Multiple sequence alignment - TraesCS2A01G105200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G105200 chr2A 100.000 3198 0 0 1 3198 57974277 57977474 0.000000e+00 5906.0
1 TraesCS2A01G105200 chr2A 83.590 780 92 18 1312 2086 36719041 36718293 0.000000e+00 699.0
2 TraesCS2A01G105200 chr2A 83.079 786 107 16 1309 2086 36657688 36658455 0.000000e+00 691.0
3 TraesCS2A01G105200 chr2A 91.016 256 20 3 2727 2980 189173699 189173953 3.050000e-90 342.0
4 TraesCS2A01G105200 chr2A 100.000 28 0 0 1412 1439 706207888 706207915 6.000000e-03 52.8
5 TraesCS2A01G105200 chr2D 88.244 1378 92 25 885 2237 56530366 56531698 0.000000e+00 1583.0
6 TraesCS2A01G105200 chr2D 83.055 779 99 20 1312 2086 33875103 33874354 0.000000e+00 676.0
7 TraesCS2A01G105200 chr2D 92.781 471 21 6 2237 2706 56532036 56532494 0.000000e+00 669.0
8 TraesCS2A01G105200 chr2D 84.615 364 50 4 1753 2112 33849691 33849330 1.090000e-94 357.0
9 TraesCS2A01G105200 chr2D 82.683 410 63 5 1730 2133 33855527 33855120 1.090000e-94 357.0
10 TraesCS2A01G105200 chr4A 96.084 766 28 2 1 764 590251406 590250641 0.000000e+00 1247.0
11 TraesCS2A01G105200 chr1A 91.921 755 61 0 1 755 560411300 560412054 0.000000e+00 1057.0
12 TraesCS2A01G105200 chr1B 90.728 755 69 1 1 754 642436619 642435865 0.000000e+00 1005.0
13 TraesCS2A01G105200 chr1B 93.631 157 10 0 3020 3176 73264259 73264415 5.330000e-58 235.0
14 TraesCS2A01G105200 chr7A 95.966 471 18 1 2728 3198 353215258 353214789 0.000000e+00 763.0
15 TraesCS2A01G105200 chr5A 94.715 473 24 1 2727 3198 468862894 468863366 0.000000e+00 734.0
16 TraesCS2A01G105200 chr5A 94.456 469 25 1 2730 3198 546166237 546165770 0.000000e+00 721.0
17 TraesCS2A01G105200 chr1D 84.106 755 117 3 1 754 65586393 65585641 0.000000e+00 726.0
18 TraesCS2A01G105200 chr1D 90.945 254 22 1 2728 2981 294226844 294227096 1.100000e-89 340.0
19 TraesCS2A01G105200 chr2B 94.243 469 26 1 2730 3198 668168200 668167733 0.000000e+00 715.0
20 TraesCS2A01G105200 chr2B 83.632 782 94 20 1309 2086 55887886 55888637 0.000000e+00 704.0
21 TraesCS2A01G105200 chr2B 85.127 511 58 7 2208 2706 89541405 89541909 1.020000e-139 507.0
22 TraesCS2A01G105200 chr2B 91.643 347 21 6 1288 1626 89540271 89540617 1.040000e-129 473.0
23 TraesCS2A01G105200 chr2B 88.630 387 35 3 1746 2123 89541014 89541400 2.250000e-126 462.0
24 TraesCS2A01G105200 chr2B 84.211 228 22 9 888 1112 89447166 89447382 3.230000e-50 209.0
25 TraesCS2A01G105200 chr2B 88.535 157 18 0 3020 3176 300063423 300063579 1.170000e-44 191.0
26 TraesCS2A01G105200 chr2B 91.111 135 12 0 1130 1264 89519823 89519957 1.960000e-42 183.0
27 TraesCS2A01G105200 chr2B 100.000 28 0 0 3147 3174 489159334 489159361 6.000000e-03 52.8
28 TraesCS2A01G105200 chr6B 82.626 754 127 4 1 753 461966018 461966768 0.000000e+00 664.0
29 TraesCS2A01G105200 chrUn 91.525 472 32 3 2727 3198 100218568 100218105 0.000000e+00 643.0
30 TraesCS2A01G105200 chrUn 85.920 348 46 1 1768 2112 12882190 12881843 5.040000e-98 368.0
31 TraesCS2A01G105200 chr7D 91.373 255 20 2 2728 2982 77074383 77074635 6.570000e-92 348.0
32 TraesCS2A01G105200 chr5D 93.617 235 7 3 2970 3198 220784818 220784586 8.490000e-91 344.0
33 TraesCS2A01G105200 chr5D 95.455 132 6 0 761 892 410289695 410289826 8.990000e-51 211.0
34 TraesCS2A01G105200 chr3B 91.051 257 19 4 2725 2980 808503212 808503465 8.490000e-91 344.0
35 TraesCS2A01G105200 chr5B 90.845 142 13 0 751 892 492154236 492154377 1.170000e-44 191.0
36 TraesCS2A01G105200 chr4B 87.143 140 13 4 3022 3158 401085318 401085455 1.540000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G105200 chr2A 57974277 57977474 3197 False 5906.000000 5906 100.000000 1 3198 1 chr2A.!!$F2 3197
1 TraesCS2A01G105200 chr2A 36718293 36719041 748 True 699.000000 699 83.590000 1312 2086 1 chr2A.!!$R1 774
2 TraesCS2A01G105200 chr2A 36657688 36658455 767 False 691.000000 691 83.079000 1309 2086 1 chr2A.!!$F1 777
3 TraesCS2A01G105200 chr2D 56530366 56532494 2128 False 1126.000000 1583 90.512500 885 2706 2 chr2D.!!$F1 1821
4 TraesCS2A01G105200 chr2D 33874354 33875103 749 True 676.000000 676 83.055000 1312 2086 1 chr2D.!!$R3 774
5 TraesCS2A01G105200 chr4A 590250641 590251406 765 True 1247.000000 1247 96.084000 1 764 1 chr4A.!!$R1 763
6 TraesCS2A01G105200 chr1A 560411300 560412054 754 False 1057.000000 1057 91.921000 1 755 1 chr1A.!!$F1 754
7 TraesCS2A01G105200 chr1B 642435865 642436619 754 True 1005.000000 1005 90.728000 1 754 1 chr1B.!!$R1 753
8 TraesCS2A01G105200 chr1D 65585641 65586393 752 True 726.000000 726 84.106000 1 754 1 chr1D.!!$R1 753
9 TraesCS2A01G105200 chr2B 55887886 55888637 751 False 704.000000 704 83.632000 1309 2086 1 chr2B.!!$F1 777
10 TraesCS2A01G105200 chr2B 89540271 89541909 1638 False 480.666667 507 88.466667 1288 2706 3 chr2B.!!$F6 1418
11 TraesCS2A01G105200 chr6B 461966018 461966768 750 False 664.000000 664 82.626000 1 753 1 chr6B.!!$F1 752

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
854 855 0.10741 TAACATAGCCGGCACAAGGG 60.107 55.0 31.54 13.85 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2706 3488 0.033405 TCCTCCGTTCACTCCCCTAG 60.033 60.0 0.0 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 0.795698 CAATGCGATTCACGGTGACA 59.204 50.000 10.97 5.97 42.83 3.58
82 83 1.350193 CGATTCACGGTGACAGGAAG 58.650 55.000 10.97 0.00 38.46 3.46
93 94 2.028385 GTGACAGGAAGGATACGGTGTT 60.028 50.000 0.00 0.00 46.39 3.32
184 185 0.813821 GAGACAAATGCAGAAGGGGC 59.186 55.000 0.00 0.00 0.00 5.80
207 208 2.668144 TTCCCAACCAAACCCTGTAG 57.332 50.000 0.00 0.00 0.00 2.74
275 276 1.593933 GCGTCAAGTTAAACACGGACA 59.406 47.619 0.00 0.00 35.46 4.02
538 539 2.226437 AGCTTGTTGTGCCAGTATTTCG 59.774 45.455 0.00 0.00 0.00 3.46
692 693 3.516300 TCCGGCTGACTTAAGGAATGTAA 59.484 43.478 7.53 0.00 0.00 2.41
705 706 8.737168 TTAAGGAATGTAATGAGGAATGAGTG 57.263 34.615 0.00 0.00 0.00 3.51
740 741 3.596214 ACTTAGTTTCGTGTAGCCATGG 58.404 45.455 7.63 7.63 0.00 3.66
773 774 6.884280 AAAAACATATATAGGGCTCTGCAC 57.116 37.500 0.00 0.00 0.00 4.57
774 775 4.559862 AACATATATAGGGCTCTGCACC 57.440 45.455 0.00 0.00 28.43 5.01
775 776 3.796111 ACATATATAGGGCTCTGCACCT 58.204 45.455 0.00 0.00 40.89 4.00
776 777 3.772025 ACATATATAGGGCTCTGCACCTC 59.228 47.826 0.00 0.00 38.30 3.85
777 778 1.650528 ATATAGGGCTCTGCACCTCC 58.349 55.000 0.00 0.00 38.30 4.30
778 779 0.827925 TATAGGGCTCTGCACCTCCG 60.828 60.000 0.00 0.00 38.30 4.63
779 780 2.880629 ATAGGGCTCTGCACCTCCGT 62.881 60.000 0.00 0.00 38.30 4.69
780 781 4.459089 GGGCTCTGCACCTCCGTC 62.459 72.222 0.00 0.00 0.00 4.79
781 782 4.459089 GGCTCTGCACCTCCGTCC 62.459 72.222 0.00 0.00 0.00 4.79
782 783 3.386237 GCTCTGCACCTCCGTCCT 61.386 66.667 0.00 0.00 0.00 3.85
783 784 2.888863 CTCTGCACCTCCGTCCTC 59.111 66.667 0.00 0.00 0.00 3.71
784 785 2.680352 TCTGCACCTCCGTCCTCC 60.680 66.667 0.00 0.00 0.00 4.30
785 786 4.135153 CTGCACCTCCGTCCTCCG 62.135 72.222 0.00 0.00 0.00 4.63
786 787 4.988716 TGCACCTCCGTCCTCCGT 62.989 66.667 0.00 0.00 33.66 4.69
787 788 4.436998 GCACCTCCGTCCTCCGTG 62.437 72.222 0.00 0.00 33.66 4.94
788 789 3.760035 CACCTCCGTCCTCCGTGG 61.760 72.222 0.00 0.00 35.32 4.94
789 790 3.975591 ACCTCCGTCCTCCGTGGA 61.976 66.667 0.00 0.00 43.86 4.02
796 797 2.525629 TCCTCCGTGGAGCCAACA 60.526 61.111 10.53 0.00 40.56 3.33
797 798 1.918293 TCCTCCGTGGAGCCAACAT 60.918 57.895 10.53 0.00 40.56 2.71
798 799 1.450312 CCTCCGTGGAGCCAACATC 60.450 63.158 10.53 0.00 40.69 3.06
799 800 1.296392 CTCCGTGGAGCCAACATCA 59.704 57.895 2.38 0.00 35.31 3.07
800 801 0.742281 CTCCGTGGAGCCAACATCAG 60.742 60.000 2.38 0.00 35.31 2.90
801 802 2.401766 CCGTGGAGCCAACATCAGC 61.402 63.158 0.00 0.00 0.00 4.26
802 803 2.401766 CGTGGAGCCAACATCAGCC 61.402 63.158 0.00 0.00 0.00 4.85
803 804 1.303561 GTGGAGCCAACATCAGCCA 60.304 57.895 0.00 0.00 0.00 4.75
804 805 1.303561 TGGAGCCAACATCAGCCAC 60.304 57.895 0.00 0.00 0.00 5.01
