | 58.728 | 40.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2138 | 2443 | 6.218108 | ACGAAGGGAGTAATACGAAAATCT | 57.782 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
2139 | 2444 | 6.898912 | AACGAAGGGAGTAATACGAAAATC | 57.101 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
2140 | 2445 | 7.101700 | AGAAACGAAGGGAGTAATACGAAAAT | 58.898 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
2141 | 2446 | 6.458210 | AGAAACGAAGGGAGTAATACGAAAA | 58.542 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2142 | 2447 | 6.029346 | AGAAACGAAGGGAGTAATACGAAA | 57.971 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
2143 | 2448 | 5.649782 | AGAAACGAAGGGAGTAATACGAA | 57.350 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
2144 | 2449 | 6.757897 | TTAGAAACGAAGGGAGTAATACGA | 57.242 | 37.500 | 0.00 | 0.00 | 0.00 | 3.43 |
2145 | 2450 | 7.998753 | ATTTAGAAACGAAGGGAGTAATACG | 57.001 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2222 | 2527 | 9.690434 | GCGAGTAAATCAACACTCTAAAATAAG | 57.310 | 33.333 | 0.00 | 0.00 | 39.23 | 1.73 |
2223 | 2528 | 9.431887 | AGCGAGTAAATCAACACTCTAAAATAA | 57.568 | 29.630 | 0.00 | 0.00 | 39.23 | 1.40 |
2224 | 2529 | 8.997621 | AGCGAGTAAATCAACACTCTAAAATA | 57.002 | 30.769 | 0.00 | 0.00 | 39.23 | 1.40 |
2225 | 2530 | 7.907214 | AGCGAGTAAATCAACACTCTAAAAT | 57.093 | 32.000 | 0.00 | 0.00 | 39.23 | 1.82 |
2226 | 2531 | 7.724305 | AAGCGAGTAAATCAACACTCTAAAA | 57.276 | 32.000 | 0.00 | 0.00 | 39.23 | 1.52 |
2227 | 2532 | 7.572759 | CAAAGCGAGTAAATCAACACTCTAAA | 58.427 | 34.615 | 0.00 | 0.00 | 39.23 | 1.85 |
2228 | 2533 | 6.347402 | GCAAAGCGAGTAAATCAACACTCTAA | 60.347 | 38.462 | 0.00 | 0.00 | 39.23 | 2.10 |
2229 | 2534 | 5.120208 | GCAAAGCGAGTAAATCAACACTCTA | 59.880 | 40.000 | 0.00 | 0.00 | 39.23 | 2.43 |
2230 | 2535 | 4.083802 | GCAAAGCGAGTAAATCAACACTCT | 60.084 | 41.667 | 0.00 | 0.00 | 39.23 | 3.24 |
2231 | 2536 | 4.083802 | AGCAAAGCGAGTAAATCAACACTC | 60.084 | 41.667 | 0.00 | 0.00 | 38.24 | 3.51 |
2232 | 2537 | 3.815401 | AGCAAAGCGAGTAAATCAACACT | 59.185 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
2233 | 2538 | 4.147219 | AGCAAAGCGAGTAAATCAACAC | 57.853 | 40.909 | 0.00 | 0.00 | 0.00 | 3.32 |
2234 | 2539 | 3.188460 | GGAGCAAAGCGAGTAAATCAACA | 59.812 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
2235 | 2540 | 3.725010 | CGGAGCAAAGCGAGTAAATCAAC | 60.725 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
2236 | 2541 | 2.415168 | CGGAGCAAAGCGAGTAAATCAA | 59.585 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2237 | 2542 | 1.999735 | CGGAGCAAAGCGAGTAAATCA | 59.000 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
2238 | 2543 | 2.000447 | ACGGAGCAAAGCGAGTAAATC | 59.000 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
