Multiple sequence alignment - TraesCS2A01G112800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G112800 chr2A 100.000 4992 0 0 1 4992 63794195 63799186 0.000000e+00 9219.0
1 TraesCS2A01G112800 chr2B 91.008 2013 121 24 2997 4992 98305931 98307900 0.000000e+00 2660.0
2 TraesCS2A01G112800 chr2B 81.212 1980 177 101 185 2033 98303012 98304927 0.000000e+00 1415.0
3 TraesCS2A01G112800 chr2B 89.975 798 51 18 2195 2979 98304981 98305762 0.000000e+00 1003.0
4 TraesCS2A01G112800 chr2B 88.136 59 4 3 1 58 30235657 30235713 3.230000e-07 67.6
5 TraesCS2A01G112800 chr2D 90.679 1341 79 20 3010 4340 62614075 62615379 0.000000e+00 1742.0
6 TraesCS2A01G112800 chr2D 88.338 1089 53 24 185 1212 62611175 62612250 0.000000e+00 1240.0
7 TraesCS2A01G112800 chr2D 91.608 715 49 8 2195 2908 62613073 62613777 0.000000e+00 977.0
8 TraesCS2A01G112800 chr2D 91.667 672 43 7 4327 4992 62617358 62618022 0.000000e+00 918.0
9 TraesCS2A01G112800 chr2D 81.399 629 57 33 1424 2033 62612409 62612996 4.550000e-125 459.0
10 TraesCS2A01G112800 chr1A 92.806 139 9 1 1 139 30541753 30541616 3.050000e-47 200.0
11 TraesCS2A01G112800 chr1A 93.750 64 4 0 124 187 30541312 30541249 4.110000e-16 97.1
12 TraesCS2A01G112800 chr5A 88.136 59 4 3 1 58 135765593 135765537 3.230000e-07 67.6
13 TraesCS2A01G112800 chr4B 88.136 59 4 3 1 58 619420881 619420937 3.230000e-07 67.6
14 TraesCS2A01G112800 chr3B 78.846 104 18 3 9 110 193413844 193413743 3.230000e-07 67.6
15 TraesCS2A01G112800 chr3B 88.136 59 4 3 1 58 736432426 736432482 3.230000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G112800 chr2A 63794195 63799186 4991 False 9219.000000 9219 100.000000 1 4992 1 chr2A.!!$F1 4991
1 TraesCS2A01G112800 chr2B 98303012 98307900 4888 False 1692.666667 2660 87.398333 185 4992 3 chr2B.!!$F2 4807
2 TraesCS2A01G112800 chr2D 62611175 62618022 6847 False 1067.200000 1742 88.738200 185 4992 5 chr2D.!!$F1 4807

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
45 46 0.034863 GGCCCCAACGGTCAGATAAA 60.035 55.0 0.0 0.0 35.67 1.40 F
1359 1498 0.036388 TTCTGAATGAGGTCCGTGCC 60.036 55.0 0.0 0.0 0.00 5.01 F
2158 2353 0.180406 GGCCCACATCCAACGACTAT 59.820 55.0 0.0 0.0 0.00 2.12 F
2762 2972 0.038892 CATGTGGTTCAGCAACAGGC 60.039 55.0 0.0 0.0 45.30 4.85 F
3432 3879 0.166597 CGCAACACCAGCATACACTG 59.833 55.0 0.0 0.0 37.42 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1735 1919 0.108424 CGGGAGAAGCTTGGTGAGAG 60.108 60.0 2.10 0.00 0.00 3.20 R
2635 2845 0.173708 CGAGAAGGGACGGGAAGAAG 59.826 60.0 0.00 0.00 0.00 2.85 R
3412 3859 0.034756 AGTGTATGCTGGTGTTGCGA 59.965 50.0 0.00 0.00 0.00 5.10 R
3931 4387 0.038526 CCTTAGCCAGACGAACACGT 60.039 55.0 0.00 0.00 43.06 4.49 R
4842 7305 0.878523 TTCTCGGCCGTCAACAACTG 60.879 55.0 27.15 5.41 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.356278 GCCATTGTCAGGCCCTGA 59.644 61.111 10.05 10.05 46.50 3.86
42 43 3.728373 GGGCCCCAACGGTCAGAT 61.728 66.667 12.23 0.00 38.37 2.90
43 44 2.372074 GGGCCCCAACGGTCAGATA 61.372 63.158 12.23 0.00 38.37 1.98
44 45 1.605453 GGCCCCAACGGTCAGATAA 59.395 57.895 0.00 0.00 35.67 1.75
45 46 0.034863 GGCCCCAACGGTCAGATAAA 60.035 55.000 0.00 0.00 35.67 1.40
46 47 1.614850 GGCCCCAACGGTCAGATAAAA 60.615 52.381 0.00 0.00 35.67 1.52
47 48 1.471287 GCCCCAACGGTCAGATAAAAC 59.529 52.381 0.00 0.00 0.00 2.43
48 49 1.735571 CCCCAACGGTCAGATAAAACG 59.264 52.381 0.00 0.00 0.00 3.60
49 50 2.419667 CCCAACGGTCAGATAAAACGT 58.580 47.619 0.00 0.00 39.74 3.99
50 51 2.414138 CCCAACGGTCAGATAAAACGTC 59.586 50.000 0.00 0.00 36.69 4.34
51 52 3.061322 CCAACGGTCAGATAAAACGTCA 58.939 45.455 0.00 0.00 36.69 4.35
52 53 3.495377 CCAACGGTCAGATAAAACGTCAA 59.505 43.478 0.00 0.00 36.69 3.18
53 54 4.153475 CCAACGGTCAGATAAAACGTCAAT 59.847 41.667 0.00 0.00 36.69 2.57
54 55 5.349270 CCAACGGTCAGATAAAACGTCAATA 59.651 40.000 0.00 0.00 36.69 1.90
55 56 6.238508 CAACGGTCAGATAAAACGTCAATAC 58.761 40.000 0.00 0.00 36.69 1.89
80 81 9.444600 ACGTTGTTATACATGATTTAGACCTTT 57.555 29.630 0.00 0.00 0.00 3.11
87 88 8.986477 ATACATGATTTAGACCTTTTTGCAAC 57.014 30.769 0.00 0.00 0.00 4.17
88 89 6.815089 ACATGATTTAGACCTTTTTGCAACA 58.185 32.000 0.00 0.00 0.00 3.33
89 90 6.701400 ACATGATTTAGACCTTTTTGCAACAC 59.299 34.615 0.00 0.00 0.00 3.32
90 91 6.463995 TGATTTAGACCTTTTTGCAACACT 57.536 33.333 0.00 0.00 0.00 3.55
91 92 6.872920 TGATTTAGACCTTTTTGCAACACTT 58.127 32.000 0.00 0.00 0.00 3.16
92 93 8.001881 TGATTTAGACCTTTTTGCAACACTTA 57.998 30.769 0.00 0.00 0.00 2.24
93 94 8.134895 TGATTTAGACCTTTTTGCAACACTTAG 58.865 33.333 0.00 0.00 0.00 2.18
94 95 7.633193 TTTAGACCTTTTTGCAACACTTAGA 57.367 32.000 0.00 0.00 0.00 2.10
95 96 5.500645 AGACCTTTTTGCAACACTTAGAC 57.499 39.130 0.00 0.00 0.00 2.59
96 97 4.338400 AGACCTTTTTGCAACACTTAGACC 59.662 41.667 0.00 0.00 0.00 3.85
97 98 3.383505 ACCTTTTTGCAACACTTAGACCC 59.616 43.478 0.00 0.00 0.00 4.46
98 99 3.243737 CCTTTTTGCAACACTTAGACCCC 60.244 47.826 0.00 0.00 0.00 4.95
99 100 2.738587 TTTGCAACACTTAGACCCCA 57.261 45.000 0.00 0.00 0.00 4.96
100 101 2.738587 TTGCAACACTTAGACCCCAA 57.261 45.000 0.00 0.00 0.00 4.12
101 102 2.738587 TGCAACACTTAGACCCCAAA 57.261 45.000 0.00 0.00 0.00 3.28
102 103 3.019799 TGCAACACTTAGACCCCAAAA 57.980 42.857 0.00 0.00 0.00 2.44
103 104 3.571590 TGCAACACTTAGACCCCAAAAT 58.428 40.909 0.00 0.00 0.00 1.82
104 105 3.320541 TGCAACACTTAGACCCCAAAATG 59.679 43.478 0.00 0.00 0.00 2.32
105 106 3.572255 GCAACACTTAGACCCCAAAATGA 59.428 43.478 0.00 0.00 0.00 2.57
106 107 4.220602 GCAACACTTAGACCCCAAAATGAT 59.779 41.667 0.00 0.00 0.00 2.45
107 108 5.417580 GCAACACTTAGACCCCAAAATGATA 59.582 40.000 0.00 0.00 0.00 2.15
108 109 6.625081 GCAACACTTAGACCCCAAAATGATAC 60.625 42.308 0.00 0.00 0.00 2.24
109 110 6.388619 ACACTTAGACCCCAAAATGATACT 57.611 37.500 0.00 0.00 0.00 2.12
110 111 6.180472 ACACTTAGACCCCAAAATGATACTG 58.820 40.000 0.00 0.00 0.00 2.74
111 112 6.012858 ACACTTAGACCCCAAAATGATACTGA 60.013 38.462 0.00 0.00 0.00 3.41
112 113 6.884295 CACTTAGACCCCAAAATGATACTGAA 59.116 38.462 0.00 0.00 0.00 3.02
113 114 7.557719 CACTTAGACCCCAAAATGATACTGAAT 59.442 37.037 0.00 0.00 0.00 2.57
114 115 8.116026 ACTTAGACCCCAAAATGATACTGAATT 58.884 33.333 0.00 0.00 0.00 2.17
115 116 6.780457 AGACCCCAAAATGATACTGAATTG 57.220 37.500 0.00 0.00 0.00 2.32
116 117 5.127682 AGACCCCAAAATGATACTGAATTGC 59.872 40.000 0.00 0.00 0.00 3.56
117 118 4.142182 ACCCCAAAATGATACTGAATTGCG 60.142 41.667 0.00 0.00 0.00 4.85
118 119 4.097741 CCCCAAAATGATACTGAATTGCGA 59.902 41.667 0.00 0.00 0.00 5.10
119 120 5.036737 CCCAAAATGATACTGAATTGCGAC 58.963 41.667 0.00 0.00 0.00 5.19
120 121 5.036737 CCAAAATGATACTGAATTGCGACC 58.963 41.667 0.00 0.00 0.00 4.79
121 122 5.392919 CCAAAATGATACTGAATTGCGACCA 60.393 40.000 0.00 0.00 0.00 4.02
122 123 5.895636 AAATGATACTGAATTGCGACCAA 57.104 34.783 0.00 0.00 35.01 3.67
123 124 4.882671 ATGATACTGAATTGCGACCAAC 57.117 40.909 0.00 0.00 32.95 3.77
124 125 3.669536 TGATACTGAATTGCGACCAACA 58.330 40.909 0.00 0.00 32.95 3.33
125 126 3.435327 TGATACTGAATTGCGACCAACAC 59.565 43.478 0.00 0.00 32.95 3.32
126 127 0.586319 ACTGAATTGCGACCAACACG 59.414 50.000 0.00 0.00 32.95 4.49
127 128 0.865111 CTGAATTGCGACCAACACGA 59.135 50.000 0.00 0.00 32.95 4.35
128 129 1.464608 CTGAATTGCGACCAACACGAT 59.535 47.619 0.00 0.00 32.95 3.73
129 130 1.876799 TGAATTGCGACCAACACGATT 59.123 42.857 0.00 0.00 32.95 3.34
130 131 3.067833 TGAATTGCGACCAACACGATTA 58.932 40.909 0.00 0.00 32.95 1.75
131 132 3.124466 TGAATTGCGACCAACACGATTAG 59.876 43.478 0.00 0.00 32.95 1.73
132 133 2.157834 TTGCGACCAACACGATTAGT 57.842 45.000 0.00 0.00 0.00 2.24
