Multiple sequence alignment - TraesCS2A01G108300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G108300 chr2A 100.000 3221 0 0 1 3221 60196811 60193591 0.000000e+00 5949.0
1 TraesCS2A01G108300 chr2A 98.573 2452 28 3 1 2445 60610837 60608386 0.000000e+00 4327.0
2 TraesCS2A01G108300 chr2A 91.166 566 50 0 1641 2206 60176970 60176405 0.000000e+00 769.0
3 TraesCS2A01G108300 chr2A 96.910 356 11 0 2349 2704 60608181 60607826 5.950000e-167 597.0
4 TraesCS2A01G108300 chr2A 74.941 1261 214 54 998 2175 60101039 60099798 4.830000e-133 484.0
5 TraesCS2A01G108300 chr2A 89.489 333 7 2 2199 2503 60175890 60175558 2.330000e-106 396.0
6 TraesCS2A01G108300 chr2A 77.217 575 108 13 1632 2202 59724446 59725001 6.710000e-82 315.0
7 TraesCS2A01G108300 chr2A 93.567 171 9 2 1039 1208 59587358 59587527 1.480000e-63 254.0
8 TraesCS2A01G108300 chr2A 89.326 178 17 1 1040 1217 59880704 59880529 4.180000e-54 222.0
9 TraesCS2A01G108300 chr2A 88.764 178 18 1 1040 1217 59943376 59943201 1.950000e-52 217.0
10 TraesCS2A01G108300 chr2A 83.857 223 28 8 1000 1218 60711808 60711590 4.210000e-49 206.0
11 TraesCS2A01G108300 chr2A 80.660 212 29 9 2 207 60101947 60101742 1.550000e-33 154.0
12 TraesCS2A01G108300 chr2A 92.308 65 4 1 1471 1535 60283360 60283297 1.230000e-14 91.6
13 TraesCS2A01G108300 chr2A 93.548 62 3 1 1474 1535 735350853 735350793 1.230000e-14 91.6
14 TraesCS2A01G108300 chr2B 90.347 2020 121 36 545 2518 94203867 94201876 0.000000e+00 2582.0
15 TraesCS2A01G108300 chr2B 76.802 1401 212 64 892 2226 93934719 93933366 0.000000e+00 682.0
16 TraesCS2A01G108300 chr2B 78.374 578 96 20 1634 2204 94224400 94223845 6.610000e-92 348.0
17 TraesCS2A01G108300 chr2B 77.526 574 108 11 1632 2202 93112563 93113118 3.100000e-85 326.0
18 TraesCS2A01G108300 chr2B 93.258 178 10 2 2560 2736 94201880 94201704 8.860000e-66 261.0
19 TraesCS2A01G108300 chr2B 77.045 440 80 14 1765 2202 93441240 93441660 1.930000e-57 233.0
20 TraesCS2A01G108300 chr2B 81.308 321 22 13 232 515 94204588 94204269 3.230000e-55 226.0
21 TraesCS2A01G108300 chr2D 76.331 1390 229 49 897 2226 60108898 60107549 0.000000e+00 652.0
22 TraesCS2A01G108300 chr2D 77.565 575 106 13 1632 2202 59727695 59728250 3.100000e-85 326.0
23 TraesCS2A01G108300 chr2D 79.939 329 43 13 380 686 60109332 60109005 1.500000e-53 220.0
24 TraesCS2A01G108300 chr2D 88.764 178 18 1 1040 1217 60023201 60023026 1.950000e-52 217.0
25 TraesCS2A01G108300 chr2D 83.173 208 27 7 2 207 60110131 60109930 1.970000e-42 183.0
26 TraesCS2A01G108300 chr2D 77.889 199 29 5 1326 1524 59658164 59658347 3.400000e-20 110.0
27 TraesCS2A01G108300 chr2D 100.000 55 0 0 1470 1524 60078916 60078862 5.680000e-18 102.0
28 TraesCS2A01G108300 chr2D 93.846 65 3 1 1471 1535 60166850 60166787 2.640000e-16 97.1
29 TraesCS2A01G108300 chr5A 79.206 630 98 16 1640 2259 704015618 704015012 1.080000e-109 407.0
30 TraesCS2A01G108300 chr5A 79.048 630 99 16 1640 2259 704099422 704098816 5.010000e-108 401.0
31 TraesCS2A01G108300 chr5A 79.048 630 99 16 1640 2259 704260216 704259610 5.010000e-108 401.0
32 TraesCS2A01G108300 chrUn 80.000 565 94 9 1640 2202 109057222 109057769 1.800000e-107 399.0
33 TraesCS2A01G108300 chrUn 80.000 535 43 26 1000 1528 109056647 109057123 1.430000e-88 337.0
34 TraesCS2A01G108300 chr1A 78.631 599 112 10 1635 2226 299267823 299268412 1.810000e-102 383.0
35 TraesCS2A01G108300 chr1A 78.882 483 65 25 897 1353 299261398 299261869 3.140000e-75 292.0
36 TraesCS2A01G108300 chr1A 88.889 81 6 3 1448 1528 299267495 299267572 2.640000e-16 97.1
37 TraesCS2A01G108300 chr4B 78.583 607 108 13 1600 2204 664052235 664052821 6.520000e-102 381.0
38 TraesCS2A01G108300 chr4B 79.702 537 47 21 998 1528 664051602 664052082 6.660000e-87 331.0
39 TraesCS2A01G108300 chr1D 77.093 681 92 34 897 1528 247867902 247867237 5.150000e-88 335.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G108300 chr2A 60193591 60196811 3220 True 5949.000000 5949 100.000000 1 3221 1 chr2A.!!$R3 3220
1 TraesCS2A01G108300 chr2A 60607826 60610837 3011 True 2462.000000 4327 97.741500 1 2704 2 chr2A.!!$R9 2703
2 TraesCS2A01G108300 chr2A 60175558 60176970 1412 True 582.500000 769 90.327500 1641 2503 2 chr2A.!!$R8 862
3 TraesCS2A01G108300 chr2A 60099798 60101947 2149 True 319.000000 484 77.800500 2 2175 2 chr2A.!!$R7 2173
4 TraesCS2A01G108300 chr2A 59724446 59725001 555 False 315.000000 315 77.217000 1632 2202 1 chr2A.!!$F2 570
5 TraesCS2A01G108300 chr2B 94201704 94204588 2884 True 1023.000000 2582 88.304333 232 2736 3 chr2B.!!$R3 2504
6 TraesCS2A01G108300 chr2B 93933366 93934719 1353 True 682.000000 682 76.802000 892 2226 1 chr2B.!!$R1 1334
7 TraesCS2A01G108300 chr2B 94223845 94224400 555 True 348.000000 348 78.374000 1634 2204 1 chr2B.!!$R2 570
8 TraesCS2A01G108300 chr2B 93112563 93113118 555 False 326.000000 326 77.526000 1632 2202 1 chr2B.!!$F1 570
9 TraesCS2A01G108300 chr2D 60107549 60110131 2582 True 351.666667 652 79.814333 2 2226 3 chr2D.!!$R4 2224
10 TraesCS2A01G108300 chr2D 59727695 59728250 555 False 326.000000 326 77.565000 1632 2202 1 chr2D.!!$F2 570
11 TraesCS2A01G108300 chr5A 704015012 704015618 606 True 407.000000 407 79.206000 1640 2259 1 chr5A.!!$R1 619
12 TraesCS2A01G108300 chr5A 704098816 704099422 606 True 401.000000 401 79.048000 1640 2259 1 chr5A.!!$R2 619
13 TraesCS2A01G108300 chr5A 704259610 704260216 606 True 401.000000 401 79.048000 1640 2259 1 chr5A.!!$R3 619
14 TraesCS2A01G108300 chrUn 109056647 109057769 1122 False 368.000000 399 80.000000 1000 2202 2 chrUn.!!$F1 1202
15 TraesCS2A01G108300 chr1A 299267495 299268412 917 False 240.050000 383 83.760000 1448 2226 2 chr1A.!!$F2 778
16 TraesCS2A01G108300 chr4B 664051602 664052821 1219 False 356.000000 381 79.142500 998 2204 2 chr4B.!!$F1 1206
