Multiple sequence alignment - TraesCS2A01G114300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G114300 chr2A 100.000 2159 0 0 409 2567 65398902 65401060 0.000000e+00 3988.0
1 TraesCS2A01G114300 chr2A 100.000 133 0 0 1 133 65398494 65398626 1.970000e-61 246.0
2 TraesCS2A01G114300 chr2A 86.458 96 10 1 519 611 210489239 210489144 4.520000e-18 102.0
3 TraesCS2A01G114300 chr2D 95.532 1119 40 8 644 1758 63706066 63707178 0.000000e+00 1781.0
4 TraesCS2A01G114300 chr2D 92.493 373 20 5 1424 1792 263486762 263487130 6.290000e-146 527.0
5 TraesCS2A01G114300 chr2D 86.337 344 44 1 1339 1682 274427619 274427959 3.120000e-99 372.0
6 TraesCS2A01G114300 chr2D 92.917 240 14 2 409 646 63705785 63706023 1.890000e-91 346.0
7 TraesCS2A01G114300 chr2D 93.897 213 12 1 984 1196 263479934 263480145 1.150000e-83 320.0
8 TraesCS2A01G114300 chr2D 84.512 297 30 9 2002 2288 63707881 63708171 1.940000e-71 279.0
9 TraesCS2A01G114300 chr2D 95.302 149 6 1 1260 1407 263485086 263485234 4.270000e-58 235.0
10 TraesCS2A01G114300 chr2D 97.744 133 3 0 1 133 63705519 63705651 1.990000e-56 230.0
11 TraesCS2A01G114300 chr2B 90.193 1397 86 29 409 1792 99951503 99952861 0.000000e+00 1773.0
12 TraesCS2A01G114300 chr1B 94.153 821 31 7 984 1797 322724219 322725029 0.000000e+00 1234.0
13 TraesCS2A01G114300 chr1B 96.145 441 16 1 1094 1534 676248319 676247880 0.000000e+00 719.0
14 TraesCS2A01G114300 chr6A 88.631 818 49 11 981 1792 256666552 256665773 0.000000e+00 955.0
15 TraesCS2A01G114300 chr6B 99.435 177 0 1 1828 2003 314576088 314575912 1.150000e-83 320.0
16 TraesCS2A01G114300 chr6B 100.000 170 0 0 1836 2005 52572445 52572614 5.330000e-82 315.0
17 TraesCS2A01G114300 chr7B 100.000 171 0 0 1837 2007 401536783 401536953 1.480000e-82 316.0
18 TraesCS2A01G114300 chr7B 91.919 99 4 2 519 614 610743843 610743746 4.460000e-28 135.0
19 TraesCS2A01G114300 chr7B 82.278 79 8 4 2298 2373 178406457 178406382 2.130000e-06 63.9
20 TraesCS2A01G114300 chrUn 100.000 170 0 0 1836 2005 48495356 48495525 5.330000e-82 315.0
21 TraesCS2A01G114300 chrUn 100.000 170 0 0 1836 2005 235110679 235110848 5.330000e-82 315.0
22 TraesCS2A01G114300 chrUn 100.000 170 0 0 1836 2005 386426342 386426511 5.330000e-82 315.0
23 TraesCS2A01G114300 chr7A 99.425 174 0 1 1831 2004 426576419 426576591 5.330000e-82 315.0
24 TraesCS2A01G114300 chr5A 98.324 179 1 2 1830 2007 403285630 403285453 1.920000e-81 313.0
25 TraesCS2A01G114300 chr4B 98.315 178 2 1 1827 2003 78609326 78609149 6.900000e-81 311.0
26 TraesCS2A01G114300 chr4D 89.474 95 6 2 519 610 337937078 337936985 1.610000e-22 117.0
27 TraesCS2A01G114300 chr4D 91.837 49 3 1 2291 2338 455628462 455628510 1.650000e-07 67.6
28 TraesCS2A01G114300 chr1A 89.362 94 6 1 519 608 12931647 12931554 5.800000e-22 115.0
29 TraesCS2A01G114300 chr5B 87.255 102 9 2 513 610 563360333 563360434 2.090000e-21 113.0
30 TraesCS2A01G114300 chr5B 86.275 102 10 3 512 610 229081771 229081671 9.710000e-20 108.0
31 TraesCS2A01G114300 chr7D 86.869 99 10 1 519 614 476679114 476679016 9.710000e-20 108.0
32 TraesCS2A01G114300 chr3B 87.234 94 9 1 519 609 18140533 18140440 1.260000e-18 104.0
33 TraesCS2A01G114300 chr3B 80.000 90 12 5 2298 2382 405817178 405817266 7.670000e-06 62.1
34 TraesCS2A01G114300 chr3D 85.556 90 8 3 2287 2374 152486740 152486654 3.520000e-14 89.8
35 TraesCS2A01G114300 chr3D 95.122 41 2 0 2298 2338 391635550 391635510 5.930000e-07 65.8
36 TraesCS2A01G114300 chr5D 85.542 83 8 3 2299 2380 238553875 238553954 1.640000e-12 84.2
37 TraesCS2A01G114300 chr6D 93.750 48 3 0 2291 2338 326981641 326981594 3.540000e-09 73.1
38 TraesCS2A01G114300 chr3A 87.302 63 2 5 2299 2356 56670189 56670250 1.650000e-07 67.6
39 TraesCS2A01G114300 chr1D 88.889 54 3 3 2299 2351 323935579 323935528 2.130000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G114300 chr2A 65398494 65401060 2566 False 2117 3988 100.00000 1 2567 2 chr2A.!!$F1 2566
1 TraesCS2A01G114300 chr2D 63705519 63708171 2652 False 659 1781 92.67625 1 2288 4 chr2D.!!$F3 2287
2 TraesCS2A01G114300 chr2D 263485086 263487130 2044 False 381 527 93.89750 1260 1792 2 chr2D.!!$F4 532
3 TraesCS2A01G114300 chr2B 99951503 99952861 1358 False 1773 1773 90.19300 409 1792 1 chr2B.!!$F1 1383
4 TraesCS2A01G114300 chr1B 322724219 322725029 810 False 1234 1234 94.15300 984 1797 1 chr1B.!!$F1 813
5 TraesCS2A01G114300 chr6A 256665773 256666552 779 True 955 955 88.63100 981 1792 1 chr6A.!!$R1 811

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
869 921 0.744414 ATCCAACGGCCGACAATCTG 60.744 55.0 35.9 17.22 0.0 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2293 4541 0.033306 GGGACGGAGGGAGTACTTCT 60.033 60.0 0.01 0.06 0.0 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 7.771183 TGATCTTTTGTGAACTTATTATGCCC 58.229 34.615 0.00 0.00 0.00 5.36
460 463 1.153726 ATAACGCGTCATCGGCACA 60.154 52.632 14.44 0.00 37.56 4.57
506 509 7.225145 CGTGTTCGGTTTTATATAGGGATTCAA 59.775 37.037 0.00 0.00 0.00 2.69
517 520 1.279271 AGGGATTCAACTCCTTCGTGG 59.721 52.381 0.00 0.00 35.50 4.94
525 528 7.148069 GGATTCAACTCCTTCGTGGAATAAATT 60.148 37.037 0.00 0.00 45.63 1.82
544 547 9.880157 AATAAATTCAGAAATAATGCAAGCACT 57.120 25.926 0.00 0.00 0.00 4.40
547 550 6.441093 TTCAGAAATAATGCAAGCACTAGG 57.559 37.500 0.00 0.00 0.00 3.02
560 563 2.025887 AGCACTAGGATTTGAACCCTGG 60.026 50.000 0.00 0.00 37.12 4.45
632 635 5.394333 GCTCCGGTTTGAATCTCTAGTAGTT 60.394 44.000 0.00 0.00 0.00 2.24
717 766 6.174760 GGTGTTAGGAACCACATATACACAA 58.825 40.000 0.00 0.00 37.08 3.33
726 775 4.702612 ACCACATATACACAAAATTCGGCA 59.297 37.500 0.00 0.00 0.00 5.69
744 793 3.489047 CGGCAAGCGATTTTTGAAAAAGA 59.511 39.130 9.13 0.00 0.00 2.52
746 795 5.333263 CGGCAAGCGATTTTTGAAAAAGAAT 60.333 36.000 9.13 0.00 0.00 2.40
749 798 7.096925 GGCAAGCGATTTTTGAAAAAGAATTTG 60.097 33.333 9.13 11.04 39.02 2.32
750 799 7.096925 GCAAGCGATTTTTGAAAAAGAATTTGG 60.097 33.333 9.13 0.00 39.02 3.28
751 800 7.552458 AGCGATTTTTGAAAAAGAATTTGGT 57.448 28.000 9.13 0.00 39.02 3.67
752 801 7.984391 AGCGATTTTTGAAAAAGAATTTGGTT 58.016 26.923 9.13 0.00 39.02 3.67
869 921 0.744414 ATCCAACGGCCGACAATCTG 60.744 55.000 35.90 17.22 0.00 2.90
1577 3155 0.539051 CTCATGTGAGGTGAGGGTCC 59.461 60.000 2.03 0.00 39.48 4.46
1614 3192 6.068010 TCTTGTGTTTACTGATTGGACCATT 58.932 36.000 0.00 0.00 0.00 3.16
1670 3252 4.471904 TTTCGAGAGTTCCTGCATATGT 57.528 40.909 4.29 0.00 0.00 2.29
1671 3253 4.471904 TTCGAGAGTTCCTGCATATGTT 57.528 40.909 4.29 0.00 0.00 2.71
1743 3325 7.201435 GCAAATTTTCGGTGATAATTGGTCTTC 60.201 37.037 0.00 0.00 0.00 2.87
1769 3963 4.650734 TCACCTGTGAGTGCATTAAATGA 58.349 39.130 0.00 0.00 37.68 2.57
1817 4057 7.424227 TTGTTCCATTCGTTTATTAGTCGTT 57.576 32.000 0.00 0.00 0.00 3.85
1818 4058 8.531622 TTGTTCCATTCGTTTATTAGTCGTTA 57.468 30.769 0.00 0.00 0.00 3.18
1819 4059 8.176814 TGTTCCATTCGTTTATTAGTCGTTAG 57.823 34.615 0.00 0.00 0.00 2.34
1820 4060 8.028354 TGTTCCATTCGTTTATTAGTCGTTAGA 58.972 33.333 0.00 0.00 0.00 2.10
1829 4069 2.879462 GTCGTTAGACGGCGCTGG 60.879 66.667 22.44 9.44 42.81 4.85
1830 4070 3.367743 TCGTTAGACGGCGCTGGT 61.368 61.111 22.44 13.03 42.81 4.00
1831 4071 2.431942 CGTTAGACGGCGCTGGTT 60.432 61.111 22.44 10.61 38.08 3.67
1832 4072 1.153978 CGTTAGACGGCGCTGGTTA 60.154 57.895 22.44 9.52 38.08 2.85
1833 4073 0.526954 CGTTAGACGGCGCTGGTTAT 60.527 55.000 22.44 5.58 38.08 1.89
1834 4074 0.928229 GTTAGACGGCGCTGGTTATG 59.072 55.000 22.44 0.00 0.00 1.90
1835 4075 0.533491 TTAGACGGCGCTGGTTATGT 59.467 50.000 22.44 0.00 0.00 2.29
1836 4076 0.179121 TAGACGGCGCTGGTTATGTG 60.179 55.000 22.44 0.00 0.00 3.21
1837 4077 1.447140 GACGGCGCTGGTTATGTGA 60.447 57.895 22.44 0.00 0.00 3.58
1838 4078 1.421410 GACGGCGCTGGTTATGTGAG 61.421 60.000 22.44 0.00 0.00 3.51
1839 4079 2.173669 CGGCGCTGGTTATGTGAGG 61.174 63.158 8.83 0.00 0.00 3.86
1840 4080 1.819632 GGCGCTGGTTATGTGAGGG 60.820 63.158 7.64 0.00 0.00 4.30
1841 4081 2.472909 GCGCTGGTTATGTGAGGGC 61.473 63.158 0.00 0.00 38.33 5.19
1842 4082 1.078497 CGCTGGTTATGTGAGGGCA 60.078 57.895 0.00 0.00 0.00 5.36
1843 4083 1.091771 CGCTGGTTATGTGAGGGCAG 61.092 60.000 0.00 0.00 0.00 4.85
1844 4084 0.749454 GCTGGTTATGTGAGGGCAGG 60.749 60.000 0.00 0.00 0.00 4.85
1845 4085 0.749454 CTGGTTATGTGAGGGCAGGC 60.749 60.000 0.00 0.00 0.00 4.85
1846 4086 1.453928 GGTTATGTGAGGGCAGGCC 60.454 63.158 4.33 4.33 0.00 5.19