147 148 6.915544 ACGATTAGTGATACTGACTCGTAA 57.084 37.500 11.07 0.00 36.71 3.18
148 149 6.713520 ACGATTAGTGATACTGACTCGTAAC 58.286 40.000 11.07 0.00 36.71 2.50
149 150 6.314648 ACGATTAGTGATACTGACTCGTAACA 59.685 38.462 11.07 0.00 36.71 2.41
150 151 7.012138 ACGATTAGTGATACTGACTCGTAACAT 59.988 37.037 11.07 0.00 36.71 2.71
151 152 7.321509 CGATTAGTGATACTGACTCGTAACATG 59.678 40.741 0.00 0.00 0.00 3.21
152 153 7.619964 TTAGTGATACTGACTCGTAACATGA 57.380 36.000 0.00 0.00 0.00 3.07
153 154 6.701145 AGTGATACTGACTCGTAACATGAT 57.299 37.500 0.00 0.00 0.00 2.45
154 155 6.499172 AGTGATACTGACTCGTAACATGATG 58.501 40.000 0.00 0.00 0.00 3.07
155 156 5.174035 GTGATACTGACTCGTAACATGATGC 59.826 44.000 0.00 0.00 0.00 3.91
156 157 2.893637 ACTGACTCGTAACATGATGCC 58.106 47.619 0.00 0.00 0.00 4.40
157 158 1.854743 CTGACTCGTAACATGATGCCG 59.145 52.381 0.00 0.00 0.00 5.69
158 159 1.474879 TGACTCGTAACATGATGCCGA 59.525 47.619 0.00 0.00 0.00 5.54
159 160 2.094442 TGACTCGTAACATGATGCCGAA 60.094 45.455 0.00 0.00 0.00 4.30
160 161 2.535984 GACTCGTAACATGATGCCGAAG 59.464 50.000 0.00 0.00 0.00 3.79
161 162 2.094182 ACTCGTAACATGATGCCGAAGT 60.094 45.455 0.00 0.00 0.00 3.01
162 163 2.267426 TCGTAACATGATGCCGAAGTG 58.733 47.619 0.00 0.00 0.00 3.16
163 164 1.999735 CGTAACATGATGCCGAAGTGT 59.000 47.619 0.00 0.00 0.00 3.55
164 165 2.222796 CGTAACATGATGCCGAAGTGTG 60.223 50.000 0.00 0.00 0.00 3.82
165 166 1.167851 AACATGATGCCGAAGTGTGG 58.832 50.000 0.00 0.00 0.00 4.17
166 167 0.036732 ACATGATGCCGAAGTGTGGT 59.963 50.000 0.00 0.00 0.00 4.16
167 168 1.277842 ACATGATGCCGAAGTGTGGTA 59.722 47.619 0.00 0.00 0.00 3.25
168 169 1.935873 CATGATGCCGAAGTGTGGTAG 59.064 52.381 0.00 0.00 0.00 3.18
169 170 0.391130 TGATGCCGAAGTGTGGTAGC 60.391 55.000 0.00 0.00 0.00 3.58
170 171 0.108138 GATGCCGAAGTGTGGTAGCT 60.108 55.000 0.00 0.00 0.00 3.32
171 172 0.324943 ATGCCGAAGTGTGGTAGCTT 59.675 50.000 0.00 0.00 0.00 3.74
172 173 0.320421 TGCCGAAGTGTGGTAGCTTC 60.320 55.000 0.00 0.00 38.11 3.86
173 174 1.019805 GCCGAAGTGTGGTAGCTTCC 61.020 60.000 1.68 1.68 38.20 3.46
174 175 0.608640 CCGAAGTGTGGTAGCTTCCT 59.391 55.000 11.05 0.00 38.20 3.36
175 176 1.673033 CCGAAGTGTGGTAGCTTCCTG 60.673 57.143 11.05 0.00 38.20 3.86
176 177 1.443802 GAAGTGTGGTAGCTTCCTGC 58.556 55.000 11.05 4.47 43.29 4.85
177 178 0.764890 AAGTGTGGTAGCTTCCTGCA 59.235 50.000 11.05 6.99 45.94 4.41
178 179 0.764890 AGTGTGGTAGCTTCCTGCAA 59.235 50.000 11.05 0.00 45.94 4.08
179 180 1.352352 AGTGTGGTAGCTTCCTGCAAT 59.648 47.619 11.05 6.33 45.94 3.56
180 181 2.162681 GTGTGGTAGCTTCCTGCAATT 58.837 47.619 11.05 0.00 45.94 2.32
181 182 3.009033 AGTGTGGTAGCTTCCTGCAATTA 59.991 43.478 11.05 0.00 45.94 1.40
182 183 3.756434 GTGTGGTAGCTTCCTGCAATTAA 59.244 43.478 11.05 0.00 45.94 1.40
183 184 3.756434 TGTGGTAGCTTCCTGCAATTAAC 59.244 43.478 11.05 0.00 45.94 2.01
229 230 1.752498 ACGTAACATCAGGGCGTATCA 59.248 47.619 0.00 0.00 33.85 2.15
250 252 2.102578 TCTTCTCGATGGATGCAGACA 58.897 47.619 0.00 0.00 0.00 3.41
296 298 3.421844 GTCCAGGTTTATGTTTGAGCCT 58.578 45.455 0.00 0.00 0.00 4.58
338 353 2.046285 GGACAGGATTGCAACCGGG 61.046 63.158 6.32 13.34 0.00 5.73
462 526 4.561530 GCCATATCCTGATTCTCGTTAGCA 60.562 45.833 0.00 0.00 0.00 3.49
512 579 1.154836 GACACGAAGCAAACGAGCG 60.155 57.895 0.00 0.00 40.15 5.03
601 673 2.461637 CTCCCTTTCCCCTCCCCT 59.538 66.667 0.00 0.00 0.00 4.79
602 674 1.694525 CTCCCTTTCCCCTCCCCTC 60.695 68.421 0.00 0.00 0.00 4.30
603 675 2.127297 CCCTTTCCCCTCCCCTCA 59.873 66.667 0.00 0.00 0.00 3.86
606 678 2.204244 TTTCCCCTCCCCTCACCC 60.204 66.667 0.00 0.00 0.00 4.61
717 796 0.695347 CTCAAGCTTTCCTCCCACCT 59.305 55.000 0.00 0.00 0.00 4.00
718 797 0.693049 TCAAGCTTTCCTCCCACCTC 59.307 55.000 0.00 0.00 0.00 3.85
846 929 1.074752 CTGCCTCTTTCTCGTGCTTC 58.925 55.000 0.00 0.00 0.00 3.86
863 946 0.679640 TTCATCCACCATCCAACGCC 60.680 55.000 0.00 0.00 0.00 5.68
887 970 2.103094 CAGCAATAATCCCCGTCTCTGA 59.897 50.000 0.00 0.00 0.00 3.27
917 1000 2.438434 CCATTTCTTCCGCGGCCT 60.438 61.111 23.51 0.00 0.00 5.19
951 1048 6.605471 GGAATCCTTCCTTGTTATTTTGGT 57.395 37.500 0.00 0.00 46.57 3.67
1042 1154 2.023414 GACGTACATGCGGGGGATCA 62.023 60.000 0.00 0.00 35.98 2.92
1043 1155 1.300931 CGTACATGCGGGGGATCAG 60.301 63.158 0.00 0.00 0.00 2.90
1044 1156 1.071471 GTACATGCGGGGGATCAGG 59.929 63.158 0.00 0.00 0.00 3.86
1150 1262 4.265056 ACAAAACCGGCGCCTCCT 62.265 61.111 26.68 4.84 0.00 3.69
1151 1263 3.431725 CAAAACCGGCGCCTCCTC 61.432 66.667 26.68 0.00 0.00 3.71
1216 1337 3.313690 CATTGCTCCGGTAAACAAAACC 58.686 45.455 0.00 0.00 0.00 3.27
1219 1340 1.334329 GCTCCGGTAAACAAAACCACG 60.334 52.381 0.00 0.00 36.78 4.94
1221 1342 1.939255 TCCGGTAAACAAAACCACGAC 59.061 47.619 0.00 0.00 36.78 4.34
1223 1344 1.333081 CGGTAAACAAAACCACGACCG 60.333 52.381 0.00 0.00 41.96 4.79
1224 1345 1.597690 GGTAAACAAAACCACGACCGC 60.598 52.381 0.00 0.00 36.96 5.68
1225 1346 1.331447 GTAAACAAAACCACGACCGCT 59.669 47.619 0.00 0.00 0.00 5.52
1229 1350 0.041312 CAAAACCACGACCGCTCTTG 60.041 55.000 0.00 0.00 0.00 3.02
1231 1352 0.878961 AAACCACGACCGCTCTTGTC 60.879 55.000 0.00 0.00 0.00 3.18
1236 1357 1.179814 ACGACCGCTCTTGTCTCCTT 61.180 55.000 0.00 0.00 0.00 3.36
1237 1358 0.456995 CGACCGCTCTTGTCTCCTTC 60.457 60.000 0.00 0.00 0.00 3.46
1238 1359 0.603569 GACCGCTCTTGTCTCCTTCA 59.396 55.000 0.00 0.00 0.00 3.02
1239 1360 1.205893 GACCGCTCTTGTCTCCTTCAT 59.794 52.381 0.00 0.00 0.00 2.57
1241 1362 1.472376 CCGCTCTTGTCTCCTTCATCC 60.472 57.143 0.00 0.00 0.00 3.51
1243 1364 2.690497 CGCTCTTGTCTCCTTCATCCTA 59.310 50.000 0.00 0.00 0.00 2.94
1244 1365 3.320541 CGCTCTTGTCTCCTTCATCCTAT 59.679 47.826 0.00 0.00 0.00 2.57
1246 1367 4.588528 GCTCTTGTCTCCTTCATCCTATCT 59.411 45.833 0.00 0.00 0.00 1.98
1247 1368 5.278957 GCTCTTGTCTCCTTCATCCTATCTC 60.279 48.000 0.00 0.00 0.00 2.75
1249 1370 6.068010 TCTTGTCTCCTTCATCCTATCTCTC 58.932 44.000 0.00 0.00 0.00 3.20
1251 1372 5.384336 TGTCTCCTTCATCCTATCTCTCTG 58.616 45.833 0.00 0.00 0.00 3.35
1253 1374 5.833131 GTCTCCTTCATCCTATCTCTCTGTT 59.167 44.000 0.00 0.00 0.00 3.16
1255 1376 6.549364 TCTCCTTCATCCTATCTCTCTGTTTC 59.451 42.308 0.00 0.00 0.00 2.78
1257 1378 6.900186 TCCTTCATCCTATCTCTCTGTTTCTT 59.100 38.462 0.00 0.00 0.00 2.52
1258 1379 6.985645 CCTTCATCCTATCTCTCTGTTTCTTG 59.014 42.308 0.00 0.00 0.00 3.02
1259 1380 7.364585 CCTTCATCCTATCTCTCTGTTTCTTGT 60.365 40.741 0.00 0.00 0.00 3.16
1260 1381 7.487822 TCATCCTATCTCTCTGTTTCTTGTT 57.512 36.000 0.00 0.00 0.00 2.83
1261 1382 7.551585 TCATCCTATCTCTCTGTTTCTTGTTC 58.448 38.462 0.00 0.00 0.00 3.18
1262 1383 7.398618 TCATCCTATCTCTCTGTTTCTTGTTCT 59.601 37.037 0.00 0.00 0.00 3.01
1263 1384 7.546250 TCCTATCTCTCTGTTTCTTGTTCTT 57.454 36.000 0.00 0.00 0.00 2.52
1264 1385 7.382110 TCCTATCTCTCTGTTTCTTGTTCTTG 58.618 38.462 0.00 0.00 0.00 3.02
1265 1386 7.233553 TCCTATCTCTCTGTTTCTTGTTCTTGA 59.766 37.037 0.00 0.00 0.00 3.02
1276 1400 8.477256 TGTTTCTTGTTCTTGATTGATTTCCTT 58.523 29.630 0.00 0.00 0.00 3.36
1277 1401 9.317936 GTTTCTTGTTCTTGATTGATTTCCTTT 57.682 29.630 0.00 0.00 0.00 3.11
1278 1402 8.876275 TTCTTGTTCTTGATTGATTTCCTTTG 57.124 30.769 0.00 0.00 0.00 2.77
1281 1405 6.437928 TGTTCTTGATTGATTTCCTTTGACG 58.562 36.000 0.00 0.00 0.00 4.35
1324 1449 2.960129 CGCGTGCTATCCGGGAAC 60.960 66.667 0.00 0.00 40.27 3.62
1325 1450 2.185867 GCGTGCTATCCGGGAACA 59.814 61.111 0.00 0.00 0.00 3.18
1347 1486 5.304357 ACATTTCCCGGTTTTCTTTCTGAAT 59.696 36.000 0.00 0.00 34.24 2.57
1348 1487 4.846779 TTCCCGGTTTTCTTTCTGAATG 57.153 40.909 0.00 0.00 34.24 2.67
1350 1489 4.072131 TCCCGGTTTTCTTTCTGAATGAG 58.928 43.478 0.00 0.00 34.24 2.90