805 806 1.303561 GGAGCCAACATCAGCCACA 60.304 57.895 0.00 0.00 0.00 4.17
806 807 1.589716 GGAGCCAACATCAGCCACAC 61.590 60.000 0.00 0.00 0.00 3.82
807 808 1.589716 GAGCCAACATCAGCCACACC 61.590 60.000 0.00 0.00 0.00 4.16
808 809 1.902918 GCCAACATCAGCCACACCA 60.903 57.895 0.00 0.00 0.00 4.17
809 810 1.462731 GCCAACATCAGCCACACCAA 61.463 55.000 0.00 0.00 0.00 3.67
810 811 0.599558 CCAACATCAGCCACACCAAG 59.400 55.000 0.00 0.00 0.00 3.61
811 812 1.608055 CAACATCAGCCACACCAAGA 58.392 50.000 0.00 0.00 0.00 3.02
812 813 1.538512 CAACATCAGCCACACCAAGAG 59.461 52.381 0.00 0.00 0.00 2.85
813 814 1.059098 ACATCAGCCACACCAAGAGA 58.941 50.000 0.00 0.00 0.00 3.10
814 815 1.271054 ACATCAGCCACACCAAGAGAC 60.271 52.381 0.00 0.00 0.00 3.36
815 816 0.326264 ATCAGCCACACCAAGAGACC 59.674 55.000 0.00 0.00 0.00 3.85
816 817 1.669115 CAGCCACACCAAGAGACCG 60.669 63.158 0.00 0.00 0.00 4.79
817 818 2.140792 AGCCACACCAAGAGACCGT 61.141 57.895 0.00 0.00 0.00 4.83
818 819 1.961277 GCCACACCAAGAGACCGTG 60.961 63.158 0.00 0.00 0.00 4.94
819 820 1.301716 CCACACCAAGAGACCGTGG 60.302 63.158 0.00 0.00 45.71 4.94
820 821 1.961277 CACACCAAGAGACCGTGGC 60.961 63.158 0.00 0.00 44.37 5.01
821 822 2.738521 CACCAAGAGACCGTGGCG 60.739 66.667 0.00 0.00 44.37 5.69
822 823 3.231736 ACCAAGAGACCGTGGCGT 61.232 61.111 0.00 0.00 44.37 5.68
823 824 2.030562 CCAAGAGACCGTGGCGTT 59.969 61.111 0.00 0.00 35.26 4.84
824 825 2.317609 CCAAGAGACCGTGGCGTTG 61.318 63.158 0.00 0.00 35.26 4.10
825 826 2.030562 AAGAGACCGTGGCGTTGG 59.969 61.111 0.00 0.00 0.00 3.77
826 827 2.803817 AAGAGACCGTGGCGTTGGT 61.804 57.895 0.00 0.00 42.42 3.67
827 828 2.989055 AAGAGACCGTGGCGTTGGTG 62.989 60.000 0.00 0.00 38.99 4.17
828 829 3.802418 GAGACCGTGGCGTTGGTGT 62.802 63.158 0.00 0.00 38.99 4.16
829 830 3.645975 GACCGTGGCGTTGGTGTG 61.646 66.667 0.00 0.00 38.99 3.82
836 837 2.281208 GCGTTGGTGTGGCCTGTA 60.281 61.111 3.32 0.00 38.35 2.74
837 838 1.894756 GCGTTGGTGTGGCCTGTAA 60.895 57.895 3.32 0.00 38.35 2.41
838 839 1.946267 CGTTGGTGTGGCCTGTAAC 59.054 57.895 3.32 1.67 38.35 2.50
839 840 0.816018 CGTTGGTGTGGCCTGTAACA 60.816 55.000 3.32 0.00 38.35 2.41
840 841 1.616159 GTTGGTGTGGCCTGTAACAT 58.384 50.000 3.32 0.00 38.35 2.71
841 842 2.785562 GTTGGTGTGGCCTGTAACATA 58.214 47.619 3.32 0.00 38.35 2.29
842 843 2.747446 GTTGGTGTGGCCTGTAACATAG 59.253 50.000 3.32 0.00 38.35 2.23
843 844 1.339631 TGGTGTGGCCTGTAACATAGC 60.340 52.381 3.32 0.00 38.35 2.97
844 845 1.379527 GTGTGGCCTGTAACATAGCC 58.620 55.000 3.32 3.23 45.96 3.93
846 847 4.456806 GGCCTGTAACATAGCCGG 57.543 61.111 0.00 0.00 35.30 6.13
847 848 1.892391 GGCCTGTAACATAGCCGGC 60.892 63.158 21.89 21.89 35.30 6.13
848 849 1.153249 GCCTGTAACATAGCCGGCA 60.153 57.895 31.54 15.56 37.48 5.69
849 850 1.436983 GCCTGTAACATAGCCGGCAC 61.437 60.000 31.54 17.61 37.48 5.01
850 851 0.107897 CCTGTAACATAGCCGGCACA 60.108 55.000 31.54 21.46 0.00 4.57
851 852 1.677518 CCTGTAACATAGCCGGCACAA 60.678 52.381 31.54 14.46 0.00 3.33
852 853 1.665679 CTGTAACATAGCCGGCACAAG 59.334 52.381 31.54 17.63 0.00 3.16
853 854 1.014352 GTAACATAGCCGGCACAAGG 58.986 55.000 31.54 17.65 0.00 3.61
854 855 0.107410 TAACATAGCCGGCACAAGGG 60.107 55.000 31.54 13.85 0.00 3.95
855 856 1.847798 AACATAGCCGGCACAAGGGA 61.848 55.000 31.54 4.42 0.00 4.20
856 857 1.524621 CATAGCCGGCACAAGGGAG 60.525 63.158 31.54 5.19 0.00 4.30
857 858 1.689233 ATAGCCGGCACAAGGGAGA 60.689 57.895 31.54 1.67 0.00 3.71
858 859 1.271840 ATAGCCGGCACAAGGGAGAA 61.272 55.000 31.54 0.22 0.00 2.87
859 860 2.180159 TAGCCGGCACAAGGGAGAAC 62.180 60.000 31.54 0.00 0.00 3.01
860 861 2.359975 CCGGCACAAGGGAGAACC 60.360 66.667 0.00 0.00 40.67 3.62
873 874 3.536570 GGGAGAACCTACTCAAATCAGC 58.463 50.000 0.00 0.00 38.51 4.26
874 875 3.536570 GGAGAACCTACTCAAATCAGCC 58.463 50.000 0.00 0.00 38.51 4.85
875 876 3.198853 GGAGAACCTACTCAAATCAGCCT 59.801 47.826 0.00 0.00 38.51 4.58
876 877 4.438148 GAGAACCTACTCAAATCAGCCTC 58.562 47.826 0.00 0.00 36.95 4.70
877 878 3.198853 AGAACCTACTCAAATCAGCCTCC 59.801 47.826 0.00 0.00 0.00 4.30
878 879 1.482593 ACCTACTCAAATCAGCCTCCG 59.517 52.381 0.00 0.00 0.00 4.63
879 880 1.576356 CTACTCAAATCAGCCTCCGC 58.424 55.000 0.00 0.00 0.00 5.54
880 881 0.178068 TACTCAAATCAGCCTCCGCC 59.822 55.000 0.00 0.00 34.57 6.13
881 882 1.821332 CTCAAATCAGCCTCCGCCC 60.821 63.158 0.00 0.00 34.57 6.13
882 883 3.204827 CAAATCAGCCTCCGCCCG 61.205 66.667 0.00 0.00 34.57 6.13
908 909 2.493278 AGAAATTTGACCCCTGCGAATG 59.507 45.455 0.00 0.00 0.00 2.67
913 914 3.011517 ACCCCTGCGAATGAGCCT 61.012 61.111 0.00 0.00 36.02 4.58
925 926 3.610114 CGAATGAGCCTTGAACAAAGTGG 60.610 47.826 0.00 0.00 33.66 4.00
928 929 3.360867 TGAGCCTTGAACAAAGTGGAAA 58.639 40.909 0.00 0.00 33.66 3.13
930 931 4.221703 TGAGCCTTGAACAAAGTGGAAAAA 59.778 37.500 0.00 0.00 33.66 1.94
956 957 1.327303 GATCAGGGTGCGATCTCTCT 58.673 55.000 0.00 0.00 37.01 3.10
957 958 1.686052 GATCAGGGTGCGATCTCTCTT 59.314 52.381 0.00 0.00 37.01 2.85
1009 1010 1.808945 GCTTGCTAGCACACACATCTT 59.191 47.619 19.17 0.00 46.95 2.40
1011 1012 3.332919 CTTGCTAGCACACACATCTTCT 58.667 45.455 19.17 0.00 0.00 2.85
1012 1013 2.691927 TGCTAGCACACACATCTTCTG 58.308 47.619 14.93 0.00 0.00 3.02
1013 1014 2.299867 TGCTAGCACACACATCTTCTGA 59.700 45.455 14.93 0.00 0.00 3.27
1025 1027 8.051535 ACACACATCTTCTGATCTATTTCCAAT 58.948 33.333 0.00 0.00 0.00 3.16
1046 1048 6.765512 CCAATTCATTCTCTTCTTCCTCTACC 59.234 42.308 0.00 0.00 0.00 3.18
1055 1057 0.662085 CTTCCTCTACCTACGCGGAC 59.338 60.000 12.47 0.00 36.31 4.79
1061 1063 0.742505 CTACCTACGCGGACCAATCA 59.257 55.000 12.47 0.00 36.31 2.57
1066 1068 3.192844 ACCTACGCGGACCAATCATATAG 59.807 47.826 12.47 0.00 36.31 1.31
1067 1069 2.743636 ACGCGGACCAATCATATAGG 57.256 50.000 12.47 0.00 0.00 2.57
1068 1070 2.244695 ACGCGGACCAATCATATAGGA 58.755 47.619 12.47 0.00 0.00 2.94
1069 1071 2.231478 ACGCGGACCAATCATATAGGAG 59.769 50.000 12.47 0.00 0.00 3.69
1071 1073 3.442625 CGCGGACCAATCATATAGGAGTA 59.557 47.826 0.00 0.00 0.00 2.59
1072 1074 4.098044 CGCGGACCAATCATATAGGAGTAT 59.902 45.833 0.00 0.00 0.00 2.12
1073 1075 5.593010 GCGGACCAATCATATAGGAGTATC 58.407 45.833 0.00 0.00 0.00 2.24
1076 1078 6.458478 CGGACCAATCATATAGGAGTATCGTC 60.458 46.154 0.00 0.00 33.79 4.20
1084 1086 0.680280 AGGAGTATCGTCCACTGCGT 60.680 55.000 0.00 0.00 39.16 5.24
1098 1100 2.099062 GCGTGCATGGCTTCTTCG 59.901 61.111 8.27 0.00 0.00 3.79
1112 1114 1.405461 TCTTCGTTCTTCGTCGCTTG 58.595 50.000 0.00 0.00 40.80 4.01
1113 1115 1.129326 CTTCGTTCTTCGTCGCTTGT 58.871 50.000 0.00 0.00 40.80 3.16
1115 1117 0.248743 TCGTTCTTCGTCGCTTGTGT 60.249 50.000 0.00 0.00 40.80 3.72
1176 1178 1.289066 CGTCTCAGGTTGGCTCGAA 59.711 57.895 0.00 0.00 0.00 3.71
1202 1204 0.384309 GCGACGTGGTATGATCTCCA 59.616 55.000 0.00 0.00 0.00 3.86
1233 1235 1.337823 GGCACTGGCGGTAGGTATATG 60.338 57.143 0.00 0.00 42.47 1.78
1243 1245 2.618053 GTAGGTATATGGTCGCATGGC 58.382 52.381 0.00 0.00 0.00 4.40
1256 1259 1.956802 CATGGCGATGCATGCAGAT 59.043 52.632 26.69 10.42 0.00 2.90
1278 1282 1.214923 TCCATGATAAGGGTGCATGCA 59.785 47.619 18.46 18.46 38.40 3.96
1292 1296 0.654160 CATGCATGCTAGGACGTGTG 59.346 55.000 20.33 0.43 0.00 3.82
1301 1305 1.540267 CTAGGACGTGTGTACAGCAGT 59.460 52.381 0.00 0.00 0.00 4.40
1306 1310 3.367025 GGACGTGTGTACAGCAGTTATTC 59.633 47.826 0.00 0.00 0.00 1.75
1310 1328 3.739300 GTGTGTACAGCAGTTATTCACGT 59.261 43.478 0.00 0.00 0.00 4.49
1634 1653 2.808958 CGACGCCGGCAACATTAGG 61.809 63.158 28.98 9.93 0.00 2.69
1664 1683 0.465824 ACCGGTATGCTCTCGCTAGT 60.466 55.000 4.49 0.00 36.97 2.57
1670 1689 2.791383 ATGCTCTCGCTAGTTAGCTG 57.209 50.000 9.28 3.74 46.85 4.24
1681 1705 2.668212 TTAGCTGGCGCACACACC 60.668 61.111 10.83 0.00 39.10 4.16
1696 1725 2.937689 ACCCATGCCCAGTGCTCT 60.938 61.111 0.00 0.00 42.00 4.09
1719 1748 0.873721 TCCATGCATGTTCGTGTGTG 59.126 50.000 24.58 6.69 0.00 3.82
1721 1750 1.469703 CCATGCATGTTCGTGTGTGAT 59.530 47.619 24.58 0.00 0.00 3.06