17 TraesCS2A01G108300 chr1D 247867237 247867902 665 True 335.000000 335 77.093000 897 1528 1 chr1D.!!$R1 631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
230 237 2.833943 TGGAGATGCTCTTAGAACTGCA 59.166 45.455 0.0 0.0 39.83 4.41 F
2022 3359 0.768221 ACCTCCAGCTCAACAAGGGA 60.768 55.000 0.0 0.0 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2130 3470 0.179009 CCATCTTCACCATGGCCGAT 60.179 55.0 13.04 5.76 34.59 4.18 R
3200 5406 0.038067 CATGTGTGTGGCCCATTGTG 60.038 55.0 0.00 0.00 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
230 237 2.833943 TGGAGATGCTCTTAGAACTGCA 59.166 45.455 0.00 0.00 39.83 4.41
2022 3359 0.768221 ACCTCCAGCTCAACAAGGGA 60.768 55.000 0.00 0.00 0.00 4.20
2130 3470 1.959226 GTTCAGGAACGCCTTCGCA 60.959 57.895 0.00 0.00 43.90 5.10
2629 4835 1.921982 TTTGTGCATGGCTGTATGGT 58.078 45.000 0.00 0.00 0.00 3.55
2785 4991 6.651755 CCATTTGGTTTGAGTAATCAATGC 57.348 37.500 6.42 3.25 36.75 3.56
2786 4992 6.400568 CCATTTGGTTTGAGTAATCAATGCT 58.599 36.000 6.42 0.00 36.75 3.79
2787 4993 6.532657 CCATTTGGTTTGAGTAATCAATGCTC 59.467 38.462 6.42 0.00 36.75 4.26
2796 5002 6.877236 TGAGTAATCAATGCTCATCTACACA 58.123 36.000 0.00 0.00 44.59 3.72
2797 5003 6.758416 TGAGTAATCAATGCTCATCTACACAC 59.242 38.462 0.00 0.00 44.59 3.82
2798 5004 6.882656 AGTAATCAATGCTCATCTACACACT 58.117 36.000 0.00 0.00 0.00 3.55
2799 5005 7.334090 AGTAATCAATGCTCATCTACACACTT 58.666 34.615 0.00 0.00 0.00 3.16
2800 5006 6.674694 AATCAATGCTCATCTACACACTTC 57.325 37.500 0.00 0.00 0.00 3.01
2801 5007 5.411831 TCAATGCTCATCTACACACTTCT 57.588 39.130 0.00 0.00 0.00 2.85
2802 5008 5.798132 TCAATGCTCATCTACACACTTCTT 58.202 37.500 0.00 0.00 0.00 2.52
2803 5009 6.233434 TCAATGCTCATCTACACACTTCTTT 58.767 36.000 0.00 0.00 0.00 2.52
2804 5010 6.148315 TCAATGCTCATCTACACACTTCTTTG 59.852 38.462 0.00 0.00 0.00 2.77
2805 5011 4.960938 TGCTCATCTACACACTTCTTTGT 58.039 39.130 0.00 0.00 0.00 2.83
2806 5012 4.991056 TGCTCATCTACACACTTCTTTGTC 59.009 41.667 0.00 0.00 0.00 3.18
2807 5013 4.090642 GCTCATCTACACACTTCTTTGTCG 59.909 45.833 0.00 0.00 0.00 4.35
2808 5014 4.556233 TCATCTACACACTTCTTTGTCGG 58.444 43.478 0.00 0.00 0.00 4.79
2809 5015 4.038763 TCATCTACACACTTCTTTGTCGGT 59.961 41.667 0.00 0.00 0.00 4.69
2810 5016 3.713288 TCTACACACTTCTTTGTCGGTG 58.287 45.455 0.00 0.00 35.99 4.94
2811 5017 1.014352 ACACACTTCTTTGTCGGTGC 58.986 50.000 0.00 0.00 33.53 5.01
2812 5018 1.013596 CACACTTCTTTGTCGGTGCA 58.986 50.000 0.00 0.00 33.53 4.57
2813 5019 1.603802 CACACTTCTTTGTCGGTGCAT 59.396 47.619 0.00 0.00 33.53 3.96
2814 5020 1.603802 ACACTTCTTTGTCGGTGCATG 59.396 47.619 0.00 0.00 33.53 4.06
2815 5021 0.593128 ACTTCTTTGTCGGTGCATGC 59.407 50.000 11.82 11.82 0.00 4.06
2816 5022 0.877071 CTTCTTTGTCGGTGCATGCT 59.123 50.000 20.33 0.00 0.00 3.79
2817 5023 0.592637 TTCTTTGTCGGTGCATGCTG 59.407 50.000 20.33 9.00 0.00 4.41
2818 5024 1.210931 CTTTGTCGGTGCATGCTGG 59.789 57.895 20.33 8.03 0.00 4.85
2819 5025 1.518056 CTTTGTCGGTGCATGCTGGT 61.518 55.000 20.33 0.00 0.00 4.00
2820 5026 1.794151 TTTGTCGGTGCATGCTGGTG 61.794 55.000 20.33 6.36 0.00 4.17
2821 5027 2.669569 GTCGGTGCATGCTGGTGT 60.670 61.111 20.33 0.00 0.00 4.16
2822 5028 2.358615 TCGGTGCATGCTGGTGTC 60.359 61.111 20.33 2.51 0.00 3.67
2823 5029 2.359107 CGGTGCATGCTGGTGTCT 60.359 61.111 20.33 0.00 0.00 3.41
2824 5030 1.079197 CGGTGCATGCTGGTGTCTA 60.079 57.895 20.33 0.00 0.00 2.59
2825 5031 0.673333 CGGTGCATGCTGGTGTCTAA 60.673 55.000 20.33 0.00 0.00 2.10
2826 5032 1.755179 GGTGCATGCTGGTGTCTAAT 58.245 50.000 20.33 0.00 0.00 1.73
2827 5033 1.672881 GGTGCATGCTGGTGTCTAATC 59.327 52.381 20.33 0.00 0.00 1.75
2828 5034 2.358957 GTGCATGCTGGTGTCTAATCA 58.641 47.619 20.33 0.00 0.00 2.57
2829 5035 2.096496 GTGCATGCTGGTGTCTAATCAC 59.904 50.000 20.33 0.00 37.57 3.06
2830 5036 2.026915 TGCATGCTGGTGTCTAATCACT 60.027 45.455 20.33 0.00 38.28 3.41
2831 5037 2.611292 GCATGCTGGTGTCTAATCACTC 59.389 50.000 11.37 0.00 38.28 3.51
2832 5038 3.865446 CATGCTGGTGTCTAATCACTCA 58.135 45.455 0.00 0.00 38.28 3.41
2833 5039 4.256110 CATGCTGGTGTCTAATCACTCAA 58.744 43.478 0.00 0.00 38.28 3.02
2834 5040 4.350368 TGCTGGTGTCTAATCACTCAAA 57.650 40.909 0.00 0.00 38.28 2.69
2835 5041 4.065088 TGCTGGTGTCTAATCACTCAAAC 58.935 43.478 0.00 0.00 38.28 2.93
2836 5042 3.437049 GCTGGTGTCTAATCACTCAAACC 59.563 47.826 0.00 0.00 38.28 3.27
2837 5043 4.641396 CTGGTGTCTAATCACTCAAACCA 58.359 43.478 0.00 0.00 38.28 3.67
2838 5044 5.241403 TGGTGTCTAATCACTCAAACCAT 57.759 39.130 0.00 0.00 38.28 3.55
2839 5045 5.630121 TGGTGTCTAATCACTCAAACCATT 58.370 37.500 0.00 0.00 38.28 3.16
2840 5046 6.068010 TGGTGTCTAATCACTCAAACCATTT 58.932 36.000 0.00 0.00 38.28 2.32
2841 5047 6.549364 TGGTGTCTAATCACTCAAACCATTTT 59.451 34.615 0.00 0.00 38.28 1.82
2842 5048 7.721842 TGGTGTCTAATCACTCAAACCATTTTA 59.278 33.333 0.00 0.00 38.28 1.52
2843 5049 8.739972 GGTGTCTAATCACTCAAACCATTTTAT 58.260 33.333 0.00 0.00 38.28 1.40
2850 5056 9.612066 AATCACTCAAACCATTTTATTTTGTGT 57.388 25.926 0.00 0.00 37.40 3.72
2855 5061 9.810231 CTCAAACCATTTTATTTTGTGTATTGC 57.190 29.630 0.00 0.00 32.96 3.56
2856 5062 8.778358 TCAAACCATTTTATTTTGTGTATTGCC 58.222 29.630 0.00 0.00 32.96 4.52
2857 5063 8.562892 CAAACCATTTTATTTTGTGTATTGCCA 58.437 29.630 0.00 0.00 0.00 4.92
2858 5064 7.665561 ACCATTTTATTTTGTGTATTGCCAC 57.334 32.000 0.00 0.00 35.86 5.01
2859 5065 7.449247 ACCATTTTATTTTGTGTATTGCCACT 58.551 30.769 0.00 0.00 36.30 4.00
2860 5066 8.589338 ACCATTTTATTTTGTGTATTGCCACTA 58.411 29.630 0.00 0.00 36.30 2.74
2861 5067 9.429359 CCATTTTATTTTGTGTATTGCCACTAA 57.571 29.630 0.00 0.00 36.30 2.24
2868 5074 9.777297 ATTTTGTGTATTGCCACTAAGAAATTT 57.223 25.926 0.00 0.00 36.30 1.82