2239 | 2544 | 2.094762 | ACGGAGCAAAGCGAGTAAAT | 57.905 | 45.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2240 | 2545 | 2.728690 | TACGGAGCAAAGCGAGTAAA | 57.271 | 45.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2241 | 2546 | 2.094390 | ACATACGGAGCAAAGCGAGTAA | 60.094 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2242 | 2547 | 1.475280 | ACATACGGAGCAAAGCGAGTA | 59.525 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
2243 | 2548 | 0.246635 | ACATACGGAGCAAAGCGAGT | 59.753 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2244 | 2549 | 2.120232 | CTACATACGGAGCAAAGCGAG | 58.880 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
2245 | 2550 | 1.475280 | ACTACATACGGAGCAAAGCGA | 59.525 | 47.619 | 0.00 | 0.00 | 0.00 | 4.93 |
2246 | 2551 | 1.852895 | GACTACATACGGAGCAAAGCG | 59.147 | 52.381 | 0.00 | 0.00 | 0.00 | 4.68 |
2247 | 2552 | 2.603560 | GTGACTACATACGGAGCAAAGC | 59.396 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2248 | 2553 | 4.111375 | AGTGACTACATACGGAGCAAAG | 57.889 | 45.455 | 0.00 | 0.00 | 0.00 | 2.77 |
2249 | 2554 | 4.242475 | CAAGTGACTACATACGGAGCAAA | 58.758 | 43.478 | 0.00 | 0.00 | 0.00 | 3.68 |
2250 | 2555 | 3.257375 | ACAAGTGACTACATACGGAGCAA | 59.743 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
2251 | 2556 | 2.823747 | ACAAGTGACTACATACGGAGCA | 59.176 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
2252 | 2557 | 3.505464 | ACAAGTGACTACATACGGAGC | 57.495 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
2253 | 2558 | 4.082408 | TCCAACAAGTGACTACATACGGAG | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
2254 | 2559 | 3.827876 | TCCAACAAGTGACTACATACGGA | 59.172 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
2255 | 2560 | 4.182693 | TCCAACAAGTGACTACATACGG | 57.817 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2256 | 2561 | 6.100004 | AGATTCCAACAAGTGACTACATACG | 58.900 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2257 | 2562 | 7.324178 | AGAGATTCCAACAAGTGACTACATAC | 58.676 | 38.462 | 0.00 | 0.00 | 0.00 | 2.39 |
2258 | 2563 | 7.482169 | AGAGATTCCAACAAGTGACTACATA | 57.518 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2259 | 2564 | 6.365970 | AGAGATTCCAACAAGTGACTACAT | 57.634 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
2260 | 2565 | 5.808366 | AGAGATTCCAACAAGTGACTACA | 57.192 | 39.130 | 0.00 | 0.00 | 0.00 | 2.74 |
2261 | 2566 | 8.603242 | TTTTAGAGATTCCAACAAGTGACTAC | 57.397 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
2302 | 2607 | 9.950680 | CGGTTGCAATCAGATATTTATTACTTT | 57.049 | 29.630 | 10.93 | 0.00 | 0.00 | 2.66 |
2303 | 2608 | 8.076178 | GCGGTTGCAATCAGATATTTATTACTT | 58.924 | 33.333 | 10.93 | 0.00 | 42.15 | 2.24 |