1722 1751 2.677337 CCATGCATGTTCGTGTGTGATA 59.323 45.455 24.58 0.00 0.00 2.15
1723 1752 3.485711 CCATGCATGTTCGTGTGTGATAC 60.486 47.826 24.58 0.00 0.00 2.24
1725 1754 2.736192 TGCATGTTCGTGTGTGATACTG 59.264 45.455 0.00 0.00 0.00 2.74
1726 1755 2.736721 GCATGTTCGTGTGTGATACTGT 59.263 45.455 0.00 0.00 0.00 3.55
1727 1756 3.423515 GCATGTTCGTGTGTGATACTGTG 60.424 47.826 0.00 0.00 0.00 3.66
1728 1757 2.131972 TGTTCGTGTGTGATACTGTGC 58.868 47.619 0.00 0.00 0.00 4.57
1749 2109 4.023536 TGCATCCATCGATCATTTGTCATG 60.024 41.667 0.00 0.00 0.00 3.07
1761 2121 7.219535 CGATCATTTGTCATGTCTTTGATTTCC 59.780 37.037 0.00 0.00 0.00 3.13
1764 2124 5.964958 TTGTCATGTCTTTGATTTCCTCC 57.035 39.130 0.00 0.00 0.00 4.30
1857 2269 3.683587 CTCGCGGTGCTCATCGACA 62.684 63.158 6.13 0.00 37.01 4.35
1962 2383 1.069513 CGGTGTGGAAGTACAACTCCA 59.930 52.381 7.15 7.15 36.13 3.86
1963 2384 2.289444 CGGTGTGGAAGTACAACTCCAT 60.289 50.000 12.79 0.00 36.13 3.41
1968 2389 2.028476 TGGAAGTACAACTCCATGTCCG 60.028 50.000 7.15 0.00 34.75 4.79
2072 2493 2.183555 GCCGACAAGACCTACCGG 59.816 66.667 0.00 0.00 42.74 5.28
2132 2558 8.136165 GTCTGTAGGATCGAGTATGTGTTAATT 58.864 37.037 0.00 0.00 0.00 1.40
2133 2559 8.350722 TCTGTAGGATCGAGTATGTGTTAATTC 58.649 37.037 0.00 0.00 0.00 2.17
2134 2560 8.002984 TGTAGGATCGAGTATGTGTTAATTCA 57.997 34.615 0.00 0.00 0.00 2.57
2135 2561 7.919091 TGTAGGATCGAGTATGTGTTAATTCAC 59.081 37.037 0.00 0.00 38.63 3.18
2156 2582 0.108233 TTGTATTCCGGCCGTGTACC 60.108 55.000 26.12 9.41 0.00 3.34
2159 2585 0.176219 TATTCCGGCCGTGTACCTTG 59.824 55.000 26.12 5.84 0.00 3.61
2163 2589 1.079405 CGGCCGTGTACCTTGTGAT 60.079 57.895 19.50 0.00 0.00 3.06
2165 2591 1.644786 GGCCGTGTACCTTGTGATGC 61.645 60.000 0.00 0.00 0.00 3.91
2180 2606 9.745018 ACCTTGTGATGCTGCTTTATATATAAT 57.255 29.630 6.01 0.00 0.00 1.28
2227 2659 3.007635 GTGTTAATTAGCTCCGTGCCTT 58.992 45.455 0.00 0.00 44.23 4.35
2290 3060 6.514947 TGCTTGAAAGATTGCAACTAACATT 58.485 32.000 0.00 0.00 32.12 2.71
2293 3063 9.143631 GCTTGAAAGATTGCAACTAACATTAAT 57.856 29.630 0.00 0.00 0.00 1.40
2325 3095 3.733443 GCCTGAAATATTTGGCGGATT 57.267 42.857 12.36 0.00 35.79 3.01
2326 3096 3.383761 GCCTGAAATATTTGGCGGATTG 58.616 45.455 12.36 0.00 35.79 2.67
2373 3146 2.717639 ACCTCAAGATTAGCGCCAAT 57.282 45.000 2.29 0.56 0.00 3.16
2375 3148 3.356290 ACCTCAAGATTAGCGCCAATTT 58.644 40.909 2.29 0.00 0.00 1.82
2376 3149 3.763897 ACCTCAAGATTAGCGCCAATTTT 59.236 39.130 2.29 0.01 0.00 1.82
2537 3319 8.696410 TCAACTCCAAAAACATCAAAACTTAC 57.304 30.769 0.00 0.00 0.00 2.34
2658 3440 4.408821 GGCGTGCATGGGACAGGA 62.409 66.667 8.27 0.00 46.40 3.86
2709 3491 3.470888 CCGGGCACAGGGGACTAG 61.471 72.222 0.00 0.00 40.98 2.57
2710 3492 3.470888 CGGGCACAGGGGACTAGG 61.471 72.222 0.00 0.00 40.21 3.02
2711 3493 3.090532 GGGCACAGGGGACTAGGG 61.091 72.222 0.00 0.00 40.21 3.53
2712 3494 3.090532 GGCACAGGGGACTAGGGG 61.091 72.222 0.00 0.00 40.21 4.79
2713 3495 2.040606 GCACAGGGGACTAGGGGA 59.959 66.667 0.00 0.00 40.21 4.81
2714 3496 2.066999 GCACAGGGGACTAGGGGAG 61.067 68.421 0.00 0.00 40.21 4.30
2715 3497 1.392534 CACAGGGGACTAGGGGAGT 59.607 63.158 0.00 0.00 42.90 3.85
2716 3498 0.978146 CACAGGGGACTAGGGGAGTG 60.978 65.000 0.00 0.00 39.06 3.51
2717 3499 1.153695 ACAGGGGACTAGGGGAGTGA 61.154 60.000 0.00 0.00 39.06 3.41
2718 3500 0.042731 CAGGGGACTAGGGGAGTGAA 59.957 60.000 0.00 0.00 39.06 3.18
2719 3501 0.042881 AGGGGACTAGGGGAGTGAAC 59.957 60.000 0.00 0.00 39.06 3.18
2720 3502 1.328430 GGGGACTAGGGGAGTGAACG 61.328 65.000 0.00 0.00 39.06 3.95
2721 3503 1.328430 GGGACTAGGGGAGTGAACGG 61.328 65.000 0.00 0.00 39.06 4.44
2722 3504 0.324091 GGACTAGGGGAGTGAACGGA 60.324 60.000 0.00 0.00 39.06 4.69
2723 3505 1.104630 GACTAGGGGAGTGAACGGAG 58.895 60.000 0.00 0.00 39.06 4.63
2724 3506 0.324460 ACTAGGGGAGTGAACGGAGG 60.324 60.000 0.00 0.00 36.87 4.30
2725 3507 0.033405 CTAGGGGAGTGAACGGAGGA 60.033 60.000 0.00 0.00 0.00 3.71
2726 3508 0.324091 TAGGGGAGTGAACGGAGGAC 60.324 60.000 0.00 0.00 0.00 3.85
2765 3547 5.371115 AACTACCACATTTCATGAAACCG 57.629 39.130 22.71 18.18 32.51 4.44
2766 3548 4.394729 ACTACCACATTTCATGAAACCGT 58.605 39.130 22.71 18.79 32.51 4.83
2767 3549 5.553123 ACTACCACATTTCATGAAACCGTA 58.447 37.500 22.71 16.96 32.51 4.02
2768 3550 4.759516 ACCACATTTCATGAAACCGTAC 57.240 40.909 22.71 0.00 32.51 3.67
2769 3551 3.504520 ACCACATTTCATGAAACCGTACC 59.495 43.478 22.71 0.00 32.51 3.34
2770 3552 3.756434 CCACATTTCATGAAACCGTACCT 59.244 43.478 22.71 2.70 32.51 3.08
2771 3553 4.938832 CCACATTTCATGAAACCGTACCTA 59.061 41.667 22.71 0.00 32.51 3.08
2772 3554 5.163794 CCACATTTCATGAAACCGTACCTAC 60.164 44.000 22.71 0.00 32.51 3.18
2773 3555 5.410132 CACATTTCATGAAACCGTACCTACA 59.590 40.000 22.71 0.00 32.51 2.74
2774 3556 5.998981 ACATTTCATGAAACCGTACCTACAA 59.001 36.000 22.71 0.00 32.51 2.41
2775 3557 6.487331 ACATTTCATGAAACCGTACCTACAAA 59.513 34.615 22.71 0.00 32.51 2.83
2776 3558 5.927954 TTCATGAAACCGTACCTACAAAC 57.072 39.130 5.45 0.00 0.00 2.93
2777 3559 5.217978 TCATGAAACCGTACCTACAAACT 57.782 39.130 0.00 0.00 0.00 2.66
2778 3560 6.343716 TCATGAAACCGTACCTACAAACTA 57.656 37.500 0.00 0.00 0.00 2.24
2779 3561 6.938507 TCATGAAACCGTACCTACAAACTAT 58.061 36.000 0.00 0.00 0.00 2.12
2780 3562 7.037438 TCATGAAACCGTACCTACAAACTATC 58.963 38.462 0.00 0.00 0.00 2.08
2781 3563 6.343716 TGAAACCGTACCTACAAACTATCA 57.656 37.500 0.00 0.00 0.00 2.15
2782 3564 6.158598 TGAAACCGTACCTACAAACTATCAC 58.841 40.000 0.00 0.00 0.00 3.06
2783 3565 5.990120 AACCGTACCTACAAACTATCACT 57.010 39.130 0.00 0.00 0.00 3.41
2784 3566 5.573337 ACCGTACCTACAAACTATCACTC 57.427 43.478 0.00 0.00 0.00 3.51
2785 3567 5.259632 ACCGTACCTACAAACTATCACTCT 58.740 41.667 0.00 0.00 0.00 3.24
2786 3568 6.418101 ACCGTACCTACAAACTATCACTCTA 58.582 40.000 0.00 0.00 0.00 2.43
2787 3569 7.059156 ACCGTACCTACAAACTATCACTCTAT 58.941 38.462 0.00 0.00 0.00 1.98
2788 3570 8.213679 ACCGTACCTACAAACTATCACTCTATA 58.786 37.037 0.00 0.00 0.00 1.31
2789 3571 9.060347 CCGTACCTACAAACTATCACTCTATAA 57.940 37.037 0.00 0.00 0.00 0.98
2847 3629 8.251750 TCTTTGACTAAAAACTATCATGTCGG 57.748 34.615 0.00 0.00 0.00 4.79
2848 3630 8.092068 TCTTTGACTAAAAACTATCATGTCGGA 58.908 33.333 0.00 0.00 0.00 4.55
2849 3631 8.610248 TTTGACTAAAAACTATCATGTCGGAA 57.390 30.769 0.00 0.00 0.00 4.30
2850 3632 8.610248 TTGACTAAAAACTATCATGTCGGAAA 57.390 30.769 0.00 0.00 0.00 3.13
2851 3633 8.610248 TGACTAAAAACTATCATGTCGGAAAA 57.390 30.769 0.00 0.00 0.00 2.29
2852 3634 8.717821 TGACTAAAAACTATCATGTCGGAAAAG 58.282 33.333 0.00 0.00 0.00 2.27
2853 3635 8.617290 ACTAAAAACTATCATGTCGGAAAAGT 57.383 30.769 0.00 0.00 0.00 2.66
2854 3636 8.504005 ACTAAAAACTATCATGTCGGAAAAGTG 58.496 33.333 0.00 0.00 0.00 3.16
2855 3637 4.946784 AACTATCATGTCGGAAAAGTGC 57.053 40.909 0.00 0.00 0.00 4.40
2856 3638 3.270877 ACTATCATGTCGGAAAAGTGCC 58.729 45.455 0.00 0.00 0.00 5.01
2857 3639 1.463674 ATCATGTCGGAAAAGTGCCC 58.536 50.000 0.00 0.00 0.00 5.36
2858 3640 0.109532 TCATGTCGGAAAAGTGCCCA 59.890 50.000 0.00 0.00 0.00 5.36
2859 3641 0.958091 CATGTCGGAAAAGTGCCCAA 59.042 50.000 0.00 0.00 0.00 4.12
2860 3642 1.545582 CATGTCGGAAAAGTGCCCAAT 59.454 47.619 0.00 0.00 0.00 3.16
2861 3643 1.698506 TGTCGGAAAAGTGCCCAATT 58.301 45.000 0.00 0.00 0.00 2.32
2862 3644 1.611491 TGTCGGAAAAGTGCCCAATTC 59.389 47.619 0.00 0.00 0.00 2.17
2863 3645 0.878416 TCGGAAAAGTGCCCAATTCG 59.122 50.000 0.00 0.00 0.00 3.34
2864 3646 0.732538 CGGAAAAGTGCCCAATTCGC 60.733 55.000 0.00 0.00 0.00 4.70
2865 3647 0.389817 GGAAAAGTGCCCAATTCGCC 60.390 55.000 0.00 0.00 0.00 5.54
2866 3648 0.603065 GAAAAGTGCCCAATTCGCCT 59.397 50.000 0.00 0.00 0.00 5.52
2867 3649 0.603065 AAAAGTGCCCAATTCGCCTC 59.397 50.000 0.00 0.00 0.00 4.70
2868 3650 0.251341 AAAGTGCCCAATTCGCCTCT 60.251 50.000 0.00 0.00 0.00 3.69
2869 3651 0.251341 AAGTGCCCAATTCGCCTCTT 60.251 50.000 0.00 0.00 0.00 2.85