1351 1490 3.191371 CCCGGTTTTCTTTCTGAATGAGG 59.809 47.826 0.00 4.48 34.24 3.86
1355 1494 4.083271 GGTTTTCTTTCTGAATGAGGTCCG 60.083 45.833 6.17 0.00 34.24 4.79
1356 1495 4.351874 TTTCTTTCTGAATGAGGTCCGT 57.648 40.909 6.17 0.00 34.24 4.69
1357 1496 3.319137 TCTTTCTGAATGAGGTCCGTG 57.681 47.619 2.19 0.00 0.00 4.94
1358 1497 1.734465 CTTTCTGAATGAGGTCCGTGC 59.266 52.381 0.00 0.00 0.00 5.34
1359 1498 0.036388 TTCTGAATGAGGTCCGTGCC 60.036 55.000 0.00 0.00 0.00 5.01
1360 1499 0.904865 TCTGAATGAGGTCCGTGCCT 60.905 55.000 0.00 0.00 42.53 4.75
1384 1523 0.326927 GGTGGATTCTTTCCCGGTGA 59.673 55.000 0.00 0.00 44.77 4.02
1456 1631 7.821846 TCTTCTTCTTCTTCTTTCTGAATAGGC 59.178 37.037 0.00 0.00 33.71 3.93
1461 1636 2.691409 TCTTTCTGAATAGGCCCGTG 57.309 50.000 0.00 0.00 0.00 4.94
1484 1659 1.148498 GGATTCCCCCTACGGCAAG 59.852 63.158 0.00 0.00 0.00 4.01
1507 1682 4.188247 TGACAAACCTAGAAGATGACCG 57.812 45.455 0.00 0.00 0.00 4.79
1512 1687 1.115467 CCTAGAAGATGACCGGCACT 58.885 55.000 0.00 0.00 0.00 4.40
1621 1800 1.375523 CGGTTGCACCTACACCCTC 60.376 63.158 0.00 0.00 35.66 4.30
1649 1828 3.621715 GGTATTCTTTCTACAAGGCGGTG 59.378 47.826 0.00 0.00 0.00 4.94
1687 1870 4.888326 AACCACATGCACATTTTACCAT 57.112 36.364 0.00 0.00 0.00 3.55
1696 1879 3.258123 GCACATTTTACCATGTCCACCTT 59.742 43.478 0.00 0.00 35.03 3.50
1698 1881 5.469479 CACATTTTACCATGTCCACCTTTC 58.531 41.667 0.00 0.00 35.03 2.62
1699 1882 5.010516 CACATTTTACCATGTCCACCTTTCA 59.989 40.000 0.00 0.00 35.03 2.69
1700 1883 5.779771 ACATTTTACCATGTCCACCTTTCAT 59.220 36.000 0.00 0.00 31.26 2.57
1701 1884 5.975693 TTTTACCATGTCCACCTTTCATC 57.024 39.130 0.00 0.00 0.00 2.92
1704 1887 2.644299 ACCATGTCCACCTTTCATCTCA 59.356 45.455 0.00 0.00 0.00 3.27
1705 1888 3.074390 ACCATGTCCACCTTTCATCTCAA 59.926 43.478 0.00 0.00 0.00 3.02
1706 1889 4.264083 ACCATGTCCACCTTTCATCTCAAT 60.264 41.667 0.00 0.00 0.00 2.57
1707 1890 4.708421 CCATGTCCACCTTTCATCTCAATT 59.292 41.667 0.00 0.00 0.00 2.32
1708 1891 5.887598 CCATGTCCACCTTTCATCTCAATTA 59.112 40.000 0.00 0.00 0.00 1.40
1709 1892 6.183360 CCATGTCCACCTTTCATCTCAATTAC 60.183 42.308 0.00 0.00 0.00 1.89
1711 1894 4.332819 GTCCACCTTTCATCTCAATTACCG 59.667 45.833 0.00 0.00 0.00 4.02
1712 1895 3.627577 CCACCTTTCATCTCAATTACCGG 59.372 47.826 0.00 0.00 0.00 5.28
1713 1896 3.065371 CACCTTTCATCTCAATTACCGGC 59.935 47.826 0.00 0.00 0.00 6.13
1716 1899 2.620251 TCATCTCAATTACCGGCCTG 57.380 50.000 0.00 0.00 0.00 4.85
1717 1900 0.947244 CATCTCAATTACCGGCCTGC 59.053 55.000 0.00 0.00 0.00 4.85
1719 1902 1.491668 TCTCAATTACCGGCCTGCTA 58.508 50.000 0.00 0.00 0.00 3.49
1724 1907 1.789523 ATTACCGGCCTGCTAGAGAA 58.210 50.000 0.00 0.00 0.00 2.87
1757 1941 1.376037 CACCAAGCTTCTCCCGGAC 60.376 63.158 0.73 0.00 0.00 4.79
1767 1951 1.640917 TCTCCCGGACTATTATGGGC 58.359 55.000 0.73 0.00 41.65 5.36
1782 1967 1.687563 TGGGCAGAGATGCATCAATG 58.312 50.000 27.81 23.87 36.33 2.82
1783 1968 0.959553 GGGCAGAGATGCATCAATGG 59.040 55.000 27.81 14.89 36.33 3.16
1786 1971 1.880675 GCAGAGATGCATCAATGGAGG 59.119 52.381 27.81 10.95 34.41 4.30
1807 1992 3.808726 GGCAATCAAAGCAACAAATGTGA 59.191 39.130 0.00 0.00 0.00 3.58
1850 2035 2.785857 ACCCAGGATCCCCTAGATTTTG 59.214 50.000 8.55 0.00 42.02 2.44
1855 2043 5.360999 CCAGGATCCCCTAGATTTTGTTTTC 59.639 44.000 8.55 0.00 42.02 2.29
1877 2065 8.463930 TTTCAAAATACATATCCTCACCATCC 57.536 34.615 0.00 0.00 0.00 3.51
1878 2066 6.542821 TCAAAATACATATCCTCACCATCCC 58.457 40.000 0.00 0.00 0.00 3.85
1911 2099 4.759693 TCGTGTTGCCATTTTTCTGTAGAT 59.240 37.500 0.00 0.00 0.00 1.98
1929 2124 9.403583 TCTGTAGATAAAAGAAAAGGTGTTGTT 57.596 29.630 0.00 0.00 0.00 2.83
1944 2139 7.360113 AGGTGTTGTTACCATGAAGAAATTT 57.640 32.000 0.00 0.00 43.37 1.82
1948 2143 9.191995 GTGTTGTTACCATGAAGAAATTTTAGG 57.808 33.333 0.00 0.00 0.00 2.69
1952 2147 5.921962 ACCATGAAGAAATTTTAGGCTCC 57.078 39.130 0.00 0.00 0.00 4.70
2013 2208 7.953158 TGCTTGCATATTCTACTATCAGTTC 57.047 36.000 0.00 0.00 0.00 3.01
2014 2209 7.500141 TGCTTGCATATTCTACTATCAGTTCA 58.500 34.615 0.00 0.00 0.00 3.18
2015 2210 7.654923 TGCTTGCATATTCTACTATCAGTTCAG 59.345 37.037 0.00 0.00 0.00 3.02
2016 2211 7.869937 GCTTGCATATTCTACTATCAGTTCAGA 59.130 37.037 0.00 0.00 0.00 3.27
2017 2212 9.755804 CTTGCATATTCTACTATCAGTTCAGAA 57.244 33.333 0.00 0.00 30.15 3.02
2026 2221 9.698309 TCTACTATCAGTTCAGAAAACAAAGAG 57.302 33.333 0.00 0.00 0.00 2.85
2027 2222 9.698309 CTACTATCAGTTCAGAAAACAAAGAGA 57.302 33.333 0.00 0.00 0.00 3.10
2033 2228 9.396022 TCAGTTCAGAAAACAAAGAGATAAACT 57.604 29.630 0.00 0.00 0.00 2.66
2070 2265 9.971922 AAAAGGAAAACAAGACATAAATCAGAG 57.028 29.630 0.00 0.00 0.00 3.35
2071 2266 8.697507 AAGGAAAACAAGACATAAATCAGAGT 57.302 30.769 0.00 0.00 0.00 3.24
2072 2267 8.103948 AGGAAAACAAGACATAAATCAGAGTG 57.896 34.615 0.00 0.00 0.00 3.51
2073 2268 6.803807 GGAAAACAAGACATAAATCAGAGTGC 59.196 38.462 0.00 0.00 0.00 4.40
2074 2269 7.308830 GGAAAACAAGACATAAATCAGAGTGCT 60.309 37.037 0.00 0.00 0.00 4.40
2075 2270 7.516198 AAACAAGACATAAATCAGAGTGCTT 57.484 32.000 0.00 0.00 0.00 3.91
2076 2271 8.621532 AAACAAGACATAAATCAGAGTGCTTA 57.378 30.769 0.00 0.00 0.00 3.09
2077 2272 8.621532 AACAAGACATAAATCAGAGTGCTTAA 57.378 30.769 0.00 0.00 0.00 1.85
2078 2273 8.621532 ACAAGACATAAATCAGAGTGCTTAAA 57.378 30.769 0.00 0.00 0.00 1.52
2079 2274 9.236006 ACAAGACATAAATCAGAGTGCTTAAAT 57.764 29.630 0.00 0.00 0.00 1.40
2082 2277 8.897752 AGACATAAATCAGAGTGCTTAAATTCC 58.102 33.333 0.00 0.00 0.00 3.01
2083 2278 7.697691 ACATAAATCAGAGTGCTTAAATTCCG 58.302 34.615 0.00 0.00 0.00 4.30
2084 2279 4.622701 AATCAGAGTGCTTAAATTCCGC 57.377 40.909 0.00 0.00 0.00 5.54
2085 2280 2.356135 TCAGAGTGCTTAAATTCCGCC 58.644 47.619 0.00 0.00 0.00 6.13
2086 2281 2.027192 TCAGAGTGCTTAAATTCCGCCT 60.027 45.455 0.00 0.00 0.00 5.52
2087 2282 2.096496 CAGAGTGCTTAAATTCCGCCTG 59.904 50.000 0.00 0.00 0.00 4.85
2088 2283 0.811281 AGTGCTTAAATTCCGCCTGC 59.189 50.000 0.00 0.00 0.00 4.85
2100 2295 2.360852 GCCTGCAGACCAGCACAT 60.361 61.111 17.39 0.00 40.11 3.21
2140 2335 1.258445 ACCACTACGAGGCCAAGAGG 61.258 60.000 5.01 7.41 38.23 3.69
2150 2345 3.089838 CCAAGAGGCCCACATCCA 58.910 61.111 0.00 0.00 0.00 3.41
2153 2348 1.002134 AAGAGGCCCACATCCAACG 60.002 57.895 0.00 0.00 0.00 4.10
2154 2349 1.488705 AAGAGGCCCACATCCAACGA 61.489 55.000 0.00 0.00 0.00 3.85
2157 2352 0.907704 AGGCCCACATCCAACGACTA 60.908 55.000 0.00 0.00 0.00 2.59
2158 2353 0.180406 GGCCCACATCCAACGACTAT 59.820 55.000 0.00 0.00 0.00 2.12
2159 2354 1.583054 GCCCACATCCAACGACTATC 58.417 55.000 0.00 0.00 0.00 2.08
2160 2355 1.134521 GCCCACATCCAACGACTATCA 60.135 52.381 0.00 0.00 0.00 2.15
2161 2356 2.826428 CCCACATCCAACGACTATCAG 58.174 52.381 0.00 0.00 0.00 2.90
2162 2357 2.168521 CCCACATCCAACGACTATCAGT 59.831 50.000 0.00 0.00 0.00 3.41
2163 2358 3.369471 CCCACATCCAACGACTATCAGTT 60.369 47.826 0.00 0.00 0.00 3.16
2164 2359 4.142026 CCCACATCCAACGACTATCAGTTA 60.142 45.833 0.00 0.00 0.00 2.24
2165 2360 5.416083 CCACATCCAACGACTATCAGTTAA 58.584 41.667 0.00 0.00 0.00 2.01
2166 2361 5.872617 CCACATCCAACGACTATCAGTTAAA 59.127 40.000 0.00 0.00 0.00 1.52
2167 2362 6.370442 CCACATCCAACGACTATCAGTTAAAA 59.630 38.462 0.00 0.00 0.00 1.52
2168 2363 7.413000 CCACATCCAACGACTATCAGTTAAAAG 60.413 40.741 0.00 0.00 0.00 2.27
2169 2364 7.117812 CACATCCAACGACTATCAGTTAAAAGT 59.882 37.037 0.00 0.00 0.00 2.66
2170 2365 7.660208 ACATCCAACGACTATCAGTTAAAAGTT 59.340 33.333 0.00 0.00 0.00 2.66
2171 2366 7.647907 TCCAACGACTATCAGTTAAAAGTTC 57.352 36.000 0.00 0.00 0.00 3.01
2172 2367 7.211573 TCCAACGACTATCAGTTAAAAGTTCA 58.788 34.615 0.00 0.00 0.00 3.18
2173 2368 7.711772 TCCAACGACTATCAGTTAAAAGTTCAA 59.288 33.333 0.00 0.00 0.00 2.69
