Multiple sequence alignment - TraesCS2A01G114400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G114400 chr2A 100.000 2815 0 0 1 2815 65401738 65404552 0.000000e+00 5199.0
1 TraesCS2A01G114400 chr2A 93.625 251 16 0 2565 2815 513290262 513290012 2.650000e-100 375.0
2 TraesCS2A01G114400 chr2A 90.909 99 7 2 290 387 65403909 65404006 6.330000e-27 132.0
3 TraesCS2A01G114400 chr2D 94.041 1074 35 14 804 1858 63709744 63710807 0.000000e+00 1602.0
4 TraesCS2A01G114400 chr2D 92.416 567 30 3 1 561 63709182 63709741 0.000000e+00 797.0
5 TraesCS2A01G114400 chr2D 95.633 229 9 1 559 786 293525059 293524831 1.590000e-97 366.0
6 TraesCS2A01G114400 chr2D 95.909 220 7 1 2346 2565 63712191 63712408 3.450000e-94 355.0
7 TraesCS2A01G114400 chr2D 93.137 204 13 1 1 204 263487683 263487885 5.900000e-77 298.0
8 TraesCS2A01G114400 chr2B 90.008 1261 55 31 773 1994 99959963 99961191 0.000000e+00 1565.0
9 TraesCS2A01G114400 chr2B 98.643 221 3 0 562 782 763962244 763962024 2.630000e-105 392.0
10 TraesCS2A01G114400 chr2B 83.849 291 31 13 2186 2472 99961216 99961494 2.150000e-66 263.0
11 TraesCS2A01G114400 chr2B 86.486 185 14 6 114 296 99954596 99954771 2.860000e-45 193.0
12 TraesCS2A01G114400 chr2B 88.148 135 16 0 314 448 99959688 99959822 8.070000e-36 161.0
13 TraesCS2A01G114400 chr2B 98.734 79 1 0 309 387 99961220 99961298 1.050000e-29 141.0
14 TraesCS2A01G114400 chr2B 88.710 62 5 2 114 173 99954270 99954331 1.080000e-09 75.0
15 TraesCS2A01G114400 chr2B 87.097 62 4 4 114 173 99954434 99954493 1.810000e-07 67.6
16 TraesCS2A01G114400 chr7B 98.206 223 4 0 560 782 529827789 529827567 9.450000e-105 390.0
17 TraesCS2A01G114400 chr1B 98.198 222 3 1 566 786 484209384 484209163 1.220000e-103 387.0
18 TraesCS2A01G114400 chr7A 95.082 244 12 0 2565 2808 174837591 174837348 4.400000e-103 385.0
19 TraesCS2A01G114400 chr7A 93.359 256 17 0 2560 2815 696536298 696536553 2.050000e-101 379.0
20 TraesCS2A01G114400 chr7A 93.281 253 17 0 2563 2815 59221637 59221889 9.520000e-100 374.0
21 TraesCS2A01G114400 chr3A 94.024 251 15 0 2565 2815 614349575 614349325 5.690000e-102 381.0
22 TraesCS2A01G114400 chr3A 97.696 217 5 0 566 782 568159029 568158813 9.520000e-100 374.0
23 TraesCS2A01G114400 chr3A 96.833 221 7 0 562 782 535225522 535225742 1.230000e-98 370.0
24 TraesCS2A01G114400 chr5B 97.309 223 5 1 559 781 405557247 405557468 7.360000e-101 377.0
25 TraesCS2A01G114400 chr5B 92.929 99 4 2 2171 2269 632129864 632129769 1.050000e-29 141.0
26 TraesCS2A01G114400 chr5B 91.000 100 7 2 288 387 632129866 632129769 1.760000e-27 134.0
27 TraesCS2A01G114400 chr7D 96.861 223 7 0 561 783 62255373 62255595 9.520000e-100 374.0
28 TraesCS2A01G114400 chr7D 95.833 96 2 1 2173 2268 44702545 44702638 1.350000e-33 154.0
29 TraesCS2A01G114400 chr7D 95.745 94 2 1 2176 2269 45271817 45271726 1.750000e-32 150.0
30 TraesCS2A01G114400 chr7D 93.878 98 3 2 2171 2268 44547985 44548079 8.130000e-31 145.0
31 TraesCS2A01G114400 chr6D 92.941 255 18 0 2561 2815 158564191 158564445 3.420000e-99 372.0
32 TraesCS2A01G114400 chr1D 92.549 255 17 2 2562 2815 410536397 410536144 5.730000e-97 364.0
33 TraesCS2A01G114400 chr1A 92.829 251 18 0 2565 2815 398664120 398664370 5.730000e-97 364.0
34 TraesCS2A01G114400 chr1A 94.068 236 13 1 566 801 28408891 28408657 9.590000e-95 357.0
35 TraesCS2A01G114400 chr5D 91.538 260 22 0 2556 2815 301291814 301292073 2.670000e-95 359.0
36 TraesCS2A01G114400 chr6A 89.157 249 20 2 1 249 256665220 256664979 1.270000e-78 303.0
37 TraesCS2A01G114400 chr4A 94.000 100 4 2 2171 2269 59277675 59277773 1.750000e-32 150.0
38 TraesCS2A01G114400 chr4A 93.684 95 2 4 304 395 656488686 656488779 3.780000e-29 139.0
39 TraesCS2A01G114400 chr3B 93.814 97 4 2 2173 2268 816690079 816690174 8.130000e-31 145.0
40 TraesCS2A01G114400 chr5A 97.531 81 2 0 312 392 130120770 130120850 3.780000e-29 139.0
41 TraesCS2A01G114400 chr5A 93.407 91 5 1 309 398 631646589 631646499 1.760000e-27 134.0
42 TraesCS2A01G114400 chr6B 91.919 99 4 3 2171 2269 216505918 216506012 4.890000e-28 135.0
43 TraesCS2A01G114400 chr3D 93.407 91 6 0 305 395 606932033 606931943 4.890000e-28 135.0
44 TraesCS2A01G114400 chr3D 92.000 100 3 3 2173 2268 607308338 607308436 4.890000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G114400 chr2A 65401738 65404552 2814 False 2665.5 5199 95.45450 1 2815 2 chr2A.!!$F1 2814
1 TraesCS2A01G114400 chr2D 63709182 63712408 3226 False 918.0 1602 94.12200 1 2565 3 chr2D.!!$F2 2564
2 TraesCS2A01G114400 chr2B 99959688 99961494 1806 False 532.5 1565 90.18475 309 2472 4 chr2B.!!$F2 2163

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
611 658 0.314898 CGCGTAGTTCTAGGTCGACG 60.315 60.0 9.92 12.97 36.21 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2060 2152 0.10104 CGTGGCTGGCAAATATGGTG 59.899 55.0 5.14 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 96 4.219944 AGACAAACATTCGCCACTACTCTA 59.780 41.667 0.00 0.00 0.00 2.43
103 104 2.174210 TCGCCACTACTCTAGGTACCAT 59.826 50.000 15.94 1.66 0.00 3.55
110 111 2.526432 ACTCTAGGTACCATATGGGCG 58.474 52.381 25.55 4.44 42.05 6.13
120 121 1.270839 CCATATGGGCGGTACTCTTGG 60.271 57.143 14.52 0.00 0.00 3.61
176 177 3.129287 GCCAGGACAAAACATATGACTGG 59.871 47.826 10.38 14.11 43.11 4.00
201 202 7.013083 GGATACATTGTCAGCAGATTTGATCTT 59.987 37.037 0.00 0.00 37.58 2.40
202 203 6.192234 ACATTGTCAGCAGATTTGATCTTC 57.808 37.500 0.00 0.00 37.58 2.87
203 204 5.708697 ACATTGTCAGCAGATTTGATCTTCA 59.291 36.000 0.00 0.00 37.58 3.02
204 205 6.377429 ACATTGTCAGCAGATTTGATCTTCAT 59.623 34.615 0.00 0.00 37.58 2.57
205 206 6.432607 TTGTCAGCAGATTTGATCTTCATC 57.567 37.500 0.00 0.00 37.58 2.92
206 207 5.742063 TGTCAGCAGATTTGATCTTCATCT 58.258 37.500 0.00 0.00 37.58 2.90
248 249 3.611025 TTCCAATTCCAAGGTCAGGTT 57.389 42.857 0.00 0.00 0.00 3.50
249 250 4.733077 TTCCAATTCCAAGGTCAGGTTA 57.267 40.909 0.00 0.00 0.00 2.85
250 251 4.301072 TCCAATTCCAAGGTCAGGTTAG 57.699 45.455 0.00 0.00 0.00 2.34
251 252 2.755103 CCAATTCCAAGGTCAGGTTAGC 59.245 50.000 0.00 0.00 0.00 3.09
252 253 3.420893 CAATTCCAAGGTCAGGTTAGCA 58.579 45.455 0.00 0.00 0.00 3.49
253 254 3.806949 ATTCCAAGGTCAGGTTAGCAA 57.193 42.857 0.00 0.00 0.00 3.91
335 336 0.461870 CGCATCCAGGGAATCGAACA 60.462 55.000 6.72 0.00 0.00 3.18
387 388 1.134818 CCACTACACCAGATGCGCTTA 60.135 52.381 9.73 0.00 0.00 3.09
393 394 1.806542 CACCAGATGCGCTTAGTTGTT 59.193 47.619 9.73 0.00 0.00 2.83
396 397 3.236816 CCAGATGCGCTTAGTTGTTTTG 58.763 45.455 9.73 0.00 0.00 2.44
413 414 4.822350 TGTTTTGTGACCATTGATTACGGA 59.178 37.500 0.00 0.00 0.00 4.69
452 453 5.476599 ACACTAAAATCCATTGCACAGCTAA 59.523 36.000 0.00 0.00 0.00 3.09
457 458 3.712016 TCCATTGCACAGCTAACCTAA 57.288 42.857 0.00 0.00 0.00 2.69
472 519 9.788960 CAGCTAACCTAAGTTTCAAATTTATCC 57.211 33.333 0.00 0.00 37.42 2.59
506 553 8.521176 TCTAATTAGTGGTCGGAGATATAAAGC 58.479 37.037 12.19 0.00 40.67 3.51
514 561 6.322969 TGGTCGGAGATATAAAGCTTTCACTA 59.677 38.462 16.57 6.74 40.67 2.74
572 619 8.845413 AGAACTAGTAGTATGTATTACCTCCG 57.155 38.462 2.50 0.00 0.00 4.63
573 620 8.435982 AGAACTAGTAGTATGTATTACCTCCGT 58.564 37.037 2.50 0.00 0.00 4.69
574 621 8.614469 AACTAGTAGTATGTATTACCTCCGTC 57.386 38.462 2.50 0.00 0.00 4.79
575 622 7.972301 ACTAGTAGTATGTATTACCTCCGTCT 58.028 38.462 0.00 0.00 0.00 4.18
576 623 8.093927 ACTAGTAGTATGTATTACCTCCGTCTC 58.906 40.741 0.00 0.00 0.00 3.36
577 624 5.931146 AGTAGTATGTATTACCTCCGTCTCG 59.069 44.000 0.00 0.00 0.00 4.04
589 636 2.933495 CCGTCTCGGTGAATAAGTCA 57.067 50.000 0.00 0.00 42.73 3.41
590 637 3.438297 CCGTCTCGGTGAATAAGTCAT 57.562 47.619 0.00 0.00 42.73 3.06
591 638 3.782046 CCGTCTCGGTGAATAAGTCATT 58.218 45.455 0.00 0.00 42.73 2.57