2870 3652 0.678048 AGTGCCCAATTCGCCTCTTC 60.678 55.000 0.00 0.00 0.00 2.87
2871 3653 0.678048 GTGCCCAATTCGCCTCTTCT 60.678 55.000 0.00 0.00 0.00 2.85
2872 3654 0.908910 TGCCCAATTCGCCTCTTCTA 59.091 50.000 0.00 0.00 0.00 2.10
2873 3655 1.280710 TGCCCAATTCGCCTCTTCTAA 59.719 47.619 0.00 0.00 0.00 2.10
2874 3656 2.290641 TGCCCAATTCGCCTCTTCTAAA 60.291 45.455 0.00 0.00 0.00 1.85
2875 3657 2.097629 GCCCAATTCGCCTCTTCTAAAC 59.902 50.000 0.00 0.00 0.00 2.01
2876 3658 2.351726 CCCAATTCGCCTCTTCTAAACG 59.648 50.000 0.00 0.00 0.00 3.60
2877 3659 2.223044 CCAATTCGCCTCTTCTAAACGC 60.223 50.000 0.00 0.00 0.00 4.84
2878 3660 1.653151 ATTCGCCTCTTCTAAACGCC 58.347 50.000 0.00 0.00 0.00 5.68
2879 3661 0.606604 TTCGCCTCTTCTAAACGCCT 59.393 50.000 0.00 0.00 0.00 5.52
2880 3662 0.606604 TCGCCTCTTCTAAACGCCTT 59.393 50.000 0.00 0.00 0.00 4.35
2881 3663 1.001633 TCGCCTCTTCTAAACGCCTTT 59.998 47.619 0.00 0.00 0.00 3.11
2882 3664 1.393883 CGCCTCTTCTAAACGCCTTTC 59.606 52.381 0.00 0.00 0.00 2.62
2883 3665 2.701107 GCCTCTTCTAAACGCCTTTCT 58.299 47.619 0.00 0.00 0.00 2.52
2884 3666 2.416893 GCCTCTTCTAAACGCCTTTCTG 59.583 50.000 0.00 0.00 0.00 3.02
2885 3667 3.864921 GCCTCTTCTAAACGCCTTTCTGA 60.865 47.826 0.00 0.00 0.00 3.27
2886 3668 3.680458 CCTCTTCTAAACGCCTTTCTGAC 59.320 47.826 0.00 0.00 0.00 3.51
2887 3669 4.307432 CTCTTCTAAACGCCTTTCTGACA 58.693 43.478 0.00 0.00 0.00 3.58
2888 3670 4.307432 TCTTCTAAACGCCTTTCTGACAG 58.693 43.478 0.00 0.00 0.00 3.51
2889 3671 3.040147 TCTAAACGCCTTTCTGACAGG 57.960 47.619 5.47 5.47 34.08 4.00
2890 3672 2.631062 TCTAAACGCCTTTCTGACAGGA 59.369 45.455 13.93 0.00 32.41 3.86
2891 3673 2.568623 AAACGCCTTTCTGACAGGAT 57.431 45.000 13.93 0.00 32.41 3.24
2892 3674 1.813513 AACGCCTTTCTGACAGGATG 58.186 50.000 13.93 7.40 46.00 3.51
2893 3675 0.036010 ACGCCTTTCTGACAGGATGG 60.036 55.000 13.93 10.76 43.62 3.51
2894 3676 0.745845 CGCCTTTCTGACAGGATGGG 60.746 60.000 13.93 8.04 43.62 4.00
2895 3677 1.034292 GCCTTTCTGACAGGATGGGC 61.034 60.000 13.93 13.35 43.62 5.36
2896 3678 0.394899 CCTTTCTGACAGGATGGGCC 60.395 60.000 3.72 0.00 43.62 5.80
2897 3679 0.394899 CTTTCTGACAGGATGGGCCC 60.395 60.000 17.59 17.59 43.62 5.80
2898 3680 1.139498 TTTCTGACAGGATGGGCCCA 61.139 55.000 30.92 30.92 43.62 5.36
2899 3681 1.852157 TTCTGACAGGATGGGCCCAC 61.852 60.000 31.51 21.00 43.62 4.61
2900 3682 3.338250 TGACAGGATGGGCCCACC 61.338 66.667 31.51 28.77 43.62 4.61
2901 3683 3.017581 GACAGGATGGGCCCACCT 61.018 66.667 31.51 30.51 43.62 4.00
2903 3685 3.341629 CAGGATGGGCCCACCTGT 61.342 66.667 39.15 25.08 44.06 4.00
2904 3686 3.017581 AGGATGGGCCCACCTGTC 61.018 66.667 32.90 24.78 41.11 3.51
2905 3687 3.338250 GGATGGGCCCACCTGTCA 61.338 66.667 31.51 0.96 41.11 3.58
2906 3688 2.273449 GATGGGCCCACCTGTCAG 59.727 66.667 31.51 0.00 41.11 3.51
2907 3689 2.532715 ATGGGCCCACCTGTCAGT 60.533 61.111 31.51 5.23 41.11 3.41
2908 3690 1.229820 ATGGGCCCACCTGTCAGTA 60.230 57.895 31.51 0.00 41.11 2.74
2909 3691 0.624500 ATGGGCCCACCTGTCAGTAT 60.625 55.000 31.51 3.31 41.11 2.12
2910 3692 0.844661 TGGGCCCACCTGTCAGTATT 60.845 55.000 24.45 0.00 41.11 1.89
2911 3693 1.209621 GGGCCCACCTGTCAGTATTA 58.790 55.000 19.95 0.00 35.85 0.98
2912 3694 1.562475 GGGCCCACCTGTCAGTATTAA 59.438 52.381 19.95 0.00 35.85 1.40
2913 3695 2.174854 GGGCCCACCTGTCAGTATTAAT 59.825 50.000 19.95 0.00 35.85 1.40
2914 3696 3.477530 GGCCCACCTGTCAGTATTAATC 58.522 50.000 0.00 0.00 0.00 1.75
2915 3697 3.136626 GGCCCACCTGTCAGTATTAATCT 59.863 47.826 0.00 0.00 0.00 2.40
2916 3698 4.385310 GGCCCACCTGTCAGTATTAATCTT 60.385 45.833 0.00 0.00 0.00 2.40
2917 3699 4.816925 GCCCACCTGTCAGTATTAATCTTC 59.183 45.833 0.00 0.00 0.00 2.87
2918 3700 5.396884 GCCCACCTGTCAGTATTAATCTTCT 60.397 44.000 0.00 0.00 0.00 2.85
2919 3701 6.653989 CCCACCTGTCAGTATTAATCTTCTT 58.346 40.000 0.00 0.00 0.00 2.52
2920 3702 6.763610 CCCACCTGTCAGTATTAATCTTCTTC 59.236 42.308 0.00 0.00 0.00 2.87
2921 3703 6.763610 CCACCTGTCAGTATTAATCTTCTTCC 59.236 42.308 0.00 0.00 0.00 3.46
2922 3704 7.365117 CCACCTGTCAGTATTAATCTTCTTCCT 60.365 40.741 0.00 0.00 0.00 3.36
2923 3705 7.708752 CACCTGTCAGTATTAATCTTCTTCCTC 59.291 40.741 0.00 0.00 0.00 3.71
2924 3706 7.147637 ACCTGTCAGTATTAATCTTCTTCCTCC 60.148 40.741 0.00 0.00 0.00 4.30
2925 3707 7.070571 CCTGTCAGTATTAATCTTCTTCCTCCT 59.929 40.741 0.00 0.00 0.00 3.69
2926 3708 8.012957 TGTCAGTATTAATCTTCTTCCTCCTC 57.987 38.462 0.00 0.00 0.00 3.71
2927 3709 7.841729 TGTCAGTATTAATCTTCTTCCTCCTCT 59.158 37.037 0.00 0.00 0.00 3.69
2928 3710 8.357402 GTCAGTATTAATCTTCTTCCTCCTCTC 58.643 40.741 0.00 0.00 0.00 3.20
2929 3711 8.285891 TCAGTATTAATCTTCTTCCTCCTCTCT 58.714 37.037 0.00 0.00 0.00 3.10
2930 3712 8.923270 CAGTATTAATCTTCTTCCTCCTCTCTT 58.077 37.037 0.00 0.00 0.00 2.85
2931 3713 9.500701 AGTATTAATCTTCTTCCTCCTCTCTTT 57.499 33.333 0.00 0.00 0.00 2.52
2932 3714 9.758651 GTATTAATCTTCTTCCTCCTCTCTTTC 57.241 37.037 0.00 0.00 0.00 2.62
2933 3715 8.622572 ATTAATCTTCTTCCTCCTCTCTTTCT 57.377 34.615 0.00 0.00 0.00 2.52
2934 3716 5.937975 ATCTTCTTCCTCCTCTCTTTCTG 57.062 43.478 0.00 0.00 0.00 3.02
2935 3717 4.093011 TCTTCTTCCTCCTCTCTTTCTGG 58.907 47.826 0.00 0.00 0.00 3.86
2936 3718 2.183679 TCTTCCTCCTCTCTTTCTGGC 58.816 52.381 0.00 0.00 0.00 4.85
2937 3719 1.905215 CTTCCTCCTCTCTTTCTGGCA 59.095 52.381 0.00 0.00 0.00 4.92
2938 3720 2.260639 TCCTCCTCTCTTTCTGGCAT 57.739 50.000 0.00 0.00 0.00 4.40
2939 3721 2.555664 TCCTCCTCTCTTTCTGGCATT 58.444 47.619 0.00 0.00 0.00 3.56
2940 3722 2.915604 TCCTCCTCTCTTTCTGGCATTT 59.084 45.455 0.00 0.00 0.00 2.32
2941 3723 3.054802 TCCTCCTCTCTTTCTGGCATTTC 60.055 47.826 0.00 0.00 0.00 2.17
2942 3724 3.277715 CTCCTCTCTTTCTGGCATTTCC 58.722 50.000 0.00 0.00 0.00 3.13
2943 3725 2.915604 TCCTCTCTTTCTGGCATTTCCT 59.084 45.455 0.00 0.00 35.26 3.36
2944 3726 3.054802 TCCTCTCTTTCTGGCATTTCCTC 60.055 47.826 0.00 0.00 35.26 3.71
2945 3727 3.307975 CCTCTCTTTCTGGCATTTCCTCA 60.308 47.826 0.00 0.00 35.26 3.86
2946 3728 4.330250 CTCTCTTTCTGGCATTTCCTCAA 58.670 43.478 0.00 0.00 35.26 3.02
2947 3729 4.728772 TCTCTTTCTGGCATTTCCTCAAA 58.271 39.130 0.00 0.00 35.26 2.69
2948 3730 4.520492 TCTCTTTCTGGCATTTCCTCAAAC 59.480 41.667 0.00 0.00 35.26 2.93
2949 3731 4.214310 TCTTTCTGGCATTTCCTCAAACA 58.786 39.130 0.00 0.00 35.26 2.83
2950 3732 4.834496 TCTTTCTGGCATTTCCTCAAACAT 59.166 37.500 0.00 0.00 35.26 2.71
2951 3733 5.305128 TCTTTCTGGCATTTCCTCAAACATT 59.695 36.000 0.00 0.00 35.26 2.71
2952 3734 5.549742 TTCTGGCATTTCCTCAAACATTT 57.450 34.783 0.00 0.00 35.26 2.32
2953 3735 5.138125 TCTGGCATTTCCTCAAACATTTC 57.862 39.130 0.00 0.00 35.26 2.17
2954 3736 4.588106 TCTGGCATTTCCTCAAACATTTCA 59.412 37.500 0.00 0.00 35.26 2.69
2955 3737 5.246656 TCTGGCATTTCCTCAAACATTTCAT 59.753 36.000 0.00 0.00 35.26 2.57
2956 3738 5.239351 TGGCATTTCCTCAAACATTTCATG 58.761 37.500 0.00 0.00 35.26 3.07
2957 3739 5.221682 TGGCATTTCCTCAAACATTTCATGT 60.222 36.000 0.00 0.00 39.66 3.21
2958 3740 5.121142 GGCATTTCCTCAAACATTTCATGTG 59.879 40.000 0.00 0.00 44.07 3.21
2959 3741 5.390145 GCATTTCCTCAAACATTTCATGTGC 60.390 40.000 0.00 0.00 44.07 4.57
2960 3742 4.933505 TTCCTCAAACATTTCATGTGCA 57.066 36.364 0.00 0.00 44.07 4.57
2961 3743 4.241590 TCCTCAAACATTTCATGTGCAC 57.758 40.909 10.75 10.75 44.07 4.57
2962 3744 3.890756 TCCTCAAACATTTCATGTGCACT 59.109 39.130 19.41 0.15 44.07 4.40
2963 3745 4.022935 TCCTCAAACATTTCATGTGCACTC 60.023 41.667 19.41 0.00 44.07 3.51
2964 3746 4.232221 CTCAAACATTTCATGTGCACTCC 58.768 43.478 19.41 0.00 44.07 3.85
2965 3747 2.981805 CAAACATTTCATGTGCACTCCG 59.018 45.455 19.41 6.40 44.07 4.63
2966 3748 0.523072 ACATTTCATGTGCACTCCGC 59.477 50.000 19.41 0.00 43.01 5.54
2967 3749 0.179156 CATTTCATGTGCACTCCGCC 60.179 55.000 19.41 0.00 41.33 6.13
2968 3750 1.647545 ATTTCATGTGCACTCCGCCG 61.648 55.000 19.41 0.07 41.33 6.46
2993 3775 4.436998 CCGCTCGTCCTCCCACAC 62.437 72.222 0.00 0.00 0.00 3.82
2994 3776 4.436998 CGCTCGTCCTCCCACACC 62.437 72.222 0.00 0.00 0.00 4.16