2869 5075 9.606631 TTTTGTGTATTGCCACTAAGAAATTTT 57.393 25.926 0.00 0.00 36.30 1.82
2870 5076 8.586570 TTGTGTATTGCCACTAAGAAATTTTG 57.413 30.769 0.00 0.00 36.30 2.44
2871 5077 7.721402 TGTGTATTGCCACTAAGAAATTTTGT 58.279 30.769 0.00 0.00 36.30 2.83
2872 5078 8.851145 TGTGTATTGCCACTAAGAAATTTTGTA 58.149 29.630 0.00 0.00 36.30 2.41
2873 5079 9.855021 GTGTATTGCCACTAAGAAATTTTGTAT 57.145 29.630 0.00 0.00 32.50 2.29
2877 5083 8.925161 TTGCCACTAAGAAATTTTGTATATGC 57.075 30.769 0.00 0.00 0.00 3.14
2878 5084 8.292444 TGCCACTAAGAAATTTTGTATATGCT 57.708 30.769 0.00 0.00 0.00 3.79
2879 5085 8.190122 TGCCACTAAGAAATTTTGTATATGCTG 58.810 33.333 0.00 0.00 0.00 4.41
2880 5086 8.405531 GCCACTAAGAAATTTTGTATATGCTGA 58.594 33.333 0.00 0.00 0.00 4.26
2881 5087 9.722056 CCACTAAGAAATTTTGTATATGCTGAC 57.278 33.333 0.00 0.00 0.00 3.51
2887 5093 9.672673 AGAAATTTTGTATATGCTGACAGTACT 57.327 29.630 3.99 0.00 0.00 2.73
2893 5099 9.884636 TTTGTATATGCTGACAGTACTAATTGT 57.115 29.630 3.99 0.00 0.00 2.71
2894 5100 9.529325 TTGTATATGCTGACAGTACTAATTGTC 57.471 33.333 3.99 0.04 41.44 3.18
2895 5101 8.914011 TGTATATGCTGACAGTACTAATTGTCT 58.086 33.333 12.56 0.00 41.58 3.41
2898 5104 6.584185 TGCTGACAGTACTAATTGTCTACA 57.416 37.500 12.56 8.61 41.58 2.74
2899 5105 6.387465 TGCTGACAGTACTAATTGTCTACAC 58.613 40.000 12.56 2.96 41.58 2.90
2900 5106 6.015772 TGCTGACAGTACTAATTGTCTACACA 60.016 38.462 12.56 4.90 41.58 3.72
2901 5107 6.866770 GCTGACAGTACTAATTGTCTACACAA 59.133 38.462 12.56 0.00 46.71 3.33
2902 5108 7.148787 GCTGACAGTACTAATTGTCTACACAAC 60.149 40.741 12.56 0.00 45.47 3.32
2903 5109 7.718525 TGACAGTACTAATTGTCTACACAACA 58.281 34.615 12.56 0.00 45.47 3.33
2904 5110 8.364894 TGACAGTACTAATTGTCTACACAACAT 58.635 33.333 12.56 0.00 45.47 2.71
2905 5111 9.850628 GACAGTACTAATTGTCTACACAACATA 57.149 33.333 0.00 0.00 45.47 2.29
2911 5117 9.383519 ACTAATTGTCTACACAACATAAGATGG 57.616 33.333 0.00 0.00 45.47 3.51
2912 5118 9.383519 CTAATTGTCTACACAACATAAGATGGT 57.616 33.333 0.00 0.00 45.47 3.55
2914 5120 9.733556 AATTGTCTACACAACATAAGATGGTAA 57.266 29.630 0.00 0.00 45.47 2.85
2915 5121 8.542497 TTGTCTACACAACATAAGATGGTAAC 57.458 34.615 0.00 0.00 37.61 2.50
2916 5122 8.151596 TTGTCTACACAACATAAGATGGTAACA 58.848 33.333 0.00 0.00 44.79 2.41
2942 5148 8.994429 ATAATTCTTCTATAGTGCTCCATTCG 57.006 34.615 0.00 0.00 0.00 3.34
2943 5149 5.854010 TTCTTCTATAGTGCTCCATTCGT 57.146 39.130 0.00 0.00 0.00 3.85
2944 5150 5.188327 TCTTCTATAGTGCTCCATTCGTG 57.812 43.478 0.00 0.00 0.00 4.35
2945 5151 4.645136 TCTTCTATAGTGCTCCATTCGTGT 59.355 41.667 0.00 0.00 0.00 4.49
2946 5152 5.826208 TCTTCTATAGTGCTCCATTCGTGTA 59.174 40.000 0.00 0.00 0.00 2.90
2947 5153 6.490381 TCTTCTATAGTGCTCCATTCGTGTAT 59.510 38.462 0.00 0.00 0.00 2.29
2948 5154 6.255596 TCTATAGTGCTCCATTCGTGTATC 57.744 41.667 0.00 0.00 0.00 2.24
2949 5155 6.004574 TCTATAGTGCTCCATTCGTGTATCT 58.995 40.000 0.00 0.00 0.00 1.98
2950 5156 7.166167 TCTATAGTGCTCCATTCGTGTATCTA 58.834 38.462 0.00 0.00 0.00 1.98
2951 5157 6.842437 ATAGTGCTCCATTCGTGTATCTAT 57.158 37.500 0.00 0.00 0.00 1.98
2952 5158 5.127693 AGTGCTCCATTCGTGTATCTATC 57.872 43.478 0.00 0.00 0.00 2.08
2953 5159 4.021894 AGTGCTCCATTCGTGTATCTATCC 60.022 45.833 0.00 0.00 0.00 2.59
2954 5160 3.895041 TGCTCCATTCGTGTATCTATCCA 59.105 43.478 0.00 0.00 0.00 3.41
2955 5161 4.528206 TGCTCCATTCGTGTATCTATCCAT 59.472 41.667 0.00 0.00 0.00 3.41
2956 5162 5.012046 TGCTCCATTCGTGTATCTATCCATT 59.988 40.000 0.00 0.00 0.00 3.16
2957 5163 5.934625 GCTCCATTCGTGTATCTATCCATTT 59.065 40.000 0.00 0.00 0.00 2.32
2958 5164 6.091441 GCTCCATTCGTGTATCTATCCATTTC 59.909 42.308 0.00 0.00 0.00 2.17
2959 5165 7.061566 TCCATTCGTGTATCTATCCATTTCA 57.938 36.000 0.00 0.00 0.00 2.69
2960 5166 7.679783 TCCATTCGTGTATCTATCCATTTCAT 58.320 34.615 0.00 0.00 0.00 2.57
2961 5167 8.156820 TCCATTCGTGTATCTATCCATTTCATT 58.843 33.333 0.00 0.00 0.00 2.57
2962 5168 8.786898 CCATTCGTGTATCTATCCATTTCATTT 58.213 33.333 0.00 0.00 0.00 2.32
2989 5195 9.866655 ATTTAGTATTGGTGTATGTGATGGAAT 57.133 29.630 0.00 0.00 0.00 3.01
2990 5196 8.675705 TTAGTATTGGTGTATGTGATGGAATG 57.324 34.615 0.00 0.00 0.00 2.67
2991 5197 6.662755 AGTATTGGTGTATGTGATGGAATGT 58.337 36.000 0.00 0.00 0.00 2.71
2992 5198 7.118723 AGTATTGGTGTATGTGATGGAATGTT 58.881 34.615 0.00 0.00 0.00 2.71
2993 5199 5.895636 TTGGTGTATGTGATGGAATGTTC 57.104 39.130 0.00 0.00 0.00 3.18
2994 5200 5.178096 TGGTGTATGTGATGGAATGTTCT 57.822 39.130 0.00 0.00 0.00 3.01
2995 5201 5.569355 TGGTGTATGTGATGGAATGTTCTT 58.431 37.500 0.00 0.00 0.00 2.52
2996 5202 6.009589 TGGTGTATGTGATGGAATGTTCTTT 58.990 36.000 0.00 0.00 0.00 2.52
2997 5203 6.493115 TGGTGTATGTGATGGAATGTTCTTTT 59.507 34.615 0.00 0.00 0.00 2.27
2998 5204 6.808212 GGTGTATGTGATGGAATGTTCTTTTG 59.192 38.462 0.00 0.00 0.00 2.44
2999 5205 7.370383 GTGTATGTGATGGAATGTTCTTTTGT 58.630 34.615 0.00 0.00 0.00 2.83
3000 5206 7.326789 GTGTATGTGATGGAATGTTCTTTTGTG 59.673 37.037 0.00 0.00 0.00 3.33
3001 5207 5.850557 TGTGATGGAATGTTCTTTTGTGT 57.149 34.783 0.00 0.00 0.00 3.72
3002 5208 5.590145 TGTGATGGAATGTTCTTTTGTGTG 58.410 37.500 0.00 0.00 0.00 3.82
3003 5209 4.445385 GTGATGGAATGTTCTTTTGTGTGC 59.555 41.667 0.00 0.00 0.00 4.57
3004 5210 4.099113 TGATGGAATGTTCTTTTGTGTGCA 59.901 37.500 0.00 0.00 0.00 4.57
3005 5211 4.462508 TGGAATGTTCTTTTGTGTGCAA 57.537 36.364 0.00 0.00 0.00 4.08
3006 5212 5.021033 TGGAATGTTCTTTTGTGTGCAAT 57.979 34.783 0.00 0.00 34.18 3.56
3007 5213 5.426504 TGGAATGTTCTTTTGTGTGCAATT 58.573 33.333 0.00 0.00 34.18 2.32
3008 5214 6.577103 TGGAATGTTCTTTTGTGTGCAATTA 58.423 32.000 0.00 0.00 34.18 1.40
3009 5215 7.215789 TGGAATGTTCTTTTGTGTGCAATTAT 58.784 30.769 0.00 0.00 34.18 1.28
3010 5216 7.171167 TGGAATGTTCTTTTGTGTGCAATTATG 59.829 33.333 0.00 0.00 34.18 1.90