592 639 3.797256 CCGTCTCGGTGAATAAGTCATTC 59.203 47.826 0.00 0.00 42.73 2.67
593 640 3.482472 CGTCTCGGTGAATAAGTCATTCG 59.518 47.826 0.00 0.00 45.25 3.34
600 647 5.697848 GTGAATAAGTCATTCGCGTAGTT 57.302 39.130 5.77 2.59 45.25 2.24
601 648 5.715264 GTGAATAAGTCATTCGCGTAGTTC 58.285 41.667 5.77 0.29 45.25 3.01
602 649 5.515626 GTGAATAAGTCATTCGCGTAGTTCT 59.484 40.000 5.77 0.00 45.25 3.01
603 650 6.690098 GTGAATAAGTCATTCGCGTAGTTCTA 59.310 38.462 5.77 0.00 45.25 2.10
604 651 6.910972 TGAATAAGTCATTCGCGTAGTTCTAG 59.089 38.462 5.77 0.00 45.25 2.43
605 652 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
606 653 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
607 654 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
608 655 2.031314 TCATTCGCGTAGTTCTAGGTCG 59.969 50.000 5.77 5.99 0.00 4.79
609 656 1.725641 TTCGCGTAGTTCTAGGTCGA 58.274 50.000 5.77 11.56 0.00 4.20
610 657 1.002366 TCGCGTAGTTCTAGGTCGAC 58.998 55.000 7.13 7.13 0.00 4.20
611 658 0.314898 CGCGTAGTTCTAGGTCGACG 60.315 60.000 9.92 12.97 36.21 5.12
612 659 1.002366 GCGTAGTTCTAGGTCGACGA 58.998 55.000 9.92 0.00 35.42 4.20
613 660 1.596727 GCGTAGTTCTAGGTCGACGAT 59.403 52.381 9.92 3.12 35.42 3.73
614 661 2.031437 GCGTAGTTCTAGGTCGACGATT 59.969 50.000 9.92 0.07 35.42 3.34
615 662 3.486542 GCGTAGTTCTAGGTCGACGATTT 60.487 47.826 9.92 0.00 35.42 2.17
616 663 4.260375 GCGTAGTTCTAGGTCGACGATTTA 60.260 45.833 9.92 0.00 35.42 1.40
617 664 5.727791 GCGTAGTTCTAGGTCGACGATTTAA 60.728 44.000 9.92 0.00 35.42 1.52
618 665 5.674580 CGTAGTTCTAGGTCGACGATTTAAC 59.325 44.000 9.92 9.89 35.42 2.01
619 666 5.893897 AGTTCTAGGTCGACGATTTAACT 57.106 39.130 9.92 11.88 0.00 2.24
620 667 6.992063 AGTTCTAGGTCGACGATTTAACTA 57.008 37.500 9.92 2.53 0.00 2.24
621 668 7.565323 AGTTCTAGGTCGACGATTTAACTAT 57.435 36.000 9.92 0.00 0.00 2.12
622 669 7.638134 AGTTCTAGGTCGACGATTTAACTATC 58.362 38.462 9.92 0.00 0.00 2.08
623 670 7.498570 AGTTCTAGGTCGACGATTTAACTATCT 59.501 37.037 9.92 0.00 0.00 1.98
624 671 8.768955 GTTCTAGGTCGACGATTTAACTATCTA 58.231 37.037 9.92 0.00 0.00 1.98
625 672 8.893219 TCTAGGTCGACGATTTAACTATCTAA 57.107 34.615 9.92 0.00 0.00 2.10
626 673 9.330063 TCTAGGTCGACGATTTAACTATCTAAA 57.670 33.333 9.92 0.00 0.00 1.85
689 736 6.716934 ACATCCGTGTAGAAATCTAGTGAT 57.283 37.500 0.00 0.00 36.63 3.06
690 737 7.818997 ACATCCGTGTAGAAATCTAGTGATA 57.181 36.000 0.00 0.00 36.63 2.15
691 738 8.410673 ACATCCGTGTAGAAATCTAGTGATAT 57.589 34.615 0.00 0.00 36.63 1.63
692 739 9.516546 ACATCCGTGTAGAAATCTAGTGATATA 57.483 33.333 0.00 0.00 36.63 0.86
693 740 9.776158 CATCCGTGTAGAAATCTAGTGATATAC 57.224 37.037 0.00 0.00 31.70 1.47
694 741 9.742144 ATCCGTGTAGAAATCTAGTGATATACT 57.258 33.333 0.00 0.00 43.56 2.12
695 742 9.570468 TCCGTGTAGAAATCTAGTGATATACTT 57.430 33.333 0.00 0.00 40.89 2.24
739 786 6.757897 TTTAATTGCTCAAATCGATGACCT 57.242 33.333 0.00 0.00 0.00 3.85
740 787 7.857734 TTTAATTGCTCAAATCGATGACCTA 57.142 32.000 0.00 0.00 0.00 3.08
741 788 5.998454 AATTGCTCAAATCGATGACCTAG 57.002 39.130 0.00 0.00 0.00 3.02
742 789 4.736126 TTGCTCAAATCGATGACCTAGA 57.264 40.909 0.00 0.00 0.00 2.43
743 790 4.736126 TGCTCAAATCGATGACCTAGAA 57.264 40.909 0.00 0.00 0.00 2.10
744 791 4.433615 TGCTCAAATCGATGACCTAGAAC 58.566 43.478 0.00 0.00 0.00 3.01
745 792 4.160439 TGCTCAAATCGATGACCTAGAACT 59.840 41.667 0.00 0.00 0.00 3.01
746 793 5.359860 TGCTCAAATCGATGACCTAGAACTA 59.640 40.000 0.00 0.00 0.00 2.24
747 794 5.688176 GCTCAAATCGATGACCTAGAACTAC 59.312 44.000 0.00 0.00 0.00 2.73
748 795 5.817988 TCAAATCGATGACCTAGAACTACG 58.182 41.667 0.00 0.00 0.00 3.51
749 796 3.900388 ATCGATGACCTAGAACTACGC 57.100 47.619 0.00 0.00 0.00 4.42
750 797 1.596260 TCGATGACCTAGAACTACGCG 59.404 52.381 3.53 3.53 0.00 6.01
751 798 1.596260 CGATGACCTAGAACTACGCGA 59.404 52.381 15.93 0.00 0.00 5.87
752 799 2.031314 CGATGACCTAGAACTACGCGAA 59.969 50.000 15.93 0.00 0.00 4.70
753 800 3.303857 CGATGACCTAGAACTACGCGAAT 60.304 47.826 15.93 0.00 0.00 3.34
754 801 3.416119 TGACCTAGAACTACGCGAATG 57.584 47.619 15.93 4.47 0.00 2.67
755 802 3.011818 TGACCTAGAACTACGCGAATGA 58.988 45.455 15.93 0.00 0.00 2.57
756 803 3.181503 TGACCTAGAACTACGCGAATGAC 60.182 47.826 15.93 0.66 0.00 3.06
757 804 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
758 805 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
759 806 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
760 807 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
761 808 6.183360 ACCTAGAACTACGCGAATGACTTATT 60.183 38.462 15.93 0.00 0.00 1.40
762 809 6.360148 CCTAGAACTACGCGAATGACTTATTC 59.640 42.308 15.93 3.24 41.46 1.75
763 810 5.647589 AGAACTACGCGAATGACTTATTCA 58.352 37.500 15.93 0.00 44.42 2.57
764 811 5.515626 AGAACTACGCGAATGACTTATTCAC 59.484 40.000 15.93 0.00 44.42 3.18
765 812 4.110482 ACTACGCGAATGACTTATTCACC 58.890 43.478 15.93 0.00 44.42 4.02
766 813 3.247006 ACGCGAATGACTTATTCACCT 57.753 42.857 15.93 0.00 44.42 4.00
767 814 4.380841 ACGCGAATGACTTATTCACCTA 57.619 40.909 15.93 0.00 44.42 3.08
768 815 4.360563 ACGCGAATGACTTATTCACCTAG 58.639 43.478 15.93 0.00 44.42 3.02
769 816 4.097437 ACGCGAATGACTTATTCACCTAGA 59.903 41.667 15.93 0.00 44.42 2.43
770 817 4.441415 CGCGAATGACTTATTCACCTAGAC 59.559 45.833 0.00 0.00 44.42 2.59
771 818 4.441415 GCGAATGACTTATTCACCTAGACG 59.559 45.833 0.00 0.00 44.42 4.18
772 819 4.976731 CGAATGACTTATTCACCTAGACGG 59.023 45.833 0.00 0.00 44.42 4.79
773 820 5.220989 CGAATGACTTATTCACCTAGACGGA 60.221 44.000 0.00 0.00 44.42 4.69
774 821 5.776173 ATGACTTATTCACCTAGACGGAG 57.224 43.478 0.00 0.00 36.92 4.63
775 822 3.952323 TGACTTATTCACCTAGACGGAGG 59.048 47.826 0.00 0.00 42.89 4.30
802 849 5.567138 ACTGTACAAATAGCAAATGAGCC 57.433 39.130 0.00 0.00 34.23 4.70
834 881 7.390718 GTGAGAGCTCAAGGGTTAAAAATCTAA 59.609 37.037 17.77 0.00 41.85 2.10
835 882 7.942341 TGAGAGCTCAAGGGTTAAAAATCTAAA 59.058 33.333 17.77 0.00 36.53 1.85
836 883 8.885693 AGAGCTCAAGGGTTAAAAATCTAAAT 57.114 30.769 17.77 0.00 0.00 1.40
837 884 8.961634 AGAGCTCAAGGGTTAAAAATCTAAATC 58.038 33.333 17.77 0.00 0.00 2.17
839 886 9.975218 AGCTCAAGGGTTAAAAATCTAAATCTA 57.025 29.630 0.00 0.00 0.00 1.98
844 891 8.521170 AGGGTTAAAAATCTAAATCTAGTGGC 57.479 34.615 0.00 0.00 0.00 5.01
845 892 8.113462 AGGGTTAAAAATCTAAATCTAGTGGCA 58.887 33.333 0.00 0.00 0.00 4.92
854 913 1.944177 ATCTAGTGGCACAGTCAGGT 58.056 50.000 21.41 4.49 43.36 4.00
871 930 0.915364 GGTCAAGGCCAAGGAGATCT 59.085 55.000 5.01 0.00 0.00 2.75
884 943 0.388649 GAGATCTTGCCACGTGTCGT 60.389 55.000 15.65 0.00 42.36 4.34
1010 1069 2.503061 CCTCCACAGCATCCTCCG 59.497 66.667 0.00 0.00 0.00 4.63
1076 1143 2.106074 ACACACGCACACACACCAG 61.106 57.895 0.00 0.00 0.00 4.00
1093 1160 5.242393 CACACCAGATTCATCAAGAAAACCT 59.758 40.000 0.00 0.00 40.22 3.50
1354 1421 1.071699 TGTTTCCTTCCTTCCCTGTCG 59.928 52.381 0.00 0.00 0.00 4.35
1380 1451 2.411547 CGGTTCGTTGCTCATTTCTCAC 60.412 50.000 0.00 0.00 0.00 3.51
1385 1456 1.464997 GTTGCTCATTTCTCACCGGAC 59.535 52.381 9.46 0.00 0.00 4.79
1395 1478 3.762407 TCTCACCGGACTTTTTGATGA 57.238 42.857 9.46 0.00 0.00 2.92
1555 1638 4.141824 GCAGAAGGTAGCTCTCCTGTTTAT 60.142 45.833 10.56 0.00 35.27 1.40
1556 1639 5.596845 CAGAAGGTAGCTCTCCTGTTTATC 58.403 45.833 10.56 5.18 35.27 1.75
1561 1644 5.599242 AGGTAGCTCTCCTGTTTATCTAACC 59.401 44.000 9.24 0.00 35.81 2.85
1758 1845 3.969287 ATATGGCGAGTGCTGATGTAT 57.031 42.857 0.00 0.00 42.25 2.29
1786 1873 0.737219 ACCGCGTGTACCTAGATGTC 59.263 55.000 4.92 0.00 0.00 3.06
1806 1897 1.468908 CCAAACTGCGCAAGTGTTTCA 60.469 47.619 19.70 0.00 41.46 2.69
1835 1926 7.328982 TGTGAAGTTATCGTCGCTGTAATTTTA 59.671 33.333 2.71 0.00 34.60 1.52
1836 1927 8.325997 GTGAAGTTATCGTCGCTGTAATTTTAT 58.674 33.333 0.00 0.00 31.77 1.40