2995 3777 4.436998 GCTCGTCCTCCCACACCG 62.437 72.222 0.00 0.00 0.00 4.94
2996 3778 2.989824 CTCGTCCTCCCACACCGT 60.990 66.667 0.00 0.00 0.00 4.83
2997 3779 2.987547 TCGTCCTCCCACACCGTC 60.988 66.667 0.00 0.00 0.00 4.79
2998 3780 3.299977 CGTCCTCCCACACCGTCA 61.300 66.667 0.00 0.00 0.00 4.35
2999 3781 2.342648 GTCCTCCCACACCGTCAC 59.657 66.667 0.00 0.00 0.00 3.67
3000 3782 2.920912 TCCTCCCACACCGTCACC 60.921 66.667 0.00 0.00 0.00 4.02
3001 3783 4.016706 CCTCCCACACCGTCACCC 62.017 72.222 0.00 0.00 0.00 4.61
3002 3784 4.016706 CTCCCACACCGTCACCCC 62.017 72.222 0.00 0.00 0.00 4.95
3042 3824 4.452733 CGCCCCGTCCAGTTCCTC 62.453 72.222 0.00 0.00 0.00 3.71
3043 3825 3.319198 GCCCCGTCCAGTTCCTCA 61.319 66.667 0.00 0.00 0.00 3.86
3044 3826 2.670148 GCCCCGTCCAGTTCCTCAT 61.670 63.158 0.00 0.00 0.00 2.90
3045 3827 1.522569 CCCCGTCCAGTTCCTCATC 59.477 63.158 0.00 0.00 0.00 2.92
3046 3828 1.141881 CCCGTCCAGTTCCTCATCG 59.858 63.158 0.00 0.00 0.00 3.84
3047 3829 1.141881 CCGTCCAGTTCCTCATCGG 59.858 63.158 0.00 0.00 0.00 4.18
3048 3830 1.605058 CCGTCCAGTTCCTCATCGGT 61.605 60.000 0.00 0.00 33.20 4.69
3049 3831 0.458543 CGTCCAGTTCCTCATCGGTG 60.459 60.000 0.00 0.00 0.00 4.94
3050 3832 0.895530 GTCCAGTTCCTCATCGGTGA 59.104 55.000 0.00 0.00 0.00 4.02
3051 3833 0.895530 TCCAGTTCCTCATCGGTGAC 59.104 55.000 0.00 0.00 0.00 3.67
3052 3834 0.108138 CCAGTTCCTCATCGGTGACC 60.108 60.000 0.00 0.00 0.00 4.02
3053 3835 0.898320 CAGTTCCTCATCGGTGACCT 59.102 55.000 0.00 0.00 0.00 3.85
3054 3836 1.134965 CAGTTCCTCATCGGTGACCTC 60.135 57.143 0.00 0.00 0.00 3.85
3055 3837 0.175989 GTTCCTCATCGGTGACCTCC 59.824 60.000 0.00 0.00 0.00 4.30
3056 3838 0.976073 TTCCTCATCGGTGACCTCCC 60.976 60.000 0.00 0.00 0.00 4.30
3057 3839 2.786495 CCTCATCGGTGACCTCCCG 61.786 68.421 0.00 0.00 46.83 5.14
3058 3840 3.432051 CTCATCGGTGACCTCCCGC 62.432 68.421 0.00 0.00 45.09 6.13
3059 3841 3.461773 CATCGGTGACCTCCCGCT 61.462 66.667 0.00 0.00 45.09 5.52
3060 3842 3.148279 ATCGGTGACCTCCCGCTC 61.148 66.667 0.00 0.00 45.09 5.03
3113 3895 4.796231 CCTCCACGCCGTCTTCCG 62.796 72.222 0.00 0.00 0.00 4.30
3117 3899 3.554692 CACGCCGTCTTCCGCATC 61.555 66.667 0.00 0.00 34.38 3.91
3118 3900 4.814294 ACGCCGTCTTCCGCATCC 62.814 66.667 0.00 0.00 34.38 3.51
3121 3903 4.891727 CCGTCTTCCGCATCCCCG 62.892 72.222 0.00 0.00 34.38 5.73
3131 3913 2.851102 CATCCCCGGCCTCCTCAT 60.851 66.667 0.00 0.00 0.00 2.90
3132 3914 2.527875 ATCCCCGGCCTCCTCATC 60.528 66.667 0.00 0.00 0.00 2.92
3139 3921 4.537433 GCCTCCTCATCGCCGCTT 62.537 66.667 0.00 0.00 0.00 4.68
3140 3922 2.279784 CCTCCTCATCGCCGCTTC 60.280 66.667 0.00 0.00 0.00 3.86
3141 3923 2.656651 CTCCTCATCGCCGCTTCG 60.657 66.667 0.00 0.00 0.00 3.79
3142 3924 4.873129 TCCTCATCGCCGCTTCGC 62.873 66.667 0.00 0.00 0.00 4.70
3186 3968 4.458666 CGGAGCTAGCCGTCTCTA 57.541 61.111 12.13 0.00 46.07 2.43
3187 3969 1.943293 CGGAGCTAGCCGTCTCTAC 59.057 63.158 12.13 0.00 46.07 2.59
3188 3970 1.508808 CGGAGCTAGCCGTCTCTACC 61.509 65.000 12.13 1.88 46.07 3.18
3189 3971 1.508808 GGAGCTAGCCGTCTCTACCG 61.509 65.000 12.13 0.00 0.00 4.02
3190 3972 2.120355 GAGCTAGCCGTCTCTACCGC 62.120 65.000 12.13 0.00 0.00 5.68
3191 3973 2.632541 CTAGCCGTCTCTACCGCG 59.367 66.667 0.00 0.00 35.33 6.46
3192 3974 3.524330 CTAGCCGTCTCTACCGCGC 62.524 68.421 0.00 0.00 35.33 6.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 2.764572 CACCTAACACCGTATCCTTCCT 59.235 50.000 0.00 0.00 0.00 3.36
82 83 0.529119 CCGCACCTAACACCGTATCC 60.529 60.000 0.00 0.00 0.00 2.59
184 185 2.225267 ACAGGGTTTGGTTGGGAATAGG 60.225 50.000 0.00 0.00 0.00 2.57
207 208 1.235281 GGTTTCAGAAGTGGTCGGCC 61.235 60.000 0.00 0.00 0.00 6.13
538 539 3.497584 CCTGAAGGAGCCCTTTGATATCC 60.498 52.174 7.76 0.00 44.82 2.59
568 569 0.597637 CAGCACTGACTTCCGTTCGT 60.598 55.000 0.00 0.00 0.00 3.85
705 706 5.803967 CGAAACTAAGTCATGGTGTAGGTAC 59.196 44.000 0.00 0.00 0.00 3.34
755 756 3.133721 GGAGGTGCAGAGCCCTATATATG 59.866 52.174 0.00 0.00 31.35 1.78
756 757 3.379452 GGAGGTGCAGAGCCCTATATAT 58.621 50.000 0.00 0.00 31.35 0.86
757 758 2.821437 GGAGGTGCAGAGCCCTATATA 58.179 52.381 0.00 0.00 31.35 0.86
758 759 1.650528 GGAGGTGCAGAGCCCTATAT 58.349 55.000 0.00 0.00 31.35 0.86
759 760 0.827925 CGGAGGTGCAGAGCCCTATA 60.828 60.000 0.00 0.00 31.35 1.31
760 761 2.136878 CGGAGGTGCAGAGCCCTAT 61.137 63.158 0.00 0.00 31.35 2.57
761 762 2.759973 CGGAGGTGCAGAGCCCTA 60.760 66.667 0.00 0.00 31.35 3.53
763 764 4.459089 GACGGAGGTGCAGAGCCC 62.459 72.222 0.00 0.00 0.00 5.19
764 765 4.459089 GGACGGAGGTGCAGAGCC 62.459 72.222 0.00 0.00 34.18 4.70
765 766 3.363844 GAGGACGGAGGTGCAGAGC 62.364 68.421 0.00 0.00 36.89 4.09
766 767 2.716017 GGAGGACGGAGGTGCAGAG 61.716 68.421 0.00 0.00 36.89 3.35
767 768 2.680352 GGAGGACGGAGGTGCAGA 60.680 66.667 0.00 0.00 36.89 4.26
768 769 4.135153 CGGAGGACGGAGGTGCAG 62.135 72.222 0.00 0.00 36.89 4.41
778 779 2.047179 GTTGGCTCCACGGAGGAC 60.047 66.667 14.86 0.00 43.07 3.85
779 780 1.899437 GATGTTGGCTCCACGGAGGA 61.899 60.000 14.86 0.00 46.75 3.71
780 781 1.450312 GATGTTGGCTCCACGGAGG 60.450 63.158 14.86 0.00 42.19 4.30
781 782 0.742281 CTGATGTTGGCTCCACGGAG 60.742 60.000 8.84 8.84 44.56 4.63
782 783 1.296392 CTGATGTTGGCTCCACGGA 59.704 57.895 0.00 0.00 0.00 4.69
783 784 2.401766 GCTGATGTTGGCTCCACGG 61.402 63.158 0.00 0.00 0.00 4.94
784 785 2.401766 GGCTGATGTTGGCTCCACG 61.402 63.158 0.00 0.00 0.00 4.94
785 786 1.303561 TGGCTGATGTTGGCTCCAC 60.304 57.895 0.00 0.00 0.00 4.02
786 787 1.303561 GTGGCTGATGTTGGCTCCA 60.304 57.895 0.00 0.00 0.00 3.86
787 788 1.303561 TGTGGCTGATGTTGGCTCC 60.304 57.895 0.00 0.00 0.00 4.70
788 789 1.589716 GGTGTGGCTGATGTTGGCTC 61.590 60.000 0.00 0.00 0.00 4.70
789 790 1.604593 GGTGTGGCTGATGTTGGCT 60.605 57.895 0.00 0.00 0.00 4.75
790 791 1.462731 TTGGTGTGGCTGATGTTGGC 61.463 55.000 0.00 0.00 0.00 4.52
791 792 0.599558 CTTGGTGTGGCTGATGTTGG 59.400 55.000 0.00 0.00 0.00 3.77
792 793 1.538512 CTCTTGGTGTGGCTGATGTTG 59.461 52.381 0.00 0.00 0.00 3.33
793 794 1.421268 TCTCTTGGTGTGGCTGATGTT 59.579 47.619 0.00 0.00 0.00 2.71
794 795 1.059098 TCTCTTGGTGTGGCTGATGT 58.941 50.000 0.00 0.00 0.00 3.06
795 796 1.446907 GTCTCTTGGTGTGGCTGATG 58.553 55.000 0.00 0.00 0.00 3.07
796 797 0.326264 GGTCTCTTGGTGTGGCTGAT 59.674 55.000 0.00 0.00 0.00 2.90
797 798 1.754745 GGTCTCTTGGTGTGGCTGA 59.245 57.895 0.00 0.00 0.00 4.26
798 799 1.669115 CGGTCTCTTGGTGTGGCTG 60.669 63.158 0.00 0.00 0.00 4.85
799 800 2.140792 ACGGTCTCTTGGTGTGGCT 61.141 57.895 0.00 0.00 0.00 4.75
800 801 1.961277 CACGGTCTCTTGGTGTGGC 60.961 63.158 0.00 0.00 0.00 5.01
801 802 1.301716 CCACGGTCTCTTGGTGTGG 60.302 63.158 0.00 0.00 43.55 4.17
802 803 1.961277 GCCACGGTCTCTTGGTGTG 60.961 63.158 0.00 0.00 35.03 3.82
803 804 2.426023 GCCACGGTCTCTTGGTGT 59.574 61.111 0.00 0.00 35.03 4.16
804 805 2.738521 CGCCACGGTCTCTTGGTG 60.739 66.667 0.00 0.00 36.65 4.17
805 806 2.803817 AACGCCACGGTCTCTTGGT 61.804 57.895 0.00 0.00 35.03 3.67
806 807 2.030562 AACGCCACGGTCTCTTGG 59.969 61.111 0.00 0.00 35.60 3.61
807 808 2.317609 CCAACGCCACGGTCTCTTG 61.318 63.158 0.00 0.00 0.00 3.02
808 809 2.030562 CCAACGCCACGGTCTCTT 59.969 61.111 0.00 0.00 0.00 2.85
809 810 3.231736 ACCAACGCCACGGTCTCT 61.232 61.111 0.00 0.00 0.00 3.10
810 811 3.041940 CACCAACGCCACGGTCTC 61.042 66.667 0.00 0.00 31.41 3.36
811 812 3.857038 ACACCAACGCCACGGTCT 61.857 61.111 0.00 0.00 31.41 3.85
812 813 3.645975 CACACCAACGCCACGGTC 61.646 66.667 0.00 0.00 31.41 4.79
818 819 3.835790 TACAGGCCACACCAACGCC 62.836 63.158 5.01 0.00 43.14 5.68
819 820 1.894756 TTACAGGCCACACCAACGC 60.895 57.895 5.01 0.00 43.14 4.84
820 821 0.816018 TGTTACAGGCCACACCAACG 60.816 55.000 5.01 0.00 43.14 4.10
821 822 1.616159 ATGTTACAGGCCACACCAAC 58.384 50.000 5.01 2.01 43.14 3.77
822 823 2.878117 GCTATGTTACAGGCCACACCAA 60.878 50.000 5.01 0.00 43.14 3.67
823 824 1.339631 GCTATGTTACAGGCCACACCA 60.340 52.381 5.01 0.00 43.14 4.17