2174 2369 8.339714 CCAACGACTATCAGTTAAAAGTTCAAA 58.660 33.333 0.00 0.00 0.00 2.69
2175 2370 9.155053 CAACGACTATCAGTTAAAAGTTCAAAC 57.845 33.333 0.00 0.00 0.00 2.93
2176 2371 8.428186 ACGACTATCAGTTAAAAGTTCAAACA 57.572 30.769 0.00 0.00 0.00 2.83
2177 2372 8.548721 ACGACTATCAGTTAAAAGTTCAAACAG 58.451 33.333 0.00 0.00 0.00 3.16
2178 2373 8.761497 CGACTATCAGTTAAAAGTTCAAACAGA 58.239 33.333 0.00 1.91 0.00 3.41
2193 2388 9.868277 AGTTCAAACAGAATACTCTTAGAGATG 57.132 33.333 16.95 8.52 38.76 2.90
2209 2404 1.002366 GATGTGGCTTCACGCACTAG 58.998 55.000 0.00 0.00 44.00 2.57
2213 2408 1.201647 GTGGCTTCACGCACTAGACTA 59.798 52.381 0.00 0.00 41.67 2.59
2215 2410 2.159240 TGGCTTCACGCACTAGACTATG 60.159 50.000 0.00 0.00 41.67 2.23
2217 2412 2.464865 CTTCACGCACTAGACTATGCC 58.535 52.381 0.00 0.00 38.69 4.40
2245 2440 5.407084 GGCACGGCTAACAAATTAAAAATGT 59.593 36.000 0.00 0.00 0.00 2.71
2246 2441 6.400621 GGCACGGCTAACAAATTAAAAATGTC 60.401 38.462 0.00 0.00 0.00 3.06
2249 2444 8.001549 CACGGCTAACAAATTAAAAATGTCAAC 58.998 33.333 0.00 0.00 0.00 3.18
2274 2469 4.537135 TCTAAGAGTCAAAGTGCCGAAT 57.463 40.909 0.00 0.00 0.00 3.34
2329 2524 9.449719 ACAAAATTCTGGTATAACCTAAGACAG 57.550 33.333 0.00 0.00 39.58 3.51
2348 2543 3.449018 ACAGCCAACCAGTATAGAGTCAG 59.551 47.826 0.00 0.00 0.00 3.51
2350 2545 2.432510 GCCAACCAGTATAGAGTCAGCT 59.567 50.000 0.00 0.00 0.00 4.24
2356 2551 3.243367 CCAGTATAGAGTCAGCTGTGCTC 60.243 52.174 23.66 23.66 36.40 4.26
2424 2624 2.027625 CTGACCCCGACTTCGCAAC 61.028 63.158 0.00 0.00 38.18 4.17
2433 2633 4.154556 CCCCGACTTCGCAACTTTTAATAA 59.845 41.667 0.00 0.00 38.18 1.40
2434 2634 5.163693 CCCCGACTTCGCAACTTTTAATAAT 60.164 40.000 0.00 0.00 38.18 1.28
2435 2635 5.963586 CCCGACTTCGCAACTTTTAATAATC 59.036 40.000 0.00 0.00 38.18 1.75
2468 2671 7.734942 TGCCTATTCTGATTTTCCAACTTTTT 58.265 30.769 0.00 0.00 0.00 1.94
2495 2698 8.394971 TCTCATAAAAGACAGAAAATTGCTGA 57.605 30.769 8.18 0.00 36.86 4.26
2496 2699 8.849168 TCTCATAAAAGACAGAAAATTGCTGAA 58.151 29.630 8.18 0.00 36.86 3.02
2497 2700 9.467258 CTCATAAAAGACAGAAAATTGCTGAAA 57.533 29.630 8.18 0.00 36.86 2.69
2498 2701 9.814899 TCATAAAAGACAGAAAATTGCTGAAAA 57.185 25.926 8.18 0.00 36.86 2.29
2550 2756 7.230849 ACTGGCATTGTGAATATTTTCAAGA 57.769 32.000 0.00 0.00 43.29 3.02
2571 2777 3.610040 TCAAGTGGCGATTCATGTACT 57.390 42.857 0.00 0.00 0.00 2.73
2572 2778 4.729227 TCAAGTGGCGATTCATGTACTA 57.271 40.909 0.00 0.00 0.00 1.82
2573 2779 4.682787 TCAAGTGGCGATTCATGTACTAG 58.317 43.478 0.00 0.00 0.00 2.57
2635 2845 1.592400 ATGCAGTGTGTGATGGCAGC 61.592 55.000 0.00 0.00 37.96 5.25
2674 2884 1.022982 ACGAGATGTCAGCCGTCGTA 61.023 55.000 3.83 0.00 41.82 3.43
2707 2917 0.617935 AGAAGGCCAAGAAGCTCCTC 59.382 55.000 5.01 0.00 0.00 3.71
2740 2950 1.395954 GCGTCGGGGTTCAAGAAATAC 59.604 52.381 0.00 0.00 0.00 1.89
2762 2972 0.038892 CATGTGGTTCAGCAACAGGC 60.039 55.000 0.00 0.00 45.30 4.85
2836 3046 1.214367 CGATTATAAACGCCGTGGCT 58.786 50.000 9.55 0.00 39.32 4.75
2916 3126 6.635166 AAAAGCGAAAACACATTTACGTTT 57.365 29.167 0.00 0.00 36.92 3.60
2979 3271 4.492646 TGGATGCTCCTACATTAGATGGA 58.507 43.478 4.21 0.00 37.46 3.41
2982 3274 6.112058 GGATGCTCCTACATTAGATGGAATC 58.888 44.000 0.00 0.00 37.28 2.52
2997 3312 6.808008 GATGGAATCAGACTTCAACAAGAA 57.192 37.500 0.00 0.00 44.70 2.52
2998 3313 6.566197 ATGGAATCAGACTTCAACAAGAAC 57.434 37.500 0.00 0.00 33.34 3.01
2999 3314 5.684704 TGGAATCAGACTTCAACAAGAACT 58.315 37.500 0.00 0.00 33.34 3.01
3002 3317 7.939039 TGGAATCAGACTTCAACAAGAACTATT 59.061 33.333 0.00 0.00 33.34 1.73
3100 3547 7.307632 CCAAAAGCATATACTCTGCAGATACAC 60.308 40.741 18.63 3.60 42.15 2.90
3175 3622 2.561209 TACTTCAGTCCCCATGGCTA 57.439 50.000 6.09 0.00 0.00 3.93
3313 3760 2.301577 ACCTCTTTGACTCTATGCGC 57.698 50.000 0.00 0.00 0.00 6.09
3365 3812 1.011451 GGTGAGCTCGCACTTCTGAC 61.011 60.000 27.48 7.98 38.78 3.51
3366 3813 0.319040 GTGAGCTCGCACTTCTGACA 60.319 55.000 22.25 0.00 35.91 3.58
3367 3814 0.605083 TGAGCTCGCACTTCTGACAT 59.395 50.000 9.64 0.00 0.00 3.06
3368 3815 0.997932 GAGCTCGCACTTCTGACATG 59.002 55.000 0.00 0.00 0.00 3.21
3397 3844 9.265901 TCTAAGACAAGATCTATTTAGCATTGC 57.734 33.333 0.00 0.00 36.27 3.56
3402 3849 7.934457 ACAAGATCTATTTAGCATTGCGAATT 58.066 30.769 15.22 10.16 0.00 2.17
3407 3854 9.111702 GATCTATTTAGCATTGCGAATTTTCTC 57.888 33.333 15.22 4.31 0.00 2.87
3408 3855 8.213518 TCTATTTAGCATTGCGAATTTTCTCT 57.786 30.769 15.22 0.00 0.00 3.10
3410 3857 5.878332 TTAGCATTGCGAATTTTCTCTCA 57.122 34.783 2.38 0.00 0.00 3.27
3411 3858 4.771590 AGCATTGCGAATTTTCTCTCAA 57.228 36.364 2.38 0.00 0.00 3.02
3412 3859 5.320549 AGCATTGCGAATTTTCTCTCAAT 57.679 34.783 2.38 0.00 0.00 2.57
3413 3860 5.338365 AGCATTGCGAATTTTCTCTCAATC 58.662 37.500 2.38 0.00 0.00 2.67
3414 3861 4.203764 GCATTGCGAATTTTCTCTCAATCG 59.796 41.667 0.00 0.00 0.00 3.34
3415 3862 3.389687 TGCGAATTTTCTCTCAATCGC 57.610 42.857 10.65 10.65 44.28 4.58
3416 3863 3.389687 GCGAATTTTCTCTCAATCGCA 57.610 42.857 12.43 0.00 43.61 5.10
3417 3864 3.747193 GCGAATTTTCTCTCAATCGCAA 58.253 40.909 12.43 0.00 43.61 4.85
3423 3870 2.084610 TCTCTCAATCGCAACACCAG 57.915 50.000 0.00 0.00 0.00 4.00
3432 3879 0.166597 CGCAACACCAGCATACACTG 59.833 55.000 0.00 0.00 37.42 3.66
3461 3908 8.732746 ATATTATTTCAACCTACAGTGGTGAC 57.267 34.615 0.00 0.00 40.73 3.67
3475 3922 2.287103 GTGGTGACAACTTTTCCTCGAC 59.713 50.000 0.00 0.00 46.06 4.20
3477 3924 1.871676 GTGACAACTTTTCCTCGACCC 59.128 52.381 0.00 0.00 0.00 4.46
3485 3932 4.981812 ACTTTTCCTCGACCCTTTGTAAT 58.018 39.130 0.00 0.00 0.00 1.89
3496 3943 8.167605 TCGACCCTTTGTAATGTTTCAATTTA 57.832 30.769 0.00 0.00 0.00 1.40
3516 3963 3.245518 ACAACTTGTTTTTGCAGGACC 57.754 42.857 0.00 0.00 0.00 4.46
3530 3977 1.745087 CAGGACCCAATGTTTGATCCG 59.255 52.381 0.00 0.00 0.00 4.18
3738 4185 1.001641 CAGGCTGGGGTCTTTCCTG 60.002 63.158 6.61 0.00 38.41 3.86
3773 4220 2.611518 GACGAGCTGAACATGCTACTT 58.388 47.619 0.00 0.00 41.30 2.24
3931 4387 0.321346 TGCAGATGGAGCGAGTTGAA 59.679 50.000 0.00 0.00 33.85 2.69
4049 4506 5.710099 TCCCATTGTTGTTGGTTAGATCTTC 59.290 40.000 0.00 0.00 31.99 2.87
4123 4582 3.137544 TGTAATTGGGAGGTCACTTGTGT 59.862 43.478 0.46 0.00 0.00 3.72
4127 4586 1.148273 GGAGGTCACTTGTGTGCCA 59.852 57.895 15.01 0.00 43.49 4.92
4143 4602 1.899142 TGCCAAGATGTAAAAAGGGGC 59.101 47.619 0.00 0.00 40.51 5.80
4237 4696 1.380524 TTTTTCAGCAACGGTTCGGA 58.619 45.000 0.00 0.00 0.00 4.55
4469 6926 6.952743 ACATTGAGATGCGTGATATTCTTTC 58.047 36.000 0.00 0.00 36.72 2.62
4481 6938 9.337091 GCGTGATATTCTTTCTCTCTATAGAAC 57.663 37.037 3.57 0.00 35.25 3.01
4502 6959 2.801679 CACCATTTGTGGATGTTGCAAC 59.198 45.455 22.83 22.83 41.52 4.17
4527 6984 6.348950 CCTTGCAATAACGACCAAGATAAACA 60.349 38.462 0.00 0.00 37.46 2.83
4529 6986 6.781138 TGCAATAACGACCAAGATAAACATC 58.219 36.000 0.00 0.00 0.00 3.06
4562 7019 3.944087 ACCTCACTGCCTGATTAAGTTC 58.056 45.455 0.00 0.00 0.00 3.01
4569 7026 2.375174 TGCCTGATTAAGTTCCCACAGT 59.625 45.455 0.00 0.00 0.00 3.55
4740 7203 7.311360 CCCTATATATCTCTTTTCCAACCCTCC 60.311 44.444 0.00 0.00 0.00 4.30
4812 7275 0.322816 ACTGTGGTGGCATGGTGATC 60.323 55.000 0.00 0.00 0.00 2.92
4842 7305 5.675538 AGAGCTTATAATCACCACAACTCC 58.324 41.667 0.00 0.00 0.00 3.85
4885 7348 0.036732 TTCCTCGCATCTTGGCAAGT 59.963 50.000 25.39 11.29 0.00 3.16
4937 7400 6.951062 TGTCTGAATGTTGGTCATAAACAA 57.049 33.333 0.00 0.00 40.69 2.83
4939 7402 6.545666 TGTCTGAATGTTGGTCATAAACAAGT 59.454 34.615 0.00 0.00 40.69 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.917336 TTATCTGACCGTTGGGGCCC 61.917 60.000 18.17 18.17 42.67 5.80