1847 4087 1.609783 GTTATGTGAGGGCAGGCCT 59.390 57.895 17.36 17.36 36.10 5.19
1848 4088 0.749454 GTTATGTGAGGGCAGGCCTG 60.749 60.000 29.34 29.34 36.10 4.85
1849 4089 1.925285 TTATGTGAGGGCAGGCCTGG 61.925 60.000 33.46 15.81 36.10 4.45
1862 4102 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
1863 4103 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
1864 4104 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
1865 4105 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
1866 4106 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
1867 4107 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
1868 4108 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
1869 4109 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
1870 4110 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
1871 4111 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
1872 4112 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
1873 4113 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
1874 4114 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
1875 4115 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
1876 4116 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
1877 4117 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
1878 4118 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
1879 4119 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
1880 4120 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
1881 4121 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
1882 4122 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
1883 4123 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
1884 4124 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
1885 4125 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
1886 4126 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
1887 4127 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
1888 4128 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
1889 4129 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
1890 4130 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
1891 4131 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
1892 4132 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
1893 4133 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
1894 4134 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
1895 4135 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
1896 4136 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
1897 4137 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
1898 4138 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
1899 4139 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
1910 4150 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
1911 4151 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
1912 4152 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
1913 4153 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
1914 4154 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
1915 4155 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
1916 4156 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
1917 4157 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
1918 4158 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
1919 4159 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
1920 4160 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
1921 4161 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
1922 4162 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
1923 4163 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
1933 4173 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
1934 4174 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
1935 4175 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
1936 4176 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
1937 4177 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
1938 4178 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
1939 4179 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
1940 4180 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
1941 4181 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
1942 4182 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
1943 4183 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
1944 4184 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
1945 4185 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
1946 4186 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
1947 4187 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
1948 4188 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
1949 4189 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
1950 4190 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
1951 4191 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
1952 4192 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
1953 4193 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
1954 4194 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
1955 4195 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
1956 4196 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
1957 4197 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
1958 4198 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
1959 4199 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
1960 4200 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
1961 4201 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
1962 4202 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
1963 4203 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
1964 4204 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
1965 4205 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
1967 4207 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
1968 4208 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
1969 4209 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
1970 4210 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
1971 4211 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
1972 4212 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
1973 4213 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
1980 4220 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
1981 4221 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
1982 4222 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
1983 4223 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
1984 4224 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
1985 4225 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
1986 4226 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
1987 4227 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
1988 4228 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
1989 4229 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
1990 4230 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
1991 4231 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
1992 4232 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
1993 4233 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
1994 4234 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
1995 4235 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
1996 4236 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
1997 4237 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
1998 4238 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
1999 4239 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
2000 4240 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
2001 4241 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
2002 4242 0.773644 ATGCACTGGGTCTGTCCTTT 59.226 50.000 0.00 0.00 36.25 3.11
2003 4243 1.429930 TGCACTGGGTCTGTCCTTTA 58.570 50.000 0.00 0.00 36.25 1.85
2004 4244 1.347707 TGCACTGGGTCTGTCCTTTAG 59.652 52.381 0.00 0.00 36.25 1.85
2005 4245 1.623811 GCACTGGGTCTGTCCTTTAGA 59.376 52.381 0.00 0.00 36.25 2.10
2023 4263 1.693083 GACGGCGCTGGTTATGTGTC 61.693 60.000 22.44 1.96 0.00 3.67
2054 4294 8.525290 AAACCATATAACTGATCCTCTTTTGG 57.475 34.615 0.00 0.00 0.00 3.28
2055 4295 6.605119 ACCATATAACTGATCCTCTTTTGGG 58.395 40.000 0.00 0.00 0.00 4.12
2091 4331 9.282247 GTTAATTGAAGAAGTATGTTGCATCAG 57.718 33.333 3.50 0.00 0.00 2.90
2093 4333 6.882610 TTGAAGAAGTATGTTGCATCAGTT 57.117 33.333 3.50 0.00 0.00 3.16