824 825 1.379527 GCTATGTTACAGGCCACACC 58.620 55.000 5.01 0.00 39.61 4.16
825 826 1.379527 GGCTATGTTACAGGCCACAC 58.620 55.000 21.13 0.00 43.59 3.82
826 827 0.107897 CGGCTATGTTACAGGCCACA 60.108 55.000 23.90 0.00 44.27 4.17
827 828 0.814010 CCGGCTATGTTACAGGCCAC 60.814 60.000 23.90 0.00 44.27 5.01
828 829 1.524961 CCGGCTATGTTACAGGCCA 59.475 57.895 23.90 0.00 44.27 5.36
829 830 1.892391 GCCGGCTATGTTACAGGCC 60.892 63.158 22.15 17.78 38.72 5.19
830 831 1.153249 TGCCGGCTATGTTACAGGC 60.153 57.895 29.70 5.73 44.38 4.85
831 832 0.107897 TGTGCCGGCTATGTTACAGG 60.108 55.000 29.70 0.00 0.00 4.00
832 833 1.665679 CTTGTGCCGGCTATGTTACAG 59.334 52.381 29.70 11.82 0.00 2.74
833 834 1.677518 CCTTGTGCCGGCTATGTTACA 60.678 52.381 29.70 19.55 0.00 2.41
834 835 1.014352 CCTTGTGCCGGCTATGTTAC 58.986 55.000 29.70 16.88 0.00 2.50
835 836 0.107410 CCCTTGTGCCGGCTATGTTA 60.107 55.000 29.70 1.94 0.00 2.41
836 837 1.378514 CCCTTGTGCCGGCTATGTT 60.379 57.895 29.70 0.00 0.00 2.71
837 838 2.257409 CTCCCTTGTGCCGGCTATGT 62.257 60.000 29.70 0.00 0.00 2.29
838 839 1.524621 CTCCCTTGTGCCGGCTATG 60.525 63.158 29.70 17.56 0.00 2.23
839 840 1.271840 TTCTCCCTTGTGCCGGCTAT 61.272 55.000 29.70 0.00 0.00 2.97
840 841 1.916273 TTCTCCCTTGTGCCGGCTA 60.916 57.895 29.70 14.39 0.00 3.93
841 842 3.249189 TTCTCCCTTGTGCCGGCT 61.249 61.111 29.70 0.00 0.00 5.52
842 843 3.056328 GTTCTCCCTTGTGCCGGC 61.056 66.667 22.73 22.73 0.00 6.13
843 844 1.550130 TAGGTTCTCCCTTGTGCCGG 61.550 60.000 0.00 0.00 42.73 6.13
844 845 0.391263 GTAGGTTCTCCCTTGTGCCG 60.391 60.000 0.00 0.00 42.73 5.69
845 846 0.984995 AGTAGGTTCTCCCTTGTGCC 59.015 55.000 0.00 0.00 42.73 5.01
846 847 1.623811 TGAGTAGGTTCTCCCTTGTGC 59.376 52.381 0.00 0.00 42.73 4.57
847 848 4.351874 TTTGAGTAGGTTCTCCCTTGTG 57.648 45.455 0.00 0.00 42.73 3.33
848 849 4.597507 TGATTTGAGTAGGTTCTCCCTTGT 59.402 41.667 0.00 0.00 42.73 3.16
849 850 5.165961 TGATTTGAGTAGGTTCTCCCTTG 57.834 43.478 0.00 0.00 42.73 3.61
850 851 4.323868 GCTGATTTGAGTAGGTTCTCCCTT 60.324 45.833 0.00 0.00 42.73 3.95
852 853 3.536570 GCTGATTTGAGTAGGTTCTCCC 58.463 50.000 0.00 0.00 33.93 4.30
853 854 3.198853 AGGCTGATTTGAGTAGGTTCTCC 59.801 47.826 0.00 0.00 33.93 3.71
854 855 4.438148 GAGGCTGATTTGAGTAGGTTCTC 58.562 47.826 0.00 0.00 35.28 2.87
855 856 3.198853 GGAGGCTGATTTGAGTAGGTTCT 59.801 47.826 0.00 0.00 0.00 3.01
856 857 3.536570 GGAGGCTGATTTGAGTAGGTTC 58.463 50.000 0.00 0.00 0.00 3.62
857 858 2.093447 CGGAGGCTGATTTGAGTAGGTT 60.093 50.000 0.00 0.00 0.00 3.50
858 859 1.482593 CGGAGGCTGATTTGAGTAGGT 59.517 52.381 0.00 0.00 0.00 3.08
859 860 1.808133 GCGGAGGCTGATTTGAGTAGG 60.808 57.143 0.00 0.00 35.83 3.18
860 861 1.576356 GCGGAGGCTGATTTGAGTAG 58.424 55.000 0.00 0.00 35.83 2.57
861 862 3.760693 GCGGAGGCTGATTTGAGTA 57.239 52.632 0.00 0.00 35.83 2.59
862 863 4.625800 GCGGAGGCTGATTTGAGT 57.374 55.556 0.00 0.00 35.83 3.41
874 875 2.876368 AATTTCTGGAGCGGGCGGAG 62.876 60.000 0.00 0.00 0.00 4.63
875 876 2.478335 AAATTTCTGGAGCGGGCGGA 62.478 55.000 0.00 0.00 0.00 5.54
876 877 2.046285 AAATTTCTGGAGCGGGCGG 61.046 57.895 0.00 0.00 0.00 6.13
877 878 1.137404 CAAATTTCTGGAGCGGGCG 59.863 57.895 0.00 0.00 0.00 6.13
878 879 0.171231 GTCAAATTTCTGGAGCGGGC 59.829 55.000 0.00 0.00 0.00 6.13
879 880 0.811281 GGTCAAATTTCTGGAGCGGG 59.189 55.000 0.00 0.00 0.00 6.13
880 881 0.811281 GGGTCAAATTTCTGGAGCGG 59.189 55.000 0.00 0.00 0.00 5.52
881 882 0.811281 GGGGTCAAATTTCTGGAGCG 59.189 55.000 0.00 0.00 0.00 5.03
882 883 1.821136 CAGGGGTCAAATTTCTGGAGC 59.179 52.381 0.00 0.00 0.00 4.70
883 884 1.821136 GCAGGGGTCAAATTTCTGGAG 59.179 52.381 6.11 0.00 0.00 3.86
884 885 1.886222 CGCAGGGGTCAAATTTCTGGA 60.886 52.381 6.11 0.00 0.00 3.86
885 886 0.527565 CGCAGGGGTCAAATTTCTGG 59.472 55.000 6.11 0.00 0.00 3.86
886 887 1.533625 TCGCAGGGGTCAAATTTCTG 58.466 50.000 0.00 0.00 0.00 3.02
889 890 2.493278 CTCATTCGCAGGGGTCAAATTT 59.507 45.455 0.00 0.00 0.00 1.82
908 909 4.385358 TTTTCCACTTTGTTCAAGGCTC 57.615 40.909 0.00 0.00 36.72 4.70
928 929 1.402720 CGCACCCTGATCGCAATTTTT 60.403 47.619 0.00 0.00 0.00 1.94
930 931 0.676466 TCGCACCCTGATCGCAATTT 60.676 50.000 0.00 0.00 0.00 1.82
931 932 0.464373 ATCGCACCCTGATCGCAATT 60.464 50.000 0.00 0.00 0.00 2.32
932 933 0.882042 GATCGCACCCTGATCGCAAT 60.882 55.000 0.00 0.00 33.55 3.56
956 957 4.826733 CACCATGTATTTATAGGCAGCCAA 59.173 41.667 15.80 0.00 0.00 4.52
957 958 4.103943 TCACCATGTATTTATAGGCAGCCA 59.896 41.667 15.80 0.00 0.00 4.75
1025 1027 6.319152 CGTAGGTAGAGGAAGAAGAGAATGAA 59.681 42.308 0.00 0.00 0.00 2.57
1046 1048 3.442625 TCCTATATGATTGGTCCGCGTAG 59.557 47.826 4.92 0.00 0.00 3.51
1055 1057 6.378564 AGTGGACGATACTCCTATATGATTGG 59.621 42.308 0.00 0.00 0.00 3.16
1061 1063 3.690139 CGCAGTGGACGATACTCCTATAT 59.310 47.826 0.00 0.00 0.00 0.86
1066 1068 1.807886 ACGCAGTGGACGATACTCC 59.192 57.895 0.00 0.00 42.51 3.85
1084 1086 1.806542 GAAGAACGAAGAAGCCATGCA 59.193 47.619 0.00 0.00 0.00 3.96
1098 1100 0.232303 CCACACAAGCGACGAAGAAC 59.768 55.000 0.00 0.00 0.00 3.01
1138 1140 2.186903 GCGCGAATGGAGGAGGAA 59.813 61.111 12.10 0.00 0.00 3.36
1195 1197 2.514824 GGCGCCTTGGTGGAGATC 60.515 66.667 22.15 0.00 37.90 2.75
1218 1220 1.250328 CGACCATATACCTACCGCCA 58.750 55.000 0.00 0.00 0.00 5.69
1220 1222 0.599558 TGCGACCATATACCTACCGC 59.400 55.000 0.00 0.00 41.28 5.68
1243 1245 1.809684 ATGGAGATCTGCATGCATCG 58.190 50.000 26.87 11.02 40.21 3.84
1256 1259 2.487805 GCATGCACCCTTATCATGGAGA 60.488 50.000 14.21 0.00 38.33 3.71
1278 1282 1.135083 GCTGTACACACGTCCTAGCAT 60.135 52.381 0.00 0.00 0.00 3.79
1292 1296 5.060569 CAGTACACGTGAATAACTGCTGTAC 59.939 44.000 25.01 9.37 35.01 2.90
1310 1328 1.081442 CTCTGCACGCGTCAGTACA 60.081 57.895 26.56 13.99 33.48 2.90
1365 1384 2.125106 GAACGGCGGCTTCTCCAT 60.125 61.111 13.24 0.00 34.01 3.41
1439 1458 4.015764 TGCATTTAACCTGATAGCAAGCA 58.984 39.130 0.00 0.00 0.00 3.91
1553 1572 1.172180 CCTTGCCGCTGAGGTTGAAA 61.172 55.000 0.00 0.00 43.70 2.69
1664 1683 2.668212 GGTGTGTGCGCCAGCTAA 60.668 61.111 4.18 0.00 44.43 3.09
1719 1748 3.917988 TGATCGATGGATGCACAGTATC 58.082 45.455 0.54 0.00 31.51 2.24
1721 1750 4.341366 AATGATCGATGGATGCACAGTA 57.659 40.909 0.54 0.00 31.51 2.74
1722 1751 2.924757 ATGATCGATGGATGCACAGT 57.075 45.000 0.54 0.00 31.51 3.55
1723 1752 3.314357 ACAAATGATCGATGGATGCACAG 59.686 43.478 0.54 0.00 31.51 3.66
1725 1754 3.313249 TGACAAATGATCGATGGATGCAC 59.687 43.478 0.54 0.00 31.51 4.57
1726 1755 3.543665 TGACAAATGATCGATGGATGCA 58.456 40.909 0.54 0.00 31.51 3.96
1727 1756 4.023450 ACATGACAAATGATCGATGGATGC 60.023 41.667 0.54 0.00 31.51 3.91
1728 1757 5.469084 AGACATGACAAATGATCGATGGATG 59.531 40.000 0.54 0.00 31.51 3.51
1749 2109 0.727398 CGGCGGAGGAAATCAAAGAC 59.273 55.000 0.00 0.00 0.00 3.01
1975 2396 2.125106 GGATCGATATGGGCGCCC 60.125 66.667 39.40 39.40 0.00 6.13
2072 2493 5.165911 TCGATCAGTAGTTTACGATGGAC 57.834 43.478 0.00 0.00 29.48 4.02
2112 2538 6.873997 TGTGAATTAACACATACTCGATCCT 58.126 36.000 0.00 0.00 44.29 3.24
2132 2558 0.250793 ACGGCCGGAATACAATGTGA 59.749 50.000 31.76 0.00 0.00 3.58
2133 2559 0.376852 CACGGCCGGAATACAATGTG 59.623 55.000 31.76 10.60 0.00 3.21
2134 2560 0.035820 ACACGGCCGGAATACAATGT 60.036 50.000 31.76 18.92 0.00 2.71
2135 2561 1.595794 GTACACGGCCGGAATACAATG 59.404 52.381 31.76 18.20 0.00 2.82
2136 2562 1.473788 GGTACACGGCCGGAATACAAT 60.474 52.381 31.76 1.49 0.00 2.71
2137 2563 0.108233 GGTACACGGCCGGAATACAA 60.108 55.000 31.76 4.16 0.00 2.41
2138 2564 0.971959 AGGTACACGGCCGGAATACA 60.972 55.000 31.76 4.97 0.00 2.29
2139 2565 0.176449 AAGGTACACGGCCGGAATAC 59.824 55.000 31.76 25.33 0.00 1.89
2140 2566 0.176219 CAAGGTACACGGCCGGAATA 59.824 55.000 31.76 15.60 0.00 1.75
2141 2567 1.078708 CAAGGTACACGGCCGGAAT 60.079 57.895 31.76 16.74 0.00 3.01
2142 2568 2.344500 CAAGGTACACGGCCGGAA 59.656 61.111 31.76 11.56 0.00 4.30
2143 2569 2.918802 ACAAGGTACACGGCCGGA 60.919 61.111 31.76 11.78 0.00 5.14