2304 | 2609 | 7.584987 | GCGGTTGCAATCAGATATTTATTACT | 58.415 | 34.615 | 10.93 | 0.00 | 42.15 | 2.24 |
2305 | 2610 | 7.781763 | GCGGTTGCAATCAGATATTTATTAC | 57.218 | 36.000 | 10.93 | 0.00 | 42.15 | 1.89 |
2322 | 2627 | 0.179124 | TTGTGGAGTTTTGCGGTTGC | 60.179 | 50.000 | 0.00 | 0.00 | 43.20 | 4.17 |
2323 | 2628 | 2.285827 | TTTGTGGAGTTTTGCGGTTG | 57.714 | 45.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2324 | 2629 | 3.132111 | AGAATTTGTGGAGTTTTGCGGTT | 59.868 | 39.130 | 0.00 | 0.00 | 0.00 | 4.44 |
2325 | 2630 | 2.693074 | AGAATTTGTGGAGTTTTGCGGT | 59.307 | 40.909 | 0.00 | 0.00 | 0.00 | 5.68 |
2326 | 2631 | 3.052036 | CAGAATTTGTGGAGTTTTGCGG | 58.948 | 45.455 | 0.00 | 0.00 | 0.00 | 5.69 |
2327 | 2632 | 3.963665 | TCAGAATTTGTGGAGTTTTGCG | 58.036 | 40.909 | 0.00 | 0.00 | 0.00 | 4.85 |
2328 | 2633 | 4.746611 | CCTTCAGAATTTGTGGAGTTTTGC | 59.253 | 41.667 | 1.51 | 0.00 | 0.00 | 3.68 |
2329 | 2634 | 5.163416 | ACCCTTCAGAATTTGTGGAGTTTTG | 60.163 | 40.000 | 1.51 | 0.00 | 0.00 | 2.44 |
2330 | 2635 | 4.962362 | ACCCTTCAGAATTTGTGGAGTTTT | 59.038 | 37.500 | 1.51 | 0.00 | 0.00 | 2.43 |
2331 | 2636 | 4.546674 | ACCCTTCAGAATTTGTGGAGTTT | 58.453 | 39.130 | 1.51 | 0.00 | 0.00 | 2.66 |
2332 | 2637 | 4.184649 | ACCCTTCAGAATTTGTGGAGTT | 57.815 | 40.909 | 1.51 | 0.00 | 0.00 | 3.01 |
2333 | 2638 | 3.884037 | ACCCTTCAGAATTTGTGGAGT | 57.116 | 42.857 | 1.51 | 0.00 | 0.00 | 3.85 |
2334 | 2639 | 3.891366 | ACAACCCTTCAGAATTTGTGGAG | 59.109 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
2335 | 2640 | 3.909732 | ACAACCCTTCAGAATTTGTGGA | 58.090 | 40.909 | 4.78 | 0.00 | 0.00 | 4.02 |
2336 | 2641 | 4.827284 | ACTACAACCCTTCAGAATTTGTGG | 59.173 | 41.667 | 12.26 | 11.79 | 35.46 | 4.17 |
2337 | 2642 | 5.299279 | ACACTACAACCCTTCAGAATTTGTG | 59.701 | 40.000 | 12.26 | 0.00 | 32.73 | 3.33 |
2338 | 2643 | 5.445964 | ACACTACAACCCTTCAGAATTTGT | 58.554 | 37.500 | 9.00 | 9.00 | 34.79 | 2.83 |
2339 | 2644 | 6.208644 | CAACACTACAACCCTTCAGAATTTG | 58.791 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2340 | 2645 | 5.301805 | CCAACACTACAACCCTTCAGAATTT | 59.698 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2341 | 2646 | 4.827284 | CCAACACTACAACCCTTCAGAATT | 59.173 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
2342 | 2647 | 4.141251 | ACCAACACTACAACCCTTCAGAAT | 60.141 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
2343 | 2648 | 3.201266 | ACCAACACTACAACCCTTCAGAA | 59.799 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
2344 | 2649 | 2.775384 | ACCAACACTACAACCCTTCAGA | 59.225 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
2345 | 2650 | 3.208747 | ACCAACACTACAACCCTTCAG | 57.791 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