26 27 0.034863 TTTATCTGACCGTTGGGGCC 60.035 55.000 0.00 0.00 42.67 5.80
27 28 1.471287 GTTTTATCTGACCGTTGGGGC 59.529 52.381 0.00 0.00 44.16 5.80
28 29 1.735571 CGTTTTATCTGACCGTTGGGG 59.264 52.381 0.00 0.00 43.62 4.96
29 30 2.414138 GACGTTTTATCTGACCGTTGGG 59.586 50.000 0.00 0.00 40.11 4.12
30 31 3.061322 TGACGTTTTATCTGACCGTTGG 58.939 45.455 0.00 0.00 0.00 3.77
31 32 4.718858 TTGACGTTTTATCTGACCGTTG 57.281 40.909 0.00 0.00 0.00 4.10
32 33 5.061311 CGTATTGACGTTTTATCTGACCGTT 59.939 40.000 0.00 0.00 44.31 4.44
33 34 4.560035 CGTATTGACGTTTTATCTGACCGT 59.440 41.667 0.00 0.00 44.31 4.83
34 35 5.049921 CGTATTGACGTTTTATCTGACCG 57.950 43.478 0.00 0.00 44.31 4.79
54 55 9.444600 AAAGGTCTAAATCATGTATAACAACGT 57.555 29.630 0.00 0.00 0.00 3.99
62 63 8.584157 TGTTGCAAAAAGGTCTAAATCATGTAT 58.416 29.630 0.00 0.00 0.00 2.29
63 64 7.865385 GTGTTGCAAAAAGGTCTAAATCATGTA 59.135 33.333 0.00 0.00 0.00 2.29
64 65 6.701400 GTGTTGCAAAAAGGTCTAAATCATGT 59.299 34.615 0.00 0.00 0.00 3.21
65 66 6.925165 AGTGTTGCAAAAAGGTCTAAATCATG 59.075 34.615 0.00 0.00 0.00 3.07
66 67 7.054491 AGTGTTGCAAAAAGGTCTAAATCAT 57.946 32.000 0.00 0.00 0.00 2.45
67 68 6.463995 AGTGTTGCAAAAAGGTCTAAATCA 57.536 33.333 0.00 0.00 0.00 2.57
68 69 8.349983 TCTAAGTGTTGCAAAAAGGTCTAAATC 58.650 33.333 0.00 0.00 0.00 2.17
69 70 8.135529 GTCTAAGTGTTGCAAAAAGGTCTAAAT 58.864 33.333 0.00 0.00 0.00 1.40
70 71 7.415877 GGTCTAAGTGTTGCAAAAAGGTCTAAA 60.416 37.037 0.00 0.00 0.00 1.85
71 72 6.038936 GGTCTAAGTGTTGCAAAAAGGTCTAA 59.961 38.462 0.00 0.00 0.00 2.10
72 73 5.529800 GGTCTAAGTGTTGCAAAAAGGTCTA 59.470 40.000 0.00 0.00 0.00 2.59
73 74 4.338400 GGTCTAAGTGTTGCAAAAAGGTCT 59.662 41.667 0.00 0.00 0.00 3.85
74 75 4.499188 GGGTCTAAGTGTTGCAAAAAGGTC 60.499 45.833 0.00 0.00 0.00 3.85
75 76 3.383505 GGGTCTAAGTGTTGCAAAAAGGT 59.616 43.478 0.00 0.00 0.00 3.50
76 77 3.243737 GGGGTCTAAGTGTTGCAAAAAGG 60.244 47.826 0.00 0.00 0.00 3.11
77 78 3.383185 TGGGGTCTAAGTGTTGCAAAAAG 59.617 43.478 0.00 0.00 0.00 2.27
78 79 3.366396 TGGGGTCTAAGTGTTGCAAAAA 58.634 40.909 0.00 0.00 0.00 1.94
79 80 3.019799 TGGGGTCTAAGTGTTGCAAAA 57.980 42.857 0.00 0.00 0.00 2.44
80 81 2.738587 TGGGGTCTAAGTGTTGCAAA 57.261 45.000 0.00 0.00 0.00 3.68
81 82 2.738587 TTGGGGTCTAAGTGTTGCAA 57.261 45.000 0.00 0.00 0.00 4.08
82 83 2.738587 TTTGGGGTCTAAGTGTTGCA 57.261 45.000 0.00 0.00 0.00 4.08
83 84 3.572255 TCATTTTGGGGTCTAAGTGTTGC 59.428 43.478 0.00 0.00 0.00 4.17
84 85 5.982890 ATCATTTTGGGGTCTAAGTGTTG 57.017 39.130 0.00 0.00 0.00 3.33
85 86 6.659242 CAGTATCATTTTGGGGTCTAAGTGTT 59.341 38.462 0.00 0.00 0.00 3.32
86 87 6.012858 TCAGTATCATTTTGGGGTCTAAGTGT 60.013 38.462 0.00 0.00 0.00 3.55
87 88 6.414732 TCAGTATCATTTTGGGGTCTAAGTG 58.585 40.000 0.00 0.00 0.00 3.16
88 89 6.636454 TCAGTATCATTTTGGGGTCTAAGT 57.364 37.500 0.00 0.00 0.00 2.24
89 90 8.408601 CAATTCAGTATCATTTTGGGGTCTAAG 58.591 37.037 0.00 0.00 0.00 2.18
90 91 7.147915 GCAATTCAGTATCATTTTGGGGTCTAA 60.148 37.037 0.00 0.00 0.00 2.10
91 92 6.321181 GCAATTCAGTATCATTTTGGGGTCTA 59.679 38.462 0.00 0.00 0.00 2.59
92 93 5.127682 GCAATTCAGTATCATTTTGGGGTCT 59.872 40.000 0.00 0.00 0.00 3.85
93 94 5.351458 GCAATTCAGTATCATTTTGGGGTC 58.649 41.667 0.00 0.00 0.00 4.46
94 95 4.142182 CGCAATTCAGTATCATTTTGGGGT 60.142 41.667 0.00 0.00 0.00 4.95
95 96 4.097741 TCGCAATTCAGTATCATTTTGGGG 59.902 41.667 0.00 0.00 0.00 4.96
96 97 5.036737 GTCGCAATTCAGTATCATTTTGGG 58.963 41.667 0.00 0.00 0.00 4.12
97 98 5.036737 GGTCGCAATTCAGTATCATTTTGG 58.963 41.667 0.00 0.00 0.00 3.28
98 99 5.639757 TGGTCGCAATTCAGTATCATTTTG 58.360 37.500 0.00 0.00 0.00 2.44
99 100 5.895636 TGGTCGCAATTCAGTATCATTTT 57.104 34.783 0.00 0.00 0.00 1.82
100 101 5.182950 TGTTGGTCGCAATTCAGTATCATTT 59.817 36.000 0.00 0.00 0.00 2.32
101 102 4.699735 TGTTGGTCGCAATTCAGTATCATT 59.300 37.500 0.00 0.00 0.00 2.57
102 103 4.094887 GTGTTGGTCGCAATTCAGTATCAT 59.905 41.667 0.00 0.00 0.00 2.45
103 104 3.435327 GTGTTGGTCGCAATTCAGTATCA 59.565 43.478 0.00 0.00 0.00 2.15
104 105 3.483574 CGTGTTGGTCGCAATTCAGTATC 60.484 47.826 0.00 0.00 0.00 2.24
105 106 2.415168 CGTGTTGGTCGCAATTCAGTAT 59.585 45.455 0.00 0.00 0.00 2.12
106 107 1.795872 CGTGTTGGTCGCAATTCAGTA 59.204 47.619 0.00 0.00 0.00 2.74
107 108 0.586319 CGTGTTGGTCGCAATTCAGT 59.414 50.000 0.00 0.00 0.00 3.41
108 109 0.865111 TCGTGTTGGTCGCAATTCAG 59.135 50.000 0.00 0.00 0.00 3.02
109 110 1.518325 ATCGTGTTGGTCGCAATTCA 58.482 45.000 0.00 0.00 0.00 2.57
110 111 2.611974 AATCGTGTTGGTCGCAATTC 57.388 45.000 0.00 0.00 0.00 2.17
111 112 3.071479 ACTAATCGTGTTGGTCGCAATT 58.929 40.909 0.00 0.00 0.00 2.32
112 113 2.415168 CACTAATCGTGTTGGTCGCAAT 59.585 45.455 0.00 0.00 38.84 3.56
113 114 1.795872 CACTAATCGTGTTGGTCGCAA 59.204 47.619 0.00 0.00 38.84 4.85
114 115 1.000052 TCACTAATCGTGTTGGTCGCA 60.000 47.619 0.00 0.00 44.16 5.10
115 116 1.705256 TCACTAATCGTGTTGGTCGC 58.295 50.000 0.00 0.00 44.16 5.19
116 117 4.499399 CAGTATCACTAATCGTGTTGGTCG 59.501 45.833 0.00 0.00 44.16 4.79
117 118 5.515626 GTCAGTATCACTAATCGTGTTGGTC 59.484 44.000 0.00 0.00 44.16 4.02
118 119 5.185249 AGTCAGTATCACTAATCGTGTTGGT 59.815 40.000 0.00 0.00 44.16 3.67
119 120 5.651530 AGTCAGTATCACTAATCGTGTTGG 58.348 41.667 0.00 0.00 44.16 3.77
120 121 5.452623 CGAGTCAGTATCACTAATCGTGTTG 59.547 44.000 0.00 0.00 44.16 3.33
121 122 5.123502 ACGAGTCAGTATCACTAATCGTGTT 59.876 40.000 10.12 0.00 44.16 3.32
122 123 4.634883 ACGAGTCAGTATCACTAATCGTGT 59.365 41.667 10.12 0.00 44.16 4.49
123 124 5.158101 ACGAGTCAGTATCACTAATCGTG 57.842 43.478 10.12 0.00 45.18 4.35
124 125 6.314648 TGTTACGAGTCAGTATCACTAATCGT 59.685 38.462 13.52 13.52 40.46 3.73
125 126 6.712549 TGTTACGAGTCAGTATCACTAATCG 58.287 40.000 0.00 0.00 34.70 3.34
126 127 8.343366 TCATGTTACGAGTCAGTATCACTAATC 58.657 37.037 0.00 0.00 31.55 1.75
127 128 8.221965 TCATGTTACGAGTCAGTATCACTAAT 57.778 34.615 0.00 0.00 31.55 1.73
128 129 7.619964 TCATGTTACGAGTCAGTATCACTAA 57.380 36.000 0.00 0.00 31.55 2.24
129 130 7.639945 CATCATGTTACGAGTCAGTATCACTA 58.360 38.462 0.00 2.51 31.55 2.74
130 131 6.499172 CATCATGTTACGAGTCAGTATCACT 58.501 40.000 0.00 0.00 31.55 3.41
131 132 5.174035 GCATCATGTTACGAGTCAGTATCAC 59.826 44.000 0.00 1.53 31.55 3.06
132 133 5.281727 GCATCATGTTACGAGTCAGTATCA 58.718 41.667 0.00 7.74 32.80 2.15
133 134 4.681942 GGCATCATGTTACGAGTCAGTATC 59.318 45.833 0.00 0.00 0.00 2.24
134 135 4.621991 GGCATCATGTTACGAGTCAGTAT 58.378 43.478 0.00 0.00 0.00 2.12
135 136 3.488553 CGGCATCATGTTACGAGTCAGTA 60.489 47.826 0.00 0.00 0.00 2.74
136 137 2.735444 CGGCATCATGTTACGAGTCAGT 60.735 50.000 0.00 0.00 0.00 3.41
137 138 1.854743 CGGCATCATGTTACGAGTCAG 59.145 52.381 0.00 0.00 0.00 3.51
138 139 1.474879 TCGGCATCATGTTACGAGTCA 59.525 47.619 0.00 0.00 0.00 3.41
139 140 2.203800 TCGGCATCATGTTACGAGTC 57.796 50.000 0.00 0.00 0.00 3.36
140 141 2.094182 ACTTCGGCATCATGTTACGAGT 60.094 45.455 0.00 0.00 34.85 4.18
141 142 2.282555 CACTTCGGCATCATGTTACGAG 59.717 50.000 0.00 0.00 34.85 4.18
142 143 2.267426 CACTTCGGCATCATGTTACGA 58.733 47.619 0.00 0.00 0.00 3.43
143 144 1.999735 ACACTTCGGCATCATGTTACG 59.000 47.619 0.00 0.00 0.00 3.18
144 145 2.095853 CCACACTTCGGCATCATGTTAC 59.904 50.000 0.00 0.00 0.00 2.50
145 146 2.290008 ACCACACTTCGGCATCATGTTA 60.290 45.455 0.00 0.00 0.00 2.41
146 147 1.167851 CCACACTTCGGCATCATGTT 58.832 50.000 0.00 0.00 0.00 2.71
147 148 0.036732 ACCACACTTCGGCATCATGT 59.963 50.000 0.00 0.00 0.00 3.21
148 149 1.935873 CTACCACACTTCGGCATCATG 59.064 52.381 0.00 0.00 0.00 3.07
149 150 1.743772 GCTACCACACTTCGGCATCAT 60.744 52.381 0.00 0.00 0.00 2.45
150 151 0.391130 GCTACCACACTTCGGCATCA 60.391 55.000 0.00 0.00 0.00 3.07