3011 5217 7.384660 GGAATGTTCTTTTGTGTGCAATTATGA 59.615 33.333 0.00 0.00 34.18 2.15
3012 5218 7.642071 ATGTTCTTTTGTGTGCAATTATGAC 57.358 32.000 0.00 0.00 34.18 3.06
3013 5219 5.685068 TGTTCTTTTGTGTGCAATTATGACG 59.315 36.000 0.00 0.00 34.18 4.35
3014 5220 5.681337 TCTTTTGTGTGCAATTATGACGA 57.319 34.783 0.00 0.00 34.18 4.20
3015 5221 5.448438 TCTTTTGTGTGCAATTATGACGAC 58.552 37.500 0.00 0.00 34.18 4.34
3016 5222 5.238432 TCTTTTGTGTGCAATTATGACGACT 59.762 36.000 0.00 0.00 34.18 4.18
3017 5223 4.661993 TTGTGTGCAATTATGACGACTC 57.338 40.909 0.00 0.00 0.00 3.36
3018 5224 3.925379 TGTGTGCAATTATGACGACTCT 58.075 40.909 0.00 0.00 0.00 3.24
3019 5225 5.066968 TGTGTGCAATTATGACGACTCTA 57.933 39.130 0.00 0.00 0.00 2.43
3020 5226 5.102313 TGTGTGCAATTATGACGACTCTAG 58.898 41.667 0.00 0.00 0.00 2.43
3021 5227 4.504461 GTGTGCAATTATGACGACTCTAGG 59.496 45.833 0.00 0.00 0.00 3.02
3022 5228 3.491267 GTGCAATTATGACGACTCTAGGC 59.509 47.826 0.00 0.00 0.00 3.93
3023 5229 3.060602 GCAATTATGACGACTCTAGGCC 58.939 50.000 0.00 0.00 0.00 5.19
3024 5230 3.309388 CAATTATGACGACTCTAGGCCG 58.691 50.000 0.00 0.00 0.00 6.13
3025 5231 2.048444 TTATGACGACTCTAGGCCGT 57.952 50.000 0.00 5.03 39.41 5.68
3026 5232 1.306148 TATGACGACTCTAGGCCGTG 58.694 55.000 0.00 0.00 36.60 4.94
3027 5233 0.680280 ATGACGACTCTAGGCCGTGT 60.680 55.000 0.00 0.00 36.60 4.49
3028 5234 0.892358 TGACGACTCTAGGCCGTGTT 60.892 55.000 0.00 0.00 36.60 3.32
3029 5235 0.456312 GACGACTCTAGGCCGTGTTG 60.456 60.000 0.00 1.62 36.60 3.33
3030 5236 1.177256 ACGACTCTAGGCCGTGTTGT 61.177 55.000 0.00 2.29 35.02 3.32
3031 5237 0.038526 CGACTCTAGGCCGTGTTGTT 60.039 55.000 0.00 0.00 0.00 2.83
3032 5238 1.604693 CGACTCTAGGCCGTGTTGTTT 60.605 52.381 0.00 0.00 0.00 2.83
3033 5239 2.490991 GACTCTAGGCCGTGTTGTTTT 58.509 47.619 0.00 0.00 0.00 2.43
3034 5240 2.479275 GACTCTAGGCCGTGTTGTTTTC 59.521 50.000 0.00 0.00 0.00 2.29
3035 5241 1.459592 CTCTAGGCCGTGTTGTTTTCG 59.540 52.381 0.00 0.00 0.00 3.46
3036 5242 1.068895 TCTAGGCCGTGTTGTTTTCGA 59.931 47.619 0.00 0.00 0.00 3.71
3037 5243 2.073816 CTAGGCCGTGTTGTTTTCGAT 58.926 47.619 0.00 0.00 0.00 3.59
3038 5244 2.172851 AGGCCGTGTTGTTTTCGATA 57.827 45.000 0.00 0.00 0.00 2.92
3039 5245 2.706890 AGGCCGTGTTGTTTTCGATAT 58.293 42.857 0.00 0.00 0.00 1.63
3040 5246 2.418628 AGGCCGTGTTGTTTTCGATATG 59.581 45.455 0.00 0.00 0.00 1.78
3041 5247 2.417239 GGCCGTGTTGTTTTCGATATGA 59.583 45.455 0.00 0.00 0.00 2.15
3042 5248 3.120130 GGCCGTGTTGTTTTCGATATGAA 60.120 43.478 0.00 0.00 33.85 2.57
3043 5249 4.088648 GCCGTGTTGTTTTCGATATGAAG 58.911 43.478 0.00 0.00 37.99 3.02
3044 5250 4.142988 GCCGTGTTGTTTTCGATATGAAGA 60.143 41.667 0.00 0.00 37.99 2.87
3045 5251 5.447279 GCCGTGTTGTTTTCGATATGAAGAT 60.447 40.000 0.00 0.00 37.99 2.40
3046 5252 6.237996 GCCGTGTTGTTTTCGATATGAAGATA 60.238 38.462 0.00 0.00 37.99 1.98
3047 5253 7.518370 GCCGTGTTGTTTTCGATATGAAGATAT 60.518 37.037 0.00 0.00 37.99 1.63
3048 5254 8.974408 CCGTGTTGTTTTCGATATGAAGATATA 58.026 33.333 0.00 0.00 37.99 0.86
3049 5255 9.779237 CGTGTTGTTTTCGATATGAAGATATAC 57.221 33.333 0.00 0.00 37.99 1.47
3074 5280 9.747898 ACTTGTTATGATTTGTTTAGGTATGGA 57.252 29.630 0.00 0.00 0.00 3.41
3077 5283 9.967451 TGTTATGATTTGTTTAGGTATGGAAGA 57.033 29.630 0.00 0.00 0.00 2.87
3092 5298 9.836179 AGGTATGGAAGATCTAGTTTATGAGAT 57.164 33.333 0.00 0.00 35.07 2.75
3107 5313 9.832445 AGTTTATGAGATATGTTTGGATACGTT 57.168 29.630 0.00 0.00 42.51 3.99
3111 5317 7.915293 TGAGATATGTTTGGATACGTTTTGT 57.085 32.000 0.00 0.00 42.51 2.83
3112 5318 9.607988 ATGAGATATGTTTGGATACGTTTTGTA 57.392 29.630 0.00 0.00 42.51 2.41
3113 5319 9.093970 TGAGATATGTTTGGATACGTTTTGTAG 57.906 33.333 0.00 0.00 36.25 2.74
3114 5320 9.309516 GAGATATGTTTGGATACGTTTTGTAGA 57.690 33.333 0.00 0.00 36.25 2.59
3115 5321 9.832445 AGATATGTTTGGATACGTTTTGTAGAT 57.168 29.630 0.00 0.00 36.25 1.98
3117 5323 7.915293 ATGTTTGGATACGTTTTGTAGATCA 57.085 32.000 0.00 0.00 36.25 2.92
3118 5324 7.731882 TGTTTGGATACGTTTTGTAGATCAA 57.268 32.000 0.00 0.00 36.25 2.57
3119 5325 8.155821 TGTTTGGATACGTTTTGTAGATCAAA 57.844 30.769 0.00 0.00 41.39 2.69
3120 5326 8.071368 TGTTTGGATACGTTTTGTAGATCAAAC 58.929 33.333 0.00 15.57 42.91 2.93
3121 5327 7.731882 TTGGATACGTTTTGTAGATCAAACA 57.268 32.000 0.00 0.00 42.27 2.83
3122 5328 7.124347 TGGATACGTTTTGTAGATCAAACAC 57.876 36.000 0.00 0.00 42.27 3.32
3123 5329 6.706716 TGGATACGTTTTGTAGATCAAACACA 59.293 34.615 0.00 0.00 42.27 3.72
3124 5330 7.013529 GGATACGTTTTGTAGATCAAACACAC 58.986 38.462 0.00 0.00 44.39 3.82
3125 5331 5.804692 ACGTTTTGTAGATCAAACACACA 57.195 34.783 0.00 0.00 44.39 3.72
3126 5332 5.565695 ACGTTTTGTAGATCAAACACACAC 58.434 37.500 0.00 0.00 44.39 3.82
3127 5333 4.967575 CGTTTTGTAGATCAAACACACACC 59.032 41.667 0.00 0.00 44.39 4.16
3128 5334 5.278604 GTTTTGTAGATCAAACACACACCC 58.721 41.667 0.00 0.00 44.39 4.61
3129 5335 3.134574 TGTAGATCAAACACACACCCC 57.865 47.619 0.00 0.00 0.00 4.95
3130 5336 2.708861 TGTAGATCAAACACACACCCCT 59.291 45.455 0.00 0.00 0.00 4.79
3131 5337 3.137544 TGTAGATCAAACACACACCCCTT 59.862 43.478 0.00 0.00 0.00 3.95
3132 5338 3.312736 AGATCAAACACACACCCCTTT 57.687 42.857 0.00 0.00 0.00 3.11
3133 5339 3.642141 AGATCAAACACACACCCCTTTT 58.358 40.909 0.00 0.00 0.00 2.27
3134 5340 4.798882 AGATCAAACACACACCCCTTTTA 58.201 39.130 0.00 0.00 0.00 1.52
3135 5341 5.393866 AGATCAAACACACACCCCTTTTAT 58.606 37.500 0.00 0.00 0.00 1.40
3136 5342 6.548321 AGATCAAACACACACCCCTTTTATA 58.452 36.000 0.00 0.00 0.00 0.98
3137 5343 7.182060 AGATCAAACACACACCCCTTTTATAT 58.818 34.615 0.00 0.00 0.00 0.86
3138 5344 8.333235 AGATCAAACACACACCCCTTTTATATA 58.667 33.333 0.00 0.00 0.00 0.86
3139 5345 9.131791 GATCAAACACACACCCCTTTTATATAT 57.868 33.333 0.00 0.00 0.00 0.86