2097 4337 4.878397 AGAAGTATGTTGCATCAGTTAGGC 59.122 41.667 3.50 0.00 34.77 3.93
2106 4346 7.282585 TGTTGCATCAGTTAGGCTAATAGAAT 58.717 34.615 10.65 0.00 35.40 2.40
2141 4387 6.161381 GTGATCTTCAATTTGGCACTTTGAT 58.839 36.000 10.96 0.00 0.00 2.57
2173 4420 2.682155 TATGCTGTTGCGGTGATGTA 57.318 45.000 0.00 0.00 43.34 2.29
2188 4435 5.116882 GGTGATGTATTGACTTACCTGGAC 58.883 45.833 0.00 0.00 0.00 4.02
2194 4441 7.914427 TGTATTGACTTACCTGGACTATCAT 57.086 36.000 0.00 0.00 0.00 2.45
2215 4463 6.009589 TCATTCAAGGACAGGAATGCTTTTA 58.990 36.000 8.98 0.00 46.23 1.52
2262 4510 5.869344 ACTCTTTTGTTTTGTTTCTTGAGGC 59.131 36.000 0.00 0.00 0.00 4.70
2263 4511 6.036577 TCTTTTGTTTTGTTTCTTGAGGCT 57.963 33.333 0.00 0.00 0.00 4.58
2271 4519 4.955811 TGTTTCTTGAGGCTCTCTGTAA 57.044 40.909 16.72 0.00 0.00 2.41
2274 4522 6.634805 TGTTTCTTGAGGCTCTCTGTAATAG 58.365 40.000 16.72 0.99 0.00 1.73
2288 4536 4.157105 TCTGTAATAGTGCTGTGCGAACTA 59.843 41.667 0.00 0.00 0.00 2.24
2289 4537 4.171005 TGTAATAGTGCTGTGCGAACTAC 58.829 43.478 0.00 0.00 0.00 2.73
2290 4538 3.594603 AATAGTGCTGTGCGAACTACT 57.405 42.857 0.00 0.00 0.00 2.57
2291 4539 3.594603 ATAGTGCTGTGCGAACTACTT 57.405 42.857 0.00 0.00 0.00 2.24
2292 4540 1.784525 AGTGCTGTGCGAACTACTTC 58.215 50.000 0.00 0.00 0.00 3.01
2293 4541 1.068588 AGTGCTGTGCGAACTACTTCA 59.931 47.619 0.00 0.00 0.00 3.02
2294 4542 1.457303 GTGCTGTGCGAACTACTTCAG 59.543 52.381 0.00 0.00 0.00 3.02
2295 4543 1.339929 TGCTGTGCGAACTACTTCAGA 59.660 47.619 0.00 0.00 0.00 3.27
2296 4544 2.223947 TGCTGTGCGAACTACTTCAGAA 60.224 45.455 0.00 0.00 0.00 3.02
2297 4545 2.410053 GCTGTGCGAACTACTTCAGAAG 59.590 50.000 8.77 8.77 0.00 2.85
2298 4546 3.643763 CTGTGCGAACTACTTCAGAAGT 58.356 45.455 19.81 19.81 45.40 3.01
2299 4547 4.795268 CTGTGCGAACTACTTCAGAAGTA 58.205 43.478 19.92 19.92 42.81 2.24
2300 4548 4.543692 TGTGCGAACTACTTCAGAAGTAC 58.456 43.478 17.71 10.32 42.81 2.73
2301 4549 4.277672 TGTGCGAACTACTTCAGAAGTACT 59.722 41.667 17.71 8.97 42.81 2.73
2302 4550 4.852650 GTGCGAACTACTTCAGAAGTACTC 59.147 45.833 17.71 15.20 42.81 2.59
2303 4551 4.082895 TGCGAACTACTTCAGAAGTACTCC 60.083 45.833 17.71 9.17 42.81 3.85
2304 4552 4.674885 GCGAACTACTTCAGAAGTACTCCC 60.675 50.000 17.71 7.49 42.81 4.30
2305 4553 4.701171 CGAACTACTTCAGAAGTACTCCCT 59.299 45.833 17.71 2.61 42.81 4.20
2306 4554 5.163733 CGAACTACTTCAGAAGTACTCCCTC 60.164 48.000 17.71 9.50 42.81 4.30
2307 4555 4.602107 ACTACTTCAGAAGTACTCCCTCC 58.398 47.826 17.71 0.00 42.81 4.30
2308 4556 2.448453 ACTTCAGAAGTACTCCCTCCG 58.552 52.381 14.58 0.00 40.69 4.63
2309 4557 2.225066 ACTTCAGAAGTACTCCCTCCGT 60.225 50.000 14.58 0.00 40.69 4.69
2310 4558 2.125773 TCAGAAGTACTCCCTCCGTC 57.874 55.000 0.00 0.00 0.00 4.79
2311 4559 1.104630 CAGAAGTACTCCCTCCGTCC 58.895 60.000 0.00 0.00 0.00 4.79
2312 4560 0.033306 AGAAGTACTCCCTCCGTCCC 60.033 60.000 0.00 0.00 0.00 4.46
2313 4561 1.379576 AAGTACTCCCTCCGTCCCG 60.380 63.158 0.00 0.00 0.00 5.14
2314 4562 2.044551 GTACTCCCTCCGTCCCGT 60.045 66.667 0.00 0.00 0.00 5.28
2315 4563 1.224592 GTACTCCCTCCGTCCCGTA 59.775 63.158 0.00 0.00 0.00 4.02
2316 4564 0.394352 GTACTCCCTCCGTCCCGTAA 60.394 60.000 0.00 0.00 0.00 3.18
2317 4565 0.552848 TACTCCCTCCGTCCCGTAAT 59.447 55.000 0.00 0.00 0.00 1.89
2318 4566 0.552848 ACTCCCTCCGTCCCGTAATA 59.447 55.000 0.00 0.00 0.00 0.98
2319 4567 1.146566 ACTCCCTCCGTCCCGTAATAT 59.853 52.381 0.00 0.00 0.00 1.28
2320 4568 2.376518 ACTCCCTCCGTCCCGTAATATA 59.623 50.000 0.00 0.00 0.00 0.86
2321 4569 3.181429 ACTCCCTCCGTCCCGTAATATAA 60.181 47.826 0.00 0.00 0.00 0.98
2322 4570 3.424703 TCCCTCCGTCCCGTAATATAAG 58.575 50.000 0.00 0.00 0.00 1.73
2323 4571 3.074390 TCCCTCCGTCCCGTAATATAAGA 59.926 47.826 0.00 0.00 0.00 2.10
2324 4572 3.442977 CCCTCCGTCCCGTAATATAAGAG 59.557 52.174 0.00 0.00 0.00 2.85
2325 4573 3.119566 CCTCCGTCCCGTAATATAAGAGC 60.120 52.174 0.00 0.00 0.00 4.09
2326 4574 2.485426 TCCGTCCCGTAATATAAGAGCG 59.515 50.000 0.00 0.00 0.00 5.03
2327 4575 2.227388 CCGTCCCGTAATATAAGAGCGT 59.773 50.000 0.00 0.00 0.00 5.07
2328 4576 3.304928 CCGTCCCGTAATATAAGAGCGTT 60.305 47.826 0.00 0.00 0.00 4.84
2329 4577 3.667261 CGTCCCGTAATATAAGAGCGTTG 59.333 47.826 0.00 0.00 0.00 4.10
2330 4578 4.614946 GTCCCGTAATATAAGAGCGTTGT 58.385 43.478 0.00 0.00 0.00 3.32
2331 4579 5.045872 GTCCCGTAATATAAGAGCGTTGTT 58.954 41.667 0.00 0.00 0.00 2.83
2332 4580 6.208644 GTCCCGTAATATAAGAGCGTTGTTA 58.791 40.000 0.00 0.00 0.00 2.41
2333 4581 6.697019 GTCCCGTAATATAAGAGCGTTGTTAA 59.303 38.462 0.00 0.00 0.00 2.01
2334 4582 6.697019 TCCCGTAATATAAGAGCGTTGTTAAC 59.303 38.462 0.00 0.00 0.00 2.01
2335 4583 6.476380 CCCGTAATATAAGAGCGTTGTTAACA 59.524 38.462 3.59 3.59 0.00 2.41
2336 4584 7.332530 CCGTAATATAAGAGCGTTGTTAACAC 58.667 38.462 8.07 3.09 0.00 3.32
2337 4585 7.221452 CCGTAATATAAGAGCGTTGTTAACACT 59.779 37.037 8.07 1.99 0.00 3.55
2338 4586 8.048436 CGTAATATAAGAGCGTTGTTAACACTG 58.952 37.037 8.07 4.83 0.00 3.66
2339 4587 9.079833 GTAATATAAGAGCGTTGTTAACACTGA 57.920 33.333 8.07 0.00 0.00 3.41
2340 4588 8.542497 AATATAAGAGCGTTGTTAACACTGAA 57.458 30.769 8.07 0.00 0.00 3.02
2341 4589 6.854496 ATAAGAGCGTTGTTAACACTGAAA 57.146 33.333 8.07 0.00 0.00 2.69
2342 4590 5.554822 AAGAGCGTTGTTAACACTGAAAA 57.445 34.783 8.07 0.00 0.00 2.29
2343 4591 4.905269 AGAGCGTTGTTAACACTGAAAAC 58.095 39.130 8.07 1.67 0.00 2.43
2344 4592 3.676540 AGCGTTGTTAACACTGAAAACG 58.323 40.909 19.02 19.02 42.30 3.60
2346 4594 3.676540 CGTTGTTAACACTGAAAACGCT 58.323 40.909 8.07 0.00 34.73 5.07
2347 4595 3.477090 CGTTGTTAACACTGAAAACGCTG 59.523 43.478 8.07 0.00 34.73 5.18
2348 4596 4.408694 GTTGTTAACACTGAAAACGCTGT 58.591 39.130 8.07 0.00 0.00 4.40
2349 4597 4.688511 TGTTAACACTGAAAACGCTGTT 57.311 36.364 3.59 0.00 0.00 3.16
2350 4598 5.798015 TGTTAACACTGAAAACGCTGTTA 57.202 34.783 3.59 0.00 0.00 2.41
2351 4599 6.366315 TGTTAACACTGAAAACGCTGTTAT 57.634 33.333 3.59 0.00 31.01 1.89
2352 4600 6.195868 TGTTAACACTGAAAACGCTGTTATG 58.804 36.000 3.59 0.00 31.01 1.90
2353 4601 4.893424 AACACTGAAAACGCTGTTATGT 57.107 36.364 0.00 0.00 0.00 2.29
2354 4602 4.893424 ACACTGAAAACGCTGTTATGTT 57.107 36.364 0.00 0.00 0.00 2.71
2355 4603 5.994887 ACACTGAAAACGCTGTTATGTTA 57.005 34.783 0.00 0.00 0.00 2.41
2356 4604 6.554334 ACACTGAAAACGCTGTTATGTTAT 57.446 33.333 0.00 0.00 0.00 1.89
2357 4605 6.370593 ACACTGAAAACGCTGTTATGTTATG 58.629 36.000 0.00 0.00 0.00 1.90
2358 4606 5.794945 CACTGAAAACGCTGTTATGTTATGG 59.205 40.000 0.00 0.00 0.00 2.74
2359 4607 5.106317 ACTGAAAACGCTGTTATGTTATGGG 60.106 40.000 0.00 0.00 0.00 4.00
2360 4608 4.762765 TGAAAACGCTGTTATGTTATGGGT 59.237 37.500 0.00 0.00 0.00 4.51
2361 4609 4.957759 AAACGCTGTTATGTTATGGGTC 57.042 40.909 0.00 0.00 0.00 4.46
2362 4610 2.546778 ACGCTGTTATGTTATGGGTCG 58.453 47.619 0.00 0.00 0.00 4.79
2363 4611 1.864711 CGCTGTTATGTTATGGGTCGG 59.135 52.381 0.00 0.00 0.00 4.79
2364 4612 2.482316 CGCTGTTATGTTATGGGTCGGA 60.482 50.000 0.00 0.00 0.00 4.55
2365 4613 3.131396 GCTGTTATGTTATGGGTCGGAG 58.869 50.000 0.00 0.00 0.00 4.63
2366 4614 3.728845 CTGTTATGTTATGGGTCGGAGG 58.271 50.000 0.00 0.00 0.00 4.30
2367 4615 2.436542 TGTTATGTTATGGGTCGGAGGG 59.563 50.000 0.00 0.00 0.00 4.30
2368 4616 2.701951 GTTATGTTATGGGTCGGAGGGA 59.298 50.000 0.00 0.00 0.00 4.20
2369 4617 1.424638 ATGTTATGGGTCGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
2370 4618 0.042131 TGTTATGGGTCGGAGGGAGT 59.958 55.000 0.00 0.00 0.00 3.85
2371 4619 1.288633 TGTTATGGGTCGGAGGGAGTA 59.711 52.381 0.00 0.00 0.00 2.59
2372 4620 1.962100 GTTATGGGTCGGAGGGAGTAG 59.038 57.143 0.00 0.00 0.00 2.57
2373 4621 1.526315 TATGGGTCGGAGGGAGTAGA 58.474 55.000 0.00 0.00 0.00 2.59
2374 4622 0.861155 ATGGGTCGGAGGGAGTAGAT 59.139 55.000 0.00 0.00 0.00 1.98
2375 4623 0.106167 TGGGTCGGAGGGAGTAGATG 60.106 60.000 0.00 0.00 0.00 2.90
2376 4624 0.106116 GGGTCGGAGGGAGTAGATGT 60.106 60.000 0.00 0.00 0.00 3.06
2377 4625 1.688627 GGGTCGGAGGGAGTAGATGTT 60.689 57.143 0.00 0.00 0.00 2.71
2378 4626 2.108970 GGTCGGAGGGAGTAGATGTTT 58.891 52.381 0.00 0.00 0.00 2.83
2379 4627 2.500504 GGTCGGAGGGAGTAGATGTTTT 59.499 50.000 0.00 0.00 0.00 2.43
2380 4628 3.430513 GGTCGGAGGGAGTAGATGTTTTC 60.431 52.174 0.00 0.00 0.00 2.29
2381 4629 3.194968 GTCGGAGGGAGTAGATGTTTTCA 59.805 47.826 0.00 0.00 0.00 2.69
2382 4630 3.194968 TCGGAGGGAGTAGATGTTTTCAC 59.805 47.826 0.00 0.00 0.00 3.18