1837 1928 8.537223 TGAAGTTATCGTCGCTGTAATTTTATC 58.463 33.333 0.00 0.00 0.00 1.75
1858 1949 8.812513 TTATCATCATCAAGTGGAATTCTGTT 57.187 30.769 5.23 0.00 0.00 3.16
1859 1950 7.713734 ATCATCATCAAGTGGAATTCTGTTT 57.286 32.000 5.23 0.00 0.00 2.83
1861 1952 7.596494 TCATCATCAAGTGGAATTCTGTTTTC 58.404 34.615 5.23 0.00 0.00 2.29
1862 1953 6.957920 TCATCAAGTGGAATTCTGTTTTCA 57.042 33.333 5.23 0.00 0.00 2.69
1863 1954 6.738114 TCATCAAGTGGAATTCTGTTTTCAC 58.262 36.000 5.23 3.93 0.00 3.18
1864 1955 5.514274 TCAAGTGGAATTCTGTTTTCACC 57.486 39.130 5.23 0.00 0.00 4.02
1866 1957 5.067674 TCAAGTGGAATTCTGTTTTCACCTG 59.932 40.000 5.23 4.30 0.00 4.00
1867 1958 3.891366 AGTGGAATTCTGTTTTCACCTGG 59.109 43.478 5.23 0.00 0.00 4.45
1868 1959 3.888930 GTGGAATTCTGTTTTCACCTGGA 59.111 43.478 5.23 0.00 0.00 3.86
1869 1960 4.524328 GTGGAATTCTGTTTTCACCTGGAT 59.476 41.667 5.23 0.00 0.00 3.41
1870 1961 5.710099 GTGGAATTCTGTTTTCACCTGGATA 59.290 40.000 5.23 0.00 0.00 2.59
1871 1962 6.378280 GTGGAATTCTGTTTTCACCTGGATAT 59.622 38.462 5.23 0.00 0.00 1.63
1872 1963 6.377996 TGGAATTCTGTTTTCACCTGGATATG 59.622 38.462 5.23 0.00 0.00 1.78
1873 1964 6.183360 GGAATTCTGTTTTCACCTGGATATGG 60.183 42.308 5.23 0.00 0.00 2.74
1874 1965 5.512942 TTCTGTTTTCACCTGGATATGGA 57.487 39.130 0.00 0.00 0.00 3.41
1875 1966 5.715439 TCTGTTTTCACCTGGATATGGAT 57.285 39.130 0.00 0.00 0.00 3.41
1876 1967 6.823286 TCTGTTTTCACCTGGATATGGATA 57.177 37.500 0.00 0.00 0.00 2.59
1877 1968 7.392766 TCTGTTTTCACCTGGATATGGATAT 57.607 36.000 0.00 0.00 0.00 1.63
1878 1969 8.504811 TCTGTTTTCACCTGGATATGGATATA 57.495 34.615 0.00 0.00 0.00 0.86
1879 1970 9.116080 TCTGTTTTCACCTGGATATGGATATAT 57.884 33.333 0.00 0.00 32.19 0.86
1880 1971 9.170734 CTGTTTTCACCTGGATATGGATATATG 57.829 37.037 0.00 0.00 29.67 1.78
1881 1972 7.611467 TGTTTTCACCTGGATATGGATATATGC 59.389 37.037 0.00 0.00 37.91 3.14
1882 1973 6.889595 TTCACCTGGATATGGATATATGCA 57.110 37.500 9.55 9.55 42.89 3.96
1883 1974 7.455966 TTCACCTGGATATGGATATATGCAT 57.544 36.000 21.55 21.55 43.70 3.96
1884 1975 6.834107 TCACCTGGATATGGATATATGCATG 58.166 40.000 25.18 12.54 43.70 4.06
1885 1976 6.387807 TCACCTGGATATGGATATATGCATGT 59.612 38.462 25.18 20.22 43.70 3.21
1886 1977 7.058525 CACCTGGATATGGATATATGCATGTT 58.941 38.462 25.18 14.75 43.70 2.71
1887 1978 8.212995 CACCTGGATATGGATATATGCATGTTA 58.787 37.037 25.18 9.75 43.70 2.41
1888 1979 8.435187 ACCTGGATATGGATATATGCATGTTAG 58.565 37.037 25.18 19.47 43.70 2.34
1889 1980 7.389884 CCTGGATATGGATATATGCATGTTAGC 59.610 40.741 25.18 11.43 43.70 3.09
1913 2004 4.494484 TGTATCTTGTCACATCCAGAACG 58.506 43.478 0.00 0.00 0.00 3.95
1915 2006 0.439985 CTTGTCACATCCAGAACGCG 59.560 55.000 3.53 3.53 0.00 6.01
1944 2035 6.653273 TCATCAGTTAGAATCTTTCAAGCG 57.347 37.500 0.00 0.00 0.00 4.68
1985 2077 2.878406 AGATCAGTTGGGAAAACACACG 59.122 45.455 0.00 0.00 0.00 4.49
2016 2108 9.860898 AAAAAGTAAATGATACCAAGCTGATTC 57.139 29.630 0.00 0.00 0.00 2.52
2017 2109 8.814038 AAAGTAAATGATACCAAGCTGATTCT 57.186 30.769 0.00 0.00 0.00 2.40
2020 2112 9.331282 AGTAAATGATACCAAGCTGATTCTAAC 57.669 33.333 0.00 0.00 0.00 2.34
2021 2113 9.331282 GTAAATGATACCAAGCTGATTCTAACT 57.669 33.333 0.00 0.00 0.00 2.24
2022 2114 8.443953 AAATGATACCAAGCTGATTCTAACTC 57.556 34.615 0.00 0.00 0.00 3.01
2023 2115 6.798427 TGATACCAAGCTGATTCTAACTCT 57.202 37.500 0.00 0.00 0.00 3.24
2024 2116 7.898014 TGATACCAAGCTGATTCTAACTCTA 57.102 36.000 0.00 0.00 0.00 2.43
2025 2117 8.306313 TGATACCAAGCTGATTCTAACTCTAA 57.694 34.615 0.00 0.00 0.00 2.10
2026 2118 8.417106 TGATACCAAGCTGATTCTAACTCTAAG 58.583 37.037 0.00 0.00 0.00 2.18
2027 2119 5.423886 ACCAAGCTGATTCTAACTCTAAGC 58.576 41.667 0.00 0.00 0.00 3.09
2028 2120 5.046304 ACCAAGCTGATTCTAACTCTAAGCA 60.046 40.000 0.00 0.00 0.00 3.91
2030 2122 6.372659 CCAAGCTGATTCTAACTCTAAGCAAA 59.627 38.462 0.00 0.00 0.00 3.68
2031 2123 7.413877 CCAAGCTGATTCTAACTCTAAGCAAAG 60.414 40.741 0.00 0.00 0.00 2.77
2034 2126 7.495279 AGCTGATTCTAACTCTAAGCAAAGATG 59.505 37.037 0.00 0.00 0.00 2.90
2050 2142 3.587797 AGATGCAAACCAAGCTGATTG 57.412 42.857 0.00 0.00 38.74 2.67
2076 2176 1.044790 AGCCACCATATTTGCCAGCC 61.045 55.000 0.00 0.00 0.00 4.85
2082 2182 0.027979 CATATTTGCCAGCCACGTCG 59.972 55.000 0.00 0.00 0.00 5.12
2091 2206 0.525668 CAGCCACGTCGCCTAGTTAG 60.526 60.000 0.09 0.00 0.00 2.34
2095 2210 2.737679 GCCACGTCGCCTAGTTAGATTT 60.738 50.000 0.00 0.00 0.00 2.17
2122 2237 7.280205 CCAAGGTTAGGTTACAACACATAGATC 59.720 40.741 0.00 0.00 0.00 2.75
2123 2238 7.490657 AGGTTAGGTTACAACACATAGATCA 57.509 36.000 0.00 0.00 0.00 2.92
2124 2239 7.328737 AGGTTAGGTTACAACACATAGATCAC 58.671 38.462 0.00 0.00 0.00 3.06
2125 2240 7.038587 AGGTTAGGTTACAACACATAGATCACA 60.039 37.037 0.00 0.00 0.00 3.58
2126 2241 7.769044 GGTTAGGTTACAACACATAGATCACAT 59.231 37.037 0.00 0.00 0.00 3.21
2127 2242 9.811995 GTTAGGTTACAACACATAGATCACATA 57.188 33.333 0.00 0.00 0.00 2.29
2129 2244 8.306313 AGGTTACAACACATAGATCACATAGA 57.694 34.615 0.00 0.00 0.00 1.98
2130 2245 8.928448 AGGTTACAACACATAGATCACATAGAT 58.072 33.333 0.00 0.00 40.48 1.98
2169 2284 9.463443 TGATTATATATACGAATGAGCAATCGG 57.537 33.333 11.99 0.00 43.11 4.18
2174 2289 7.672983 ATATACGAATGAGCAATCGGAAAAT 57.327 32.000 11.99 0.48 43.11 1.82
2175 2290 8.771920 ATATACGAATGAGCAATCGGAAAATA 57.228 30.769 11.99 5.41 43.11 1.40
2176 2291 5.811399 ACGAATGAGCAATCGGAAAATAA 57.189 34.783 11.99 0.00 43.11 1.40
2177 2292 6.189677 ACGAATGAGCAATCGGAAAATAAA 57.810 33.333 11.99 0.00 43.11 1.40
2178 2293 6.616947 ACGAATGAGCAATCGGAAAATAAAA 58.383 32.000 11.99 0.00 43.11 1.52
2179 2294 7.087639 ACGAATGAGCAATCGGAAAATAAAAA 58.912 30.769 11.99 0.00 43.11 1.94
2180 2295 7.759433 ACGAATGAGCAATCGGAAAATAAAAAT 59.241 29.630 11.99 0.00 43.11 1.82
2181 2296 8.051909 CGAATGAGCAATCGGAAAATAAAAATG 58.948 33.333 0.20 0.00 35.49 2.32
2182 2297 7.775397 ATGAGCAATCGGAAAATAAAAATGG 57.225 32.000 0.00 0.00 0.00 3.16
2183 2298 6.105333 TGAGCAATCGGAAAATAAAAATGGG 58.895 36.000 0.00 0.00 0.00 4.00
2184 2299 6.071108 TGAGCAATCGGAAAATAAAAATGGGA 60.071 34.615 0.00 0.00 0.00 4.37
2185 2300 6.340522 AGCAATCGGAAAATAAAAATGGGAG 58.659 36.000 0.00 0.00 0.00 4.30
2188 2303 7.333174 GCAATCGGAAAATAAAAATGGGAGAAA 59.667 33.333 0.00 0.00 0.00 2.52
2273 2520 0.608130 ACACCAGATGCGCTTGTCTA 59.392 50.000 9.73 0.00 0.00 2.59
2274 2521 1.208052 ACACCAGATGCGCTTGTCTAT 59.792 47.619 9.73 0.00 0.00 1.98
2277 2524 2.133553 CCAGATGCGCTTGTCTATCAG 58.866 52.381 9.73 0.00 0.00 2.90
2291 2538 5.970592 TGTCTATCAGTGAACCTTGATGAG 58.029 41.667 0.00 0.00 35.72 2.90
2292 2539 5.481824 TGTCTATCAGTGAACCTTGATGAGT 59.518 40.000 0.00 0.00 35.72 3.41
2297 2544 6.030548 TCAGTGAACCTTGATGAGTCTAAG 57.969 41.667 0.00 0.00 0.00 2.18
2312 2559 7.812690 TGAGTCTAAGTGTAGTGTACAGAAA 57.187 36.000 0.00 0.00 39.77 2.52
2347 2594 4.217334 TCCGGTGTACAACTTGAACGTATA 59.783 41.667 9.68 0.00 0.00 1.47
2351 3397 6.746822 CGGTGTACAACTTGAACGTATATGTA 59.253 38.462 9.68 0.00 0.00 2.29
2352 3398 7.433131 CGGTGTACAACTTGAACGTATATGTAT 59.567 37.037 9.68 0.00 0.00 2.29
2353 3399 8.749499 GGTGTACAACTTGAACGTATATGTATC 58.251 37.037 2.87 0.01 0.00 2.24
2354 3400 8.749499 GTGTACAACTTGAACGTATATGTATCC 58.251 37.037 0.00 0.00 0.00 2.59
2355 3401 8.689061 TGTACAACTTGAACGTATATGTATCCT 58.311 33.333 0.00 0.00 0.00 3.24
2388 3434 9.567776 TTCAAATTTATCTTGACAGTCCACTAA 57.432 29.630 0.00 0.00 32.61 2.24
2516 3564 1.071605 GCGCAAGTCAAGTCAGTAGG 58.928 55.000 0.30 0.00 41.68 3.18
2555 3603 1.056660 TGAGTGGGAGGAGGTGTTTC 58.943 55.000 0.00 0.00 0.00 2.78
2561 3609 1.553706 GGAGGAGGTGTTTCGGTCTA 58.446 55.000 0.00 0.00 0.00 2.59
2565 3613 4.202131 GGAGGAGGTGTTTCGGTCTATAAG 60.202 50.000 0.00 0.00 0.00 1.73