3140 5346 8.887264 TCAAACACACACCCCTTTTATATATT 57.113 30.769 0.00 0.00 0.00 1.28
3141 5347 8.744652 TCAAACACACACCCCTTTTATATATTG 58.255 33.333 0.00 0.00 0.00 1.90
3142 5348 8.527810 CAAACACACACCCCTTTTATATATTGT 58.472 33.333 0.00 0.00 0.00 2.71
3143 5349 8.658840 AACACACACCCCTTTTATATATTGTT 57.341 30.769 0.00 0.00 0.00 2.83
3144 5350 9.756571 AACACACACCCCTTTTATATATTGTTA 57.243 29.630 0.00 0.00 0.00 2.41
3145 5351 9.181061 ACACACACCCCTTTTATATATTGTTAC 57.819 33.333 0.00 0.00 0.00 2.50
3146 5352 9.179909 CACACACCCCTTTTATATATTGTTACA 57.820 33.333 0.00 0.00 0.00 2.41
3147 5353 9.403583 ACACACCCCTTTTATATATTGTTACAG 57.596 33.333 0.00 0.00 0.00 2.74
3148 5354 9.621629 CACACCCCTTTTATATATTGTTACAGA 57.378 33.333 0.00 0.00 0.00 3.41
3149 5355 9.847224 ACACCCCTTTTATATATTGTTACAGAG 57.153 33.333 0.00 0.00 0.00 3.35
3169 5375 8.065473 ACAGAGATCTAACATATGCTATCTGG 57.935 38.462 14.50 9.56 35.81 3.86
3170 5376 7.673504 ACAGAGATCTAACATATGCTATCTGGT 59.326 37.037 14.50 9.96 35.81 4.00
3171 5377 8.530311 CAGAGATCTAACATATGCTATCTGGTT 58.470 37.037 1.58 0.00 0.00 3.67
3172 5378 9.760926 AGAGATCTAACATATGCTATCTGGTTA 57.239 33.333 1.58 0.00 0.00 2.85
3180 5386 9.494271 AACATATGCTATCTGGTTATTGTACAG 57.506 33.333 1.58 0.00 0.00 2.74
3181 5387 8.651389 ACATATGCTATCTGGTTATTGTACAGT 58.349 33.333 1.58 0.00 34.02 3.55
3182 5388 9.494271 CATATGCTATCTGGTTATTGTACAGTT 57.506 33.333 0.00 0.00 34.02 3.16
3185 5391 8.887036 TGCTATCTGGTTATTGTACAGTTATG 57.113 34.615 0.00 0.00 34.02 1.90
3186 5392 8.482943 TGCTATCTGGTTATTGTACAGTTATGT 58.517 33.333 0.00 0.00 43.76 2.29
3187 5393 9.976511 GCTATCTGGTTATTGTACAGTTATGTA 57.023 33.333 0.00 0.00 41.01 2.29
3203 5409 9.136323 ACAGTTATGTAGATCTCATATGACACA 57.864 33.333 0.00 0.00 38.09 3.72
3204 5410 9.971922 CAGTTATGTAGATCTCATATGACACAA 57.028 33.333 0.00 0.00 0.00 3.33
3207 5413 9.933723 TTATGTAGATCTCATATGACACAATGG 57.066 33.333 0.00 0.00 0.00 3.16
3208 5414 6.762333 TGTAGATCTCATATGACACAATGGG 58.238 40.000 0.00 0.00 0.00 4.00
3209 5415 4.649692 AGATCTCATATGACACAATGGGC 58.350 43.478 0.00 0.00 0.00 5.36
3210 5416 3.213206 TCTCATATGACACAATGGGCC 57.787 47.619 0.00 0.00 0.00 5.80
3211 5417 2.509131 TCTCATATGACACAATGGGCCA 59.491 45.455 9.61 9.61 0.00 5.36
3212 5418 2.620115 CTCATATGACACAATGGGCCAC 59.380 50.000 9.28 0.00 0.00 5.01
3213 5419 2.025510 TCATATGACACAATGGGCCACA 60.026 45.455 9.28 0.25 0.00 4.17
3214 5420 1.832883 TATGACACAATGGGCCACAC 58.167 50.000 9.28 0.00 0.00 3.82
3215 5421 0.178967 ATGACACAATGGGCCACACA 60.179 50.000 9.28 3.39 0.00 3.72
3216 5422 1.106351 TGACACAATGGGCCACACAC 61.106 55.000 9.28 0.00 0.00 3.82
3217 5423 1.076412 ACACAATGGGCCACACACA 60.076 52.632 9.28 0.00 0.00 3.72
3218 5424 0.469705 ACACAATGGGCCACACACAT 60.470 50.000 9.28 0.00 0.00 3.21
3219 5425 0.038067 CACAATGGGCCACACACATG 60.038 55.000 9.28 3.99 0.00 3.21
3220 5426 1.079681 CAATGGGCCACACACATGC 60.080 57.895 9.28 0.00 0.00 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
230 237 7.692460 TCTTCACAAATGCAATAGAACTCAT 57.308 32.000 0.00 0.00 0.00 2.90
521 1013 8.461249 AGCATCGTACTCTTACTTCCTATAAA 57.539 34.615 0.00 0.00 0.00 1.40
2022 3359 2.203640 TGGTCGGAGTGCAGGAGT 60.204 61.111 0.00 0.00 0.00 3.85
2130 3470 0.179009 CCATCTTCACCATGGCCGAT 60.179 55.000 13.04 5.76 34.59 4.18
2489 4695 6.763135 ACTACATGCCTGACTATGTAAACATG 59.237 38.462 5.85 0.00 38.78 3.21
2546 4752 5.349817 AGAGCATACAACAACTGATCTTTCG 59.650 40.000 0.00 0.00 32.04 3.46
2762 4968 6.400568 AGCATTGATTACTCAAACCAAATGG 58.599 36.000 0.00 0.00 44.29 3.16
2763 4969 7.092079 TGAGCATTGATTACTCAAACCAAATG 58.908 34.615 0.00 0.00 44.29 2.32
2764 4970 7.230849 TGAGCATTGATTACTCAAACCAAAT 57.769 32.000 0.00 0.00 44.29 2.32
2765 4971 6.647334 TGAGCATTGATTACTCAAACCAAA 57.353 33.333 0.00 0.00 44.29 3.28
2766 4972 6.660521 AGATGAGCATTGATTACTCAAACCAA 59.339 34.615 0.00 0.00 44.29 3.67
2767 4973 6.182627 AGATGAGCATTGATTACTCAAACCA 58.817 36.000 0.00 0.00 44.29 3.67
2768 4974 6.690194 AGATGAGCATTGATTACTCAAACC 57.310 37.500 0.00 0.00 44.29 3.27
2769 4975 8.119226 GTGTAGATGAGCATTGATTACTCAAAC 58.881 37.037 0.00 0.00 44.29 2.93
2770 4976 7.823799 TGTGTAGATGAGCATTGATTACTCAAA 59.176 33.333 0.00 0.00 44.29 2.69
2771 4977 7.278646 GTGTGTAGATGAGCATTGATTACTCAA 59.721 37.037 0.00 0.00 43.23 3.02
2772 4978 6.758416 GTGTGTAGATGAGCATTGATTACTCA 59.242 38.462 0.00 0.00 44.06 3.41
2773 4979 6.983307 AGTGTGTAGATGAGCATTGATTACTC 59.017 38.462 0.00 0.00 0.00 2.59
2774 4980 6.882656 AGTGTGTAGATGAGCATTGATTACT 58.117 36.000 0.00 0.00 0.00 2.24
2775 4981 7.493971 AGAAGTGTGTAGATGAGCATTGATTAC 59.506 37.037 0.00 0.00 0.00 1.89
2776 4982 7.559486 AGAAGTGTGTAGATGAGCATTGATTA 58.441 34.615 0.00 0.00 0.00 1.75
2777 4983 6.413052 AGAAGTGTGTAGATGAGCATTGATT 58.587 36.000 0.00 0.00 0.00 2.57
2778 4984 5.987098 AGAAGTGTGTAGATGAGCATTGAT 58.013 37.500 0.00 0.00 0.00 2.57
2779 4985 5.411831 AGAAGTGTGTAGATGAGCATTGA 57.588 39.130 0.00 0.00 0.00 2.57
2780 4986 6.072838 ACAAAGAAGTGTGTAGATGAGCATTG 60.073 38.462 0.00 0.00 0.00 2.82
2781 4987 6.000219 ACAAAGAAGTGTGTAGATGAGCATT 59.000 36.000 0.00 0.00 0.00 3.56
2782 4988 5.555017 ACAAAGAAGTGTGTAGATGAGCAT 58.445 37.500 0.00 0.00 0.00 3.79
2783 4989 4.960938 ACAAAGAAGTGTGTAGATGAGCA 58.039 39.130 0.00 0.00 0.00 4.26
2784 4990 4.090642 CGACAAAGAAGTGTGTAGATGAGC 59.909 45.833 0.00 0.00 0.00 4.26
2785 4991 4.623167 CCGACAAAGAAGTGTGTAGATGAG 59.377 45.833 0.00 0.00 0.00 2.90
2786 4992 4.038763 ACCGACAAAGAAGTGTGTAGATGA 59.961 41.667 0.00 0.00 0.00 2.92
2787 4993 4.150627 CACCGACAAAGAAGTGTGTAGATG 59.849 45.833 0.00 0.00 0.00 2.90
2788 4994 4.307432 CACCGACAAAGAAGTGTGTAGAT 58.693 43.478 0.00 0.00 0.00 1.98
2789 4995 3.713288 CACCGACAAAGAAGTGTGTAGA 58.287 45.455 0.00 0.00 0.00 2.59
2790 4996 2.221055 GCACCGACAAAGAAGTGTGTAG 59.779 50.000 0.00 0.00 32.75 2.74