2383 4631 3.056107 CGGAGGGAGTAGATGTTTTCACA 60.056 47.826 0.00 0.00 37.31 3.58
2385 4633 4.878397 GGAGGGAGTAGATGTTTTCACATG 59.122 45.833 0.00 0.00 44.22 3.21
2386 4634 5.338381 GGAGGGAGTAGATGTTTTCACATGA 60.338 44.000 0.00 0.00 44.22 3.07
2387 4635 5.738909 AGGGAGTAGATGTTTTCACATGAG 58.261 41.667 0.00 0.00 44.22 2.90
2388 4636 5.485353 AGGGAGTAGATGTTTTCACATGAGA 59.515 40.000 0.00 0.00 44.22 3.27
2389 4637 5.582665 GGGAGTAGATGTTTTCACATGAGAC 59.417 44.000 0.00 0.00 44.22 3.36
2390 4638 6.402222 GGAGTAGATGTTTTCACATGAGACT 58.598 40.000 0.00 0.00 44.22 3.24
2391 4639 7.363880 GGGAGTAGATGTTTTCACATGAGACTA 60.364 40.741 0.00 0.00 44.22 2.59
2392 4640 7.704472 GGAGTAGATGTTTTCACATGAGACTAG 59.296 40.741 0.00 0.00 44.22 2.57
2393 4641 8.128322 AGTAGATGTTTTCACATGAGACTAGT 57.872 34.615 0.00 0.00 44.22 2.57
2394 4642 8.031864 AGTAGATGTTTTCACATGAGACTAGTG 58.968 37.037 0.00 0.00 44.22 2.74
2395 4643 6.997655 AGATGTTTTCACATGAGACTAGTGA 58.002 36.000 0.00 0.00 44.22 3.41
2396 4644 7.095910 AGATGTTTTCACATGAGACTAGTGAG 58.904 38.462 0.00 0.00 44.22 3.51
2397 4645 4.991056 TGTTTTCACATGAGACTAGTGAGC 59.009 41.667 0.00 0.00 42.54 4.26
2398 4646 3.876274 TTCACATGAGACTAGTGAGCC 57.124 47.619 0.00 0.00 42.54 4.70
2399 4647 3.093057 TCACATGAGACTAGTGAGCCT 57.907 47.619 0.00 0.00 37.36 4.58
2400 4648 3.435275 TCACATGAGACTAGTGAGCCTT 58.565 45.455 0.00 0.00 37.36 4.35
2401 4649 3.834813 TCACATGAGACTAGTGAGCCTTT 59.165 43.478 0.00 0.00 37.36 3.11
2402 4650 3.931468 CACATGAGACTAGTGAGCCTTTG 59.069 47.826 0.00 0.00 35.33 2.77
2403 4651 3.055530 ACATGAGACTAGTGAGCCTTTGG 60.056 47.826 0.00 0.00 0.00 3.28
2404 4652 2.889512 TGAGACTAGTGAGCCTTTGGA 58.110 47.619 0.00 0.00 0.00 3.53
2405 4653 3.445008 TGAGACTAGTGAGCCTTTGGAT 58.555 45.455 0.00 0.00 0.00 3.41
2406 4654 3.196469 TGAGACTAGTGAGCCTTTGGATG 59.804 47.826 0.00 0.00 0.00 3.51
2407 4655 3.177228 AGACTAGTGAGCCTTTGGATGT 58.823 45.455 0.00 0.00 0.00 3.06
2408 4656 4.353777 AGACTAGTGAGCCTTTGGATGTA 58.646 43.478 0.00 0.00 0.00 2.29
2409 4657 4.160626 AGACTAGTGAGCCTTTGGATGTAC 59.839 45.833 0.00 0.00 0.00 2.90
2410 4658 3.838317 ACTAGTGAGCCTTTGGATGTACA 59.162 43.478 0.00 0.00 0.00 2.90
2411 4659 4.471386 ACTAGTGAGCCTTTGGATGTACAT 59.529 41.667 8.43 8.43 0.00 2.29
2412 4660 5.661312 ACTAGTGAGCCTTTGGATGTACATA 59.339 40.000 8.71 0.00 0.00 2.29
2413 4661 5.435686 AGTGAGCCTTTGGATGTACATAA 57.564 39.130 8.71 0.00 0.00 1.90
2414 4662 6.006275 AGTGAGCCTTTGGATGTACATAAT 57.994 37.500 8.71 0.00 0.00 1.28
2415 4663 5.824624 AGTGAGCCTTTGGATGTACATAATG 59.175 40.000 8.71 3.10 0.00 1.90
2416 4664 5.590259 GTGAGCCTTTGGATGTACATAATGT 59.410 40.000 8.71 0.00 0.00 2.71
2417 4665 6.095440 GTGAGCCTTTGGATGTACATAATGTT 59.905 38.462 8.71 0.00 0.00 2.71
2418 4666 6.095300 TGAGCCTTTGGATGTACATAATGTTG 59.905 38.462 8.71 0.00 0.00 3.33
2419 4667 5.951747 AGCCTTTGGATGTACATAATGTTGT 59.048 36.000 8.71 0.00 0.00 3.32
2420 4668 6.095440 AGCCTTTGGATGTACATAATGTTGTC 59.905 38.462 8.71 0.00 0.00 3.18
2421 4669 6.127758 GCCTTTGGATGTACATAATGTTGTCA 60.128 38.462 8.71 0.00 0.00 3.58
2422 4670 7.475015 CCTTTGGATGTACATAATGTTGTCAG 58.525 38.462 8.71 0.00 0.00 3.51
2423 4671 7.336679 CCTTTGGATGTACATAATGTTGTCAGA 59.663 37.037 8.71 0.00 0.00 3.27
2424 4672 8.628630 TTTGGATGTACATAATGTTGTCAGAA 57.371 30.769 8.71 0.00 0.00 3.02
2425 4673 7.848223 TGGATGTACATAATGTTGTCAGAAG 57.152 36.000 8.71 0.00 0.00 2.85
2426 4674 7.394016 TGGATGTACATAATGTTGTCAGAAGT 58.606 34.615 8.71 0.00 0.00 3.01
2427 4675 7.882791 TGGATGTACATAATGTTGTCAGAAGTT 59.117 33.333 8.71 0.00 0.00 2.66
2428 4676 9.378551 GGATGTACATAATGTTGTCAGAAGTTA 57.621 33.333 8.71 0.00 0.00 2.24
2431 4679 9.990360 TGTACATAATGTTGTCAGAAGTTAGAA 57.010 29.630 0.00 0.00 0.00 2.10
2434 4682 8.454106 ACATAATGTTGTCAGAAGTTAGAATGC 58.546 33.333 0.00 0.00 0.00 3.56
2435 4683 5.886960 ATGTTGTCAGAAGTTAGAATGCC 57.113 39.130 0.00 0.00 0.00 4.40
2436 4684 4.072131 TGTTGTCAGAAGTTAGAATGCCC 58.928 43.478 0.00 0.00 0.00 5.36
2437 4685 2.972625 TGTCAGAAGTTAGAATGCCCG 58.027 47.619 0.00 0.00 0.00 6.13
2438 4686 2.301870 TGTCAGAAGTTAGAATGCCCGT 59.698 45.455 0.00 0.00 0.00 5.28
2439 4687 3.512329 TGTCAGAAGTTAGAATGCCCGTA 59.488 43.478 0.00 0.00 0.00 4.02
2440 4688 4.020928 TGTCAGAAGTTAGAATGCCCGTAA 60.021 41.667 0.00 0.00 0.00 3.18
2441 4689 4.933400 GTCAGAAGTTAGAATGCCCGTAAA 59.067 41.667 0.00 0.00 0.00 2.01
2442 4690 4.933400 TCAGAAGTTAGAATGCCCGTAAAC 59.067 41.667 0.00 0.00 0.00 2.01
2443 4691 4.693566 CAGAAGTTAGAATGCCCGTAAACA 59.306 41.667 0.00 0.00 0.00 2.83
2444 4692 5.180492 CAGAAGTTAGAATGCCCGTAAACAA 59.820 40.000 0.00 0.00 0.00 2.83
2445 4693 5.944007 AGAAGTTAGAATGCCCGTAAACAAT 59.056 36.000 0.00 0.00 0.00 2.71
2446 4694 7.065324 CAGAAGTTAGAATGCCCGTAAACAATA 59.935 37.037 0.00 0.00 0.00 1.90
2447 4695 7.608761 AGAAGTTAGAATGCCCGTAAACAATAA 59.391 33.333 0.00 0.00 0.00 1.40
2448 4696 7.080353 AGTTAGAATGCCCGTAAACAATAAC 57.920 36.000 0.00 0.00 0.00 1.89
2449 4697 4.976224 AGAATGCCCGTAAACAATAACC 57.024 40.909 0.00 0.00 0.00 2.85
2450 4698 3.375922 AGAATGCCCGTAAACAATAACCG 59.624 43.478 0.00 0.00 0.00 4.44
2451 4699 0.803740 TGCCCGTAAACAATAACCGC 59.196 50.000 0.00 0.00 0.00 5.68
2452 4700 0.099259 GCCCGTAAACAATAACCGCC 59.901 55.000 0.00 0.00 0.00 6.13
2453 4701 0.734309 CCCGTAAACAATAACCGCCC 59.266 55.000 0.00 0.00 0.00 6.13
2454 4702 1.679640 CCCGTAAACAATAACCGCCCT 60.680 52.381 0.00 0.00 0.00 5.19
2455 4703 1.399089 CCGTAAACAATAACCGCCCTG 59.601 52.381 0.00 0.00 0.00 4.45
2456 4704 2.348660 CGTAAACAATAACCGCCCTGA 58.651 47.619 0.00 0.00 0.00 3.86
2457 4705 2.940410 CGTAAACAATAACCGCCCTGAT 59.060 45.455 0.00 0.00 0.00 2.90
2458 4706 3.001939 CGTAAACAATAACCGCCCTGATC 59.998 47.826 0.00 0.00 0.00 2.92
2459 4707 2.799126 AACAATAACCGCCCTGATCA 57.201 45.000 0.00 0.00 0.00 2.92
2460 4708 2.332063 ACAATAACCGCCCTGATCAG 57.668 50.000 16.24 16.24 0.00 2.90
2461 4709 1.559682 ACAATAACCGCCCTGATCAGT 59.440 47.619 21.11 4.30 0.00 3.41
2462 4710 2.026262 ACAATAACCGCCCTGATCAGTT 60.026 45.455 21.11 11.61 0.00 3.16
2463 4711 2.332063 ATAACCGCCCTGATCAGTTG 57.668 50.000 21.11 12.76 0.00 3.16
2464 4712 0.981183 TAACCGCCCTGATCAGTTGT 59.019 50.000 21.11 9.46 0.00 3.32
2465 4713 0.110486 AACCGCCCTGATCAGTTGTT 59.890 50.000 21.11 14.32 0.00 2.83
2466 4714 0.606401 ACCGCCCTGATCAGTTGTTG 60.606 55.000 21.11 5.51 0.00 3.33
2467 4715 0.606401 CCGCCCTGATCAGTTGTTGT 60.606 55.000 21.11 0.00 0.00 3.32
2468 4716 0.798776 CGCCCTGATCAGTTGTTGTC 59.201 55.000 21.11 0.00 0.00 3.18
2469 4717 0.798776 GCCCTGATCAGTTGTTGTCG 59.201 55.000 21.11 3.37 0.00 4.35
2470 4718 1.878102 GCCCTGATCAGTTGTTGTCGT 60.878 52.381 21.11 0.00 0.00 4.34
2471 4719 1.800586 CCCTGATCAGTTGTTGTCGTG 59.199 52.381 21.11 1.95 0.00 4.35
2472 4720 2.547855 CCCTGATCAGTTGTTGTCGTGA 60.548 50.000 21.11 0.00 0.00 4.35
2473 4721 2.476619 CCTGATCAGTTGTTGTCGTGAC 59.523 50.000 21.11 0.00 0.00 3.67
2474 4722 3.384668 CTGATCAGTTGTTGTCGTGACT 58.615 45.455 14.95 0.00 0.00 3.41
2475 4723 3.123050 TGATCAGTTGTTGTCGTGACTG 58.877 45.455 0.00 0.00 40.56 3.51
2476 4724 1.934589 TCAGTTGTTGTCGTGACTGG 58.065 50.000 1.23 0.00 39.85 4.00
2477 4725 1.206132 TCAGTTGTTGTCGTGACTGGT 59.794 47.619 1.23 0.00 39.85 4.00
2478 4726 2.427812 TCAGTTGTTGTCGTGACTGGTA 59.572 45.455 1.23 0.00 39.85 3.25
2479 4727 3.119065 TCAGTTGTTGTCGTGACTGGTAA 60.119 43.478 1.23 0.00 39.85 2.85
2480 4728 3.619483 CAGTTGTTGTCGTGACTGGTAAA 59.381 43.478 1.23 0.00 36.68 2.01
2481 4729 4.093703 CAGTTGTTGTCGTGACTGGTAAAA 59.906 41.667 1.23 0.00 36.68 1.52
2482 4730 4.696402 AGTTGTTGTCGTGACTGGTAAAAA 59.304 37.500 1.23 0.00 0.00 1.94
2483 4731 4.603231 TGTTGTCGTGACTGGTAAAAAC 57.397 40.909 1.23 0.00 0.00 2.43
2484 4732 4.001652 TGTTGTCGTGACTGGTAAAAACA 58.998 39.130 1.23 0.00 0.00 2.83
2485 4733 4.636648 TGTTGTCGTGACTGGTAAAAACAT 59.363 37.500 1.23 0.00 0.00 2.71
2486 4734 5.816258 TGTTGTCGTGACTGGTAAAAACATA 59.184 36.000 1.23 0.00 0.00 2.29
2487 4735 6.315642 TGTTGTCGTGACTGGTAAAAACATAA 59.684 34.615 1.23 0.00 0.00 1.90
2488 4736 6.922247 TGTCGTGACTGGTAAAAACATAAA 57.078 33.333 1.23 0.00 0.00 1.40
2489 4737 6.950545 TGTCGTGACTGGTAAAAACATAAAG 58.049 36.000 1.23 0.00 0.00 1.85
2490 4738 5.849604 GTCGTGACTGGTAAAAACATAAAGC 59.150 40.000 0.00 0.00 0.00 3.51
2491 4739 4.843984 CGTGACTGGTAAAAACATAAAGCG 59.156 41.667 0.00 0.00 0.00 4.68
2492 4740 5.333492 CGTGACTGGTAAAAACATAAAGCGA 60.333 40.000 0.00 0.00 0.00 4.93