2180 2606 3.334583 ACAGGCTTTCATCTCGCTTTA 57.665 42.857 0.00 0.00 0.00 1.85
2181 2607 2.191128 ACAGGCTTTCATCTCGCTTT 57.809 45.000 0.00 0.00 0.00 3.51
2182 2608 2.191128 AACAGGCTTTCATCTCGCTT 57.809 45.000 0.00 0.00 0.00 4.68
2187 2613 4.147321 ACACATGAAACAGGCTTTCATCT 58.853 39.130 10.70 0.00 44.60 2.90
2188 2614 4.510038 ACACATGAAACAGGCTTTCATC 57.490 40.909 10.70 0.00 44.60 2.92
2296 3066 6.733145 GCCAAATATTTCAGGCAAACAAAAA 58.267 32.000 19.61 0.00 46.26 1.94
2297 3067 6.311055 GCCAAATATTTCAGGCAAACAAAA 57.689 33.333 19.61 0.00 46.26 2.44
2373 3146 6.094881 ACTCGAAGGATTGAAGAACAACAAAA 59.905 34.615 0.00 0.00 41.52 2.44
2375 3148 5.123227 ACTCGAAGGATTGAAGAACAACAA 58.877 37.500 0.00 0.00 41.52 2.83
2376 3149 4.703897 ACTCGAAGGATTGAAGAACAACA 58.296 39.130 0.00 0.00 41.52 3.33
2694 3476 3.090532 CCCTAGTCCCCTGTGCCC 61.091 72.222 0.00 0.00 0.00 5.36
2701 3483 1.328430 CGTTCACTCCCCTAGTCCCC 61.328 65.000 0.00 0.00 35.76 4.81
2706 3488 0.033405 TCCTCCGTTCACTCCCCTAG 60.033 60.000 0.00 0.00 0.00 3.02
2707 3489 0.324091 GTCCTCCGTTCACTCCCCTA 60.324 60.000 0.00 0.00 0.00 3.53
2708 3490 1.609794 GTCCTCCGTTCACTCCCCT 60.610 63.158 0.00 0.00 0.00 4.79
2709 3491 2.979649 GTCCTCCGTTCACTCCCC 59.020 66.667 0.00 0.00 0.00 4.81
2710 3492 1.935327 CTCGTCCTCCGTTCACTCCC 61.935 65.000 0.00 0.00 37.94 4.30
2711 3493 1.242665 ACTCGTCCTCCGTTCACTCC 61.243 60.000 0.00 0.00 37.94 3.85
2712 3494 1.446907 TACTCGTCCTCCGTTCACTC 58.553 55.000 0.00 0.00 37.94 3.51
2713 3495 2.125773 ATACTCGTCCTCCGTTCACT 57.874 50.000 0.00 0.00 37.94 3.41
2714 3496 2.935481 AATACTCGTCCTCCGTTCAC 57.065 50.000 0.00 0.00 37.94 3.18
2715 3497 4.218200 TGTTAAATACTCGTCCTCCGTTCA 59.782 41.667 0.00 0.00 37.94 3.18
2716 3498 4.737054 TGTTAAATACTCGTCCTCCGTTC 58.263 43.478 0.00 0.00 37.94 3.95
2717 3499 4.789012 TGTTAAATACTCGTCCTCCGTT 57.211 40.909 0.00 0.00 37.94 4.44
2718 3500 4.789012 TTGTTAAATACTCGTCCTCCGT 57.211 40.909 0.00 0.00 37.94 4.69
2719 3501 6.470557 TTTTTGTTAAATACTCGTCCTCCG 57.529 37.500 0.00 0.00 38.13 4.63
2740 3522 6.699642 CGGTTTCATGAAATGTGGTAGTTTTT 59.300 34.615 23.05 0.00 46.80 1.94
2741 3523 6.183360 ACGGTTTCATGAAATGTGGTAGTTTT 60.183 34.615 23.05 0.00 46.80 2.43
2742 3524 5.300792 ACGGTTTCATGAAATGTGGTAGTTT 59.699 36.000 23.05 0.00 46.80 2.66
2743 3525 4.825085 ACGGTTTCATGAAATGTGGTAGTT 59.175 37.500 23.05 0.48 46.80 2.24
2744 3526 4.394729 ACGGTTTCATGAAATGTGGTAGT 58.605 39.130 23.05 12.37 46.80 2.73
2745 3527 5.163794 GGTACGGTTTCATGAAATGTGGTAG 60.164 44.000 26.54 15.60 46.80 3.18
2746 3528 4.696402 GGTACGGTTTCATGAAATGTGGTA 59.304 41.667 26.54 20.37 46.80 3.25
2747 3529 3.504520 GGTACGGTTTCATGAAATGTGGT 59.495 43.478 26.54 21.08 46.80 4.16
2748 3530 3.756434 AGGTACGGTTTCATGAAATGTGG 59.244 43.478 26.54 17.86 46.80 4.17
2749 3531 5.410132 TGTAGGTACGGTTTCATGAAATGTG 59.590 40.000 26.54 20.05 46.80 3.21
2750 3532 5.553123 TGTAGGTACGGTTTCATGAAATGT 58.447 37.500 23.05 23.50 46.80 2.71
2752 3534 6.713450 AGTTTGTAGGTACGGTTTCATGAAAT 59.287 34.615 23.05 10.68 32.36 2.17
2753 3535 6.056884 AGTTTGTAGGTACGGTTTCATGAAA 58.943 36.000 16.91 16.91 0.00 2.69
2754 3536 5.613329 AGTTTGTAGGTACGGTTTCATGAA 58.387 37.500 3.38 3.38 0.00 2.57
2755 3537 5.217978 AGTTTGTAGGTACGGTTTCATGA 57.782 39.130 0.00 0.00 0.00 3.07
2756 3538 6.814644 TGATAGTTTGTAGGTACGGTTTCATG 59.185 38.462 0.00 0.00 0.00 3.07
2757 3539 6.815142 GTGATAGTTTGTAGGTACGGTTTCAT 59.185 38.462 0.00 0.00 0.00 2.57
2758 3540 6.015180 AGTGATAGTTTGTAGGTACGGTTTCA 60.015 38.462 0.00 0.00 0.00 2.69
2759 3541 6.393171 AGTGATAGTTTGTAGGTACGGTTTC 58.607 40.000 0.00 0.00 0.00 2.78
2760 3542 6.210185 AGAGTGATAGTTTGTAGGTACGGTTT 59.790 38.462 0.00 0.00 0.00 3.27
2761 3543 5.713861 AGAGTGATAGTTTGTAGGTACGGTT 59.286 40.000 0.00 0.00 0.00 4.44
2762 3544 5.259632 AGAGTGATAGTTTGTAGGTACGGT 58.740 41.667 0.00 0.00 0.00 4.83
2763 3545 5.831702 AGAGTGATAGTTTGTAGGTACGG 57.168 43.478 0.00 0.00 0.00 4.02
2821 3603 8.883731 CCGACATGATAGTTTTTAGTCAAAGAT 58.116 33.333 0.00 0.00 0.00 2.40
2822 3604 8.092068 TCCGACATGATAGTTTTTAGTCAAAGA 58.908 33.333 0.00 0.00 0.00 2.52
2823 3605 8.251750 TCCGACATGATAGTTTTTAGTCAAAG 57.748 34.615 0.00 0.00 0.00 2.77
2824 3606 8.610248 TTCCGACATGATAGTTTTTAGTCAAA 57.390 30.769 0.00 0.00 0.00 2.69
2825 3607 8.610248 TTTCCGACATGATAGTTTTTAGTCAA 57.390 30.769 0.00 0.00 0.00 3.18
2826 3608 8.610248 TTTTCCGACATGATAGTTTTTAGTCA 57.390 30.769 0.00 0.00 0.00 3.41
2827 3609 8.718734 ACTTTTCCGACATGATAGTTTTTAGTC 58.281 33.333 0.00 0.00 0.00 2.59
2828 3610 8.504005 CACTTTTCCGACATGATAGTTTTTAGT 58.496 33.333 0.00 0.00 0.00 2.24
2829 3611 7.481798 GCACTTTTCCGACATGATAGTTTTTAG 59.518 37.037 0.00 0.00 0.00 1.85
2830 3612 7.302524 GCACTTTTCCGACATGATAGTTTTTA 58.697 34.615 0.00 0.00 0.00 1.52
2831 3613 6.149633 GCACTTTTCCGACATGATAGTTTTT 58.850 36.000 0.00 0.00 0.00 1.94
2832 3614 5.335661 GGCACTTTTCCGACATGATAGTTTT 60.336 40.000 0.00 0.00 0.00 2.43
2833 3615 4.156008 GGCACTTTTCCGACATGATAGTTT 59.844 41.667 0.00 0.00 0.00 2.66
2834 3616 3.689649 GGCACTTTTCCGACATGATAGTT 59.310 43.478 0.00 0.00 0.00 2.24
2835 3617 3.270877 GGCACTTTTCCGACATGATAGT 58.729 45.455 0.00 0.00 0.00 2.12
2836 3618 2.614057 GGGCACTTTTCCGACATGATAG 59.386 50.000 0.00 0.00 0.00 2.08
2837 3619 2.026729 TGGGCACTTTTCCGACATGATA 60.027 45.455 0.00 0.00 0.00 2.15
2838 3620 1.271871 TGGGCACTTTTCCGACATGAT 60.272 47.619 0.00 0.00 0.00 2.45
2839 3621 0.109532 TGGGCACTTTTCCGACATGA 59.890 50.000 0.00 0.00 0.00 3.07
2840 3622 0.958091 TTGGGCACTTTTCCGACATG 59.042 50.000 0.00 0.00 0.00 3.21
2841 3623 1.923356 ATTGGGCACTTTTCCGACAT 58.077 45.000 0.00 0.00 0.00 3.06
2842 3624 1.611491 GAATTGGGCACTTTTCCGACA 59.389 47.619 0.00 0.00 0.00 4.35
2843 3625 1.401018 CGAATTGGGCACTTTTCCGAC 60.401 52.381 0.00 0.00 0.00 4.79
2844 3626 0.878416 CGAATTGGGCACTTTTCCGA 59.122 50.000 0.00 0.00 0.00 4.55
2845 3627 0.732538 GCGAATTGGGCACTTTTCCG 60.733 55.000 0.00 0.00 0.00 4.30
2846 3628 0.389817 GGCGAATTGGGCACTTTTCC 60.390 55.000 9.20 0.00 0.00 3.13
2847 3629 0.603065 AGGCGAATTGGGCACTTTTC 59.397 50.000 16.18 0.00 34.40 2.29
2848 3630 0.603065 GAGGCGAATTGGGCACTTTT 59.397 50.000 16.18 0.00 34.40 2.27
2849 3631 0.251341 AGAGGCGAATTGGGCACTTT 60.251 50.000 16.18 0.00 29.48 2.66
2850 3632 0.251341 AAGAGGCGAATTGGGCACTT 60.251 50.000 17.74 17.74 38.27 3.16
2851 3633 0.678048 GAAGAGGCGAATTGGGCACT 60.678 55.000 16.18 12.05 35.03 4.40
2852 3634 0.678048 AGAAGAGGCGAATTGGGCAC 60.678 55.000 16.18 9.88 34.40 5.01
2853 3635 0.908910 TAGAAGAGGCGAATTGGGCA 59.091 50.000 16.18 0.00 34.40 5.36
2854 3636 2.038387 TTAGAAGAGGCGAATTGGGC 57.962 50.000 5.85 5.85 0.00 5.36
2855 3637 2.351726 CGTTTAGAAGAGGCGAATTGGG 59.648 50.000 0.00 0.00 0.00 4.12
2856 3638 2.223044 GCGTTTAGAAGAGGCGAATTGG 60.223 50.000 0.00 0.00 0.00 3.16
2857 3639 2.223044 GGCGTTTAGAAGAGGCGAATTG 60.223 50.000 0.00 0.00 0.00 2.32
2858 3640 2.007608 GGCGTTTAGAAGAGGCGAATT 58.992 47.619 0.00 0.00 0.00 2.17
2859 3641 1.207329 AGGCGTTTAGAAGAGGCGAAT 59.793 47.619 0.00 0.00 0.00 3.34
2860 3642 0.606604 AGGCGTTTAGAAGAGGCGAA 59.393 50.000 0.00 0.00 0.00 4.70
2861 3643 0.606604 AAGGCGTTTAGAAGAGGCGA 59.393 50.000 0.00 0.00 0.00 5.54
2862 3644 1.393883 GAAAGGCGTTTAGAAGAGGCG 59.606 52.381 4.03 0.00 0.00 5.52
2863 3645 2.416893 CAGAAAGGCGTTTAGAAGAGGC 59.583 50.000 4.03 0.00 0.00 4.70
2864 3646 3.680458 GTCAGAAAGGCGTTTAGAAGAGG 59.320 47.826 4.03 0.00 0.00 3.69
2865 3647 4.307432 TGTCAGAAAGGCGTTTAGAAGAG 58.693 43.478 4.03 0.00 0.00 2.85
2866 3648 4.307432 CTGTCAGAAAGGCGTTTAGAAGA 58.693 43.478 4.03 0.00 0.00 2.87
2867 3649 3.433615 CCTGTCAGAAAGGCGTTTAGAAG 59.566 47.826 4.03 6.67 0.00 2.85
2868 3650 3.070446 TCCTGTCAGAAAGGCGTTTAGAA 59.930 43.478 4.03 0.00 34.56 2.10
2869 3651 2.631062 TCCTGTCAGAAAGGCGTTTAGA 59.369 45.455 4.03 3.57 34.56 2.10
2870 3652 3.040147 TCCTGTCAGAAAGGCGTTTAG 57.960 47.619 4.03 1.14 34.56 1.85