2346 | 2651 | 3.655615 | AACCAACACTACAACCCTTCA | 57.344 | 42.857 | 0.00 | 0.00 | 0.00 | 3.02 |
2347 | 2652 | 4.678622 | CAAAACCAACACTACAACCCTTC | 58.321 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
2348 | 2653 | 3.118920 | GCAAAACCAACACTACAACCCTT | 60.119 | 43.478 | 0.00 | 0.00 | 0.00 | 3.95 |
2349 | 2654 | 2.429250 | GCAAAACCAACACTACAACCCT | 59.571 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
2350 | 2655 | 2.166664 | TGCAAAACCAACACTACAACCC | 59.833 | 45.455 | 0.00 | 0.00 | 0.00 | 4.11 |
2351 | 2656 | 3.512033 | TGCAAAACCAACACTACAACC | 57.488 | 42.857 | 0.00 | 0.00 | 0.00 | 3.77 |
2352 | 2657 | 4.677584 | TGATGCAAAACCAACACTACAAC | 58.322 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
2353 | 2658 | 4.991153 | TGATGCAAAACCAACACTACAA | 57.009 | 36.364 | 0.00 | 0.00 | 0.00 | 2.41 |
2354 | 2659 | 4.991153 | TTGATGCAAAACCAACACTACA | 57.009 | 36.364 | 0.00 | 0.00 | 0.00 | 2.74 |
2355 | 2660 | 6.843069 | AAATTGATGCAAAACCAACACTAC | 57.157 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
2356 | 2661 | 7.856145 | AAAAATTGATGCAAAACCAACACTA | 57.144 | 28.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2357 | 2662 | 6.756299 | AAAAATTGATGCAAAACCAACACT | 57.244 | 29.167 | 0.00 | 0.00 | 0.00 | 3.55 |
2387 | 2692 | 1.751437 | AATGGGGCGAACTCTTAAGC | 58.249 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
2388 | 2693 | 3.756434 | TCAAAATGGGGCGAACTCTTAAG | 59.244 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
2389 | 2694 | 3.757270 | TCAAAATGGGGCGAACTCTTAA | 58.243 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
2390 | 2695 | 3.426787 | TCAAAATGGGGCGAACTCTTA | 57.573 | 42.857 | 0.00 | 0.00 | 0.00 | 2.10 |
2391 | 2696 | 2.286365 | TCAAAATGGGGCGAACTCTT | 57.714 | 45.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2392 | 2697 | 2.286365 | TTCAAAATGGGGCGAACTCT | 57.714 | 45.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2393 | 2698 | 3.378911 | TTTTCAAAATGGGGCGAACTC | 57.621 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
2394 | 2699 | 3.133901 | ACTTTTTCAAAATGGGGCGAACT | 59.866 | 39.130 | 1.21 | 0.00 | 0.00 | 3.01 |
2395 | 2700 | 3.462982 | ACTTTTTCAAAATGGGGCGAAC | 58.537 | 40.909 | 1.21 | 0.00 | 0.00 | 3.95 |
2396 | 2701 | 3.828875 | ACTTTTTCAAAATGGGGCGAA | 57.171 | 38.095 | 1.21 | 0.00 | 0.00 | 4.70 |
2397 | 2702 | 3.493524 | GGAACTTTTTCAAAATGGGGCGA | 60.494 | 43.478 | 1.21 | 0.00 | 32.80 | 5.54 |
2398 | 2703 | 2.805671 | GGAACTTTTTCAAAATGGGGCG | 59.194 | 45.455 | 1.21 | 0.00 | 32.80 | 6.13 |
2399 | 2704 | 2.805671 | CGGAACTTTTTCAAAATGGGGC | 59.194 | 45.455 | 1.21 | 0.00 | 32.80 | 5.80 |
2400 | 2705 | 4.055360 | GACGGAACTTTTTCAAAATGGGG | 58.945 | 43.478 | 1.21 | 0.00 | 32.80 | 4.96 |