2791 4997 2.206750 GCACCGACAAAGAAGTGTGTA 58.793 47.619 0.00 0.00 32.75 2.90
2792 4998 1.014352 GCACCGACAAAGAAGTGTGT 58.986 50.000 0.00 0.00 32.75 3.72
2793 4999 1.013596 TGCACCGACAAAGAAGTGTG 58.986 50.000 0.00 0.00 32.75 3.82
2794 5000 1.603802 CATGCACCGACAAAGAAGTGT 59.396 47.619 0.00 0.00 32.75 3.55
2795 5001 1.664016 GCATGCACCGACAAAGAAGTG 60.664 52.381 14.21 0.00 0.00 3.16
2796 5002 0.593128 GCATGCACCGACAAAGAAGT 59.407 50.000 14.21 0.00 0.00 3.01
2797 5003 0.877071 AGCATGCACCGACAAAGAAG 59.123 50.000 21.98 0.00 0.00 2.85
2798 5004 0.592637 CAGCATGCACCGACAAAGAA 59.407 50.000 21.98 0.00 0.00 2.52
2799 5005 1.236616 CCAGCATGCACCGACAAAGA 61.237 55.000 21.98 0.00 31.97 2.52
2800 5006 1.210931 CCAGCATGCACCGACAAAG 59.789 57.895 21.98 0.00 31.97 2.77
2801 5007 1.528076 ACCAGCATGCACCGACAAA 60.528 52.632 21.98 0.00 31.97 2.83
2802 5008 2.112928 ACCAGCATGCACCGACAA 59.887 55.556 21.98 0.00 31.97 3.18
2803 5009 2.669229 CACCAGCATGCACCGACA 60.669 61.111 21.98 0.00 31.97 4.35
2804 5010 2.669569 ACACCAGCATGCACCGAC 60.670 61.111 21.98 0.00 31.97 4.79
2805 5011 1.540435 TAGACACCAGCATGCACCGA 61.540 55.000 21.98 0.00 31.97 4.69
2806 5012 0.673333 TTAGACACCAGCATGCACCG 60.673 55.000 21.98 8.82 31.97 4.94
2807 5013 1.672881 GATTAGACACCAGCATGCACC 59.327 52.381 21.98 1.77 31.97 5.01
2808 5014 2.096496 GTGATTAGACACCAGCATGCAC 59.904 50.000 21.98 0.00 35.07 4.57
2809 5015 2.026915 AGTGATTAGACACCAGCATGCA 60.027 45.455 21.98 0.00 41.12 3.96
2810 5016 2.611292 GAGTGATTAGACACCAGCATGC 59.389 50.000 10.51 10.51 41.12 4.06
2811 5017 3.865446 TGAGTGATTAGACACCAGCATG 58.135 45.455 0.00 0.00 41.12 4.06
2812 5018 4.558226 TTGAGTGATTAGACACCAGCAT 57.442 40.909 0.00 0.00 41.12 3.79
2813 5019 4.065088 GTTTGAGTGATTAGACACCAGCA 58.935 43.478 0.00 0.00 41.12 4.41
2814 5020 3.437049 GGTTTGAGTGATTAGACACCAGC 59.563 47.826 0.00 0.00 41.12 4.85
2815 5021 4.641396 TGGTTTGAGTGATTAGACACCAG 58.359 43.478 0.00 0.00 41.12 4.00
2816 5022 4.698201 TGGTTTGAGTGATTAGACACCA 57.302 40.909 0.00 0.00 41.12 4.17
2817 5023 6.575162 AAATGGTTTGAGTGATTAGACACC 57.425 37.500 0.00 0.00 41.12 4.16
2824 5030 9.612066 ACACAAAATAAAATGGTTTGAGTGATT 57.388 25.926 0.00 0.00 35.60 2.57
2829 5035 9.810231 GCAATACACAAAATAAAATGGTTTGAG 57.190 29.630 2.61 0.00 36.09 3.02
2830 5036 8.778358 GGCAATACACAAAATAAAATGGTTTGA 58.222 29.630 2.61 0.00 36.09 2.69
2831 5037 8.562892 TGGCAATACACAAAATAAAATGGTTTG 58.437 29.630 0.00 0.00 38.06 2.93
2832 5038 8.563732 GTGGCAATACACAAAATAAAATGGTTT 58.436 29.630 0.00 0.00 40.99 3.27
2833 5039 7.936301 AGTGGCAATACACAAAATAAAATGGTT 59.064 29.630 0.00 0.00 43.72 3.67
2834 5040 7.449247 AGTGGCAATACACAAAATAAAATGGT 58.551 30.769 0.00 0.00 43.72 3.55
2835 5041 7.903995 AGTGGCAATACACAAAATAAAATGG 57.096 32.000 0.00 0.00 43.72 3.16
2842 5048 9.777297 AAATTTCTTAGTGGCAATACACAAAAT 57.223 25.926 0.00 0.00 43.72 1.82
2843 5049 9.606631 AAAATTTCTTAGTGGCAATACACAAAA 57.393 25.926 0.00 0.00 43.72 2.44
2844 5050 9.039870 CAAAATTTCTTAGTGGCAATACACAAA 57.960 29.630 0.00 0.00 43.72 2.83
2845 5051 8.200792 ACAAAATTTCTTAGTGGCAATACACAA 58.799 29.630 0.00 0.00 43.72 3.33
2846 5052 7.721402 ACAAAATTTCTTAGTGGCAATACACA 58.279 30.769 0.00 0.00 43.72 3.72
2847 5053 9.855021 ATACAAAATTTCTTAGTGGCAATACAC 57.145 29.630 0.00 0.00 41.63 2.90
2851 5057 9.533253 GCATATACAAAATTTCTTAGTGGCAAT 57.467 29.630 0.00 0.00 0.00 3.56
2852 5058 8.748412 AGCATATACAAAATTTCTTAGTGGCAA 58.252 29.630 0.00 0.00 0.00 4.52
2853 5059 8.190122 CAGCATATACAAAATTTCTTAGTGGCA 58.810 33.333 0.00 0.00 0.00 4.92
2854 5060 8.405531 TCAGCATATACAAAATTTCTTAGTGGC 58.594 33.333 0.00 0.00 0.00 5.01
2855 5061 9.722056 GTCAGCATATACAAAATTTCTTAGTGG 57.278 33.333 0.00 0.00 0.00 4.00
2861 5067 9.672673 AGTACTGTCAGCATATACAAAATTTCT 57.327 29.630 0.00 0.00 0.00 2.52
2867 5073 9.884636 ACAATTAGTACTGTCAGCATATACAAA 57.115 29.630 5.39 0.00 0.00 2.83
2868 5074 9.529325 GACAATTAGTACTGTCAGCATATACAA 57.471 33.333 5.39 0.00 41.35 2.41
2869 5075 8.914011 AGACAATTAGTACTGTCAGCATATACA 58.086 33.333 5.39 0.00 43.64 2.29
2872 5078 8.914011 TGTAGACAATTAGTACTGTCAGCATAT 58.086 33.333 5.39 0.00 43.64 1.78
2873 5079 8.188799 GTGTAGACAATTAGTACTGTCAGCATA 58.811 37.037 5.39 0.00 43.64 3.14
2874 5080 7.036220 GTGTAGACAATTAGTACTGTCAGCAT 58.964 38.462 5.39 0.00 43.64 3.79
2875 5081 6.015772 TGTGTAGACAATTAGTACTGTCAGCA 60.016 38.462 5.39 5.68 43.64 4.41
2876 5082 6.387465 TGTGTAGACAATTAGTACTGTCAGC 58.613 40.000 5.39 3.29 43.64 4.26
2877 5083 7.865889 TGTTGTGTAGACAATTAGTACTGTCAG 59.134 37.037 8.87 0.00 43.95 3.51
2878 5084 7.718525 TGTTGTGTAGACAATTAGTACTGTCA 58.281 34.615 8.87 0.00 43.95 3.58
2879 5085 8.758633 ATGTTGTGTAGACAATTAGTACTGTC 57.241 34.615 8.87 5.23 43.95 3.51
2885 5091 9.383519 CCATCTTATGTTGTGTAGACAATTAGT 57.616 33.333 8.87 0.00 43.95 2.24
2886 5092 9.383519 ACCATCTTATGTTGTGTAGACAATTAG 57.616 33.333 8.87 4.76 43.95 1.73
2888 5094 9.733556 TTACCATCTTATGTTGTGTAGACAATT 57.266 29.630 8.87 2.92 43.95 2.32
2889 5095 9.162764 GTTACCATCTTATGTTGTGTAGACAAT 57.837 33.333 8.87 0.00 43.95 2.71
2890 5096 8.151596 TGTTACCATCTTATGTTGTGTAGACAA 58.848 33.333 0.45 0.45 39.88 3.18
2891 5097 7.672240 TGTTACCATCTTATGTTGTGTAGACA 58.328 34.615 0.00 0.00 0.00 3.41
2892 5098 8.542497 TTGTTACCATCTTATGTTGTGTAGAC 57.458 34.615 0.00 0.00 0.00 2.59
2916 5122 9.429359 CGAATGGAGCACTATAGAAGAATTATT 57.571 33.333 6.78 0.00 0.00 1.40
2917 5123 8.589338 ACGAATGGAGCACTATAGAAGAATTAT 58.411 33.333 6.78 0.00 0.00 1.28
2918 5124 7.867909 CACGAATGGAGCACTATAGAAGAATTA 59.132 37.037 6.78 0.00 0.00 1.40
2919 5125 6.703607 CACGAATGGAGCACTATAGAAGAATT 59.296 38.462 6.78 0.00 0.00 2.17
2920 5126 6.183360 ACACGAATGGAGCACTATAGAAGAAT 60.183 38.462 6.78 0.00 0.00 2.40