2493 4741 6.432107 GTGACTGGTAAAAACATAAAGCGAA 58.568 36.000 0.00 0.00 0.00 4.70
2494 4742 6.913673 GTGACTGGTAAAAACATAAAGCGAAA 59.086 34.615 0.00 0.00 0.00 3.46
2495 4743 6.913673 TGACTGGTAAAAACATAAAGCGAAAC 59.086 34.615 0.00 0.00 0.00 2.78
2496 4744 6.797454 ACTGGTAAAAACATAAAGCGAAACA 58.203 32.000 0.00 0.00 0.00 2.83
2497 4745 7.430441 ACTGGTAAAAACATAAAGCGAAACAT 58.570 30.769 0.00 0.00 0.00 2.71
2498 4746 7.381139 ACTGGTAAAAACATAAAGCGAAACATG 59.619 33.333 0.00 0.00 0.00 3.21
2499 4747 7.426410 TGGTAAAAACATAAAGCGAAACATGA 58.574 30.769 0.00 0.00 0.00 3.07
2500 4748 7.593273 TGGTAAAAACATAAAGCGAAACATGAG 59.407 33.333 0.00 0.00 0.00 2.90
2501 4749 6.452244 AAAAACATAAAGCGAAACATGAGC 57.548 33.333 0.00 0.00 0.00 4.26
2502 4750 5.376854 AAACATAAAGCGAAACATGAGCT 57.623 34.783 0.00 1.58 43.90 4.09
2503 4751 4.606457 ACATAAAGCGAAACATGAGCTC 57.394 40.909 6.82 6.82 40.78 4.09
2504 4752 4.256920 ACATAAAGCGAAACATGAGCTCT 58.743 39.130 16.19 0.00 40.78 4.09
2505 4753 4.093998 ACATAAAGCGAAACATGAGCTCTG 59.906 41.667 16.19 12.83 40.78 3.35
2506 4754 2.175878 AAGCGAAACATGAGCTCTGT 57.824 45.000 16.19 13.47 40.78 3.41
2507 4755 1.436600 AGCGAAACATGAGCTCTGTG 58.563 50.000 16.19 15.66 36.33 3.66
2508 4756 0.179205 GCGAAACATGAGCTCTGTGC 60.179 55.000 16.19 11.98 43.29 4.57
2517 4765 3.555428 GCTCTGTGCTGTTCGGAC 58.445 61.111 0.00 0.00 38.95 4.79
2518 4766 1.300931 GCTCTGTGCTGTTCGGACA 60.301 57.895 0.00 0.00 42.04 4.02
2527 4775 3.000815 TGTTCGGACAGAAAGTGGC 57.999 52.632 0.00 0.00 41.10 5.01
2528 4776 0.878523 TGTTCGGACAGAAAGTGGCG 60.879 55.000 0.00 0.00 41.10 5.69
2529 4777 0.878961 GTTCGGACAGAAAGTGGCGT 60.879 55.000 0.00 0.00 41.10 5.68
2530 4778 0.179067 TTCGGACAGAAAGTGGCGTT 60.179 50.000 0.00 0.00 33.17 4.84
2531 4779 0.179067 TCGGACAGAAAGTGGCGTTT 60.179 50.000 0.00 0.00 33.17 3.60
2532 4780 0.661020 CGGACAGAAAGTGGCGTTTT 59.339 50.000 0.00 0.00 33.17 2.43
2533 4781 1.064952 CGGACAGAAAGTGGCGTTTTT 59.935 47.619 0.00 0.00 33.17 1.94
2534 4782 2.727777 GGACAGAAAGTGGCGTTTTTC 58.272 47.619 1.39 1.39 33.17 2.29
2535 4783 2.543031 GGACAGAAAGTGGCGTTTTTCC 60.543 50.000 5.05 0.88 33.17 3.13
2536 4784 2.096248 ACAGAAAGTGGCGTTTTTCCA 58.904 42.857 5.05 0.00 34.60 3.53
2537 4785 2.693074 ACAGAAAGTGGCGTTTTTCCAT 59.307 40.909 5.05 0.00 35.81 3.41
2538 4786 3.243401 ACAGAAAGTGGCGTTTTTCCATC 60.243 43.478 5.05 0.00 35.81 3.51
2539 4787 2.955660 AGAAAGTGGCGTTTTTCCATCA 59.044 40.909 5.05 0.00 35.81 3.07
2540 4788 3.573967 AGAAAGTGGCGTTTTTCCATCAT 59.426 39.130 5.05 0.00 35.81 2.45
2541 4789 3.302365 AAGTGGCGTTTTTCCATCATG 57.698 42.857 0.00 0.00 35.81 3.07
2542 4790 2.513753 AGTGGCGTTTTTCCATCATGA 58.486 42.857 0.00 0.00 35.81 3.07
2543 4791 2.890311 AGTGGCGTTTTTCCATCATGAA 59.110 40.909 0.00 0.00 35.81 2.57
2544 4792 2.986479 GTGGCGTTTTTCCATCATGAAC 59.014 45.455 0.00 0.00 35.81 3.18
2545 4793 2.890311 TGGCGTTTTTCCATCATGAACT 59.110 40.909 0.00 0.00 0.00 3.01
2546 4794 3.320541 TGGCGTTTTTCCATCATGAACTT 59.679 39.130 0.00 0.00 0.00 2.66
2547 4795 4.520874 TGGCGTTTTTCCATCATGAACTTA 59.479 37.500 0.00 0.00 0.00 2.24
2548 4796 5.010112 TGGCGTTTTTCCATCATGAACTTAA 59.990 36.000 0.00 0.00 0.00 1.85
2549 4797 6.099341 GGCGTTTTTCCATCATGAACTTAAT 58.901 36.000 0.00 0.00 0.00 1.40
2550 4798 6.589907 GGCGTTTTTCCATCATGAACTTAATT 59.410 34.615 0.00 0.00 0.00 1.40
2551 4799 7.757624 GGCGTTTTTCCATCATGAACTTAATTA 59.242 33.333 0.00 0.00 0.00 1.40
2552 4800 9.134734 GCGTTTTTCCATCATGAACTTAATTAA 57.865 29.630 0.00 0.00 0.00 1.40
2557 4805 8.682128 TTCCATCATGAACTTAATTAAAACGC 57.318 30.769 0.00 0.00 0.00 4.84
2558 4806 8.050778 TCCATCATGAACTTAATTAAAACGCT 57.949 30.769 0.00 0.00 0.00 5.07
2559 4807 8.519526 TCCATCATGAACTTAATTAAAACGCTT 58.480 29.630 0.00 0.00 0.00 4.68
2560 4808 9.781834 CCATCATGAACTTAATTAAAACGCTTA 57.218 29.630 0.00 0.00 0.00 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 5.971202 GGGCACATCAAGTTTATACAAATCG 59.029 40.000 0.00 0.00 0.00 3.34
60 61 5.365314 TCAACATAGTATAGTGGGCACATCA 59.635 40.000 0.00 0.00 0.00 3.07
525 528 5.744171 TCCTAGTGCTTGCATTATTTCTGA 58.256 37.500 0.00 0.00 0.00 3.27
544 547 1.284785 CAGCCCAGGGTTCAAATCCTA 59.715 52.381 7.55 0.00 37.45 2.94
547 550 0.972471 CCCAGCCCAGGGTTCAAATC 60.972 60.000 7.55 0.00 44.24 2.17
560 563 0.398318 GGACAGTGATATCCCCAGCC 59.602 60.000 0.00 0.00 0.00 4.85
567 570 5.777732 AGATGGTTAGAGGGACAGTGATATC 59.222 44.000 0.00 0.00 0.00 1.63
568 571 5.721225 AGATGGTTAGAGGGACAGTGATAT 58.279 41.667 0.00 0.00 0.00 1.63
681 730 6.385759 TGGTTCCTAACACCATACTCATACAT 59.614 38.462 0.00 0.00 39.53 2.29
682 731 5.722441 TGGTTCCTAACACCATACTCATACA 59.278 40.000 0.00 0.00 39.53 2.29
690 739 7.125963 TGTGTATATGTGGTTCCTAACACCATA 59.874 37.037 0.00 0.00 46.19 2.74
726 775 7.984391 ACCAAATTCTTTTTCAAAAATCGCTT 58.016 26.923 0.00 0.00 0.00 4.68
758 810 4.262592 GCTCCATTTGACCACTTTCCATTT 60.263 41.667 0.00 0.00 0.00 2.32
759 811 3.259123 GCTCCATTTGACCACTTTCCATT 59.741 43.478 0.00 0.00 0.00 3.16
767 819 2.700773 GCCCGCTCCATTTGACCAC 61.701 63.158 0.00 0.00 0.00 4.16
785 837 2.360553 TGCCAATGGTTTTGCGTATG 57.639 45.000 0.00 0.00 0.00 2.39
1577 3155 1.750778 ACACAAGAACAACCAAGCCTG 59.249 47.619 0.00 0.00 0.00 4.85
1614 3192 1.074084 TGGGTCCCTAAATTCACGCAA 59.926 47.619 10.00 0.00 0.00 4.85
1699 3281 3.036075 TGCAATCGCCTCATCTCATAG 57.964 47.619 0.00 0.00 37.32 2.23
1803 4043 3.176480 CGCCGTCTAACGACTAATAAACG 59.824 47.826 0.24 0.00 46.05 3.60
1805 4045 3.108144 GCGCCGTCTAACGACTAATAAA 58.892 45.455 0.00 0.00 46.05 1.40
1812 4052 2.879462 CCAGCGCCGTCTAACGAC 60.879 66.667 2.29 0.00 46.05 4.34
1814 4054 0.526954 ATAACCAGCGCCGTCTAACG 60.527 55.000 2.29 0.00 42.11 3.18
1817 4057 0.179121 CACATAACCAGCGCCGTCTA 60.179 55.000 2.29 0.00 0.00 2.59
1818 4058 1.447838 CACATAACCAGCGCCGTCT 60.448 57.895 2.29 0.00 0.00 4.18
1819 4059 1.421410 CTCACATAACCAGCGCCGTC 61.421 60.000 2.29 0.00 0.00 4.79
1820 4060 1.447838 CTCACATAACCAGCGCCGT 60.448 57.895 2.29 0.00 0.00 5.68
1821 4061 2.173669 CCTCACATAACCAGCGCCG 61.174 63.158 2.29 0.00 0.00 6.46
1822 4062 1.819632 CCCTCACATAACCAGCGCC 60.820 63.158 2.29 0.00 0.00 6.53
1823 4063 2.472909 GCCCTCACATAACCAGCGC 61.473 63.158 0.00 0.00 0.00 5.92
1824 4064 1.078497 TGCCCTCACATAACCAGCG 60.078 57.895 0.00 0.00 0.00 5.18
1825 4065 0.749454 CCTGCCCTCACATAACCAGC 60.749 60.000 0.00 0.00 0.00 4.85
1826 4066 0.749454 GCCTGCCCTCACATAACCAG 60.749 60.000 0.00 0.00 0.00 4.00
1827 4067 1.302949 GCCTGCCCTCACATAACCA 59.697 57.895 0.00 0.00 0.00 3.67
1828 4068 1.453928 GGCCTGCCCTCACATAACC 60.454 63.158 0.00 0.00 0.00 2.85
1829 4069 0.749454 CAGGCCTGCCCTCACATAAC 60.749 60.000 22.33 0.00 44.09 1.89
1830 4070 1.609239 CAGGCCTGCCCTCACATAA 59.391 57.895 22.33 0.00 44.09 1.90
1831 4071 2.377810 CCAGGCCTGCCCTCACATA 61.378 63.158 28.39 0.00 44.09 2.29
1832 4072 3.736224 CCAGGCCTGCCCTCACAT 61.736 66.667 28.39 0.00 44.09 3.21
1845 4085 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
1846 4086 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
1847 4087 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
1848 4088 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
1849 4089 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
1850 4090 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
1851 4091 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
1857 4097 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
1858 4098 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
1859 4099 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
1860 4100 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
1861 4101 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
1862 4102 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
1863 4103 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
1874 4114 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
1875 4115 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
1876 4116 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
1877 4117 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
1878 4118 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
1879 4119 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
1880 4120 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
1881 4121 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
1882 4122 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