2401 | 2706 | 4.055360 | GGACGGAACTTTTTCAAAATGGG | 58.945 | 43.478 | 1.21 | 0.00 | 32.80 | 4.00 |
2402 | 2707 | 4.944048 | AGGACGGAACTTTTTCAAAATGG | 58.056 | 39.130 | 1.21 | 0.00 | 32.80 | 3.16 |
2403 | 2708 | 5.173131 | CGAAGGACGGAACTTTTTCAAAATG | 59.827 | 40.000 | 0.00 | 0.00 | 38.46 | 2.32 |
2404 | 2709 | 5.278604 | CGAAGGACGGAACTTTTTCAAAAT | 58.721 | 37.500 | 0.00 | 0.00 | 38.46 | 1.82 |
2405 | 2710 | 4.664188 | CGAAGGACGGAACTTTTTCAAAA | 58.336 | 39.130 | 0.00 | 0.00 | 38.46 | 2.44 |
2406 | 2711 | 4.281525 | CGAAGGACGGAACTTTTTCAAA | 57.718 | 40.909 | 0.00 | 0.00 | 38.46 | 2.69 |
2407 | 2712 | 3.955771 | CGAAGGACGGAACTTTTTCAA | 57.044 | 42.857 | 0.00 | 0.00 | 38.46 | 2.69 |
2420 | 2725 | 1.668151 | GTGGCCAGTGACGAAGGAC | 60.668 | 63.158 | 5.11 | 0.00 | 0.00 | 3.85 |
2421 | 2726 | 2.741092 | GTGGCCAGTGACGAAGGA | 59.259 | 61.111 | 5.11 | 0.00 | 0.00 | 3.36 |
2422 | 2727 | 2.738521 | CGTGGCCAGTGACGAAGG | 60.739 | 66.667 | 5.11 | 0.00 | 37.81 | 3.46 |
2423 | 2728 | 2.029073 | ACGTGGCCAGTGACGAAG | 59.971 | 61.111 | 19.17 | 0.89 | 38.94 | 3.79 |
2424 | 2729 | 2.279851 | CACGTGGCCAGTGACGAA | 60.280 | 61.111 | 23.25 | 0.00 | 41.83 | 3.85 |
2425 | 2730 | 4.293648 | CCACGTGGCCAGTGACGA | 62.294 | 66.667 | 24.02 | 0.00 | 41.83 | 4.20 |
2426 | 2731 | 3.800685 | TTCCACGTGGCCAGTGACG | 62.801 | 63.158 | 30.25 | 20.56 | 41.83 | 4.35 |
2427 | 2732 | 1.961277 | CTTCCACGTGGCCAGTGAC | 60.961 | 63.158 | 30.25 | 8.67 | 41.83 | 3.67 |
2428 | 2733 | 2.425592 | CTTCCACGTGGCCAGTGA | 59.574 | 61.111 | 30.25 | 8.69 | 41.83 | 3.41 |
2429 | 2734 | 2.669569 | CCTTCCACGTGGCCAGTG | 60.670 | 66.667 | 30.25 | 21.62 | 39.19 | 3.66 |
2430 | 2735 | 4.643387 | GCCTTCCACGTGGCCAGT | 62.643 | 66.667 | 30.25 | 3.37 | 43.11 | 4.00 |
2435 | 2740 | 1.517832 | CTCTAGGCCTTCCACGTGG | 59.482 | 63.158 | 29.26 | 29.26 | 33.74 | 4.94 |
2436 | 2741 | 1.153549 | GCTCTAGGCCTTCCACGTG | 60.154 | 63.158 | 12.58 | 9.08 | 34.27 | 4.49 |
2437 | 2742 | 1.305381 | AGCTCTAGGCCTTCCACGT | 60.305 | 57.895 | 12.58 | 0.00 | 43.05 | 4.49 |
2438 | 2743 | 1.142748 | CAGCTCTAGGCCTTCCACG | 59.857 | 63.158 | 12.58 | 0.00 | 43.05 | 4.94 |
2439 | 2744 | 0.176910 | GTCAGCTCTAGGCCTTCCAC | 59.823 | 60.000 | 12.58 | 0.00 | 43.05 | 4.02 |
2440 | 2745 | 1.323271 | CGTCAGCTCTAGGCCTTCCA | 61.323 | 60.000 | 12.58 | 0.00 | 43.05 | 3.53 |
2441 | 2746 | 1.439644 | CGTCAGCTCTAGGCCTTCC | 59.560 | 63.158 | 12.58 | 0.00 | 43.05 | 3.46 |
2442 | 2747 | 1.439644 | CCGTCAGCTCTAGGCCTTC | 59.560 | 63.158 | 12.58 | 0.00 | 43.05 | 3.46 |
2443 | 2748 | 2.726351 | GCCGTCAGCTCTAGGCCTT | 61.726 | 63.158 | 12.58 | 0.00 | 43.54 | 4.35 |
2444 | 2749 | 3.151022 | GCCGTCAGCTCTAGGCCT | 61.151 | 66.667 | 11.78 | 11.78 | 43.54 | 5.19 |
2447 | 2752 | 1.142748 | CAAGGCCGTCAGCTCTAGG | 59.857 | 63.158 | 0.00 | 0.00 | 43.05 | 3.02 |