2921 5127 5.127194 ACACGAATGGAGCACTATAGAAGAA 59.873 40.000 6.78 0.00 0.00 2.52
2922 5128 4.645136 ACACGAATGGAGCACTATAGAAGA 59.355 41.667 6.78 0.00 0.00 2.87
2923 5129 4.938080 ACACGAATGGAGCACTATAGAAG 58.062 43.478 6.78 0.00 0.00 2.85
2924 5130 6.490381 AGATACACGAATGGAGCACTATAGAA 59.510 38.462 6.78 0.00 0.00 2.10
2925 5131 6.004574 AGATACACGAATGGAGCACTATAGA 58.995 40.000 6.78 0.00 0.00 1.98
2926 5132 6.260870 AGATACACGAATGGAGCACTATAG 57.739 41.667 0.00 0.00 0.00 1.31
2927 5133 7.067129 GGATAGATACACGAATGGAGCACTATA 59.933 40.741 0.00 0.00 0.00 1.31
2928 5134 6.127591 GGATAGATACACGAATGGAGCACTAT 60.128 42.308 0.00 0.00 0.00 2.12
2929 5135 5.183331 GGATAGATACACGAATGGAGCACTA 59.817 44.000 0.00 0.00 0.00 2.74
2930 5136 4.021894 GGATAGATACACGAATGGAGCACT 60.022 45.833 0.00 0.00 0.00 4.40
2931 5137 4.238514 GGATAGATACACGAATGGAGCAC 58.761 47.826 0.00 0.00 0.00 4.40
2932 5138 3.895041 TGGATAGATACACGAATGGAGCA 59.105 43.478 0.00 0.00 0.00 4.26
2933 5139 4.521130 TGGATAGATACACGAATGGAGC 57.479 45.455 0.00 0.00 0.00 4.70
2934 5140 7.154656 TGAAATGGATAGATACACGAATGGAG 58.845 38.462 0.00 0.00 0.00 3.86
2935 5141 7.061566 TGAAATGGATAGATACACGAATGGA 57.938 36.000 0.00 0.00 0.00 3.41
2936 5142 7.912056 ATGAAATGGATAGATACACGAATGG 57.088 36.000 0.00 0.00 0.00 3.16
2963 5169 9.866655 ATTCCATCACATACACCAATACTAAAT 57.133 29.630 0.00 0.00 0.00 1.40
2964 5170 9.119418 CATTCCATCACATACACCAATACTAAA 57.881 33.333 0.00 0.00 0.00 1.85
2965 5171 8.271458 ACATTCCATCACATACACCAATACTAA 58.729 33.333 0.00 0.00 0.00 2.24
2966 5172 7.801104 ACATTCCATCACATACACCAATACTA 58.199 34.615 0.00 0.00 0.00 1.82
2967 5173 6.662755 ACATTCCATCACATACACCAATACT 58.337 36.000 0.00 0.00 0.00 2.12
2968 5174 6.942532 ACATTCCATCACATACACCAATAC 57.057 37.500 0.00 0.00 0.00 1.89
2969 5175 7.345691 AGAACATTCCATCACATACACCAATA 58.654 34.615 0.00 0.00 0.00 1.90
2970 5176 6.189859 AGAACATTCCATCACATACACCAAT 58.810 36.000 0.00 0.00 0.00 3.16
2971 5177 5.569355 AGAACATTCCATCACATACACCAA 58.431 37.500 0.00 0.00 0.00 3.67
2972 5178 5.178096 AGAACATTCCATCACATACACCA 57.822 39.130 0.00 0.00 0.00 4.17
2973 5179 6.515272 AAAGAACATTCCATCACATACACC 57.485 37.500 0.00 0.00 0.00 4.16
2974 5180 7.326789 CACAAAAGAACATTCCATCACATACAC 59.673 37.037 0.00 0.00 0.00 2.90
2975 5181 7.014134 ACACAAAAGAACATTCCATCACATACA 59.986 33.333 0.00 0.00 0.00 2.29
2976 5182 7.326789 CACACAAAAGAACATTCCATCACATAC 59.673 37.037 0.00 0.00 0.00 2.39
2977 5183 7.369607 CACACAAAAGAACATTCCATCACATA 58.630 34.615 0.00 0.00 0.00 2.29
2978 5184 6.218019 CACACAAAAGAACATTCCATCACAT 58.782 36.000 0.00 0.00 0.00 3.21
2979 5185 5.590145 CACACAAAAGAACATTCCATCACA 58.410 37.500 0.00 0.00 0.00 3.58
2980 5186 4.445385 GCACACAAAAGAACATTCCATCAC 59.555 41.667 0.00 0.00 0.00 3.06
2981 5187 4.099113 TGCACACAAAAGAACATTCCATCA 59.901 37.500 0.00 0.00 0.00 3.07
2982 5188 4.619973 TGCACACAAAAGAACATTCCATC 58.380 39.130 0.00 0.00 0.00 3.51
2983 5189 4.669206 TGCACACAAAAGAACATTCCAT 57.331 36.364 0.00 0.00 0.00 3.41
2984 5190 4.462508 TTGCACACAAAAGAACATTCCA 57.537 36.364 0.00 0.00 31.21 3.53
2985 5191 5.989551 AATTGCACACAAAAGAACATTCC 57.010 34.783 0.00 0.00 39.77 3.01
2986 5192 8.216453 GTCATAATTGCACACAAAAGAACATTC 58.784 33.333 0.00 0.00 39.77 2.67
2987 5193 7.096106 CGTCATAATTGCACACAAAAGAACATT 60.096 33.333 0.00 0.00 39.77 2.71
2988 5194 6.363088 CGTCATAATTGCACACAAAAGAACAT 59.637 34.615 0.00 0.00 39.77 2.71
2989 5195 5.685068 CGTCATAATTGCACACAAAAGAACA 59.315 36.000 0.00 0.00 39.77 3.18
2990 5196 5.912396 TCGTCATAATTGCACACAAAAGAAC 59.088 36.000 0.00 0.00 39.77 3.01
2991 5197 5.912396 GTCGTCATAATTGCACACAAAAGAA 59.088 36.000 0.00 0.00 39.77 2.52
2992 5198 5.238432 AGTCGTCATAATTGCACACAAAAGA 59.762 36.000 0.00 0.00 39.77 2.52
2993 5199 5.451908 AGTCGTCATAATTGCACACAAAAG 58.548 37.500 0.00 0.00 39.77 2.27
2994 5200 5.238432 AGAGTCGTCATAATTGCACACAAAA 59.762 36.000 0.00 0.00 39.77 2.44
2995 5201 4.754618 AGAGTCGTCATAATTGCACACAAA 59.245 37.500 0.00 0.00 39.77 2.83
2996 5202 4.314961 AGAGTCGTCATAATTGCACACAA 58.685 39.130 0.00 0.00 40.87 3.33
2997 5203 3.925379 AGAGTCGTCATAATTGCACACA 58.075 40.909 0.00 0.00 0.00 3.72
2998 5204 4.504461 CCTAGAGTCGTCATAATTGCACAC 59.496 45.833 0.00 0.00 0.00 3.82
2999 5205 4.682787 CCTAGAGTCGTCATAATTGCACA 58.317 43.478 0.00 0.00 0.00 4.57
3000 5206 3.491267 GCCTAGAGTCGTCATAATTGCAC 59.509 47.826 0.00 0.00 0.00 4.57
3001 5207 3.492656 GGCCTAGAGTCGTCATAATTGCA 60.493 47.826 0.00 0.00 0.00 4.08
3002 5208 3.060602 GGCCTAGAGTCGTCATAATTGC 58.939 50.000 0.00 0.00 0.00 3.56
3003 5209 3.243434 ACGGCCTAGAGTCGTCATAATTG 60.243 47.826 0.00 0.00 30.89 2.32
3004 5210 2.957006 ACGGCCTAGAGTCGTCATAATT 59.043 45.455 0.00 0.00 30.89 1.40
3005 5211 2.293677 CACGGCCTAGAGTCGTCATAAT 59.706 50.000 0.00 0.00 34.73 1.28
3006 5212 1.674441 CACGGCCTAGAGTCGTCATAA 59.326 52.381 0.00 0.00 34.73 1.90
3007 5213 1.306148 CACGGCCTAGAGTCGTCATA 58.694 55.000 0.00 0.00 34.73 2.15
3008 5214 0.680280 ACACGGCCTAGAGTCGTCAT 60.680 55.000 0.00 0.00 34.73 3.06
3009 5215 0.892358 AACACGGCCTAGAGTCGTCA 60.892 55.000 0.00 0.00 34.73 4.35
3010 5216 0.456312 CAACACGGCCTAGAGTCGTC 60.456 60.000 0.00 0.00 34.73 4.20
3011 5217 1.177256 ACAACACGGCCTAGAGTCGT 61.177 55.000 0.00 5.23 37.64 4.34
3012 5218 0.038526 AACAACACGGCCTAGAGTCG 60.039 55.000 0.00 4.04 0.00 4.18
3013 5219 2.165319 AAACAACACGGCCTAGAGTC 57.835 50.000 0.00 0.00 0.00 3.36
3014 5220 2.490991 GAAAACAACACGGCCTAGAGT 58.509 47.619 0.00 0.00 0.00 3.24
3015 5221 1.459592 CGAAAACAACACGGCCTAGAG 59.540 52.381 0.00 0.00 0.00 2.43
3016 5222 1.068895 TCGAAAACAACACGGCCTAGA 59.931 47.619 0.00 0.00 0.00 2.43
3017 5223 1.504359 TCGAAAACAACACGGCCTAG 58.496 50.000 0.00 0.00 0.00 3.02