2566 3614 3.705072 AGGAGGTGTTTCGGTCTATAAGG 59.295 47.826 0.00 0.00 0.00 2.69
2567 3615 3.455327 GAGGTGTTTCGGTCTATAAGGC 58.545 50.000 0.00 0.00 0.00 4.35
2568 3616 3.105283 AGGTGTTTCGGTCTATAAGGCT 58.895 45.455 0.00 0.00 0.00 4.58
2569 3617 3.118738 AGGTGTTTCGGTCTATAAGGCTG 60.119 47.826 0.00 0.00 0.00 4.85
2570 3618 3.195661 GTGTTTCGGTCTATAAGGCTGG 58.804 50.000 0.00 0.00 0.00 4.85
2571 3619 2.835764 TGTTTCGGTCTATAAGGCTGGT 59.164 45.455 0.00 0.00 0.00 4.00
2572 3620 3.118884 TGTTTCGGTCTATAAGGCTGGTC 60.119 47.826 0.00 0.00 0.00 4.02
2573 3621 2.447408 TCGGTCTATAAGGCTGGTCA 57.553 50.000 0.00 0.00 0.00 4.02
2574 3622 2.958818 TCGGTCTATAAGGCTGGTCAT 58.041 47.619 0.00 0.00 0.00 3.06
2575 3623 4.108501 TCGGTCTATAAGGCTGGTCATA 57.891 45.455 0.00 0.00 0.00 2.15
2576 3624 4.079970 TCGGTCTATAAGGCTGGTCATAG 58.920 47.826 0.00 0.00 0.00 2.23
2577 3625 3.827302 CGGTCTATAAGGCTGGTCATAGT 59.173 47.826 0.00 0.00 0.00 2.12
2578 3626 4.321304 CGGTCTATAAGGCTGGTCATAGTG 60.321 50.000 0.00 0.00 0.00 2.74
2579 3627 4.833380 GGTCTATAAGGCTGGTCATAGTGA 59.167 45.833 0.00 0.00 0.00 3.41
2580 3628 5.047660 GGTCTATAAGGCTGGTCATAGTGAG 60.048 48.000 0.00 0.00 0.00 3.51
2581 3629 5.047660 GTCTATAAGGCTGGTCATAGTGAGG 60.048 48.000 0.00 0.00 0.00 3.86
2582 3630 2.254152 AAGGCTGGTCATAGTGAGGA 57.746 50.000 0.00 0.00 0.00 3.71
2583 3631 1.786937 AGGCTGGTCATAGTGAGGAG 58.213 55.000 0.00 0.00 0.00 3.69
2584 3632 1.007721 AGGCTGGTCATAGTGAGGAGT 59.992 52.381 0.00 0.00 0.00 3.85
2585 3633 2.245028 AGGCTGGTCATAGTGAGGAGTA 59.755 50.000 0.00 0.00 0.00 2.59
2586 3634 3.031736 GGCTGGTCATAGTGAGGAGTAA 58.968 50.000 0.00 0.00 0.00 2.24
2587 3635 3.643792 GGCTGGTCATAGTGAGGAGTAAT 59.356 47.826 0.00 0.00 0.00 1.89
2588 3636 4.101741 GGCTGGTCATAGTGAGGAGTAATT 59.898 45.833 0.00 0.00 0.00 1.40
2589 3637 5.396884 GGCTGGTCATAGTGAGGAGTAATTT 60.397 44.000 0.00 0.00 0.00 1.82
2590 3638 6.183360 GGCTGGTCATAGTGAGGAGTAATTTA 60.183 42.308 0.00 0.00 0.00 1.40
2591 3639 7.445945 GCTGGTCATAGTGAGGAGTAATTTAT 58.554 38.462 0.00 0.00 0.00 1.40
2592 3640 8.585881 GCTGGTCATAGTGAGGAGTAATTTATA 58.414 37.037 0.00 0.00 0.00 0.98
2593 3641 9.915629 CTGGTCATAGTGAGGAGTAATTTATAC 57.084 37.037 0.00 0.00 0.00 1.47
2594 3642 9.656323 TGGTCATAGTGAGGAGTAATTTATACT 57.344 33.333 0.00 0.00 0.00 2.12
2601 3649 9.696572 AGTGAGGAGTAATTTATACTAGTGTCA 57.303 33.333 5.39 0.00 0.00 3.58
2605 3653 9.656323 AGGAGTAATTTATACTAGTGTCATCCA 57.344 33.333 5.39 0.00 0.00 3.41
2618 3666 4.310769 GTGTCATCCATATGTCACTAGCC 58.689 47.826 1.24 0.00 44.08 3.93
2619 3667 4.039730 GTGTCATCCATATGTCACTAGCCT 59.960 45.833 1.24 0.00 44.08 4.58
2620 3668 5.243954 GTGTCATCCATATGTCACTAGCCTA 59.756 44.000 1.24 0.00 44.08 3.93
2621 3669 5.838521 TGTCATCCATATGTCACTAGCCTAA 59.161 40.000 1.24 0.00 34.50 2.69
2622 3670 6.015095 TGTCATCCATATGTCACTAGCCTAAG 60.015 42.308 1.24 0.00 34.50 2.18
2623 3671 6.015010 GTCATCCATATGTCACTAGCCTAAGT 60.015 42.308 1.24 0.00 34.50 2.24
2624 3672 6.554982 TCATCCATATGTCACTAGCCTAAGTT 59.445 38.462 1.24 0.00 34.50 2.66
2625 3673 7.728532 TCATCCATATGTCACTAGCCTAAGTTA 59.271 37.037 1.24 0.00 34.50 2.24
2626 3674 7.286215 TCCATATGTCACTAGCCTAAGTTAC 57.714 40.000 1.24 0.00 0.00 2.50
2627 3675 7.067421 TCCATATGTCACTAGCCTAAGTTACT 58.933 38.462 1.24 0.00 0.00 2.24
2628 3676 8.222637 TCCATATGTCACTAGCCTAAGTTACTA 58.777 37.037 1.24 0.00 0.00 1.82
2629 3677 8.298140 CCATATGTCACTAGCCTAAGTTACTAC 58.702 40.741 1.24 0.00 0.00 2.73
2630 3678 6.712179 ATGTCACTAGCCTAAGTTACTACC 57.288 41.667 0.00 0.00 0.00 3.18
2631 3679 5.824421 TGTCACTAGCCTAAGTTACTACCT 58.176 41.667 0.00 0.00 0.00 3.08
2632 3680 5.884792 TGTCACTAGCCTAAGTTACTACCTC 59.115 44.000 0.00 0.00 0.00 3.85
2633 3681 5.299028 GTCACTAGCCTAAGTTACTACCTCC 59.701 48.000 0.00 0.00 0.00 4.30
2634 3682 5.044624 TCACTAGCCTAAGTTACTACCTCCA 60.045 44.000 0.00 0.00 0.00 3.86
2635 3683 5.834204 CACTAGCCTAAGTTACTACCTCCAT 59.166 44.000 0.00 0.00 0.00 3.41
2636 3684 7.002879 CACTAGCCTAAGTTACTACCTCCATA 58.997 42.308 0.00 0.00 0.00 2.74
2637 3685 7.175293 CACTAGCCTAAGTTACTACCTCCATAG 59.825 44.444 0.00 0.00 0.00 2.23
2638 3686 6.028258 AGCCTAAGTTACTACCTCCATAGT 57.972 41.667 0.00 0.00 38.89 2.12
2639 3687 5.834204 AGCCTAAGTTACTACCTCCATAGTG 59.166 44.000 0.00 0.00 36.09 2.74
2640 3688 5.509332 GCCTAAGTTACTACCTCCATAGTGC 60.509 48.000 0.00 0.00 36.09 4.40
2641 3689 5.597182 CCTAAGTTACTACCTCCATAGTGCA 59.403 44.000 0.00 0.00 36.09 4.57
2642 3690 6.097839 CCTAAGTTACTACCTCCATAGTGCAA 59.902 42.308 0.00 0.00 36.09 4.08
2643 3691 6.368779 AAGTTACTACCTCCATAGTGCAAA 57.631 37.500 0.00 0.00 36.09 3.68
2644 3692 5.978814 AGTTACTACCTCCATAGTGCAAAG 58.021 41.667 0.00 0.00 36.09 2.77
2645 3693 5.484290 AGTTACTACCTCCATAGTGCAAAGT 59.516 40.000 0.00 0.00 36.09 2.66
2646 3694 6.666546 AGTTACTACCTCCATAGTGCAAAGTA 59.333 38.462 0.00 0.00 36.09 2.24
2647 3695 7.344871 AGTTACTACCTCCATAGTGCAAAGTAT 59.655 37.037 0.00 0.00 36.09 2.12
2648 3696 6.163135 ACTACCTCCATAGTGCAAAGTATC 57.837 41.667 0.00 0.00 34.02 2.24
2649 3697 5.661312 ACTACCTCCATAGTGCAAAGTATCA 59.339 40.000 0.00 0.00 34.02 2.15
2650 3698 5.636903 ACCTCCATAGTGCAAAGTATCAT 57.363 39.130 0.00 0.00 0.00 2.45
2651 3699 6.747414 ACCTCCATAGTGCAAAGTATCATA 57.253 37.500 0.00 0.00 0.00 2.15
2652 3700 6.763355 ACCTCCATAGTGCAAAGTATCATAG 58.237 40.000 0.00 0.00 0.00 2.23
2653 3701 6.327626 ACCTCCATAGTGCAAAGTATCATAGT 59.672 38.462 0.00 0.00 0.00 2.12
2654 3702 7.509318 ACCTCCATAGTGCAAAGTATCATAGTA 59.491 37.037 0.00 0.00 0.00 1.82
2655 3703 8.031864 CCTCCATAGTGCAAAGTATCATAGTAG 58.968 40.741 0.00 0.00 0.00 2.57
2656 3704 8.478775 TCCATAGTGCAAAGTATCATAGTAGT 57.521 34.615 0.00 0.00 0.00 2.73
2657 3705 9.582648 TCCATAGTGCAAAGTATCATAGTAGTA 57.417 33.333 0.00 0.00 0.00 1.82
2658 3706 9.847706 CCATAGTGCAAAGTATCATAGTAGTAG 57.152 37.037 0.00 0.00 0.00 2.57
2661 3709 8.294954 AGTGCAAAGTATCATAGTAGTAGTGT 57.705 34.615 0.00 0.00 0.00 3.55
2662 3710 8.407064 AGTGCAAAGTATCATAGTAGTAGTGTC 58.593 37.037 0.00 0.00 0.00 3.67
2663 3711 8.188799 GTGCAAAGTATCATAGTAGTAGTGTCA 58.811 37.037 0.00 0.00 0.00 3.58
2664 3712 8.914011 TGCAAAGTATCATAGTAGTAGTGTCAT 58.086 33.333 0.00 0.00 0.00 3.06
2704 3752 8.986929 ATTAGCTTATAGACTCATTTTGCCTT 57.013 30.769 0.00 0.00 0.00 4.35
2705 3753 6.690194 AGCTTATAGACTCATTTTGCCTTG 57.310 37.500 0.00 0.00 0.00 3.61
2706 3754 5.591877 AGCTTATAGACTCATTTTGCCTTGG 59.408 40.000 0.00 0.00 0.00 3.61
2707 3755 5.221126 GCTTATAGACTCATTTTGCCTTGGG 60.221 44.000 0.00 0.00 0.00 4.12
2708 3756 2.978156 AGACTCATTTTGCCTTGGGA 57.022 45.000 0.00 0.00 0.00 4.37
2709 3757 3.243359 AGACTCATTTTGCCTTGGGAA 57.757 42.857 0.00 0.00 0.00 3.97
2710 3758 3.160269 AGACTCATTTTGCCTTGGGAAG 58.840 45.455 0.00 0.00 0.00 3.46
2711 3759 1.620323 ACTCATTTTGCCTTGGGAAGC 59.380 47.619 0.00 0.00 0.00 3.86
2712 3760 0.602562 TCATTTTGCCTTGGGAAGCG 59.397 50.000 0.00 0.00 0.00 4.68
2713 3761 1.015607 CATTTTGCCTTGGGAAGCGC 61.016 55.000 0.00 0.00 0.00 5.92
2714 3762 1.187567 ATTTTGCCTTGGGAAGCGCT 61.188 50.000 2.64 2.64 0.00 5.92
2715 3763 0.538516 TTTTGCCTTGGGAAGCGCTA 60.539 50.000 12.05 0.00 0.00 4.26
2716 3764 0.323360 TTTGCCTTGGGAAGCGCTAT 60.323 50.000 12.05 0.00 0.00 2.97
2717 3765 1.031571 TTGCCTTGGGAAGCGCTATG 61.032 55.000 12.05 0.00 0.00 2.23
2718 3766 1.452108 GCCTTGGGAAGCGCTATGT 60.452 57.895 12.05 0.00 0.00 2.29
2719 3767 1.032114 GCCTTGGGAAGCGCTATGTT 61.032 55.000 12.05 0.00 0.00 2.71
2720 3768 1.745827 GCCTTGGGAAGCGCTATGTTA 60.746 52.381 12.05 0.00 0.00 2.41
2721 3769 1.940613 CCTTGGGAAGCGCTATGTTAC 59.059 52.381 12.05 0.00 0.00 2.50
2722 3770 2.627945 CTTGGGAAGCGCTATGTTACA 58.372 47.619 12.05 1.24 0.00 2.41