2448 | 2753 | 1.142748 | CCAAGGCCGTCAGCTCTAG | 59.857 | 63.158 | 0.00 | 0.00 | 43.05 | 2.43 |
2449 | 2754 | 2.359169 | CCCAAGGCCGTCAGCTCTA | 61.359 | 63.158 | 0.00 | 0.00 | 43.05 | 2.43 |
2450 | 2755 | 3.710722 | CCCAAGGCCGTCAGCTCT | 61.711 | 66.667 | 0.00 | 0.00 | 43.05 | 4.09 |
2451 | 2756 | 4.785453 | CCCCAAGGCCGTCAGCTC | 62.785 | 72.222 | 0.00 | 0.00 | 43.05 | 4.09 |
2477 | 2782 | 2.933878 | TAATGCCATGGTCCGCGGTC | 62.934 | 60.000 | 27.15 | 20.62 | 0.00 | 4.79 |
2478 | 2783 | 2.940890 | CTAATGCCATGGTCCGCGGT | 62.941 | 60.000 | 27.15 | 1.49 | 0.00 | 5.68 |
2479 | 2784 | 2.203139 | TAATGCCATGGTCCGCGG | 60.203 | 61.111 | 22.12 | 22.12 | 0.00 | 6.46 |
2480 | 2785 | 2.253758 | CCTAATGCCATGGTCCGCG | 61.254 | 63.158 | 14.67 | 0.00 | 0.00 | 6.46 |
2481 | 2786 | 1.148273 | TCCTAATGCCATGGTCCGC | 59.852 | 57.895 | 14.67 | 0.00 | 0.00 | 5.54 |
2482 | 2787 | 0.535102 | GGTCCTAATGCCATGGTCCG | 60.535 | 60.000 | 14.67 | 0.00 | 0.00 | 4.79 |
2483 | 2788 | 0.846693 | AGGTCCTAATGCCATGGTCC | 59.153 | 55.000 | 14.67 | 0.00 | 0.00 | 4.46 |
2484 | 2789 | 1.490490 | TCAGGTCCTAATGCCATGGTC | 59.510 | 52.381 | 14.67 | 6.41 | 0.00 | 4.02 |
2485 | 2790 | 1.595311 | TCAGGTCCTAATGCCATGGT | 58.405 | 50.000 | 14.67 | 0.00 | 0.00 | 3.55 |
2486 | 2791 | 2.579873 | CTTCAGGTCCTAATGCCATGG | 58.420 | 52.381 | 7.63 | 7.63 | 0.00 | 3.66 |
2487 | 2792 | 2.579873 | CCTTCAGGTCCTAATGCCATG | 58.420 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
2488 | 2793 | 1.496429 | CCCTTCAGGTCCTAATGCCAT | 59.504 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
2489 | 2794 | 0.918983 | CCCTTCAGGTCCTAATGCCA | 59.081 | 55.000 | 0.00 | 0.00 | 0.00 | 4.92 |
2490 | 2795 | 1.134068 | GTCCCTTCAGGTCCTAATGCC | 60.134 | 57.143 | 0.00 | 0.00 | 36.75 | 4.40 |
2491 | 2796 | 1.559682 | TGTCCCTTCAGGTCCTAATGC | 59.440 | 52.381 | 0.00 | 0.00 | 36.75 | 3.56 |
2492 | 2797 | 4.202441 | CATTGTCCCTTCAGGTCCTAATG | 58.798 | 47.826 | 0.00 | 0.00 | 36.75 | 1.90 |
2493 | 2798 | 3.372025 | GCATTGTCCCTTCAGGTCCTAAT | 60.372 | 47.826 | 0.00 | 0.00 | 36.75 | 1.73 |
2494 | 2799 | 2.026262 | GCATTGTCCCTTCAGGTCCTAA | 60.026 | 50.000 | 0.00 | 0.00 | 36.75 | 2.69 |
2495 | 2800 | 1.559682 | GCATTGTCCCTTCAGGTCCTA | 59.440 | 52.381 | 0.00 | 0.00 | 36.75 | 2.94 |
2496 | 2801 | 0.329596 | GCATTGTCCCTTCAGGTCCT | 59.670 | 55.000 | 0.00 | 0.00 | 36.75 | 3.85 |
2497 | 2802 | 0.038166 | TGCATTGTCCCTTCAGGTCC | 59.962 | 55.000 | 0.00 | 0.00 | 36.75 | 4.46 |
2505 | 2810 | 1.073025 | TTGTCGCTGCATTGTCCCT | 59.927 | 52.632 | 0.00 | 0.00 | 0.00 | 4.20 |
2509 | 2814 | 1.279539 | CGTGTTGTCGCTGCATTGT | 59.720 | 52.632 | 0.00 | 0.00 | 0.00 | 2.71 |
2510 | 2815 | 4.119936 | CGTGTTGTCGCTGCATTG | 57.880 | 55.556 | 0.00 | 0.00 | 0.00 | 2.82 |