3018 5224 2.172851 ATCGAAAACAACACGGCCTA 57.827 45.000 0.00 0.00 0.00 3.93
3019 5225 2.172851 TATCGAAAACAACACGGCCT 57.827 45.000 0.00 0.00 0.00 5.19
3020 5226 2.417239 TCATATCGAAAACAACACGGCC 59.583 45.455 0.00 0.00 0.00 6.13
3021 5227 3.733024 TCATATCGAAAACAACACGGC 57.267 42.857 0.00 0.00 0.00 5.68
3022 5228 5.524511 TCTTCATATCGAAAACAACACGG 57.475 39.130 0.00 0.00 31.71 4.94
3023 5229 9.779237 GTATATCTTCATATCGAAAACAACACG 57.221 33.333 0.00 0.00 31.71 4.49
3048 5254 9.747898 TCCATACCTAAACAAATCATAACAAGT 57.252 29.630 0.00 0.00 0.00 3.16
3051 5257 9.967451 TCTTCCATACCTAAACAAATCATAACA 57.033 29.630 0.00 0.00 0.00 2.41
3066 5272 9.836179 ATCTCATAAACTAGATCTTCCATACCT 57.164 33.333 0.00 0.00 0.00 3.08
3081 5287 9.832445 AACGTATCCAAACATATCTCATAAACT 57.168 29.630 0.00 0.00 0.00 2.66
3085 5291 9.607988 ACAAAACGTATCCAAACATATCTCATA 57.392 29.630 0.00 0.00 0.00 2.15
3086 5292 8.506168 ACAAAACGTATCCAAACATATCTCAT 57.494 30.769 0.00 0.00 0.00 2.90
3087 5293 7.915293 ACAAAACGTATCCAAACATATCTCA 57.085 32.000 0.00 0.00 0.00 3.27
3088 5294 9.309516 TCTACAAAACGTATCCAAACATATCTC 57.690 33.333 0.00 0.00 0.00 2.75
3089 5295 9.832445 ATCTACAAAACGTATCCAAACATATCT 57.168 29.630 0.00 0.00 0.00 1.98
3091 5297 9.607988 TGATCTACAAAACGTATCCAAACATAT 57.392 29.630 0.00 0.00 0.00 1.78
3092 5298 9.438228 TTGATCTACAAAACGTATCCAAACATA 57.562 29.630 0.00 0.00 35.39 2.29
3093 5299 7.915293 TGATCTACAAAACGTATCCAAACAT 57.085 32.000 0.00 0.00 0.00 2.71
3094 5300 7.731882 TTGATCTACAAAACGTATCCAAACA 57.268 32.000 0.00 0.00 35.39 2.83
3107 5313 3.886505 GGGGTGTGTGTTTGATCTACAAA 59.113 43.478 3.31 0.00 44.79 2.83
3108 5314 3.137544 AGGGGTGTGTGTTTGATCTACAA 59.862 43.478 3.31 0.00 36.65 2.41
3109 5315 2.708861 AGGGGTGTGTGTTTGATCTACA 59.291 45.455 0.00 0.00 0.00 2.74
3110 5316 3.418684 AGGGGTGTGTGTTTGATCTAC 57.581 47.619 0.00 0.00 0.00 2.59
3111 5317 4.447138 AAAGGGGTGTGTGTTTGATCTA 57.553 40.909 0.00 0.00 0.00 1.98
3112 5318 3.312736 AAAGGGGTGTGTGTTTGATCT 57.687 42.857 0.00 0.00 0.00 2.75
3113 5319 5.722021 ATAAAAGGGGTGTGTGTTTGATC 57.278 39.130 0.00 0.00 0.00 2.92
3114 5320 9.487442 AATATATAAAAGGGGTGTGTGTTTGAT 57.513 29.630 0.00 0.00 0.00 2.57
3115 5321 8.744652 CAATATATAAAAGGGGTGTGTGTTTGA 58.255 33.333 0.00 0.00 0.00 2.69
3116 5322 8.527810 ACAATATATAAAAGGGGTGTGTGTTTG 58.472 33.333 0.00 0.00 0.00 2.93
3117 5323 8.658840 ACAATATATAAAAGGGGTGTGTGTTT 57.341 30.769 0.00 0.00 0.00 2.83
3118 5324 8.658840 AACAATATATAAAAGGGGTGTGTGTT 57.341 30.769 0.00 0.00 0.00 3.32
3119 5325 9.181061 GTAACAATATATAAAAGGGGTGTGTGT 57.819 33.333 0.00 0.00 0.00 3.72
3120 5326 9.179909 TGTAACAATATATAAAAGGGGTGTGTG 57.820 33.333 0.00 0.00 0.00 3.82
3121 5327 9.403583 CTGTAACAATATATAAAAGGGGTGTGT 57.596 33.333 0.00 0.00 0.00 3.72
3122 5328 9.621629 TCTGTAACAATATATAAAAGGGGTGTG 57.378 33.333 0.00 0.00 0.00 3.82
3123 5329 9.847224 CTCTGTAACAATATATAAAAGGGGTGT 57.153 33.333 0.00 0.00 0.00 4.16
3143 5349 9.183368 CCAGATAGCATATGTTAGATCTCTGTA 57.817 37.037 18.67 0.00 0.00 2.74
3144 5350 7.673504 ACCAGATAGCATATGTTAGATCTCTGT 59.326 37.037 18.67 10.30 0.00 3.41
3145 5351 8.065473 ACCAGATAGCATATGTTAGATCTCTG 57.935 38.462 15.60 15.60 0.00 3.35
3146 5352 8.663209 AACCAGATAGCATATGTTAGATCTCT 57.337 34.615 0.00 0.00 0.00 3.10
3154 5360 9.494271 CTGTACAATAACCAGATAGCATATGTT 57.506 33.333 4.29 0.08 0.00 2.71
3155 5361 8.651389 ACTGTACAATAACCAGATAGCATATGT 58.349 33.333 4.29 0.00 0.00 2.29
3156 5362 9.494271 AACTGTACAATAACCAGATAGCATATG 57.506 33.333 0.00 0.00 0.00 1.78
3159 5365 9.494271 CATAACTGTACAATAACCAGATAGCAT 57.506 33.333 0.00 0.00 0.00 3.79
3160 5366 8.482943 ACATAACTGTACAATAACCAGATAGCA 58.517 33.333 0.00 0.00 32.49 3.49
3161 5367 8.888579 ACATAACTGTACAATAACCAGATAGC 57.111 34.615 0.00 0.00 32.49 2.97
3177 5383 9.136323 TGTGTCATATGAGATCTACATAACTGT 57.864 33.333 5.42 0.00 39.49 3.55
3178 5384 9.971922 TTGTGTCATATGAGATCTACATAACTG 57.028 33.333 5.42 11.22 34.58 3.16
3181 5387 9.933723 CCATTGTGTCATATGAGATCTACATAA 57.066 33.333 5.42 5.25 34.58 1.90
3182 5388 8.534496 CCCATTGTGTCATATGAGATCTACATA 58.466 37.037 5.42 13.69 35.23 2.29
3183 5389 7.392418 CCCATTGTGTCATATGAGATCTACAT 58.608 38.462 5.42 4.13 0.00 2.29
3184 5390 6.742363 GCCCATTGTGTCATATGAGATCTACA 60.742 42.308 5.42 4.39 0.00 2.74
3185 5391 5.641209 GCCCATTGTGTCATATGAGATCTAC 59.359 44.000 5.42 1.87 0.00 2.59
3186 5392 5.280164 GGCCCATTGTGTCATATGAGATCTA 60.280 44.000 5.42 0.00 0.00 1.98
3187 5393 4.506271 GGCCCATTGTGTCATATGAGATCT 60.506 45.833 5.42 0.00 0.00 2.75
3188 5394 3.755378 GGCCCATTGTGTCATATGAGATC 59.245 47.826 5.42 0.91 0.00 2.75
3189 5395 3.138839 TGGCCCATTGTGTCATATGAGAT 59.861 43.478 5.42 0.00 0.00 2.75
3190 5396 2.509131 TGGCCCATTGTGTCATATGAGA 59.491 45.455 5.42 1.05 0.00 3.27
3191 5397 2.620115 GTGGCCCATTGTGTCATATGAG 59.380 50.000 5.42 0.00 0.00 2.90
3192 5398 2.025510 TGTGGCCCATTGTGTCATATGA 60.026 45.455 0.00 0.00 0.00 2.15
3193 5399 2.099592 GTGTGGCCCATTGTGTCATATG 59.900 50.000 0.00 0.00 0.00 1.78
3194 5400 2.291475 TGTGTGGCCCATTGTGTCATAT 60.291 45.455 0.00 0.00 0.00 1.78
3195 5401 1.074566 TGTGTGGCCCATTGTGTCATA 59.925 47.619 0.00 0.00 0.00 2.15
3196 5402 0.178967 TGTGTGGCCCATTGTGTCAT 60.179 50.000 0.00 0.00 0.00 3.06
3197 5403 1.106351 GTGTGTGGCCCATTGTGTCA 61.106 55.000 0.00 0.00 0.00 3.58
3198 5404 1.106351 TGTGTGTGGCCCATTGTGTC 61.106 55.000 0.00 0.00 0.00 3.67
3199 5405 0.469705 ATGTGTGTGGCCCATTGTGT 60.470 50.000 0.00 0.00 0.00 3.72
3200 5406 0.038067 CATGTGTGTGGCCCATTGTG 60.038 55.000 0.00 0.00 0.00 3.33
3201 5407 1.818959 GCATGTGTGTGGCCCATTGT 61.819 55.000 0.00 0.00 0.00 2.71
3202 5408 1.079681 GCATGTGTGTGGCCCATTG 60.080 57.895 0.00 0.00 0.00 2.82
3203 5409 3.379880 GCATGTGTGTGGCCCATT 58.620 55.556 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.