151 152 0.108138 AGCTACCACACTTCGGCATC 60.108 55.000 0.00 0.00 0.00 3.91
152 153 0.324943 AAGCTACCACACTTCGGCAT 59.675 50.000 0.00 0.00 0.00 4.40
153 154 0.320421 GAAGCTACCACACTTCGGCA 60.320 55.000 0.00 0.00 33.56 5.69
154 155 1.019805 GGAAGCTACCACACTTCGGC 61.020 60.000 0.00 0.00 42.62 5.54
155 156 0.608640 AGGAAGCTACCACACTTCGG 59.391 55.000 0.00 0.00 42.62 4.30
156 157 1.714794 CAGGAAGCTACCACACTTCG 58.285 55.000 0.00 0.00 42.62 3.79
157 158 1.270839 TGCAGGAAGCTACCACACTTC 60.271 52.381 0.00 0.00 45.94 3.01
158 159 0.764890 TGCAGGAAGCTACCACACTT 59.235 50.000 0.00 0.00 45.94 3.16
159 160 0.764890 TTGCAGGAAGCTACCACACT 59.235 50.000 0.00 0.00 45.94 3.55
160 161 1.826385 ATTGCAGGAAGCTACCACAC 58.174 50.000 0.00 0.00 45.94 3.82
161 162 2.584835 AATTGCAGGAAGCTACCACA 57.415 45.000 0.00 0.00 45.94 4.17
162 163 3.128764 GGTTAATTGCAGGAAGCTACCAC 59.871 47.826 0.00 0.00 45.94 4.16
163 164 3.352648 GGTTAATTGCAGGAAGCTACCA 58.647 45.455 0.00 0.00 45.94 3.25
164 165 2.688446 GGGTTAATTGCAGGAAGCTACC 59.312 50.000 0.00 0.00 45.94 3.18
165 166 2.354821 CGGGTTAATTGCAGGAAGCTAC 59.645 50.000 0.00 0.00 45.94 3.58
166 167 2.639065 CGGGTTAATTGCAGGAAGCTA 58.361 47.619 0.00 0.00 45.94 3.32
167 168 1.463674 CGGGTTAATTGCAGGAAGCT 58.536 50.000 6.50 0.00 45.94 3.74
168 169 0.455815 CCGGGTTAATTGCAGGAAGC 59.544 55.000 0.00 0.00 45.96 3.86
169 170 1.834188 ACCGGGTTAATTGCAGGAAG 58.166 50.000 6.32 0.00 0.00 3.46
170 171 2.296073 AACCGGGTTAATTGCAGGAA 57.704 45.000 11.50 0.00 0.00 3.36
171 172 2.356330 CCTAACCGGGTTAATTGCAGGA 60.356 50.000 19.53 0.00 0.00 3.86
172 173 2.021457 CCTAACCGGGTTAATTGCAGG 58.979 52.381 19.53 14.16 0.00 4.85
173 174 1.404035 GCCTAACCGGGTTAATTGCAG 59.596 52.381 19.53 9.26 0.00 4.41
174 175 1.465794 GCCTAACCGGGTTAATTGCA 58.534 50.000 19.53 0.00 0.00 4.08
175 176 0.379316 CGCCTAACCGGGTTAATTGC 59.621 55.000 19.53 18.97 0.00 3.56
176 177 1.741528 ACGCCTAACCGGGTTAATTG 58.258 50.000 19.53 13.75 0.00 2.32
177 178 2.086094 CAACGCCTAACCGGGTTAATT 58.914 47.619 19.53 9.56 0.00 1.40
178 179 1.679640 CCAACGCCTAACCGGGTTAAT 60.680 52.381 19.53 4.33 0.00 1.40
179 180 0.321475 CCAACGCCTAACCGGGTTAA 60.321 55.000 19.53 5.23 0.00 2.01
180 181 1.190833 TCCAACGCCTAACCGGGTTA 61.191 55.000 18.17 18.17 0.00 2.85
181 182 1.844544 ATCCAACGCCTAACCGGGTT 61.845 55.000 17.83 17.83 0.00 4.11
182 183 2.248086 GATCCAACGCCTAACCGGGT 62.248 60.000 6.32 0.00 0.00 5.28
183 184 1.523032 GATCCAACGCCTAACCGGG 60.523 63.158 6.32 0.00 0.00 5.73
229 230 2.697229 TGTCTGCATCCATCGAGAAGAT 59.303 45.455 0.00 0.00 41.01 2.40
250 252 2.034066 CCCACCGAACCACTGCAT 59.966 61.111 0.00 0.00 0.00 3.96
275 277 3.421844 AGGCTCAAACATAAACCTGGAC 58.578 45.455 0.00 0.00 0.00 4.02
321 323 2.700773 GCCCGGTTGCAATCCTGTC 61.701 63.158 0.59 0.00 0.00 3.51
338 353 1.092348 GAATGGAGTTTACCCCGTGC 58.908 55.000 0.00 0.00 0.00 5.34
442 497 5.542779 GGTTGCTAACGAGAATCAGGATAT 58.457 41.667 0.00 0.00 33.17 1.63
717 796 0.178944 TTCACGTGAAGAGGGAGGGA 60.179 55.000 26.53 0.56 0.00 4.20
718 797 0.037232 GTTCACGTGAAGAGGGAGGG 60.037 60.000 30.38 0.00 34.27 4.30
846 929 0.964860 TTGGCGTTGGATGGTGGATG 60.965 55.000 0.00 0.00 0.00 3.51
863 946 2.614057 GAGACGGGGATTATTGCTGTTG 59.386 50.000 0.00 0.00 0.00 3.33
893 976 1.937546 GCGGAAGAAATGGTGGGCTG 61.938 60.000 0.00 0.00 0.00 4.85
917 1000 2.099405 GAAGGATTCCAAATTCCGGCA 58.901 47.619 5.29 0.00 39.83 5.69
994 1106 1.523154 TTGGTGAACTTCATGGCCGC 61.523 55.000 0.00 0.00 0.00 6.53
995 1107 0.523072 CTTGGTGAACTTCATGGCCG 59.477 55.000 0.00 0.00 0.00 6.13
996 1108 1.815003 CTCTTGGTGAACTTCATGGCC 59.185 52.381 0.00 0.00 0.00 5.36
997 1109 1.815003 CCTCTTGGTGAACTTCATGGC 59.185 52.381 0.00 0.00 0.00 4.40
1077 1189 0.671781 TCTTCTTGAGGCGCTTGAGC 60.672 55.000 7.64 0.00 37.78 4.26
1150 1262 3.752167 GGAGGAGGAGGACGGGGA 61.752 72.222 0.00 0.00 0.00 4.81
1153 1265 2.829458 GTCGGAGGAGGAGGACGG 60.829 72.222 0.00 0.00 0.00 4.79
1216 1337 1.444553 GGAGACAAGAGCGGTCGTG 60.445 63.158 25.44 25.44 40.20 4.35
1219 1340 0.603569 TGAAGGAGACAAGAGCGGTC 59.396 55.000 6.48 6.48 35.50 4.79
1221 1342 1.472376 GGATGAAGGAGACAAGAGCGG 60.472 57.143 0.00 0.00 0.00 5.52
1223 1344 4.588528 AGATAGGATGAAGGAGACAAGAGC 59.411 45.833 0.00 0.00 0.00 4.09
1224 1345 6.070656 AGAGATAGGATGAAGGAGACAAGAG 58.929 44.000 0.00 0.00 0.00 2.85
1225 1346 6.024563 AGAGATAGGATGAAGGAGACAAGA 57.975 41.667 0.00 0.00 0.00 3.02
1229 1350 5.385198 ACAGAGAGATAGGATGAAGGAGAC 58.615 45.833 0.00 0.00 0.00 3.36
1231 1352 6.550854 AGAAACAGAGAGATAGGATGAAGGAG 59.449 42.308 0.00 0.00 0.00 3.69
1236 1357 7.398618 AGAACAAGAAACAGAGAGATAGGATGA 59.601 37.037 0.00 0.00 0.00 2.92
1237 1358 7.555087 AGAACAAGAAACAGAGAGATAGGATG 58.445 38.462 0.00 0.00 0.00 3.51
1238 1359 7.732222 AGAACAAGAAACAGAGAGATAGGAT 57.268 36.000 0.00 0.00 0.00 3.24
1239 1360 7.233553 TCAAGAACAAGAAACAGAGAGATAGGA 59.766 37.037 0.00 0.00 0.00 2.94
1241 1362 9.434420 AATCAAGAACAAGAAACAGAGAGATAG 57.566 33.333 0.00 0.00 0.00 2.08
1243 1364 7.935755 TCAATCAAGAACAAGAAACAGAGAGAT 59.064 33.333 0.00 0.00 0.00 2.75
1244 1365 7.275183 TCAATCAAGAACAAGAAACAGAGAGA 58.725 34.615 0.00 0.00 0.00 3.10
1246 1367 8.455903 AATCAATCAAGAACAAGAAACAGAGA 57.544 30.769 0.00 0.00 0.00 3.10
1247 1368 9.178427 GAAATCAATCAAGAACAAGAAACAGAG 57.822 33.333 0.00 0.00 0.00 3.35
1249 1370 8.139989 AGGAAATCAATCAAGAACAAGAAACAG 58.860 33.333 0.00 0.00 0.00 3.16
1251 1372 8.877808 AAGGAAATCAATCAAGAACAAGAAAC 57.122 30.769 0.00 0.00 0.00 2.78
1253 1374 8.694540 TCAAAGGAAATCAATCAAGAACAAGAA 58.305 29.630 0.00 0.00 0.00 2.52
1255 1376 7.113965 CGTCAAAGGAAATCAATCAAGAACAAG 59.886 37.037 0.00 0.00 0.00 3.16
1257 1378 6.262049 TCGTCAAAGGAAATCAATCAAGAACA 59.738 34.615 0.00 0.00 0.00 3.18
1258 1379 6.668323 TCGTCAAAGGAAATCAATCAAGAAC 58.332 36.000 0.00 0.00 0.00 3.01
1259 1380 6.875948 TCGTCAAAGGAAATCAATCAAGAA 57.124 33.333 0.00 0.00 0.00 2.52
1260 1381 6.875948 TTCGTCAAAGGAAATCAATCAAGA 57.124 33.333 0.00 0.00 0.00 3.02
1261 1382 8.524870 AAATTCGTCAAAGGAAATCAATCAAG 57.475 30.769 0.00 0.00 0.00 3.02
1262 1383 8.763356 CAAAATTCGTCAAAGGAAATCAATCAA 58.237 29.630 0.00 0.00 0.00 2.57
1263 1384 7.384660 CCAAAATTCGTCAAAGGAAATCAATCA 59.615 33.333 0.00 0.00 0.00 2.57
1264 1385 7.622048 GCCAAAATTCGTCAAAGGAAATCAATC 60.622 37.037 0.00 0.00 0.00 2.67
1265 1386 6.147656 GCCAAAATTCGTCAAAGGAAATCAAT 59.852 34.615 0.00 0.00 0.00 2.57
1276 1400 1.287503 GCGGGCCAAAATTCGTCAA 59.712 52.632 4.39 0.00 0.00 3.18
1277 1401 2.958576 GCGGGCCAAAATTCGTCA 59.041 55.556 4.39 0.00 0.00 4.35
1278 1402 2.202427 CGCGGGCCAAAATTCGTC 60.202 61.111 4.39 0.00 0.00 4.20
1281 1405 2.202610 GAGCGCGGGCCAAAATTC 60.203 61.111 22.01 7.13 41.24 2.17
1306 1431 4.215742 TTCCCGGATAGCACGCGG 62.216 66.667 12.47 0.00 0.00 6.46
1320 1445 9.504793 TTCAGAAAGAAAACCGGGAAATGTTCC 62.505 40.741 6.32 0.00 40.28 3.62
1322 1447 4.647399 TCAGAAAGAAAACCGGGAAATGTT 59.353 37.500 6.32 0.00 0.00 2.71
1324 1449 4.846779 TCAGAAAGAAAACCGGGAAATG 57.153 40.909 6.32 0.00 0.00 2.32
1325 1450 5.538433 TCATTCAGAAAGAAAACCGGGAAAT 59.462 36.000 6.32 0.00 40.22 2.17
1335 1460 4.065088 CACGGACCTCATTCAGAAAGAAA 58.935 43.478 0.00 0.00 40.22 2.52
1374 1513 0.109532 TCAATGTGCTCACCGGGAAA 59.890 50.000 6.32 0.00 0.00 3.13
1384 1523 1.167851 CGGGTCAACATCAATGTGCT 58.832 50.000 0.00 0.00 41.61 4.40
1478 1653 2.972625 TCTAGGTTTGTCATCTTGCCG 58.027 47.619 0.00 0.00 0.00 5.69
1484 1659 4.806247 CGGTCATCTTCTAGGTTTGTCATC 59.194 45.833 0.00 0.00 0.00 2.92
1609 1788 0.673644 CCAAAGCGAGGGTGTAGGTG 60.674 60.000 0.00 0.00 0.00 4.00