1883 4123 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
1892 4132 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
1893 4133 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
1894 4134 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
1895 4135 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
1896 4136 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
1897 4137 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
1898 4138 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
1899 4139 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
1901 4141 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
1902 4142 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
1903 4143 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
1904 4144 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
1915 4155 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
1916 4156 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
1917 4157 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
1918 4158 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
1919 4159 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
1920 4160 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
1921 4161 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
1922 4162 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
1923 4163 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
1924 4164 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
1925 4165 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
1926 4166 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
1927 4167 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
1928 4168 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
1929 4169 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
1930 4170 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
1931 4171 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
1932 4172 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
1933 4173 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
1934 4174 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
1935 4175 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
1936 4176 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
1937 4177 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
1938 4178 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
1939 4179 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
1940 4180 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
1941 4181 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
1942 4182 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
1943 4183 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
1944 4184 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
1945 4185 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
1946 4186 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
1947 4187 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
1948 4188 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
1950 4190 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
1951 4191 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
1952 4192 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
1953 4193 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
1954 4194 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
1955 4195 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
1956 4196 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
1964 4204 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
1965 4205 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
1966 4206 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
1967 4207 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
1968 4208 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
1969 4209 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
1970 4210 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
1971 4211 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
1972 4212 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
1973 4213 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
1974 4214 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
1975 4215 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
1976 4216 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
1977 4217 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
1978 4218 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
1979 4219 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
1980 4220 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
1981 4221 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
1982 4222 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
1983 4223 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
1984 4224 1.347707 CTAAAGGACAGACCCAGTGCA 59.652 52.381 0.00 0.00 40.05 4.57
1985 4225 1.623811 TCTAAAGGACAGACCCAGTGC 59.376 52.381 0.00 0.00 40.05 4.40
1986 4226 2.352814 CGTCTAAAGGACAGACCCAGTG 60.353 54.545 0.00 0.00 44.70 3.66
1987 4227 1.893801 CGTCTAAAGGACAGACCCAGT 59.106 52.381 0.00 0.00 44.70 4.00
1988 4228 1.204941 CCGTCTAAAGGACAGACCCAG 59.795 57.143 0.00 0.00 44.70 4.45
1989 4229 1.263356 CCGTCTAAAGGACAGACCCA 58.737 55.000 0.00 0.00 44.70 4.51
1990 4230 0.108281 GCCGTCTAAAGGACAGACCC 60.108 60.000 0.00 0.00 44.70 4.46
1991 4231 0.458025 CGCCGTCTAAAGGACAGACC 60.458 60.000 0.00 0.00 44.70 3.85
1992 4232 1.077089 GCGCCGTCTAAAGGACAGAC 61.077 60.000 0.00 0.00 44.70 3.51
1993 4233 1.214589 GCGCCGTCTAAAGGACAGA 59.785 57.895 0.00 0.00 44.70 3.41
1994 4234 1.078759 CAGCGCCGTCTAAAGGACAG 61.079 60.000 2.29 0.00 44.70 3.51
1995 4235 1.080093 CAGCGCCGTCTAAAGGACA 60.080 57.895 2.29 0.00 44.70 4.02
1996 4236 1.810030 CCAGCGCCGTCTAAAGGAC 60.810 63.158 2.29 0.00 41.28 3.85
1997 4237 1.823169 AACCAGCGCCGTCTAAAGGA 61.823 55.000 2.29 0.00 0.00 3.36
1998 4238 0.108520 TAACCAGCGCCGTCTAAAGG 60.109 55.000 2.29 0.00 0.00 3.11
1999 4239 1.593006 CATAACCAGCGCCGTCTAAAG 59.407 52.381 2.29 0.00 0.00 1.85
2000 4240 1.066716 ACATAACCAGCGCCGTCTAAA 60.067 47.619 2.29 0.00 0.00 1.85
2001 4241 0.533491 ACATAACCAGCGCCGTCTAA 59.467 50.000 2.29 0.00 0.00 2.10
2002 4242 0.179121 CACATAACCAGCGCCGTCTA 60.179 55.000 2.29 0.00 0.00 2.59
2003 4243 1.447838 CACATAACCAGCGCCGTCT 60.448 57.895 2.29 0.00 0.00 4.18
2004 4244 1.693083 GACACATAACCAGCGCCGTC 61.693 60.000 2.29 0.00 0.00 4.79
2005 4245 1.740296 GACACATAACCAGCGCCGT 60.740 57.895 2.29 0.00 0.00 5.68
2009 4249 6.092944 TGGTTTATTAAGACACATAACCAGCG 59.907 38.462 0.00 0.00 0.00 5.18
2045 4285 2.225117 ACCAGTTCATCCCCAAAAGAGG 60.225 50.000 0.00 0.00 0.00 3.69
2046 4286 3.160679 ACCAGTTCATCCCCAAAAGAG 57.839 47.619 0.00 0.00 0.00 2.85
2047 4287 3.611025 AACCAGTTCATCCCCAAAAGA 57.389 42.857 0.00 0.00 0.00 2.52
2048 4288 6.014669 TCAATTAACCAGTTCATCCCCAAAAG 60.015 38.462 0.00 0.00 0.00 2.27
2049 4289 5.841237 TCAATTAACCAGTTCATCCCCAAAA 59.159 36.000 0.00 0.00 0.00 2.44
2050 4290 5.398236 TCAATTAACCAGTTCATCCCCAAA 58.602 37.500 0.00 0.00 0.00 3.28
2051 4291 5.004361 TCAATTAACCAGTTCATCCCCAA 57.996 39.130 0.00 0.00 0.00 4.12
2053 4293 5.261216 TCTTCAATTAACCAGTTCATCCCC 58.739 41.667 0.00 0.00 0.00 4.81
2054 4294 6.434340 ACTTCTTCAATTAACCAGTTCATCCC 59.566 38.462 0.00 0.00 0.00 3.85
2055 4295 7.454260 ACTTCTTCAATTAACCAGTTCATCC 57.546 36.000 0.00 0.00 0.00 3.51
2062 4302 7.592938 TGCAACATACTTCTTCAATTAACCAG 58.407 34.615 0.00 0.00 0.00 4.00
2141 4387 4.261155 GCAACAGCATAAGACAACACTTGA 60.261 41.667 0.00 0.00 0.00 3.02
2173 4420 7.437713 TGAATGATAGTCCAGGTAAGTCAAT 57.562 36.000 0.00 0.00 0.00 2.57
2188 4435 5.374921 AGCATTCCTGTCCTTGAATGATAG 58.625 41.667 14.51 0.00 46.89 2.08
2194 4441 6.916360 AATAAAAGCATTCCTGTCCTTGAA 57.084 33.333 0.00 0.00 0.00 2.69
2230 4478 1.908065 AAACAAAAGAGTGCGTGTGC 58.092 45.000 0.00 0.00 43.20 4.57
2231 4479 3.241701 ACAAAACAAAAGAGTGCGTGTG 58.758 40.909 0.00 0.00 0.00 3.82
2232 4480 3.569250 ACAAAACAAAAGAGTGCGTGT 57.431 38.095 0.00 0.00 0.00 4.49
2233 4481 4.621034 AGAAACAAAACAAAAGAGTGCGTG 59.379 37.500 0.00 0.00 0.00 5.34
2234 4482 4.805219 AGAAACAAAACAAAAGAGTGCGT 58.195 34.783 0.00 0.00 0.00 5.24
2235 4483 5.344665 TCAAGAAACAAAACAAAAGAGTGCG 59.655 36.000 0.00 0.00 0.00 5.34
2236 4484 6.183360 CCTCAAGAAACAAAACAAAAGAGTGC 60.183 38.462 0.00 0.00 0.00 4.40