2521 | 2826 | 3.844858 | TACACCGACCCGCGTGTTG | 62.845 | 63.158 | 4.92 | 3.02 | 40.00 | 3.33 |
2523 | 2828 | 4.047059 | CTACACCGACCCGCGTGT | 62.047 | 66.667 | 4.92 | 0.00 | 41.35 | 4.49 |
2525 | 2830 | 3.741476 | GTCTACACCGACCCGCGT | 61.741 | 66.667 | 4.92 | 0.00 | 38.67 | 6.01 |
2528 | 2833 | 2.177531 | CACGTCTACACCGACCCG | 59.822 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
2538 | 2843 | 2.022754 | GCTCTAGGCCTTCCACGTCTA | 61.023 | 57.143 | 12.58 | 0.00 | 34.27 | 2.59 |
2548 | 2855 | 3.151022 | GCCGTCAGCTCTAGGCCT | 61.151 | 66.667 | 11.78 | 11.78 | 43.54 | 5.19 |
2554 | 2861 | 3.710722 | CCCAAGGCCGTCAGCTCT | 61.711 | 66.667 | 0.00 | 0.00 | 43.05 | 4.09 |
2589 | 2896 | 0.907704 | TCAGGTCCTAATGCCACGGT | 60.908 | 55.000 | 0.00 | 0.00 | 0.00 | 4.83 |
2598 | 2905 | 2.026262 | GCATTGTCCCTTCAGGTCCTAA | 60.026 | 50.000 | 0.00 | 0.00 | 36.75 | 2.69 |
2617 | 2924 | 3.268603 | CCACGTGTTGTCGCTGCA | 61.269 | 61.111 | 15.65 | 0.00 | 0.00 | 4.41 |
2672 | 2979 | 0.179189 | CTTCGTTTTGGATCGCAGCC | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2683 | 2991 | 2.543777 | TGCAGCTACCTCTTCGTTTT | 57.456 | 45.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2687 | 2995 | 0.741221 | GGGTTGCAGCTACCTCTTCG | 60.741 | 60.000 | 23.17 | 0.00 | 35.92 | 3.79 |
2690 | 2998 | 1.481056 | AACGGGTTGCAGCTACCTCT | 61.481 | 55.000 | 23.17 | 7.86 | 35.92 | 3.69 |
2693 | 3001 | 3.263941 | CAACGGGTTGCAGCTACC | 58.736 | 61.111 | 17.03 | 17.03 | 33.45 | 3.18 |
2714 | 3022 | 4.256920 | GAGTATGTGCCACTTCACTGATT | 58.743 | 43.478 | 0.00 | 0.00 | 37.81 | 2.57 |
2718 | 3026 | 3.181455 | TGTTGAGTATGTGCCACTTCACT | 60.181 | 43.478 | 0.00 | 0.00 | 37.81 | 3.41 |
2725 | 3033 | 2.248280 | ACGTTGTTGAGTATGTGCCA | 57.752 | 45.000 | 0.00 | 0.00 | 0.00 | 4.92 |
2754 | 3062 | 3.255379 | GCGAGCGTCCACGATTCC | 61.255 | 66.667 | 2.58 | 0.00 | 43.02 | 3.01 |
2771 | 3079 | 4.024977 | TCACGCGTAATTGGATTGATCATG | 60.025 | 41.667 | 13.44 | 0.00 | 0.00 | 3.07 |
2783 | 3091 | 3.430895 | ACACTTCGATTTCACGCGTAATT | 59.569 | 39.130 | 13.44 | 3.58 | 0.00 | 1.40 |
2845 | 3154 | 3.260269 | TGTACCAGATGGCCTAGCTAT | 57.740 | 47.619 | 3.32 | 0.00 | 39.32 | 2.97 |
2867 | 3176 | 1.406341 | GGTTGCACCTAGGTATTGCGA | 60.406 | 52.381 | 15.80 | 11.45 | 39.22 | 5.10 |
2873 | 3182 | 2.320681 | AGTCTGGTTGCACCTAGGTA | 57.679 | 50.000 | 15.80 | 0.00 | 39.58 | 3.08 |
2913 | 3222 | 2.945008 | GTGCTAGCCTGATTGCATGTAA | 59.055 | 45.455 | 13.29 | 0.00 | 37.76 | 2.41 |
3052 | 3369 | 3.969250 | CTACGTTGGCCCGCACCAT | 62.969 | 63.158 | 0.00 | 0.00 | 40.13 | 3.55 |
3053 | 3370 | 4.690719 | CTACGTTGGCCCGCACCA | 62.691 | 66.667 | 0.00 | 0.00 | 38.16 | 4.17 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.