1621 1800 5.673818 GCCTTGTAGAAAGAATACCAAAGCG 60.674 44.000 0.00 0.00 0.00 4.68
1649 1828 1.270826 GGTTTCTCTTTCCCAGCAAGC 59.729 52.381 0.00 0.00 0.00 4.01
1659 1838 4.942761 AATGTGCATGTGGTTTCTCTTT 57.057 36.364 0.00 0.00 0.00 2.52
1687 1870 5.253330 GGTAATTGAGATGAAAGGTGGACA 58.747 41.667 0.00 0.00 0.00 4.02
1696 1879 2.917933 CAGGCCGGTAATTGAGATGAA 58.082 47.619 1.90 0.00 0.00 2.57
1698 1881 0.947244 GCAGGCCGGTAATTGAGATG 59.053 55.000 1.90 0.00 0.00 2.90
1699 1882 0.839946 AGCAGGCCGGTAATTGAGAT 59.160 50.000 1.90 0.00 0.00 2.75
1700 1883 1.412710 CTAGCAGGCCGGTAATTGAGA 59.587 52.381 1.90 0.00 0.00 3.27
1701 1884 1.412710 TCTAGCAGGCCGGTAATTGAG 59.587 52.381 1.90 0.00 0.00 3.02
1704 1887 1.789523 TCTCTAGCAGGCCGGTAATT 58.210 50.000 1.90 0.00 0.00 1.40
1705 1888 1.789523 TTCTCTAGCAGGCCGGTAAT 58.210 50.000 1.90 0.00 0.00 1.89
1706 1889 1.789523 ATTCTCTAGCAGGCCGGTAA 58.210 50.000 1.90 0.00 0.00 2.85
1707 1890 1.789523 AATTCTCTAGCAGGCCGGTA 58.210 50.000 1.90 5.59 0.00 4.02
1708 1891 0.912486 AAATTCTCTAGCAGGCCGGT 59.088 50.000 1.90 4.60 0.00 5.28
1709 1892 2.044123 AAAATTCTCTAGCAGGCCGG 57.956 50.000 0.00 0.00 0.00 6.13
1733 1917 0.251634 GGAGAAGCTTGGTGAGAGGG 59.748 60.000 2.10 0.00 0.00 4.30
1735 1919 0.108424 CGGGAGAAGCTTGGTGAGAG 60.108 60.000 2.10 0.00 0.00 3.20
1736 1920 1.544825 CCGGGAGAAGCTTGGTGAGA 61.545 60.000 2.10 0.00 0.00 3.27
1743 1927 3.325135 CCATAATAGTCCGGGAGAAGCTT 59.675 47.826 0.00 0.00 0.00 3.74
1767 1951 1.880675 GCCTCCATTGATGCATCTCTG 59.119 52.381 26.32 21.13 32.92 3.35
1782 1967 2.818130 TTGTTGCTTTGATTGCCTCC 57.182 45.000 0.00 0.00 0.00 4.30
1783 1968 4.060205 ACATTTGTTGCTTTGATTGCCTC 58.940 39.130 0.00 0.00 0.00 4.70
1786 1971 4.084223 CCTCACATTTGTTGCTTTGATTGC 60.084 41.667 0.00 0.00 0.00 3.56
1807 1992 1.755179 CGGAGCAAATCATGAACCCT 58.245 50.000 0.00 0.00 0.00 4.34
1850 2035 9.736023 GATGGTGAGGATATGTATTTTGAAAAC 57.264 33.333 0.00 0.00 0.00 2.43
1855 2043 5.412594 CGGGATGGTGAGGATATGTATTTTG 59.587 44.000 0.00 0.00 0.00 2.44
1865 2053 1.285280 TTGAACGGGATGGTGAGGAT 58.715 50.000 0.00 0.00 0.00 3.24
1877 2065 1.784283 GGCAACACGAATTTTGAACGG 59.216 47.619 0.00 0.00 0.00 4.44
1878 2066 2.455032 TGGCAACACGAATTTTGAACG 58.545 42.857 0.00 0.00 46.17 3.95
1929 2124 5.588648 CGGAGCCTAAAATTTCTTCATGGTA 59.411 40.000 0.00 0.00 0.00 3.25
1956 2151 1.371389 GTGTCGACCACACGAGGAC 60.371 63.158 14.12 0.00 46.12 3.85
2044 2239 9.971922 CTCTGATTTATGTCTTGTTTTCCTTTT 57.028 29.630 0.00 0.00 0.00 2.27
2045 2240 9.136323 ACTCTGATTTATGTCTTGTTTTCCTTT 57.864 29.630 0.00 0.00 0.00 3.11
2046 2241 8.571336 CACTCTGATTTATGTCTTGTTTTCCTT 58.429 33.333 0.00 0.00 0.00 3.36
2047 2242 7.308830 GCACTCTGATTTATGTCTTGTTTTCCT 60.309 37.037 0.00 0.00 0.00 3.36
2048 2243 6.803807 GCACTCTGATTTATGTCTTGTTTTCC 59.196 38.462 0.00 0.00 0.00 3.13
2049 2244 7.588512 AGCACTCTGATTTATGTCTTGTTTTC 58.411 34.615 0.00 0.00 0.00 2.29
2050 2245 7.516198 AGCACTCTGATTTATGTCTTGTTTT 57.484 32.000 0.00 0.00 0.00 2.43
2059 2254 6.634436 GCGGAATTTAAGCACTCTGATTTATG 59.366 38.462 0.00 0.00 0.00 1.90
2065 2260 2.027192 AGGCGGAATTTAAGCACTCTGA 60.027 45.455 0.00 0.00 0.00 3.27
2069 2264 0.811281 GCAGGCGGAATTTAAGCACT 59.189 50.000 0.00 0.00 0.00 4.40
2070 2265 0.525761 TGCAGGCGGAATTTAAGCAC 59.474 50.000 0.00 0.00 0.00 4.40
2071 2266 0.810648 CTGCAGGCGGAATTTAAGCA 59.189 50.000 5.57 0.00 0.00 3.91
2072 2267 1.094785 TCTGCAGGCGGAATTTAAGC 58.905 50.000 15.13 0.00 0.00 3.09
2073 2268 1.401905 GGTCTGCAGGCGGAATTTAAG 59.598 52.381 15.13 0.00 32.55 1.85
2074 2269 1.271652 TGGTCTGCAGGCGGAATTTAA 60.272 47.619 15.13 0.00 32.55 1.52
2075 2270 0.326595 TGGTCTGCAGGCGGAATTTA 59.673 50.000 15.13 0.00 32.55 1.40
2076 2271 0.962356 CTGGTCTGCAGGCGGAATTT 60.962 55.000 15.13 0.00 32.55 1.82
2077 2272 1.377725 CTGGTCTGCAGGCGGAATT 60.378 57.895 15.13 0.00 32.55 2.17
2078 2273 2.270205 CTGGTCTGCAGGCGGAAT 59.730 61.111 15.13 0.00 32.55 3.01
2079 2274 4.704833 GCTGGTCTGCAGGCGGAA 62.705 66.667 15.13 0.00 32.55 4.30
2082 2277 4.994471 TGTGCTGGTCTGCAGGCG 62.994 66.667 15.13 0.59 44.20 5.52
2083 2278 2.360852 ATGTGCTGGTCTGCAGGC 60.361 61.111 15.13 13.00 44.20 4.85
2084 2279 0.322277 AAGATGTGCTGGTCTGCAGG 60.322 55.000 15.13 0.00 44.20 4.85
2085 2280 0.803117 CAAGATGTGCTGGTCTGCAG 59.197 55.000 7.63 7.63 44.20 4.41
2086 2281 0.109153 ACAAGATGTGCTGGTCTGCA 59.891 50.000 0.00 0.00 41.05 4.41
2087 2282 2.005451 CTACAAGATGTGCTGGTCTGC 58.995 52.381 0.00 0.00 31.63 4.26
2088 2283 2.625737 CCTACAAGATGTGCTGGTCTG 58.374 52.381 0.00 0.00 31.63 3.51
2100 2295 1.509463 CGTAGTGGCGCCTACAAGA 59.491 57.895 29.70 1.94 37.72 3.02
2140 2335 1.134521 TGATAGTCGTTGGATGTGGGC 60.135 52.381 0.00 0.00 0.00 5.36
2141 2336 2.168521 ACTGATAGTCGTTGGATGTGGG 59.831 50.000 0.00 0.00 0.00 4.61
2145 2340 7.596749 ACTTTTAACTGATAGTCGTTGGATG 57.403 36.000 0.00 0.00 0.00 3.51
2146 2341 7.876068 TGAACTTTTAACTGATAGTCGTTGGAT 59.124 33.333 0.00 0.00 0.00 3.41
2147 2342 7.211573 TGAACTTTTAACTGATAGTCGTTGGA 58.788 34.615 0.00 0.00 0.00 3.53
2148 2343 7.416154 TGAACTTTTAACTGATAGTCGTTGG 57.584 36.000 0.00 0.00 0.00 3.77
2150 2345 8.885722 TGTTTGAACTTTTAACTGATAGTCGTT 58.114 29.630 0.00 0.00 0.00 3.85
2167 2362 9.868277 CATCTCTAAGAGTATTCTGTTTGAACT 57.132 33.333 0.00 0.00 37.52 3.01
2168 2363 9.646427 ACATCTCTAAGAGTATTCTGTTTGAAC 57.354 33.333 0.00 0.00 37.52 3.18
2169 2364 9.645059 CACATCTCTAAGAGTATTCTGTTTGAA 57.355 33.333 0.00 0.00 39.24 2.69
2170 2365 8.253810 CCACATCTCTAAGAGTATTCTGTTTGA 58.746 37.037 0.00 0.00 32.79 2.69
2171 2366 7.010923 GCCACATCTCTAAGAGTATTCTGTTTG 59.989 40.741 0.00 0.00 32.79 2.93
2172 2367 7.044798 GCCACATCTCTAAGAGTATTCTGTTT 58.955 38.462 0.00 0.00 32.79 2.83
2173 2368 6.382570 AGCCACATCTCTAAGAGTATTCTGTT 59.617 38.462 0.00 0.00 32.79 3.16
2174 2369 5.896678 AGCCACATCTCTAAGAGTATTCTGT 59.103 40.000 0.00 0.00 32.79 3.41
2175 2370 6.403866 AGCCACATCTCTAAGAGTATTCTG 57.596 41.667 0.00 0.00 32.79 3.02
2176 2371 6.609212 TGAAGCCACATCTCTAAGAGTATTCT 59.391 38.462 0.00 0.00 34.29 2.40
2177 2372 6.699642 GTGAAGCCACATCTCTAAGAGTATTC 59.300 42.308 0.00 0.00 42.72 1.75
2178 2373 6.578023 GTGAAGCCACATCTCTAAGAGTATT 58.422 40.000 0.00 0.00 42.72 1.89
2179 2374 5.221145 CGTGAAGCCACATCTCTAAGAGTAT 60.221 44.000 0.00 0.00 43.34 2.12
2180 2375 4.096532 CGTGAAGCCACATCTCTAAGAGTA 59.903 45.833 0.00 0.00 43.34 2.59
2181 2376 3.119316 CGTGAAGCCACATCTCTAAGAGT 60.119 47.826 0.00 0.00 43.34 3.24
2182 2377 3.443037 CGTGAAGCCACATCTCTAAGAG 58.557 50.000 0.00 0.00 43.34 2.85
2183 2378 2.417379 GCGTGAAGCCACATCTCTAAGA 60.417 50.000 0.00 0.00 43.34 2.10
2184 2379 1.929836 GCGTGAAGCCACATCTCTAAG 59.070 52.381 0.00 0.00 43.34 2.18
2185 2380 2.010145 GCGTGAAGCCACATCTCTAA 57.990 50.000 0.00 0.00 43.34 2.10
2186 2381 3.741029 GCGTGAAGCCACATCTCTA 57.259 52.632 0.00 0.00 43.34 2.43
2187 2382 4.606071 GCGTGAAGCCACATCTCT 57.394 55.556 0.00 0.00 43.34 3.10
2227 2422 9.909043 AAACGTTGACATTTTTAATTTGTTAGC 57.091 25.926 0.00 0.00 0.00 3.09
2245 2440 5.006358 GCACTTTGACTCTTAGAAACGTTGA 59.994 40.000 0.00 0.00 0.00 3.18
2246 2441 5.198274 GCACTTTGACTCTTAGAAACGTTG 58.802 41.667 0.00 0.00 0.00 4.10
2249 2444 3.120991 CGGCACTTTGACTCTTAGAAACG 60.121 47.826 0.00 0.00 0.00 3.60
2274 2469 7.849026 GCGAATTTACTAATAGTTTTCATCGCA 59.151 33.333 22.60 0.00 0.00 5.10
2313 2508 4.080751 TGGTTGGCTGTCTTAGGTTATACC 60.081 45.833 0.00 0.00 38.99 2.73
2329 2524 2.432510 AGCTGACTCTATACTGGTTGGC 59.567 50.000 0.00 0.00 0.00 4.52
2348 2543 0.177604 ACCTATGAGCAGAGCACAGC 59.822 55.000 0.00 0.00 32.12 4.40
2350 2545 1.901833 TGAACCTATGAGCAGAGCACA 59.098 47.619 0.00 0.00 33.26 4.57