2723 3771 2.309528 TGGGAAGCGCTATGTTACAG 57.690 50.000 12.05 0.00 0.00 2.74
2724 3772 1.553248 TGGGAAGCGCTATGTTACAGT 59.447 47.619 12.05 0.00 0.00 3.55
2725 3773 2.761767 TGGGAAGCGCTATGTTACAGTA 59.238 45.455 12.05 0.00 0.00 2.74
2726 3774 3.196039 TGGGAAGCGCTATGTTACAGTAA 59.804 43.478 12.05 0.00 0.00 2.24
2727 3775 3.554731 GGGAAGCGCTATGTTACAGTAAC 59.445 47.826 12.05 15.58 39.11 2.50
2751 3799 8.732746 ACATATTATGTTACTCCAAACACCTC 57.267 34.615 3.40 0.00 41.63 3.85
2752 3800 8.548877 ACATATTATGTTACTCCAAACACCTCT 58.451 33.333 3.40 0.00 41.63 3.69
2753 3801 9.046296 CATATTATGTTACTCCAAACACCTCTC 57.954 37.037 0.00 0.00 41.89 3.20
2754 3802 6.681729 TTATGTTACTCCAAACACCTCTCT 57.318 37.500 0.00 0.00 41.89 3.10
2755 3803 4.602340 TGTTACTCCAAACACCTCTCTC 57.398 45.455 0.00 0.00 34.50 3.20
2756 3804 3.323979 TGTTACTCCAAACACCTCTCTCC 59.676 47.826 0.00 0.00 34.50 3.71
2757 3805 2.407340 ACTCCAAACACCTCTCTCCT 57.593 50.000 0.00 0.00 0.00 3.69
2758 3806 2.252714 ACTCCAAACACCTCTCTCCTC 58.747 52.381 0.00 0.00 0.00 3.71
2759 3807 2.251818 CTCCAAACACCTCTCTCCTCA 58.748 52.381 0.00 0.00 0.00 3.86
2760 3808 2.836981 CTCCAAACACCTCTCTCCTCAT 59.163 50.000 0.00 0.00 0.00 2.90
2761 3809 3.251484 TCCAAACACCTCTCTCCTCATT 58.749 45.455 0.00 0.00 0.00 2.57
2762 3810 4.425772 TCCAAACACCTCTCTCCTCATTA 58.574 43.478 0.00 0.00 0.00 1.90
2763 3811 4.844085 TCCAAACACCTCTCTCCTCATTAA 59.156 41.667 0.00 0.00 0.00 1.40
2764 3812 5.309543 TCCAAACACCTCTCTCCTCATTAAA 59.690 40.000 0.00 0.00 0.00 1.52
2765 3813 6.012508 TCCAAACACCTCTCTCCTCATTAAAT 60.013 38.462 0.00 0.00 0.00 1.40
2766 3814 7.182026 TCCAAACACCTCTCTCCTCATTAAATA 59.818 37.037 0.00 0.00 0.00 1.40
2767 3815 7.281100 CCAAACACCTCTCTCCTCATTAAATAC 59.719 40.741 0.00 0.00 0.00 1.89
2768 3816 7.741554 AACACCTCTCTCCTCATTAAATACT 57.258 36.000 0.00 0.00 0.00 2.12
2769 3817 7.741554 ACACCTCTCTCCTCATTAAATACTT 57.258 36.000 0.00 0.00 0.00 2.24
2770 3818 7.560368 ACACCTCTCTCCTCATTAAATACTTG 58.440 38.462 0.00 0.00 0.00 3.16
2771 3819 6.481644 CACCTCTCTCCTCATTAAATACTTGC 59.518 42.308 0.00 0.00 0.00 4.01
2772 3820 5.994668 CCTCTCTCCTCATTAAATACTTGCC 59.005 44.000 0.00 0.00 0.00 4.52
2773 3821 6.408548 CCTCTCTCCTCATTAAATACTTGCCA 60.409 42.308 0.00 0.00 0.00 4.92
2774 3822 6.349300 TCTCTCCTCATTAAATACTTGCCAC 58.651 40.000 0.00 0.00 0.00 5.01
2775 3823 6.061022 TCTCCTCATTAAATACTTGCCACA 57.939 37.500 0.00 0.00 0.00 4.17
2776 3824 6.662755 TCTCCTCATTAAATACTTGCCACAT 58.337 36.000 0.00 0.00 0.00 3.21
2777 3825 7.801104 TCTCCTCATTAAATACTTGCCACATA 58.199 34.615 0.00 0.00 0.00 2.29
2778 3826 8.271458 TCTCCTCATTAAATACTTGCCACATAA 58.729 33.333 0.00 0.00 0.00 1.90
2779 3827 8.450578 TCCTCATTAAATACTTGCCACATAAG 57.549 34.615 0.00 0.00 0.00 1.73
2780 3828 7.013274 TCCTCATTAAATACTTGCCACATAAGC 59.987 37.037 0.00 0.00 0.00 3.09
2781 3829 7.201812 CCTCATTAAATACTTGCCACATAAGCA 60.202 37.037 0.00 0.00 38.81 3.91
2790 3838 4.870123 TGCCACATAAGCAAAATTGTCT 57.130 36.364 0.00 0.00 37.28 3.41
2791 3839 5.212532 TGCCACATAAGCAAAATTGTCTT 57.787 34.783 7.58 7.58 37.28 3.01
2792 3840 4.989797 TGCCACATAAGCAAAATTGTCTTG 59.010 37.500 10.85 0.00 37.28 3.02
2793 3841 4.389687 GCCACATAAGCAAAATTGTCTTGG 59.610 41.667 10.85 7.09 0.00 3.61
2794 3842 4.931002 CCACATAAGCAAAATTGTCTTGGG 59.069 41.667 10.85 7.02 0.00 4.12
2795 3843 4.931002 CACATAAGCAAAATTGTCTTGGGG 59.069 41.667 10.85 3.95 0.00 4.96
2796 3844 4.592778 ACATAAGCAAAATTGTCTTGGGGT 59.407 37.500 10.85 5.83 0.00 4.95
2797 3845 3.473923 AAGCAAAATTGTCTTGGGGTG 57.526 42.857 0.00 0.00 0.00 4.61
2798 3846 2.397597 AGCAAAATTGTCTTGGGGTGT 58.602 42.857 0.00 0.00 0.00 4.16
2799 3847 2.102925 AGCAAAATTGTCTTGGGGTGTG 59.897 45.455 0.00 0.00 0.00 3.82
2800 3848 2.158971 GCAAAATTGTCTTGGGGTGTGT 60.159 45.455 0.00 0.00 0.00 3.72
2801 3849 3.681313 GCAAAATTGTCTTGGGGTGTGTT 60.681 43.478 0.00 0.00 0.00 3.32
2802 3850 4.442192 GCAAAATTGTCTTGGGGTGTGTTA 60.442 41.667 0.00 0.00 0.00 2.41
2803 3851 5.665459 CAAAATTGTCTTGGGGTGTGTTAA 58.335 37.500 0.00 0.00 0.00 2.01
2804 3852 5.529581 AAATTGTCTTGGGGTGTGTTAAG 57.470 39.130 0.00 0.00 0.00 1.85
2805 3853 3.655615 TTGTCTTGGGGTGTGTTAAGT 57.344 42.857 0.00 0.00 0.00 2.24
2806 3854 3.655615 TGTCTTGGGGTGTGTTAAGTT 57.344 42.857 0.00 0.00 0.00 2.66
2807 3855 4.774660 TGTCTTGGGGTGTGTTAAGTTA 57.225 40.909 0.00 0.00 0.00 2.24
2808 3856 5.113446 TGTCTTGGGGTGTGTTAAGTTAA 57.887 39.130 0.00 0.00 0.00 2.01
2809 3857 4.883006 TGTCTTGGGGTGTGTTAAGTTAAC 59.117 41.667 17.26 17.26 39.11 2.01
2810 3858 4.883006 GTCTTGGGGTGTGTTAAGTTAACA 59.117 41.667 21.79 21.79 45.66 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 2.048444 TGGTACCTAGAGTAGTGGCG 57.952 55.000 14.36 0.00 0.00 5.69
95 96 3.875892 TACCGCCCATATGGTACCT 57.124 52.632 20.46 1.08 39.70 3.08
103 104 1.575419 AACCAAGAGTACCGCCCATA 58.425 50.000 0.00 0.00 0.00 2.74
110 111 7.094075 CCCCATAAAAAGTAAACCAAGAGTACC 60.094 40.741 0.00 0.00 0.00 3.34
120 121 6.394809 CCATGTCACCCCATAAAAAGTAAAC 58.605 40.000 0.00 0.00 0.00 2.01
176 177 7.493743 AGATCAAATCTGCTGACAATGTATC 57.506 36.000 0.00 2.33 38.44 2.24
185 186 6.412214 TGAAGATGAAGATCAAATCTGCTGA 58.588 36.000 10.16 0.00 40.13 4.26
248 249 9.520515 AAGAATGAAGTTAATCTCCTTTTGCTA 57.479 29.630 0.00 0.00 0.00 3.49
249 250 8.414629 AAGAATGAAGTTAATCTCCTTTTGCT 57.585 30.769 0.00 0.00 0.00 3.91
292 293 7.669098 CGCAATTTTTCTCCTCAACATATTTG 58.331 34.615 0.00 0.00 0.00 2.32
298 299 2.360483 TGCGCAATTTTTCTCCTCAACA 59.640 40.909 8.16 0.00 0.00 3.33
300 301 3.367292 GGATGCGCAATTTTTCTCCTCAA 60.367 43.478 17.11 0.00 0.00 3.02
387 388 6.205784 CGTAATCAATGGTCACAAAACAACT 58.794 36.000 0.00 0.00 0.00 3.16
393 394 7.873719 ATTATCCGTAATCAATGGTCACAAA 57.126 32.000 0.00 0.00 35.53 2.83
396 397 8.832521 TGTTTATTATCCGTAATCAATGGTCAC 58.167 33.333 0.00 0.00 35.53 3.67
430 431 5.105756 GGTTAGCTGTGCAATGGATTTTAGT 60.106 40.000 0.00 0.00 0.00 2.24
441 442 4.456535 TGAAACTTAGGTTAGCTGTGCAA 58.543 39.130 0.00 0.00 34.90 4.08
472 519 7.764443 TCTCCGACCACTAATTAGAATCTTTTG 59.236 37.037 19.38 4.91 0.00 2.44
506 553 5.611844 CGTTTCTAAAGGCGTGTAGTGAAAG 60.612 44.000 3.61 0.49 0.00 2.62
514 561 2.228138 TGACGTTTCTAAAGGCGTGT 57.772 45.000 0.00 0.00 37.71 4.49
568 615 6.238416 GAATGACTTATTCACCGAGACGGAG 61.238 48.000 16.99 9.14 45.73 4.63
569 616 4.439700 GAATGACTTATTCACCGAGACGGA 60.440 45.833 16.99 0.00 45.73 4.69
570 617 3.797256 GAATGACTTATTCACCGAGACGG 59.203 47.826 8.67 8.67 43.79 4.79
571 618 3.482472 CGAATGACTTATTCACCGAGACG 59.518 47.826 0.00 0.00 44.42 4.18
572 619 3.243177 GCGAATGACTTATTCACCGAGAC 59.757 47.826 0.00 0.00 44.42 3.36
573 620 3.444916 GCGAATGACTTATTCACCGAGA 58.555 45.455 0.00 0.00 44.42 4.04
574 621 2.216488 CGCGAATGACTTATTCACCGAG 59.784 50.000 0.00 0.00 44.42 4.63
575 622 2.190161 CGCGAATGACTTATTCACCGA 58.810 47.619 0.00 0.00 44.42 4.69
576 623 1.924524 ACGCGAATGACTTATTCACCG 59.075 47.619 15.93 0.00 44.42 4.94
577 624 4.110482 ACTACGCGAATGACTTATTCACC 58.890 43.478 15.93 0.00 44.42 4.02
578 625 5.515626 AGAACTACGCGAATGACTTATTCAC 59.484 40.000 15.93 0.00 44.42 3.18
579 626 5.647589 AGAACTACGCGAATGACTTATTCA 58.352 37.500 15.93 0.00 44.42 2.57
580 627 6.360148 CCTAGAACTACGCGAATGACTTATTC 59.640 42.308 15.93 3.24 41.46 1.75
581 628 6.183360 ACCTAGAACTACGCGAATGACTTATT 60.183 38.462 15.93 0.00 0.00 1.40
582 629 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
583 630 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
584 631 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
585 632 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
586 633 3.361414 GACCTAGAACTACGCGAATGAC 58.639 50.000 15.93 0.66 0.00 3.06
587 634 2.031314 CGACCTAGAACTACGCGAATGA 59.969 50.000 15.93 0.00 0.00 2.57