2237 4485 6.183360 GCCTCAAGAAACAAAACAAAAGAGTG 60.183 38.462 0.00 0.00 0.00 3.51
2238 4486 5.869344 GCCTCAAGAAACAAAACAAAAGAGT 59.131 36.000 0.00 0.00 0.00 3.24
2239 4487 6.101997 AGCCTCAAGAAACAAAACAAAAGAG 58.898 36.000 0.00 0.00 0.00 2.85
2240 4488 6.036577 AGCCTCAAGAAACAAAACAAAAGA 57.963 33.333 0.00 0.00 0.00 2.52
2242 4490 6.036577 AGAGCCTCAAGAAACAAAACAAAA 57.963 33.333 0.00 0.00 0.00 2.44
2243 4491 5.418840 AGAGAGCCTCAAGAAACAAAACAAA 59.581 36.000 0.00 0.00 32.06 2.83
2245 4493 4.336433 CAGAGAGCCTCAAGAAACAAAACA 59.664 41.667 0.00 0.00 32.06 2.83
2246 4494 4.336713 ACAGAGAGCCTCAAGAAACAAAAC 59.663 41.667 0.00 0.00 32.06 2.43
2262 4510 3.111838 CGCACAGCACTATTACAGAGAG 58.888 50.000 0.00 0.00 0.00 3.20
2263 4511 2.752903 TCGCACAGCACTATTACAGAGA 59.247 45.455 0.00 0.00 0.00 3.10
2271 4519 3.056821 TGAAGTAGTTCGCACAGCACTAT 60.057 43.478 5.84 0.00 35.17 2.12
2274 4522 1.457303 CTGAAGTAGTTCGCACAGCAC 59.543 52.381 5.84 0.00 35.17 4.40
2288 4536 2.225066 ACGGAGGGAGTACTTCTGAAGT 60.225 50.000 24.80 24.80 45.40 3.01
2289 4537 2.424246 GACGGAGGGAGTACTTCTGAAG 59.576 54.545 15.59 15.59 0.00 3.02
2290 4538 2.444421 GACGGAGGGAGTACTTCTGAA 58.556 52.381 8.56 0.00 0.00 3.02
2291 4539 1.340795 GGACGGAGGGAGTACTTCTGA 60.341 57.143 8.56 0.00 0.00 3.27
2292 4540 1.104630 GGACGGAGGGAGTACTTCTG 58.895 60.000 0.01 0.62 0.00 3.02
2293 4541 0.033306 GGGACGGAGGGAGTACTTCT 60.033 60.000 0.01 0.06 0.00 2.85
2294 4542 2.502633 GGGACGGAGGGAGTACTTC 58.497 63.158 0.00 0.00 0.00 3.01
2295 4543 4.781264 GGGACGGAGGGAGTACTT 57.219 61.111 0.00 0.00 0.00 2.24
2308 4556 4.614946 ACAACGCTCTTATATTACGGGAC 58.385 43.478 0.00 0.00 0.00 4.46
2309 4557 4.924305 ACAACGCTCTTATATTACGGGA 57.076 40.909 0.00 0.00 0.00 5.14
2310 4558 6.476380 TGTTAACAACGCTCTTATATTACGGG 59.524 38.462 5.64 0.00 0.00 5.28
2311 4559 7.332530 GTGTTAACAACGCTCTTATATTACGG 58.667 38.462 10.51 0.00 38.81 4.02
2325 4573 3.477090 CAGCGTTTTCAGTGTTAACAACG 59.523 43.478 19.02 19.02 39.91 4.10
2326 4574 4.408694 ACAGCGTTTTCAGTGTTAACAAC 58.591 39.130 10.51 2.78 0.00 3.32
2327 4575 4.688511 ACAGCGTTTTCAGTGTTAACAA 57.311 36.364 10.51 0.00 0.00 2.83
2328 4576 4.688511 AACAGCGTTTTCAGTGTTAACA 57.311 36.364 3.59 3.59 31.37 2.41
2329 4577 6.196571 ACATAACAGCGTTTTCAGTGTTAAC 58.803 36.000 0.00 0.00 38.51 2.01
2330 4578 6.366315 ACATAACAGCGTTTTCAGTGTTAA 57.634 33.333 0.00 0.00 38.51 2.01
2331 4579 5.994887 ACATAACAGCGTTTTCAGTGTTA 57.005 34.783 0.00 0.00 39.16 2.41
2332 4580 4.893424 ACATAACAGCGTTTTCAGTGTT 57.107 36.364 0.00 0.00 37.00 3.32
2333 4581 4.893424 AACATAACAGCGTTTTCAGTGT 57.107 36.364 0.00 0.00 0.00 3.55
2334 4582 5.794945 CCATAACATAACAGCGTTTTCAGTG 59.205 40.000 0.00 0.00 0.00 3.66
2335 4583 5.106317 CCCATAACATAACAGCGTTTTCAGT 60.106 40.000 0.00 0.00 0.00 3.41
2336 4584 5.106317 ACCCATAACATAACAGCGTTTTCAG 60.106 40.000 0.00 0.00 0.00 3.02
2337 4585 4.762765 ACCCATAACATAACAGCGTTTTCA 59.237 37.500 0.00 0.00 0.00 2.69
2338 4586 5.305139 ACCCATAACATAACAGCGTTTTC 57.695 39.130 0.00 0.00 0.00 2.29
2339 4587 4.142773 CGACCCATAACATAACAGCGTTTT 60.143 41.667 0.00 0.00 0.00 2.43
2340 4588 3.372822 CGACCCATAACATAACAGCGTTT 59.627 43.478 0.00 0.00 0.00 3.60
2341 4589 2.933906 CGACCCATAACATAACAGCGTT 59.066 45.455 0.02 0.02 0.00 4.84
2342 4590 2.546778 CGACCCATAACATAACAGCGT 58.453 47.619 0.00 0.00 0.00 5.07
2343 4591 1.864711 CCGACCCATAACATAACAGCG 59.135 52.381 0.00 0.00 0.00 5.18
2344 4592 3.131396 CTCCGACCCATAACATAACAGC 58.869 50.000 0.00 0.00 0.00 4.40
2345 4593 3.494398 CCCTCCGACCCATAACATAACAG 60.494 52.174 0.00 0.00 0.00 3.16
2346 4594 2.436542 CCCTCCGACCCATAACATAACA 59.563 50.000 0.00 0.00 0.00 2.41
2347 4595 2.701951 TCCCTCCGACCCATAACATAAC 59.298 50.000 0.00 0.00 0.00 1.89
2348 4596 2.969950 CTCCCTCCGACCCATAACATAA 59.030 50.000 0.00 0.00 0.00 1.90
2349 4597 2.090943 ACTCCCTCCGACCCATAACATA 60.091 50.000 0.00 0.00 0.00 2.29
2350 4598 1.344087 ACTCCCTCCGACCCATAACAT 60.344 52.381 0.00 0.00 0.00 2.71
2351 4599 0.042131 ACTCCCTCCGACCCATAACA 59.958 55.000 0.00 0.00 0.00 2.41
2352 4600 1.962100 CTACTCCCTCCGACCCATAAC 59.038 57.143 0.00 0.00 0.00 1.89
2353 4601 1.854939 TCTACTCCCTCCGACCCATAA 59.145 52.381 0.00 0.00 0.00 1.90
2354 4602 1.526315 TCTACTCCCTCCGACCCATA 58.474 55.000 0.00 0.00 0.00 2.74
2355 4603 0.861155 ATCTACTCCCTCCGACCCAT 59.139 55.000 0.00 0.00 0.00 4.00
2356 4604 0.106167 CATCTACTCCCTCCGACCCA 60.106 60.000 0.00 0.00 0.00 4.51
2357 4605 0.106116 ACATCTACTCCCTCCGACCC 60.106 60.000 0.00 0.00 0.00 4.46
2358 4606 1.777941 AACATCTACTCCCTCCGACC 58.222 55.000 0.00 0.00 0.00 4.79
2359 4607 3.194968 TGAAAACATCTACTCCCTCCGAC 59.805 47.826 0.00 0.00 0.00 4.79
2360 4608 3.194968 GTGAAAACATCTACTCCCTCCGA 59.805 47.826 0.00 0.00 0.00 4.55
2361 4609 3.056107 TGTGAAAACATCTACTCCCTCCG 60.056 47.826 0.00 0.00 0.00 4.63
2362 4610 4.553330 TGTGAAAACATCTACTCCCTCC 57.447 45.455 0.00 0.00 0.00 4.30
2363 4611 5.734720 TCATGTGAAAACATCTACTCCCTC 58.265 41.667 0.00 0.00 0.00 4.30
2364 4612 5.485353 TCTCATGTGAAAACATCTACTCCCT 59.515 40.000 0.00 0.00 0.00 4.20
2365 4613 5.582665 GTCTCATGTGAAAACATCTACTCCC 59.417 44.000 0.00 0.00 0.00 4.30
2366 4614 6.402222 AGTCTCATGTGAAAACATCTACTCC 58.598 40.000 0.00 0.00 0.00 3.85
2367 4615 8.247562 ACTAGTCTCATGTGAAAACATCTACTC 58.752 37.037 0.00 0.00 0.00 2.59
2368 4616 8.031864 CACTAGTCTCATGTGAAAACATCTACT 58.968 37.037 0.00 0.00 33.95 2.57
2369 4617 8.029522 TCACTAGTCTCATGTGAAAACATCTAC 58.970 37.037 0.00 0.00 37.71 2.59
2370 4618 8.122472 TCACTAGTCTCATGTGAAAACATCTA 57.878 34.615 0.00 0.00 37.71 1.98
2371 4619 6.997655 TCACTAGTCTCATGTGAAAACATCT 58.002 36.000 0.00 0.00 37.71 2.90
2372 4620 6.183360 GCTCACTAGTCTCATGTGAAAACATC 60.183 42.308 0.00 0.00 39.74 3.06
2373 4621 5.641209 GCTCACTAGTCTCATGTGAAAACAT 59.359 40.000 0.00 0.00 39.74 2.71
2374 4622 4.991056 GCTCACTAGTCTCATGTGAAAACA 59.009 41.667 0.00 0.00 39.74 2.83
2375 4623 4.390297 GGCTCACTAGTCTCATGTGAAAAC 59.610 45.833 0.00 0.00 39.74 2.43
2376 4624 4.284490 AGGCTCACTAGTCTCATGTGAAAA 59.716 41.667 0.00 0.00 39.74 2.29
2377 4625 3.834813 AGGCTCACTAGTCTCATGTGAAA 59.165 43.478 0.00 0.00 39.74 2.69
2378 4626 3.435275 AGGCTCACTAGTCTCATGTGAA 58.565 45.455 0.00 0.00 39.74 3.18
2379 4627 3.093057 AGGCTCACTAGTCTCATGTGA 57.907 47.619 0.00 0.00 29.18 3.58
2380 4628 3.883830 AAGGCTCACTAGTCTCATGTG 57.116 47.619 0.00 0.00 36.37 3.21
2381 4629 3.055530 CCAAAGGCTCACTAGTCTCATGT 60.056 47.826 0.00 0.00 36.37 3.21
2382 4630 3.196469 TCCAAAGGCTCACTAGTCTCATG 59.804 47.826 0.00 0.00 36.37 3.07
2383 4631 3.445008 TCCAAAGGCTCACTAGTCTCAT 58.555 45.455 0.00 0.00 36.37 2.90
2384 4632 2.889512 TCCAAAGGCTCACTAGTCTCA 58.110 47.619 0.00 0.00 36.37 3.27
2385 4633 3.196685 ACATCCAAAGGCTCACTAGTCTC 59.803 47.826 0.00 0.00 36.37 3.36
2386 4634 3.177228 ACATCCAAAGGCTCACTAGTCT 58.823 45.455 0.00 0.00 40.22 3.24
2387 4635 3.618690 ACATCCAAAGGCTCACTAGTC 57.381 47.619 0.00 0.00 0.00 2.59
2388 4636 3.838317 TGTACATCCAAAGGCTCACTAGT 59.162 43.478 0.00 0.00 0.00 2.57
2389 4637 4.471904 TGTACATCCAAAGGCTCACTAG 57.528 45.455 0.00 0.00 0.00 2.57
2390 4638 6.553953 TTATGTACATCCAAAGGCTCACTA 57.446 37.500 12.68 0.00 0.00 2.74
2391 4639 5.435686 TTATGTACATCCAAAGGCTCACT 57.564 39.130 12.68 0.00 0.00 3.41
2392 4640 5.590259 ACATTATGTACATCCAAAGGCTCAC 59.410 40.000 12.68 0.00 0.00 3.51
2393 4641 5.754782 ACATTATGTACATCCAAAGGCTCA 58.245 37.500 12.68 0.00 0.00 4.26
2394 4642 6.095440 ACAACATTATGTACATCCAAAGGCTC 59.905 38.462 12.68 0.00 0.00 4.70
2395 4643 5.951747 ACAACATTATGTACATCCAAAGGCT 59.048 36.000 12.68 0.00 0.00 4.58
2396 4644 6.127758 TGACAACATTATGTACATCCAAAGGC 60.128 38.462 12.68 2.47 32.57 4.35
2397 4645 7.336679 TCTGACAACATTATGTACATCCAAAGG 59.663 37.037 12.68 5.80 32.57 3.11
2398 4646 8.267620 TCTGACAACATTATGTACATCCAAAG 57.732 34.615 12.68 1.84 32.57 2.77
2399 4647 8.628630 TTCTGACAACATTATGTACATCCAAA 57.371 30.769 12.68 1.40 32.57 3.28
2400 4648 7.882791 ACTTCTGACAACATTATGTACATCCAA 59.117 33.333 12.68 2.22 32.57 3.53
2401 4649 7.394016 ACTTCTGACAACATTATGTACATCCA 58.606 34.615 12.68 0.38 32.57 3.41
2402 4650 7.849804 ACTTCTGACAACATTATGTACATCC 57.150 36.000 12.68 0.00 32.57 3.51
2405 4653 9.990360 TTCTAACTTCTGACAACATTATGTACA 57.010 29.630 0.00 0.00 32.57 2.90
2408 4656 8.454106 GCATTCTAACTTCTGACAACATTATGT 58.546 33.333 0.00 0.00 35.90 2.29
2409 4657 7.912250 GGCATTCTAACTTCTGACAACATTATG 59.088 37.037 0.00 0.00 0.00 1.90