2356 2551 2.093288 TCCTTGCTGAACCTATGAGCAG 60.093 50.000 0.00 0.00 43.36 4.24
2480 2683 8.411318 TCTTTCTTTTTCAGCAATTTTCTGTC 57.589 30.769 4.84 0.00 33.48 3.51
2490 2693 8.928733 GCATGAAATATTCTTTCTTTTTCAGCA 58.071 29.630 0.00 0.00 39.04 4.41
2491 2694 8.928733 TGCATGAAATATTCTTTCTTTTTCAGC 58.071 29.630 0.00 0.00 39.04 4.26
2495 2698 9.729281 ACCATGCATGAAATATTCTTTCTTTTT 57.271 25.926 28.31 0.00 0.00 1.94
2496 2699 9.729281 AACCATGCATGAAATATTCTTTCTTTT 57.271 25.926 28.31 0.00 0.00 2.27
2497 2700 9.374838 GAACCATGCATGAAATATTCTTTCTTT 57.625 29.630 28.31 0.83 0.00 2.52
2498 2701 7.983484 GGAACCATGCATGAAATATTCTTTCTT 59.017 33.333 28.31 0.35 0.00 2.52
2500 2703 7.267128 TGGAACCATGCATGAAATATTCTTTC 58.733 34.615 28.31 13.52 0.00 2.62
2550 2756 4.142609 AGTACATGAATCGCCACTTGAT 57.857 40.909 0.00 0.00 0.00 2.57
2571 2777 6.691255 ACTAACCAACCATGAAAGGTACTA 57.309 37.500 0.00 0.00 42.25 1.82
2572 2778 5.578157 ACTAACCAACCATGAAAGGTACT 57.422 39.130 0.00 0.00 42.25 2.73
2573 2779 5.766174 TCAACTAACCAACCATGAAAGGTAC 59.234 40.000 0.00 0.00 42.25 3.34
2635 2845 0.173708 CGAGAAGGGACGGGAAGAAG 59.826 60.000 0.00 0.00 0.00 2.85
2674 2884 3.223661 CTTCTCGTTGAAGCAGCCT 57.776 52.632 7.68 0.00 44.62 4.58
2707 2917 2.551270 GACGCCAAGTGCAGTTCG 59.449 61.111 3.08 8.77 41.33 3.95
2740 2950 0.943673 TGTTGCTGAACCACATGACG 59.056 50.000 0.00 0.00 0.00 4.35
2762 2972 0.888736 TGCCCATGGTTCTTGTGACG 60.889 55.000 11.73 0.00 0.00 4.35
2851 3061 4.576463 GGCCATACCTTGTCATACTTCTTG 59.424 45.833 0.00 0.00 34.51 3.02
2997 3312 7.841956 TGCAAAGAGAGCTAGAACTTAATAGT 58.158 34.615 0.00 0.00 35.68 2.12
2998 3313 8.885494 ATGCAAAGAGAGCTAGAACTTAATAG 57.115 34.615 0.00 0.00 0.00 1.73
2999 3314 9.672673 AAATGCAAAGAGAGCTAGAACTTAATA 57.327 29.630 0.00 0.00 0.00 0.98
3002 3317 7.161404 TGAAATGCAAAGAGAGCTAGAACTTA 58.839 34.615 0.00 0.00 0.00 2.24
3005 3452 5.641209 TCTGAAATGCAAAGAGAGCTAGAAC 59.359 40.000 0.00 0.00 0.00 3.01
3007 3454 5.411831 TCTGAAATGCAAAGAGAGCTAGA 57.588 39.130 0.00 0.00 0.00 2.43
3008 3455 7.783090 TTATCTGAAATGCAAAGAGAGCTAG 57.217 36.000 0.00 0.00 0.00 3.42
3058 3505 8.922931 ATGCTTTTGGTCATTCCTTTTTAATT 57.077 26.923 0.00 0.00 37.07 1.40
3062 3509 8.815912 AGTATATGCTTTTGGTCATTCCTTTTT 58.184 29.630 0.00 0.00 37.07 1.94
3067 3514 6.514048 GCAGAGTATATGCTTTTGGTCATTCC 60.514 42.308 0.00 0.00 40.59 3.01
3084 3531 7.511959 TTCGAATAGTGTATCTGCAGAGTAT 57.488 36.000 22.96 8.11 0.00 2.12
3100 3547 3.118956 ACTCCTGTCCTTGCTTCGAATAG 60.119 47.826 0.00 0.00 0.00 1.73
3313 3760 2.481568 ACATGTCAAGCTGATGTCAACG 59.518 45.455 0.00 0.00 0.00 4.10
3352 3799 1.326852 GATGCATGTCAGAAGTGCGAG 59.673 52.381 2.46 0.00 41.61 5.03
3366 3813 9.434420 GCTAAATAGATCTTGTCTTAGATGCAT 57.566 33.333 0.00 0.00 38.42 3.96
3367 3814 8.424133 TGCTAAATAGATCTTGTCTTAGATGCA 58.576 33.333 0.00 0.00 38.42 3.96
3368 3815 8.824159 TGCTAAATAGATCTTGTCTTAGATGC 57.176 34.615 0.00 0.00 38.42 3.91
3395 3842 3.389687 GCGATTGAGAGAAAATTCGCA 57.610 42.857 9.90 0.00 43.61 5.10
3397 3844 4.551126 GTGTTGCGATTGAGAGAAAATTCG 59.449 41.667 0.00 0.00 0.00 3.34
3402 3849 2.807967 CTGGTGTTGCGATTGAGAGAAA 59.192 45.455 0.00 0.00 0.00 2.52
3407 3854 0.806868 ATGCTGGTGTTGCGATTGAG 59.193 50.000 0.00 0.00 0.00 3.02
3408 3855 1.737236 GTATGCTGGTGTTGCGATTGA 59.263 47.619 0.00 0.00 0.00 2.57
3410 3857 1.468520 GTGTATGCTGGTGTTGCGATT 59.531 47.619 0.00 0.00 0.00 3.34
3411 3858 1.086696 GTGTATGCTGGTGTTGCGAT 58.913 50.000 0.00 0.00 0.00 4.58
3412 3859 0.034756 AGTGTATGCTGGTGTTGCGA 59.965 50.000 0.00 0.00 0.00 5.10
3413 3860 0.166597 CAGTGTATGCTGGTGTTGCG 59.833 55.000 0.00 0.00 33.11 4.85
3423 3870 9.893305 GGTTGAAATAATATAACCAGTGTATGC 57.107 33.333 0.00 0.00 41.64 3.14
3432 3879 9.623000 ACCACTGTAGGTTGAAATAATATAACC 57.377 33.333 0.00 0.00 39.34 2.85
3448 3895 3.564225 GGAAAAGTTGTCACCACTGTAGG 59.436 47.826 0.00 0.00 0.00 3.18
3459 3906 2.545537 AGGGTCGAGGAAAAGTTGTC 57.454 50.000 0.00 0.00 0.00 3.18
3461 3908 2.949644 ACAAAGGGTCGAGGAAAAGTTG 59.050 45.455 0.00 0.00 0.00 3.16
3475 3922 9.541143 AGTTGTAAATTGAAACATTACAAAGGG 57.459 29.630 10.77 0.00 45.68 3.95
3485 3932 8.559536 TGCAAAAACAAGTTGTAAATTGAAACA 58.440 25.926 22.47 13.29 0.00 2.83
3496 3943 2.093711 GGGTCCTGCAAAAACAAGTTGT 60.094 45.455 1.64 1.64 0.00 3.32
3516 3963 1.665679 CGAGACCGGATCAAACATTGG 59.334 52.381 9.46 0.00 0.00 3.16
3530 3977 2.035442 GCCACAGGAAAGCGAGACC 61.035 63.158 0.00 0.00 0.00 3.85
3680 4127 0.611618 TCGGCTGGGCATTCACAAAT 60.612 50.000 0.00 0.00 0.00 2.32
3738 4185 0.950555 TCGTCCAAGTGCACAGCATC 60.951 55.000 21.04 5.50 41.91 3.91
3773 4220 3.640029 GGGTGTGCACTTACCTATAGCTA 59.360 47.826 21.85 0.00 37.15 3.32
3931 4387 0.038526 CCTTAGCCAGACGAACACGT 60.039 55.000 0.00 0.00 43.06 4.49
4033 4490 5.538053 TGCCAAATGAAGATCTAACCAACAA 59.462 36.000 0.00 0.00 0.00 2.83
4049 4506 8.077991 CCAACTATATTACAGTCATGCCAAATG 58.922 37.037 0.00 0.00 0.00 2.32
4123 4582 1.899142 GCCCCTTTTTACATCTTGGCA 59.101 47.619 0.00 0.00 37.58 4.92
4127 4586 5.130311 ACAAGTTTGCCCCTTTTTACATCTT 59.870 36.000 0.00 0.00 0.00 2.40
4202 4661 6.052360 GCTGAAAAATCCCAAACCTAAACAA 58.948 36.000 0.00 0.00 0.00 2.83
4208 4667 3.492482 CGTTGCTGAAAAATCCCAAACCT 60.492 43.478 0.00 0.00 0.00 3.50
4237 4696 1.007842 AGAACCCAAACCCAAACAGGT 59.992 47.619 0.00 0.00 44.00 4.00
4426 6883 5.811399 ATGTCAGTCAAAAGTTTCAACGA 57.189 34.783 0.00 0.00 0.00 3.85
4428 6885 7.250569 TCTCAATGTCAGTCAAAAGTTTCAAC 58.749 34.615 0.00 0.00 0.00 3.18
4502 6959 5.811399 TTATCTTGGTCGTTATTGCAAGG 57.189 39.130 4.94 0.00 0.00 3.61
4516 6973 5.812127 TCTGTGATCACGATGTTTATCTTGG 59.188 40.000 20.54 0.00 34.36 3.61
4527 6984 2.828520 AGTGAGGTTCTGTGATCACGAT 59.171 45.455 20.54 6.67 45.25 3.73
4529 6986 2.332104 CAGTGAGGTTCTGTGATCACG 58.668 52.381 20.54 14.91 45.25 4.35
4562 7019 3.609853 ACATTGCATGTACTACTGTGGG 58.390 45.455 0.00 0.00 42.78 4.61
4591 7048 6.727231 TGACCCTGTACCTCTTATTCTGTTAA 59.273 38.462 0.00 0.00 0.00 2.01
4594 7051 4.684724 TGACCCTGTACCTCTTATTCTGT 58.315 43.478 0.00 0.00 0.00 3.41
4595 7052 5.420409 GTTGACCCTGTACCTCTTATTCTG 58.580 45.833 0.00 0.00 0.00 3.02
4611 7068 3.326880 TGGAACTAAAGAGAGGTTGACCC 59.673 47.826 0.00 0.00 36.42 4.46
4671 7134 1.133407 GGTAGAGTTCTCTGCTCACCG 59.867 57.143 15.19 0.00 35.55 4.94
4672 7135 2.425668 GAGGTAGAGTTCTCTGCTCACC 59.574 54.545 15.19 12.52 35.92 4.02
4673 7136 3.352648 AGAGGTAGAGTTCTCTGCTCAC 58.647 50.000 15.19 5.27 38.75 3.51
4674 7137 3.730215 AGAGGTAGAGTTCTCTGCTCA 57.270 47.619 15.19 0.00 38.75 4.26
4675 7138 5.650703 AGTTTAGAGGTAGAGTTCTCTGCTC 59.349 44.000 15.19 11.28 40.24 4.26
4676 7139 5.576128 AGTTTAGAGGTAGAGTTCTCTGCT 58.424 41.667 15.19 8.76 40.24 4.24
4677 7140 5.907866 AGTTTAGAGGTAGAGTTCTCTGC 57.092 43.478 12.00 10.42 40.24 4.26
4678 7141 7.175990 AGACAAGTTTAGAGGTAGAGTTCTCTG 59.824 40.741 12.00 0.00 40.24 3.35
4679 7142 7.235804 AGACAAGTTTAGAGGTAGAGTTCTCT 58.764 38.462 7.50 7.50 42.37 3.10
4680 7143 7.457024 AGACAAGTTTAGAGGTAGAGTTCTC 57.543 40.000 0.00 0.00 0.00 2.87
4683 7146 8.578151 CAGTAAGACAAGTTTAGAGGTAGAGTT 58.422 37.037 0.00 0.00 0.00 3.01
4740 7203 9.217278 CATCTAGGATCTGATTTTGGTAGAATG 57.783 37.037 0.00 0.00 0.00 2.67
4812 7275 6.040955 TGTGGTGATTATAAGCTCTAGGAGTG 59.959 42.308 1.93 0.00 31.39 3.51
4842 7305 0.878523 TTCTCGGCCGTCAACAACTG 60.879 55.000 27.15 5.41 0.00 3.16
4853 7316 1.854227 CGAGGAAGTATTTCTCGGCC 58.146 55.000 11.55 0.00 33.88 6.13
4937 7400 9.762933 GAGATTAAGAGCTGATTAAGAATGACT 57.237 33.333 0.00 0.00 0.00 3.41
4939 7402 9.761504 CTGAGATTAAGAGCTGATTAAGAATGA 57.238 33.333 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.