588 635 2.031314 TCGACCTAGAACTACGCGAATG 59.969 50.000 15.93 4.47 0.00 2.67
589 636 2.031437 GTCGACCTAGAACTACGCGAAT 59.969 50.000 15.93 0.00 0.00 3.34
590 637 1.394917 GTCGACCTAGAACTACGCGAA 59.605 52.381 15.93 0.00 0.00 4.70
591 638 1.002366 GTCGACCTAGAACTACGCGA 58.998 55.000 15.93 0.00 0.00 5.87
592 639 0.314898 CGTCGACCTAGAACTACGCG 60.315 60.000 10.58 3.53 0.00 6.01
593 640 1.002366 TCGTCGACCTAGAACTACGC 58.998 55.000 10.58 0.00 0.00 4.42
594 641 3.940657 AATCGTCGACCTAGAACTACG 57.059 47.619 10.58 0.00 0.00 3.51
595 642 6.780127 AGTTAAATCGTCGACCTAGAACTAC 58.220 40.000 10.58 0.00 0.00 2.73
596 643 6.992063 AGTTAAATCGTCGACCTAGAACTA 57.008 37.500 10.58 0.00 0.00 2.24
597 644 5.893897 AGTTAAATCGTCGACCTAGAACT 57.106 39.130 10.58 10.32 0.00 3.01
598 645 7.638134 AGATAGTTAAATCGTCGACCTAGAAC 58.362 38.462 10.58 8.24 0.00 3.01
599 646 7.798596 AGATAGTTAAATCGTCGACCTAGAA 57.201 36.000 10.58 0.00 0.00 2.10
600 647 8.893219 TTAGATAGTTAAATCGTCGACCTAGA 57.107 34.615 10.58 1.59 0.00 2.43
664 711 9.000486 TATCACTAGATTTCTACACGGATGTAG 58.000 37.037 7.95 7.95 45.22 2.74
665 712 7.818997 ATCACTAGATTTCTACACGGATGTA 57.181 36.000 0.00 0.00 40.48 2.29
666 713 6.716934 ATCACTAGATTTCTACACGGATGT 57.283 37.500 0.00 0.00 43.30 3.06
667 714 9.776158 GTATATCACTAGATTTCTACACGGATG 57.224 37.037 0.00 0.00 35.67 3.51
668 715 9.742144 AGTATATCACTAGATTTCTACACGGAT 57.258 33.333 0.00 0.00 34.98 4.18
669 716 9.570468 AAGTATATCACTAGATTTCTACACGGA 57.430 33.333 0.00 0.00 36.04 4.69
713 760 9.071276 AGGTCATCGATTTGAGCAATTAAATAT 57.929 29.630 17.73 0.00 44.58 1.28
714 761 8.450578 AGGTCATCGATTTGAGCAATTAAATA 57.549 30.769 17.73 0.00 44.58 1.40
715 762 7.338800 AGGTCATCGATTTGAGCAATTAAAT 57.661 32.000 17.73 0.00 44.58 1.40
716 763 6.757897 AGGTCATCGATTTGAGCAATTAAA 57.242 33.333 17.73 0.00 44.58 1.52
717 764 7.272244 TCTAGGTCATCGATTTGAGCAATTAA 58.728 34.615 17.73 0.00 44.58 1.40
718 765 6.816136 TCTAGGTCATCGATTTGAGCAATTA 58.184 36.000 17.73 4.05 44.58 1.40
719 766 5.674525 TCTAGGTCATCGATTTGAGCAATT 58.325 37.500 17.73 3.20 44.58 2.32
720 767 5.282055 TCTAGGTCATCGATTTGAGCAAT 57.718 39.130 17.73 3.80 44.58 3.56
721 768 4.736126 TCTAGGTCATCGATTTGAGCAA 57.264 40.909 17.73 3.36 44.58 3.91
722 769 4.160439 AGTTCTAGGTCATCGATTTGAGCA 59.840 41.667 17.73 5.86 44.58 4.26
723 770 4.688021 AGTTCTAGGTCATCGATTTGAGC 58.312 43.478 9.64 9.64 42.94 4.26
724 771 5.910166 CGTAGTTCTAGGTCATCGATTTGAG 59.090 44.000 0.00 0.00 0.00 3.02
725 772 5.732528 GCGTAGTTCTAGGTCATCGATTTGA 60.733 44.000 0.00 0.00 0.00 2.69
726 773 4.441415 GCGTAGTTCTAGGTCATCGATTTG 59.559 45.833 0.00 0.00 0.00 2.32
727 774 4.608951 GCGTAGTTCTAGGTCATCGATTT 58.391 43.478 0.00 0.00 0.00 2.17
728 775 3.303857 CGCGTAGTTCTAGGTCATCGATT 60.304 47.826 0.00 0.00 0.00 3.34
729 776 2.223611 CGCGTAGTTCTAGGTCATCGAT 59.776 50.000 0.00 0.00 0.00 3.59
730 777 1.596260 CGCGTAGTTCTAGGTCATCGA 59.404 52.381 0.00 0.00 0.00 3.59
731 778 1.596260 TCGCGTAGTTCTAGGTCATCG 59.404 52.381 5.77 0.00 0.00 3.84
732 779 3.687572 TTCGCGTAGTTCTAGGTCATC 57.312 47.619 5.77 0.00 0.00 2.92
733 780 3.630769 TCATTCGCGTAGTTCTAGGTCAT 59.369 43.478 5.77 0.00 0.00 3.06
734 781 3.011818 TCATTCGCGTAGTTCTAGGTCA 58.988 45.455 5.77 0.00 0.00 4.02
735 782 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
736 783 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
737 784 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
738 785 6.910972 TGAATAAGTCATTCGCGTAGTTCTAG 59.089 38.462 5.77 0.00 45.25 2.43
739 786 6.690098 GTGAATAAGTCATTCGCGTAGTTCTA 59.310 38.462 5.77 0.00 45.25 2.10
740 787 5.515626 GTGAATAAGTCATTCGCGTAGTTCT 59.484 40.000 5.77 0.00 45.25 3.01
741 788 5.715264 GTGAATAAGTCATTCGCGTAGTTC 58.285 41.667 5.77 0.29 45.25 3.01
742 789 5.697848 GTGAATAAGTCATTCGCGTAGTT 57.302 39.130 5.77 2.59 45.25 2.24
749 796 4.976731 CCGTCTAGGTGAATAAGTCATTCG 59.023 45.833 0.00 0.00 45.25 3.34
750 797 6.145338 TCCGTCTAGGTGAATAAGTCATTC 57.855 41.667 0.00 0.00 40.27 2.67
751 798 5.069251 CCTCCGTCTAGGTGAATAAGTCATT 59.931 44.000 0.00 0.00 38.90 2.57
752 799 4.585162 CCTCCGTCTAGGTGAATAAGTCAT 59.415 45.833 0.00 0.00 38.90 3.06
753 800 3.952323 CCTCCGTCTAGGTGAATAAGTCA 59.048 47.826 0.00 0.00 41.99 3.41
754 801 4.571372 CCTCCGTCTAGGTGAATAAGTC 57.429 50.000 0.00 0.00 41.99 3.01
764 811 3.557228 ACAGTACTACCTCCGTCTAGG 57.443 52.381 0.00 0.00 42.82 3.02
765 812 5.016051 TGTACAGTACTACCTCCGTCTAG 57.984 47.826 12.07 0.00 0.00 2.43
766 813 5.420725 TTGTACAGTACTACCTCCGTCTA 57.579 43.478 12.07 0.00 0.00 2.59
767 814 3.988976 TGTACAGTACTACCTCCGTCT 57.011 47.619 12.07 0.00 0.00 4.18
768 815 5.573337 ATTTGTACAGTACTACCTCCGTC 57.427 43.478 12.07 0.00 0.00 4.79
769 816 5.067023 GCTATTTGTACAGTACTACCTCCGT 59.933 44.000 12.07 0.00 0.00 4.69
770 817 5.066893 TGCTATTTGTACAGTACTACCTCCG 59.933 44.000 12.07 0.00 0.00 4.63
771 818 6.461110 TGCTATTTGTACAGTACTACCTCC 57.539 41.667 12.07 0.00 0.00 4.30
772 819 8.818057 CATTTGCTATTTGTACAGTACTACCTC 58.182 37.037 12.07 0.00 0.00 3.85
773 820 8.537016 TCATTTGCTATTTGTACAGTACTACCT 58.463 33.333 12.07 0.00 0.00 3.08
774 821 8.712285 TCATTTGCTATTTGTACAGTACTACC 57.288 34.615 12.07 0.00 0.00 3.18
775 822 8.328864 GCTCATTTGCTATTTGTACAGTACTAC 58.671 37.037 12.07 0.00 0.00 2.73
776 823 7.494625 GGCTCATTTGCTATTTGTACAGTACTA 59.505 37.037 12.07 1.31 0.00 1.82
777 824 6.316390 GGCTCATTTGCTATTTGTACAGTACT 59.684 38.462 12.07 0.00 0.00 2.73
778 825 6.487103 GGCTCATTTGCTATTTGTACAGTAC 58.513 40.000 3.49 3.49 0.00 2.73
779 826 5.293324 CGGCTCATTTGCTATTTGTACAGTA 59.707 40.000 0.00 0.00 0.00 2.74
780 827 4.094887 CGGCTCATTTGCTATTTGTACAGT 59.905 41.667 0.00 0.00 0.00 3.55
781 828 4.094887 ACGGCTCATTTGCTATTTGTACAG 59.905 41.667 0.00 0.00 0.00 2.74
802 849 1.063806 CCTTGAGCTCTCACGAAACG 58.936 55.000 16.19 0.00 39.66 3.60
834 881 2.234908 GACCTGACTGTGCCACTAGATT 59.765 50.000 0.00 0.00 0.00 2.40
835 882 1.827969 GACCTGACTGTGCCACTAGAT 59.172 52.381 0.00 0.00 0.00 1.98
836 883 1.257743 GACCTGACTGTGCCACTAGA 58.742 55.000 0.00 0.00 0.00 2.43
837 884 0.969149 TGACCTGACTGTGCCACTAG 59.031 55.000 0.00 0.00 0.00 2.57
839 886 0.107456 CTTGACCTGACTGTGCCACT 59.893 55.000 0.00 0.00 0.00 4.00
840 887 0.886490 CCTTGACCTGACTGTGCCAC 60.886 60.000 0.00 0.00 0.00 5.01
841 888 1.451504 CCTTGACCTGACTGTGCCA 59.548 57.895 0.00 0.00 0.00 4.92
842 889 1.968540 GCCTTGACCTGACTGTGCC 60.969 63.158 0.00 0.00 0.00 5.01
843 890 1.968540 GGCCTTGACCTGACTGTGC 60.969 63.158 0.00 0.00 0.00 4.57
844 891 0.179020 TTGGCCTTGACCTGACTGTG 60.179 55.000 3.32 0.00 0.00 3.66
845 892 0.109342 CTTGGCCTTGACCTGACTGT 59.891 55.000 3.32 0.00 0.00 3.55
854 913 2.795231 CAAGATCTCCTTGGCCTTGA 57.205 50.000 3.32 0.00 46.54 3.02
871 930 1.374885 CCCATACGACACGTGGCAA 60.375 57.895 23.63 9.32 41.39 4.52
1010 1069 4.084589 GGTGATGGTTTTGTTTTTGATCGC 60.085 41.667 0.00 0.00 0.00 4.58
1043 1102 2.930019 TGTGTGGCCTCAGGGGAG 60.930 66.667 7.99 0.00 41.02 4.30
1076 1143 5.293079 CCTCTCGAGGTTTTCTTGATGAATC 59.707 44.000 13.56 0.00 43.61 2.52
1093 1160 2.203082 CCGGCCATGATCCTCTCGA 61.203 63.158 2.24 0.00 0.00 4.04
1354 1421 3.774702 GAGCAACGAACCGACGGC 61.775 66.667 15.39 0.00 37.61 5.68
1363 1430 1.428448 CGGTGAGAAATGAGCAACGA 58.572 50.000 0.00 0.00 44.87 3.85
1364 1431 0.443869 CCGGTGAGAAATGAGCAACG 59.556 55.000 0.00 0.00 41.99 4.10
1380 1451 4.143347 CGCAAAAATCATCAAAAAGTCCGG 60.143 41.667 0.00 0.00 0.00 5.14
1385 1456 4.085158 TCACGCGCAAAAATCATCAAAAAG 60.085 37.500 5.73 0.00 0.00 2.27
1395 1478 1.131126 CTCCTGATCACGCGCAAAAAT 59.869 47.619 5.73 0.00 0.00 1.82
1555 1638 2.070039 CCGGCCATGGAGGGTTAGA 61.070 63.158 18.40 0.00 38.09 2.10
1556 1639 1.418908 ATCCGGCCATGGAGGGTTAG 61.419 60.000 18.40 0.00 42.45 2.34