2410 4658 7.067494 GGGCATTCTAACTTCTGACAACATTAT 59.933 37.037 0.00 0.00 0.00 1.28
2411 4659 6.374333 GGGCATTCTAACTTCTGACAACATTA 59.626 38.462 0.00 0.00 0.00 1.90
2412 4660 5.183904 GGGCATTCTAACTTCTGACAACATT 59.816 40.000 0.00 0.00 0.00 2.71
2413 4661 4.702131 GGGCATTCTAACTTCTGACAACAT 59.298 41.667 0.00 0.00 0.00 2.71
2414 4662 4.072131 GGGCATTCTAACTTCTGACAACA 58.928 43.478 0.00 0.00 0.00 3.33
2415 4663 3.125316 CGGGCATTCTAACTTCTGACAAC 59.875 47.826 0.00 0.00 0.00 3.32
2416 4664 3.244422 ACGGGCATTCTAACTTCTGACAA 60.244 43.478 0.00 0.00 0.00 3.18
2417 4665 2.301870 ACGGGCATTCTAACTTCTGACA 59.698 45.455 0.00 0.00 0.00 3.58
2418 4666 2.973945 ACGGGCATTCTAACTTCTGAC 58.026 47.619 0.00 0.00 0.00 3.51
2419 4667 4.811969 TTACGGGCATTCTAACTTCTGA 57.188 40.909 0.00 0.00 0.00 3.27
2420 4668 4.693566 TGTTTACGGGCATTCTAACTTCTG 59.306 41.667 0.00 0.00 0.00 3.02
2421 4669 4.901868 TGTTTACGGGCATTCTAACTTCT 58.098 39.130 0.00 0.00 0.00 2.85
2422 4670 5.616488 TTGTTTACGGGCATTCTAACTTC 57.384 39.130 0.00 0.00 0.00 3.01
2423 4671 7.362315 GGTTATTGTTTACGGGCATTCTAACTT 60.362 37.037 0.00 0.00 0.00 2.66
2424 4672 6.094464 GGTTATTGTTTACGGGCATTCTAACT 59.906 38.462 0.00 0.00 0.00 2.24
2425 4673 6.260377 GGTTATTGTTTACGGGCATTCTAAC 58.740 40.000 0.00 0.00 0.00 2.34
2426 4674 5.064962 CGGTTATTGTTTACGGGCATTCTAA 59.935 40.000 0.00 0.00 0.00 2.10
2427 4675 4.571580 CGGTTATTGTTTACGGGCATTCTA 59.428 41.667 0.00 0.00 0.00 2.10
2428 4676 3.375922 CGGTTATTGTTTACGGGCATTCT 59.624 43.478 0.00 0.00 0.00 2.40
2429 4677 3.687200 CGGTTATTGTTTACGGGCATTC 58.313 45.455 0.00 0.00 0.00 2.67
2430 4678 2.159352 GCGGTTATTGTTTACGGGCATT 60.159 45.455 0.00 0.00 0.00 3.56
2431 4679 1.402613 GCGGTTATTGTTTACGGGCAT 59.597 47.619 0.00 0.00 0.00 4.40
2432 4680 0.803740 GCGGTTATTGTTTACGGGCA 59.196 50.000 0.00 0.00 0.00 5.36
2433 4681 0.099259 GGCGGTTATTGTTTACGGGC 59.901 55.000 0.00 0.00 34.14 6.13
2434 4682 0.734309 GGGCGGTTATTGTTTACGGG 59.266 55.000 0.00 0.00 0.00 5.28
2435 4683 1.399089 CAGGGCGGTTATTGTTTACGG 59.601 52.381 0.00 0.00 0.00 4.02
2436 4684 2.348660 TCAGGGCGGTTATTGTTTACG 58.651 47.619 0.00 0.00 0.00 3.18
2437 4685 3.942748 TGATCAGGGCGGTTATTGTTTAC 59.057 43.478 0.00 0.00 0.00 2.01
2438 4686 4.196193 CTGATCAGGGCGGTTATTGTTTA 58.804 43.478 15.38 0.00 0.00 2.01
2439 4687 3.016736 CTGATCAGGGCGGTTATTGTTT 58.983 45.455 15.38 0.00 0.00 2.83
2440 4688 2.026262 ACTGATCAGGGCGGTTATTGTT 60.026 45.455 26.08 0.00 0.00 2.83
2441 4689 1.559682 ACTGATCAGGGCGGTTATTGT 59.440 47.619 26.08 0.00 0.00 2.71
2442 4690 2.332063 ACTGATCAGGGCGGTTATTG 57.668 50.000 26.08 0.00 0.00 1.90
2443 4691 2.026262 ACAACTGATCAGGGCGGTTATT 60.026 45.455 26.08 6.41 33.32 1.40
2444 4692 1.559682 ACAACTGATCAGGGCGGTTAT 59.440 47.619 26.08 0.00 33.32 1.89
2445 4693 0.981183 ACAACTGATCAGGGCGGTTA 59.019 50.000 26.08 0.00 33.32 2.85
2446 4694 0.110486 AACAACTGATCAGGGCGGTT 59.890 50.000 26.08 19.12 35.33 4.44
2447 4695 0.606401 CAACAACTGATCAGGGCGGT 60.606 55.000 26.08 14.78 0.00 5.68
2448 4696 0.606401 ACAACAACTGATCAGGGCGG 60.606 55.000 26.08 14.18 0.00 6.13
2449 4697 0.798776 GACAACAACTGATCAGGGCG 59.201 55.000 26.08 15.68 0.00 6.13
2450 4698 0.798776 CGACAACAACTGATCAGGGC 59.201 55.000 26.08 9.53 0.00 5.19
2451 4699 1.800586 CACGACAACAACTGATCAGGG 59.199 52.381 26.08 19.20 0.00 4.45
2452 4700 2.476619 GTCACGACAACAACTGATCAGG 59.523 50.000 26.08 12.13 0.00 3.86
2453 4701 3.183172 CAGTCACGACAACAACTGATCAG 59.817 47.826 21.37 21.37 41.26 2.90
2454 4702 3.123050 CAGTCACGACAACAACTGATCA 58.877 45.455 0.00 0.00 41.26 2.92
2455 4703 2.476619 CCAGTCACGACAACAACTGATC 59.523 50.000 3.06 0.00 41.26 2.92
2456 4704 2.158957 ACCAGTCACGACAACAACTGAT 60.159 45.455 3.06 0.00 41.26 2.90
2457 4705 1.206132 ACCAGTCACGACAACAACTGA 59.794 47.619 3.06 0.00 41.26 3.41
2458 4706 1.651987 ACCAGTCACGACAACAACTG 58.348 50.000 0.00 0.00 39.04 3.16
2459 4707 3.530265 TTACCAGTCACGACAACAACT 57.470 42.857 0.00 0.00 0.00 3.16
2460 4708 4.603231 TTTTACCAGTCACGACAACAAC 57.397 40.909 0.00 0.00 0.00 3.32
2461 4709 4.454847 TGTTTTTACCAGTCACGACAACAA 59.545 37.500 0.00 0.00 0.00 2.83
2462 4710 4.001652 TGTTTTTACCAGTCACGACAACA 58.998 39.130 0.00 0.00 0.00 3.33
2463 4711 4.603231 TGTTTTTACCAGTCACGACAAC 57.397 40.909 0.00 0.00 0.00 3.32
2464 4712 6.922247 TTATGTTTTTACCAGTCACGACAA 57.078 33.333 0.00 0.00 0.00 3.18
2465 4713 6.512091 GCTTTATGTTTTTACCAGTCACGACA 60.512 38.462 0.00 0.00 0.00 4.35
2466 4714 5.849604 GCTTTATGTTTTTACCAGTCACGAC 59.150 40.000 0.00 0.00 0.00 4.34
2467 4715 5.333492 CGCTTTATGTTTTTACCAGTCACGA 60.333 40.000 0.00 0.00 0.00 4.35
2468 4716 4.843984 CGCTTTATGTTTTTACCAGTCACG 59.156 41.667 0.00 0.00 0.00 4.35
2469 4717 5.992729 TCGCTTTATGTTTTTACCAGTCAC 58.007 37.500 0.00 0.00 0.00 3.67
2470 4718 6.621316 TTCGCTTTATGTTTTTACCAGTCA 57.379 33.333 0.00 0.00 0.00 3.41
2471 4719 6.913673 TGTTTCGCTTTATGTTTTTACCAGTC 59.086 34.615 0.00 0.00 0.00 3.51
2472 4720 6.797454 TGTTTCGCTTTATGTTTTTACCAGT 58.203 32.000 0.00 0.00 0.00 4.00
2473 4721 7.593273 TCATGTTTCGCTTTATGTTTTTACCAG 59.407 33.333 0.00 0.00 0.00 4.00
2474 4722 7.426410 TCATGTTTCGCTTTATGTTTTTACCA 58.574 30.769 0.00 0.00 0.00 3.25
2475 4723 7.410407 GCTCATGTTTCGCTTTATGTTTTTACC 60.410 37.037 0.00 0.00 0.00 2.85
2476 4724 7.326063 AGCTCATGTTTCGCTTTATGTTTTTAC 59.674 33.333 0.00 0.00 0.00 2.01
2477 4725 7.367285 AGCTCATGTTTCGCTTTATGTTTTTA 58.633 30.769 0.00 0.00 0.00 1.52
2478 4726 6.215845 AGCTCATGTTTCGCTTTATGTTTTT 58.784 32.000 0.00 0.00 0.00 1.94
2479 4727 5.772521 AGCTCATGTTTCGCTTTATGTTTT 58.227 33.333 0.00 0.00 0.00 2.43
2480 4728 5.182001 AGAGCTCATGTTTCGCTTTATGTTT 59.818 36.000 17.77 0.00 33.47 2.83
2481 4729 4.697352 AGAGCTCATGTTTCGCTTTATGTT 59.303 37.500 17.77 0.00 33.47 2.71
2482 4730 4.093998 CAGAGCTCATGTTTCGCTTTATGT 59.906 41.667 17.77 0.00 33.47 2.29
2483 4731 4.093998 ACAGAGCTCATGTTTCGCTTTATG 59.906 41.667 17.77 2.31 33.47 1.90
2484 4732 4.093998 CACAGAGCTCATGTTTCGCTTTAT 59.906 41.667 17.77 0.00 33.47 1.40
2485 4733 3.433274 CACAGAGCTCATGTTTCGCTTTA 59.567 43.478 17.77 0.00 33.47 1.85
2486 4734 2.225019 CACAGAGCTCATGTTTCGCTTT 59.775 45.455 17.77 0.00 33.47 3.51
2487 4735 1.802960 CACAGAGCTCATGTTTCGCTT 59.197 47.619 17.77 0.00 33.47 4.68
2488 4736 1.436600 CACAGAGCTCATGTTTCGCT 58.563 50.000 17.77 0.00 36.57 4.93
2489 4737 0.179205 GCACAGAGCTCATGTTTCGC 60.179 55.000 17.77 12.52 41.15 4.70
2490 4738 3.963622 GCACAGAGCTCATGTTTCG 57.036 52.632 17.77 7.04 41.15 3.46
2500 4748 1.287730 CTGTCCGAACAGCACAGAGC 61.288 60.000 0.00 0.00 46.01 4.09
2501 4749 2.819667 CTGTCCGAACAGCACAGAG 58.180 57.895 0.00 0.00 46.01 3.35
2509 4757 0.878523 CGCCACTTTCTGTCCGAACA 60.879 55.000 0.00 0.00 0.00 3.18
2510 4758 0.878961 ACGCCACTTTCTGTCCGAAC 60.879 55.000 0.00 0.00 0.00 3.95
2511 4759 0.179067 AACGCCACTTTCTGTCCGAA 60.179 50.000 0.00 0.00 0.00 4.30
2512 4760 0.179067 AAACGCCACTTTCTGTCCGA 60.179 50.000 0.00 0.00 0.00 4.55
2513 4761 0.661020 AAAACGCCACTTTCTGTCCG 59.339 50.000 0.00 0.00 0.00 4.79
2514 4762 2.543031 GGAAAAACGCCACTTTCTGTCC 60.543 50.000 0.00 0.00 33.06 4.02
2515 4763 2.098443 TGGAAAAACGCCACTTTCTGTC 59.902 45.455 0.00 0.00 33.06 3.51
2516 4764 2.096248 TGGAAAAACGCCACTTTCTGT 58.904 42.857 0.00 0.00 33.06 3.41
2517 4765 2.861462 TGGAAAAACGCCACTTTCTG 57.139 45.000 0.00 0.00 33.06 3.02
2518 4766 2.955660 TGATGGAAAAACGCCACTTTCT 59.044 40.909 0.00 0.00 38.44 2.52
2519 4767 3.363341 TGATGGAAAAACGCCACTTTC 57.637 42.857 0.00 0.00 38.44 2.62
2520 4768 3.320541 TCATGATGGAAAAACGCCACTTT 59.679 39.130 0.00 0.00 38.44 2.66
2521 4769 2.890311 TCATGATGGAAAAACGCCACTT 59.110 40.909 0.00 0.00 38.44 3.16
2522 4770 2.513753 TCATGATGGAAAAACGCCACT 58.486 42.857 0.00 0.00 38.44 4.00
2523 4771 2.986479 GTTCATGATGGAAAAACGCCAC 59.014 45.455 0.00 0.00 38.44 5.01
2524 4772 2.890311 AGTTCATGATGGAAAAACGCCA 59.110 40.909 0.00 0.00 40.24 5.69
2525 4773 3.575965 AGTTCATGATGGAAAAACGCC 57.424 42.857 0.00 0.00 0.00 5.68
2526 4774 7.581011 AATTAAGTTCATGATGGAAAAACGC 57.419 32.000 0.00 0.00 0.00 4.84
2531 4779 9.134734 GCGTTTTAATTAAGTTCATGATGGAAA 57.865 29.630 0.00 0.00 0.00 3.13
2532 4780 8.519526 AGCGTTTTAATTAAGTTCATGATGGAA 58.480 29.630 0.00 0.00 0.00 3.53
2533 4781 8.050778 AGCGTTTTAATTAAGTTCATGATGGA 57.949 30.769 0.00 0.00 0.00 3.41
2534 4782 8.687824 AAGCGTTTTAATTAAGTTCATGATGG 57.312 30.769 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.