1561 1644 1.526917 GTTCATCCGGCCATGGAGG 60.527 63.158 18.40 18.01 42.45 4.30
1786 1873 1.199624 GAAACACTTGCGCAGTTTGG 58.800 50.000 25.26 11.81 35.77 3.28
1806 1897 2.987149 CAGCGACGATAACTTCACAGTT 59.013 45.455 0.00 0.00 45.73 3.16
1835 1926 7.713734 AAACAGAATTCCACTTGATGATGAT 57.286 32.000 0.65 0.00 0.00 2.45
1836 1927 7.231115 TGAAAACAGAATTCCACTTGATGATGA 59.769 33.333 0.65 0.00 0.00 2.92
1837 1928 7.327761 GTGAAAACAGAATTCCACTTGATGATG 59.672 37.037 0.65 0.00 0.00 3.07
1858 1949 7.269522 TGCATATATCCATATCCAGGTGAAA 57.730 36.000 0.00 0.00 0.00 2.69
1859 1950 6.889595 TGCATATATCCATATCCAGGTGAA 57.110 37.500 0.00 0.00 0.00 3.18
1861 1952 6.598503 ACATGCATATATCCATATCCAGGTG 58.401 40.000 0.00 0.00 0.00 4.00
1862 1953 6.836714 ACATGCATATATCCATATCCAGGT 57.163 37.500 0.00 0.00 0.00 4.00
1863 1954 7.389884 GCTAACATGCATATATCCATATCCAGG 59.610 40.741 0.00 0.00 0.00 4.45
1864 1955 7.935210 TGCTAACATGCATATATCCATATCCAG 59.065 37.037 0.00 0.00 38.12 3.86
1882 1973 6.484643 GGATGTGACAAGATACATGCTAACAT 59.515 38.462 0.00 0.00 40.91 2.71
1883 1974 5.817296 GGATGTGACAAGATACATGCTAACA 59.183 40.000 0.00 0.00 40.91 2.41
1884 1975 5.817296 TGGATGTGACAAGATACATGCTAAC 59.183 40.000 9.61 0.00 43.40 2.34
1885 1976 5.988287 TGGATGTGACAAGATACATGCTAA 58.012 37.500 9.61 0.00 43.40 3.09
1886 1977 5.363580 TCTGGATGTGACAAGATACATGCTA 59.636 40.000 9.61 0.00 43.40 3.49
1887 1978 4.162888 TCTGGATGTGACAAGATACATGCT 59.837 41.667 9.61 0.00 43.40 3.79
1888 1979 4.445453 TCTGGATGTGACAAGATACATGC 58.555 43.478 0.00 0.00 43.34 4.06
1889 1980 5.006068 CGTTCTGGATGTGACAAGATACATG 59.994 44.000 0.00 0.00 37.63 3.21
1890 1981 5.111989 CGTTCTGGATGTGACAAGATACAT 58.888 41.667 0.00 0.00 40.04 2.29
1891 1982 4.494484 CGTTCTGGATGTGACAAGATACA 58.506 43.478 0.00 0.00 0.00 2.29
1892 1983 3.307242 GCGTTCTGGATGTGACAAGATAC 59.693 47.826 0.00 0.00 0.00 2.24
1893 1984 3.521560 GCGTTCTGGATGTGACAAGATA 58.478 45.455 0.00 0.00 0.00 1.98
1894 1985 2.350522 GCGTTCTGGATGTGACAAGAT 58.649 47.619 0.00 0.00 0.00 2.40
1895 1986 1.795768 GCGTTCTGGATGTGACAAGA 58.204 50.000 0.00 0.00 0.00 3.02
1913 2004 6.595772 AGATTCTAACTGATGAATGTTCGC 57.404 37.500 0.00 0.00 33.60 4.70
1959 2051 4.274950 GTGTTTTCCCAACTGATCTCGAAA 59.725 41.667 0.00 0.00 0.00 3.46
1995 2087 9.331282 AGTTAGAATCAGCTTGGTATCATTTAC 57.669 33.333 0.00 0.00 0.00 2.01
1997 2089 8.270744 AGAGTTAGAATCAGCTTGGTATCATTT 58.729 33.333 0.00 0.00 0.00 2.32
1998 2090 7.800092 AGAGTTAGAATCAGCTTGGTATCATT 58.200 34.615 0.00 0.00 0.00 2.57
2000 2092 6.798427 AGAGTTAGAATCAGCTTGGTATCA 57.202 37.500 0.00 0.00 0.00 2.15
2001 2093 7.383843 GCTTAGAGTTAGAATCAGCTTGGTATC 59.616 40.741 0.00 0.00 0.00 2.24
2005 2097 5.423015 TGCTTAGAGTTAGAATCAGCTTGG 58.577 41.667 0.00 0.00 0.00 3.61
2006 2098 6.974932 TTGCTTAGAGTTAGAATCAGCTTG 57.025 37.500 0.00 0.00 0.00 4.01
2009 2101 7.629130 CATCTTTGCTTAGAGTTAGAATCAGC 58.371 38.462 0.00 0.00 0.00 4.26
2010 2102 7.629130 GCATCTTTGCTTAGAGTTAGAATCAG 58.371 38.462 0.00 0.00 45.77 2.90
2011 2103 7.545362 GCATCTTTGCTTAGAGTTAGAATCA 57.455 36.000 0.00 0.00 45.77 2.57
2027 2119 3.374220 TCAGCTTGGTTTGCATCTTTG 57.626 42.857 0.00 0.00 0.00 2.77
2028 2120 4.312443 CAATCAGCTTGGTTTGCATCTTT 58.688 39.130 0.00 0.00 0.00 2.52
2030 2122 3.587797 CAATCAGCTTGGTTTGCATCT 57.412 42.857 0.00 0.00 0.00 2.90
2051 2143 3.181467 TGGCAAATATGGTGGCTTTATGC 60.181 43.478 12.65 0.00 41.87 3.14
2052 2144 4.624015 CTGGCAAATATGGTGGCTTTATG 58.376 43.478 12.65 0.00 41.87 1.90
2053 2145 3.070015 GCTGGCAAATATGGTGGCTTTAT 59.930 43.478 12.65 0.00 41.87 1.40
2055 2147 1.207811 GCTGGCAAATATGGTGGCTTT 59.792 47.619 12.65 0.00 41.87 3.51
2056 2148 0.826062 GCTGGCAAATATGGTGGCTT 59.174 50.000 12.65 0.00 41.87 4.35
2057 2149 1.044790 GGCTGGCAAATATGGTGGCT 61.045 55.000 12.65 0.00 41.87 4.75
2058 2150 1.329171 TGGCTGGCAAATATGGTGGC 61.329 55.000 0.00 6.33 41.71 5.01
2059 2151 0.461135 GTGGCTGGCAAATATGGTGG 59.539 55.000 5.14 0.00 0.00 4.61
2060 2152 0.101040 CGTGGCTGGCAAATATGGTG 59.899 55.000 5.14 0.00 0.00 4.17
2076 2176 3.114065 GGAAATCTAACTAGGCGACGTG 58.886 50.000 0.00 0.00 0.00 4.49
2082 2182 6.056236 CCTAACCTTGGAAATCTAACTAGGC 58.944 44.000 0.00 0.00 0.00 3.93
2091 2206 6.263617 TGTGTTGTAACCTAACCTTGGAAATC 59.736 38.462 0.00 0.00 0.00 2.17
2095 2210 4.774660 TGTGTTGTAACCTAACCTTGGA 57.225 40.909 0.00 0.00 0.00 3.53
2188 2303 3.030291 TCCCTGGATGCGCATAATTTTT 58.970 40.909 25.40 0.00 0.00 1.94
2193 2308 1.877680 CGATTCCCTGGATGCGCATAA 60.878 52.381 25.40 13.40 0.00 1.90
2273 2520 6.212388 ACTTAGACTCATCAAGGTTCACTGAT 59.788 38.462 0.00 0.00 0.00 2.90
2274 2521 5.540337 ACTTAGACTCATCAAGGTTCACTGA 59.460 40.000 0.00 0.00 0.00 3.41
2277 2524 5.542779 ACACTTAGACTCATCAAGGTTCAC 58.457 41.667 0.00 0.00 0.00 3.18
2312 2559 4.208746 TGTACACCGGACTTTGGAATTTT 58.791 39.130 9.46 0.00 0.00 1.82
2501 3549 5.632034 AAAACCTCCTACTGACTTGACTT 57.368 39.130 0.00 0.00 0.00 3.01
2516 3564 7.410485 CACTCACTTGTCTAAAGAAAAACCTC 58.590 38.462 0.00 0.00 0.00 3.85
2555 3603 3.827302 ACTATGACCAGCCTTATAGACCG 59.173 47.826 0.00 0.00 0.00 4.79
2561 3609 3.900601 CTCCTCACTATGACCAGCCTTAT 59.099 47.826 0.00 0.00 0.00 1.73
2565 3613 1.490574 ACTCCTCACTATGACCAGCC 58.509 55.000 0.00 0.00 0.00 4.85
2566 3614 4.946478 ATTACTCCTCACTATGACCAGC 57.054 45.455 0.00 0.00 0.00 4.85
2567 3615 9.915629 GTATAAATTACTCCTCACTATGACCAG 57.084 37.037 0.00 0.00 0.00 4.00
2568 3616 9.656323 AGTATAAATTACTCCTCACTATGACCA 57.344 33.333 0.00 0.00 0.00 4.02
2575 3623 9.696572 TGACACTAGTATAAATTACTCCTCACT 57.303 33.333 0.00 0.00 0.00 3.41
2579 3627 9.656323 TGGATGACACTAGTATAAATTACTCCT 57.344 33.333 0.00 0.00 0.00 3.69
2597 3645 4.226384 AGGCTAGTGACATATGGATGACA 58.774 43.478 7.80 0.00 35.73 3.58
2598 3646 4.881019 AGGCTAGTGACATATGGATGAC 57.119 45.455 7.80 0.00 36.48 3.06
2599 3647 6.077993 ACTTAGGCTAGTGACATATGGATGA 58.922 40.000 7.80 0.00 36.48 2.92
2600 3648 6.352016 ACTTAGGCTAGTGACATATGGATG 57.648 41.667 7.80 0.00 39.16 3.51
2601 3649 7.730784 AGTAACTTAGGCTAGTGACATATGGAT 59.269 37.037 7.80 0.00 32.71 3.41
2602 3650 7.067421 AGTAACTTAGGCTAGTGACATATGGA 58.933 38.462 7.80 0.00 32.71 3.41
2603 3651 7.291411 AGTAACTTAGGCTAGTGACATATGG 57.709 40.000 7.80 0.00 32.71 2.74
2604 3652 8.298140 GGTAGTAACTTAGGCTAGTGACATATG 58.702 40.741 0.00 0.00 32.71 1.78
2605 3653 8.226112 AGGTAGTAACTTAGGCTAGTGACATAT 58.774 37.037 11.70 0.00 32.71 1.78
2606 3654 7.580910 AGGTAGTAACTTAGGCTAGTGACATA 58.419 38.462 11.70 2.88 32.71 2.29
2607 3655 6.433441 AGGTAGTAACTTAGGCTAGTGACAT 58.567 40.000 11.70 3.51 32.71 3.06
2608 3656 5.824421 AGGTAGTAACTTAGGCTAGTGACA 58.176 41.667 11.70 0.00 32.71 3.58
2609 3657 5.299028 GGAGGTAGTAACTTAGGCTAGTGAC 59.701 48.000 0.00 0.00 30.72 3.67
2610 3658 5.044624 TGGAGGTAGTAACTTAGGCTAGTGA 60.045 44.000 0.00 0.00 0.00 3.41
2611 3659 5.198965 TGGAGGTAGTAACTTAGGCTAGTG 58.801 45.833 0.00 0.00 0.00 2.74
2612 3660 5.463051 TGGAGGTAGTAACTTAGGCTAGT 57.537 43.478 0.00 0.00 0.00 2.57
2613 3661 7.175293 CACTATGGAGGTAGTAACTTAGGCTAG 59.825 44.444 0.00 0.00 33.29 3.42
2614 3662 7.002879 CACTATGGAGGTAGTAACTTAGGCTA 58.997 42.308 0.00 0.00 33.29 3.93
2615 3663 5.834204 CACTATGGAGGTAGTAACTTAGGCT 59.166 44.000 0.00 0.00 33.29 4.58
2616 3664 5.509332 GCACTATGGAGGTAGTAACTTAGGC 60.509 48.000 0.00 0.00 33.29 3.93
2617 3665 5.597182 TGCACTATGGAGGTAGTAACTTAGG 59.403 44.000 0.00 0.00 33.29 2.69
2618 3666 6.710597 TGCACTATGGAGGTAGTAACTTAG 57.289 41.667 0.00 0.00 33.29 2.18
2619 3667 7.179694 ACTTTGCACTATGGAGGTAGTAACTTA 59.820 37.037 0.00 0.00 33.29 2.24
2620 3668 6.013639 ACTTTGCACTATGGAGGTAGTAACTT 60.014 38.462 0.00 0.00 33.29 2.66
2621 3669 5.484290 ACTTTGCACTATGGAGGTAGTAACT 59.516 40.000 0.00 0.00 33.29 2.24
2622 3670 5.731591 ACTTTGCACTATGGAGGTAGTAAC 58.268 41.667 0.00 0.00 33.29 2.50
2623 3671 7.343574 TGATACTTTGCACTATGGAGGTAGTAA 59.656 37.037 0.00 0.00 33.29 2.24
2624 3672 6.837048 TGATACTTTGCACTATGGAGGTAGTA 59.163 38.462 0.00 0.00 33.29 1.82
2625 3673 5.661312 TGATACTTTGCACTATGGAGGTAGT 59.339 40.000 0.00 0.00 35.34 2.73
2626 3674 6.161855 TGATACTTTGCACTATGGAGGTAG 57.838 41.667 0.00 0.00 0.00 3.18
2627 3675 6.747414 ATGATACTTTGCACTATGGAGGTA 57.253 37.500 0.00 0.00 0.00 3.08
2628 3676 5.636903 ATGATACTTTGCACTATGGAGGT 57.363 39.130 0.00 0.00 0.00 3.85
2629 3677 6.763355 ACTATGATACTTTGCACTATGGAGG 58.237 40.000 0.00 0.00 0.00 4.30
2630 3678 8.580720 ACTACTATGATACTTTGCACTATGGAG 58.419 37.037 0.00 0.00 0.00 3.86
2631 3679 8.478775 ACTACTATGATACTTTGCACTATGGA 57.521 34.615 0.00 0.00 0.00 3.41
2632 3680 9.847706 CTACTACTATGATACTTTGCACTATGG 57.152 37.037 0.00 0.00 0.00 2.74
2635 3683 9.404848 ACACTACTACTATGATACTTTGCACTA 57.595 33.333 0.00 0.00 0.00 2.74
2636 3684 8.294954 ACACTACTACTATGATACTTTGCACT 57.705 34.615 0.00 0.00 0.00 4.40
2637 3685 8.188799 TGACACTACTACTATGATACTTTGCAC 58.811 37.037 0.00 0.00 0.00 4.57
2638 3686 8.288689 TGACACTACTACTATGATACTTTGCA 57.711 34.615 0.00 0.00 0.00 4.08
2679 3727 8.844244 CAAGGCAAAATGAGTCTATAAGCTAAT 58.156 33.333 0.00 0.00 0.00 1.73
2680 3728 7.283127 CCAAGGCAAAATGAGTCTATAAGCTAA 59.717 37.037 0.00 0.00 0.00 3.09
2681 3729 6.767902 CCAAGGCAAAATGAGTCTATAAGCTA 59.232 38.462 0.00 0.00 0.00 3.32
2682 3730 5.591877 CCAAGGCAAAATGAGTCTATAAGCT 59.408 40.000 0.00 0.00 0.00 3.74
2683 3731 5.221126 CCCAAGGCAAAATGAGTCTATAAGC 60.221 44.000 0.00 0.00 0.00 3.09
2684 3732 6.122277 TCCCAAGGCAAAATGAGTCTATAAG 58.878 40.000 0.00 0.00 0.00 1.73
2685 3733 6.073447 TCCCAAGGCAAAATGAGTCTATAA 57.927 37.500 0.00 0.00 0.00 0.98
2686 3734 5.708736 TCCCAAGGCAAAATGAGTCTATA 57.291 39.130 0.00 0.00 0.00 1.31
2687 3735 4.591321 TCCCAAGGCAAAATGAGTCTAT 57.409 40.909 0.00 0.00 0.00 1.98
2688 3736 4.335416 CTTCCCAAGGCAAAATGAGTCTA 58.665 43.478 0.00 0.00 0.00 2.59
2689 3737 2.978156 TCCCAAGGCAAAATGAGTCT 57.022 45.000 0.00 0.00 0.00 3.24
2690 3738 2.353109 GCTTCCCAAGGCAAAATGAGTC 60.353 50.000 0.00 0.00 0.00 3.36
2691 3739 1.620323 GCTTCCCAAGGCAAAATGAGT 59.380 47.619 0.00 0.00 0.00 3.41
2692 3740 1.403249 CGCTTCCCAAGGCAAAATGAG 60.403 52.381 0.00 0.00 0.00 2.90
2693 3741 0.602562 CGCTTCCCAAGGCAAAATGA 59.397 50.000 0.00 0.00 0.00 2.57
2694 3742 1.015607 GCGCTTCCCAAGGCAAAATG 61.016 55.000 0.00 0.00 0.00 2.32
2695 3743 1.187567 AGCGCTTCCCAAGGCAAAAT 61.188 50.000 2.64 0.00 0.00 1.82
2696 3744 0.538516 TAGCGCTTCCCAAGGCAAAA 60.539 50.000 18.68 0.00 0.00 2.44
2697 3745 0.323360 ATAGCGCTTCCCAAGGCAAA 60.323 50.000 18.68 0.00 0.00 3.68
2698 3746 1.031571 CATAGCGCTTCCCAAGGCAA 61.032 55.000 18.68 0.00 0.00 4.52
2699 3747 1.451927 CATAGCGCTTCCCAAGGCA 60.452 57.895 18.68 0.00 0.00 4.75
2700 3748 1.032114 AACATAGCGCTTCCCAAGGC 61.032 55.000 18.68 0.00 0.00 4.35
2701 3749 1.940613 GTAACATAGCGCTTCCCAAGG 59.059 52.381 18.68 0.00 0.00 3.61
2702 3750 2.609459 CTGTAACATAGCGCTTCCCAAG 59.391 50.000 18.68 0.00 0.00 3.61
2703 3751 2.027561 ACTGTAACATAGCGCTTCCCAA 60.028 45.455 18.68 0.00 0.00 4.12
2704 3752 1.553248 ACTGTAACATAGCGCTTCCCA 59.447 47.619 18.68 0.00 0.00 4.37
2705 3753 2.311124 ACTGTAACATAGCGCTTCCC 57.689 50.000 18.68 0.00 0.00 3.97
2706 3754 4.178540 TGTTACTGTAACATAGCGCTTCC 58.821 43.478 25.14 0.00 43.23 3.46
2727 3775 8.964476 AGAGGTGTTTGGAGTAACATAATATG 57.036 34.615 0.00 0.00 39.93 1.78
2728 3776 8.993424 AGAGAGGTGTTTGGAGTAACATAATAT 58.007 33.333 0.00 0.00 39.93 1.28
2729 3777 8.375493 AGAGAGGTGTTTGGAGTAACATAATA 57.625 34.615 0.00 0.00 39.93 0.98
2730 3778 7.259088 AGAGAGGTGTTTGGAGTAACATAAT 57.741 36.000 0.00 0.00 39.93 1.28
2731 3779 6.295688 GGAGAGAGGTGTTTGGAGTAACATAA 60.296 42.308 0.00 0.00 39.93 1.90
2732 3780 5.187186 GGAGAGAGGTGTTTGGAGTAACATA 59.813 44.000 0.00 0.00 39.93 2.29
2733 3781 4.020128 GGAGAGAGGTGTTTGGAGTAACAT 60.020 45.833 0.00 0.00 39.93 2.71
2734 3782 3.323979 GGAGAGAGGTGTTTGGAGTAACA 59.676 47.826 0.00 0.00 35.75 2.41
2735 3783 3.579151 AGGAGAGAGGTGTTTGGAGTAAC 59.421 47.826 0.00 0.00 0.00 2.50
2736 3784 3.833070 GAGGAGAGAGGTGTTTGGAGTAA 59.167 47.826 0.00 0.00 0.00 2.24
2737 3785 3.181422 TGAGGAGAGAGGTGTTTGGAGTA 60.181 47.826 0.00 0.00 0.00 2.59
2738 3786 2.252714 GAGGAGAGAGGTGTTTGGAGT 58.747 52.381 0.00 0.00 0.00 3.85
2739 3787 2.251818 TGAGGAGAGAGGTGTTTGGAG 58.748 52.381 0.00 0.00 0.00 3.86
2740 3788 2.398754 TGAGGAGAGAGGTGTTTGGA 57.601 50.000 0.00 0.00 0.00 3.53
2741 3789 3.710209 AATGAGGAGAGAGGTGTTTGG 57.290 47.619 0.00 0.00 0.00 3.28
2742 3790 8.043710 AGTATTTAATGAGGAGAGAGGTGTTTG 58.956 37.037 0.00 0.00 0.00 2.93
2743 3791 8.152023 AGTATTTAATGAGGAGAGAGGTGTTT 57.848 34.615 0.00 0.00 0.00 2.83
2744 3792 7.741554 AGTATTTAATGAGGAGAGAGGTGTT 57.258 36.000 0.00 0.00 0.00 3.32
2745 3793 7.560368 CAAGTATTTAATGAGGAGAGAGGTGT 58.440 38.462 0.00 0.00 0.00 4.16
2746 3794 6.481644 GCAAGTATTTAATGAGGAGAGAGGTG 59.518 42.308 0.00 0.00 0.00 4.00
2747 3795 6.408662 GGCAAGTATTTAATGAGGAGAGAGGT 60.409 42.308 0.00 0.00 0.00 3.85
2748 3796 5.994668 GGCAAGTATTTAATGAGGAGAGAGG 59.005 44.000 0.00 0.00 0.00 3.69
2749 3797 6.481644 GTGGCAAGTATTTAATGAGGAGAGAG 59.518 42.308 0.00 0.00 0.00 3.20
2750 3798 6.070251 TGTGGCAAGTATTTAATGAGGAGAGA 60.070 38.462 0.00 0.00 0.00 3.10
2751 3799 6.115446 TGTGGCAAGTATTTAATGAGGAGAG 58.885 40.000 0.00 0.00 0.00 3.20
2752 3800 6.061022 TGTGGCAAGTATTTAATGAGGAGA 57.939 37.500 0.00 0.00 0.00 3.71
2753 3801 6.949352 ATGTGGCAAGTATTTAATGAGGAG 57.051 37.500 0.00 0.00 0.00 3.69
2754 3802 7.013274 GCTTATGTGGCAAGTATTTAATGAGGA 59.987 37.037 0.00 0.00 0.00 3.71
2755 3803 7.141363 GCTTATGTGGCAAGTATTTAATGAGG 58.859 38.462 0.00 0.00 0.00 3.86
2756 3804 7.706159 TGCTTATGTGGCAAGTATTTAATGAG 58.294 34.615 0.00 0.00 36.71 2.90
2757 3805 7.637631 TGCTTATGTGGCAAGTATTTAATGA 57.362 32.000 0.00 0.00 36.71 2.57
2768 3816 5.212532 AGACAATTTTGCTTATGTGGCAA 57.787 34.783 0.00 0.00 46.12 4.52
2769 3817 4.870123 AGACAATTTTGCTTATGTGGCA 57.130 36.364 0.00 0.00 37.97 4.92
2770 3818 4.389687 CCAAGACAATTTTGCTTATGTGGC 59.610 41.667 0.00 0.00 0.00 5.01
2771 3819 4.931002 CCCAAGACAATTTTGCTTATGTGG 59.069 41.667 0.00 0.00 0.00 4.17
2772 3820 4.931002 CCCCAAGACAATTTTGCTTATGTG 59.069 41.667 0.00 0.00 0.00 3.21
2773 3821 4.592778 ACCCCAAGACAATTTTGCTTATGT 59.407 37.500 0.00 0.00 0.00 2.29
2774 3822 4.931002 CACCCCAAGACAATTTTGCTTATG 59.069 41.667 0.00 0.00 0.00 1.90
2775 3823 4.592778 ACACCCCAAGACAATTTTGCTTAT 59.407 37.500 0.00 0.00 0.00 1.73
2776 3824 3.964031 ACACCCCAAGACAATTTTGCTTA 59.036 39.130 0.00 0.00 0.00 3.09
2777 3825 2.771372 ACACCCCAAGACAATTTTGCTT 59.229 40.909 0.00 0.00 0.00 3.91
2778 3826 2.102925 CACACCCCAAGACAATTTTGCT 59.897 45.455 0.00 0.00 0.00 3.91
2779 3827 2.158971 ACACACCCCAAGACAATTTTGC 60.159 45.455 0.00 0.00 0.00 3.68
2780 3828 3.817709 ACACACCCCAAGACAATTTTG 57.182 42.857 0.00 0.00 0.00 2.44
2781 3829 5.423931 ACTTAACACACCCCAAGACAATTTT 59.576 36.000 0.00 0.00 0.00 1.82
2782 3830 4.959839 ACTTAACACACCCCAAGACAATTT 59.040 37.500 0.00 0.00 0.00 1.82
2783 3831 4.542697 ACTTAACACACCCCAAGACAATT 58.457 39.130 0.00 0.00 0.00 2.32
2784 3832 4.178956 ACTTAACACACCCCAAGACAAT 57.821 40.909 0.00 0.00 0.00 2.71
2785 3833 3.655615 ACTTAACACACCCCAAGACAA 57.344 42.857 0.00 0.00 0.00 3.18
2786 3834 3.655615 AACTTAACACACCCCAAGACA 57.344 42.857 0.00 0.00 0.00 3.41
2787 3835 4.883006 TGTTAACTTAACACACCCCAAGAC 59.117 41.667 9.86 0.00 43.23 3.01
2788 3836 5.113446 TGTTAACTTAACACACCCCAAGA 57.887 39.130 9.86 0.00 43.23 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.