2871 3653 3.334691 CATCCTGTCAGAAAGGCGTTTA 58.665 45.455 4.03 0.00 34.56 2.01
2872 3654 2.154462 CATCCTGTCAGAAAGGCGTTT 58.846 47.619 3.62 3.62 34.56 3.60
2873 3655 1.611673 CCATCCTGTCAGAAAGGCGTT 60.612 52.381 0.87 0.00 34.56 4.84
2874 3656 0.036010 CCATCCTGTCAGAAAGGCGT 60.036 55.000 0.87 0.00 34.56 5.68
2875 3657 0.745845 CCCATCCTGTCAGAAAGGCG 60.746 60.000 0.87 0.00 34.56 5.52
2876 3658 1.034292 GCCCATCCTGTCAGAAAGGC 61.034 60.000 0.87 4.51 34.56 4.35
2877 3659 0.394899 GGCCCATCCTGTCAGAAAGG 60.395 60.000 0.00 0.00 36.02 3.11
2878 3660 0.394899 GGGCCCATCCTGTCAGAAAG 60.395 60.000 19.95 0.00 34.39 2.62
2879 3661 1.139498 TGGGCCCATCCTGTCAGAAA 61.139 55.000 24.45 0.00 34.39 2.52
2880 3662 1.541118 TGGGCCCATCCTGTCAGAA 60.541 57.895 24.45 0.00 34.39 3.02
2881 3663 2.124768 TGGGCCCATCCTGTCAGA 59.875 61.111 24.45 0.00 34.39 3.27
2882 3664 2.273449 GTGGGCCCATCCTGTCAG 59.727 66.667 31.45 0.00 34.39 3.51
2883 3665 3.338250 GGTGGGCCCATCCTGTCA 61.338 66.667 31.45 0.00 34.39 3.58
2884 3666 3.017581 AGGTGGGCCCATCCTGTC 61.018 66.667 32.90 19.43 34.66 3.51
2885 3667 3.341629 CAGGTGGGCCCATCCTGT 61.342 66.667 39.15 22.61 38.83 4.00
2886 3668 3.341629 ACAGGTGGGCCCATCCTG 61.342 66.667 42.16 42.16 43.83 3.86
2887 3669 3.017581 GACAGGTGGGCCCATCCT 61.018 66.667 32.31 30.90 34.66 3.24
2888 3670 3.338250 TGACAGGTGGGCCCATCC 61.338 66.667 32.31 29.28 34.66 3.51
2889 3671 1.271840 TACTGACAGGTGGGCCCATC 61.272 60.000 31.45 30.25 34.66 3.51
2890 3672 0.624500 ATACTGACAGGTGGGCCCAT 60.625 55.000 31.45 12.72 34.66 4.00
2891 3673 0.844661 AATACTGACAGGTGGGCCCA 60.845 55.000 24.45 24.45 34.66 5.36
2892 3674 1.209621 TAATACTGACAGGTGGGCCC 58.790 55.000 17.59 17.59 34.57 5.80
2893 3675 3.136626 AGATTAATACTGACAGGTGGGCC 59.863 47.826 7.51 0.00 0.00 5.80
2894 3676 4.423625 AGATTAATACTGACAGGTGGGC 57.576 45.455 7.51 0.00 0.00 5.36
2895 3677 6.240549 AGAAGATTAATACTGACAGGTGGG 57.759 41.667 7.51 0.00 0.00 4.61
2896 3678 6.763610 GGAAGAAGATTAATACTGACAGGTGG 59.236 42.308 7.51 0.00 0.00 4.61
2897 3679 7.560368 AGGAAGAAGATTAATACTGACAGGTG 58.440 38.462 7.51 0.00 0.00 4.00
2898 3680 7.147637 GGAGGAAGAAGATTAATACTGACAGGT 60.148 40.741 7.51 0.00 0.00 4.00
2899 3681 7.070571 AGGAGGAAGAAGATTAATACTGACAGG 59.929 40.741 7.51 0.00 0.00 4.00
2900 3682 8.017418 AGGAGGAAGAAGATTAATACTGACAG 57.983 38.462 0.00 0.00 0.00 3.51
2901 3683 7.841729 AGAGGAGGAAGAAGATTAATACTGACA 59.158 37.037 0.00 0.00 0.00 3.58
2902 3684 8.245195 AGAGGAGGAAGAAGATTAATACTGAC 57.755 38.462 0.00 0.00 0.00 3.51
2903 3685 8.285891 AGAGAGGAGGAAGAAGATTAATACTGA 58.714 37.037 0.00 0.00 0.00 3.41
2904 3686 8.477419 AGAGAGGAGGAAGAAGATTAATACTG 57.523 38.462 0.00 0.00 0.00 2.74
2905 3687 9.500701 AAAGAGAGGAGGAAGAAGATTAATACT 57.499 33.333 0.00 0.00 0.00 2.12
2906 3688 9.758651 GAAAGAGAGGAGGAAGAAGATTAATAC 57.241 37.037 0.00 0.00 0.00 1.89
2907 3689 9.722317 AGAAAGAGAGGAGGAAGAAGATTAATA 57.278 33.333 0.00 0.00 0.00 0.98
2908 3690 8.485392 CAGAAAGAGAGGAGGAAGAAGATTAAT 58.515 37.037 0.00 0.00 0.00 1.40
2909 3691 7.093112 CCAGAAAGAGAGGAGGAAGAAGATTAA 60.093 40.741 0.00 0.00 0.00 1.40
2910 3692 6.382570 CCAGAAAGAGAGGAGGAAGAAGATTA 59.617 42.308 0.00 0.00 0.00 1.75
2911 3693 5.189539 CCAGAAAGAGAGGAGGAAGAAGATT 59.810 44.000 0.00 0.00 0.00 2.40
2912 3694 4.716287 CCAGAAAGAGAGGAGGAAGAAGAT 59.284 45.833 0.00 0.00 0.00 2.40
2913 3695 4.093011 CCAGAAAGAGAGGAGGAAGAAGA 58.907 47.826 0.00 0.00 0.00 2.87
2914 3696 3.369366 GCCAGAAAGAGAGGAGGAAGAAG 60.369 52.174 0.00 0.00 0.00 2.85
2915 3697 2.569404 GCCAGAAAGAGAGGAGGAAGAA 59.431 50.000 0.00 0.00 0.00 2.52
2916 3698 2.183679 GCCAGAAAGAGAGGAGGAAGA 58.816 52.381 0.00 0.00 0.00 2.87
2917 3699 1.905215 TGCCAGAAAGAGAGGAGGAAG 59.095 52.381 0.00 0.00 0.00 3.46
2918 3700 2.030027 TGCCAGAAAGAGAGGAGGAA 57.970 50.000 0.00 0.00 0.00 3.36
2919 3701 2.260639 ATGCCAGAAAGAGAGGAGGA 57.739 50.000 0.00 0.00 0.00 3.71
2920 3702 3.277715 GAAATGCCAGAAAGAGAGGAGG 58.722 50.000 0.00 0.00 0.00 4.30
2921 3703 3.054508 AGGAAATGCCAGAAAGAGAGGAG 60.055 47.826 0.00 0.00 40.02 3.69
2922 3704 2.915604 AGGAAATGCCAGAAAGAGAGGA 59.084 45.455 0.00 0.00 40.02 3.71
2923 3705 3.277715 GAGGAAATGCCAGAAAGAGAGG 58.722 50.000 0.00 0.00 40.02 3.69
2924 3706 3.947868 TGAGGAAATGCCAGAAAGAGAG 58.052 45.455 0.00 0.00 40.02 3.20
2925 3707 4.371624 TTGAGGAAATGCCAGAAAGAGA 57.628 40.909 0.00 0.00 40.02 3.10
2926 3708 4.279169 TGTTTGAGGAAATGCCAGAAAGAG 59.721 41.667 0.00 0.00 40.02 2.85
2927 3709 4.214310 TGTTTGAGGAAATGCCAGAAAGA 58.786 39.130 0.00 0.00 40.02 2.52
2928 3710 4.589216 TGTTTGAGGAAATGCCAGAAAG 57.411 40.909 0.00 0.00 40.02 2.62
2929 3711 5.549742 AATGTTTGAGGAAATGCCAGAAA 57.450 34.783 0.00 0.00 40.02 2.52
2930 3712 5.070180 TGAAATGTTTGAGGAAATGCCAGAA 59.930 36.000 0.00 0.00 40.02 3.02
2931 3713 4.588106 TGAAATGTTTGAGGAAATGCCAGA 59.412 37.500 0.00 0.00 40.02 3.86
2932 3714 4.885413 TGAAATGTTTGAGGAAATGCCAG 58.115 39.130 0.00 0.00 40.02 4.85
2933 3715 4.952071 TGAAATGTTTGAGGAAATGCCA 57.048 36.364 0.00 0.00 40.02 4.92
2934 3716 5.789710 CATGAAATGTTTGAGGAAATGCC 57.210 39.130 0.00 0.00 40.20 4.40
2976 3758 4.436998 GTGTGGGAGGACGAGCGG 62.437 72.222 0.00 0.00 0.00 5.52
2977 3759 4.436998 GGTGTGGGAGGACGAGCG 62.437 72.222 0.00 0.00 0.00 5.03
2978 3760 4.436998 CGGTGTGGGAGGACGAGC 62.437 72.222 0.00 0.00 0.00 5.03
2979 3761 2.989824 ACGGTGTGGGAGGACGAG 60.990 66.667 0.00 0.00 0.00 4.18
2980 3762 2.987547 GACGGTGTGGGAGGACGA 60.988 66.667 0.00 0.00 0.00 4.20
2981 3763 3.299977 TGACGGTGTGGGAGGACG 61.300 66.667 0.00 0.00 0.00 4.79
2982 3764 2.342648 GTGACGGTGTGGGAGGAC 59.657 66.667 0.00 0.00 0.00 3.85
2983 3765 2.920912 GGTGACGGTGTGGGAGGA 60.921 66.667 0.00 0.00 0.00 3.71
2984 3766 4.016706 GGGTGACGGTGTGGGAGG 62.017 72.222 0.00 0.00 0.00 4.30
2985 3767 4.016706 GGGGTGACGGTGTGGGAG 62.017 72.222 0.00 0.00 0.00 4.30
3025 3807 4.452733 GAGGAACTGGACGGGGCG 62.453 72.222 0.00 0.00 41.55 6.13
3026 3808 2.595009 GATGAGGAACTGGACGGGGC 62.595 65.000 0.00 0.00 41.55 5.80
3027 3809 1.522569 GATGAGGAACTGGACGGGG 59.477 63.158 0.00 0.00 41.55 5.73
3028 3810 1.141881 CGATGAGGAACTGGACGGG 59.858 63.158 0.00 0.00 41.55 5.28
3029 3811 1.141881 CCGATGAGGAACTGGACGG 59.858 63.158 0.00 0.00 41.55 4.79
3030 3812 0.458543 CACCGATGAGGAACTGGACG 60.459 60.000 0.00 0.00 41.55 4.79
3031 3813 0.895530 TCACCGATGAGGAACTGGAC 59.104 55.000 0.00 0.00 41.55 4.02
3032 3814 0.895530 GTCACCGATGAGGAACTGGA 59.104 55.000 0.00 0.00 41.55 3.86
3033 3815 0.108138 GGTCACCGATGAGGAACTGG 60.108 60.000 0.00 0.00 41.55 4.00
3034 3816 0.898320 AGGTCACCGATGAGGAACTG 59.102 55.000 0.00 0.00 41.55 3.16
3036 3818 0.175989 GGAGGTCACCGATGAGGAAC 59.824 60.000 0.00 0.00 45.00 3.62
3037 3819 0.976073 GGGAGGTCACCGATGAGGAA 60.976 60.000 0.00 0.00 45.00 3.36
3038 3820 1.381327 GGGAGGTCACCGATGAGGA 60.381 63.158 0.00 0.00 45.00 3.71
3096 3878 4.796231 CGGAAGACGGCGTGGAGG 62.796 72.222 21.19 0.00 39.42 4.30
3100 3882 3.554692 GATGCGGAAGACGGCGTG 61.555 66.667 21.19 2.93 43.67 5.34
3101 3883 4.814294 GGATGCGGAAGACGGCGT 62.814 66.667 14.65 14.65 43.67 5.68
3104 3886 4.891727 CGGGGATGCGGAAGACGG 62.892 72.222 0.00 0.00 44.51 4.79
3114 3896 2.851102 ATGAGGAGGCCGGGGATG 60.851 66.667 2.18 0.00 0.00 3.51
3115 3897 2.527875 GATGAGGAGGCCGGGGAT 60.528 66.667 2.18 0.00 0.00 3.85
3122 3904 4.537433 AAGCGGCGATGAGGAGGC 62.537 66.667 12.98 0.00 0.00 4.70
3123 3905 2.279784 GAAGCGGCGATGAGGAGG 60.280 66.667 12.98 0.00 0.00 4.30
3124 3906 2.656651 CGAAGCGGCGATGAGGAG 60.657 66.667 12.98 0.00 0.00 3.69
3170 3952 1.508808 CGGTAGAGACGGCTAGCTCC 61.509 65.000 15.72 4.10 36.87 4.70
3171 3953 1.943293 CGGTAGAGACGGCTAGCTC 59.057 63.158 15.72 5.17 36.87 4.09
3172 3954 2.188161 GCGGTAGAGACGGCTAGCT 61.188 63.158 15.72 0.00 45.76 3.32
3173 3955 2.332159 GCGGTAGAGACGGCTAGC 59.668 66.667 6.04 6.04 45.76 3.42
3174 3956 2.632541 CGCGGTAGAGACGGCTAG 59.367 66.667 0.00 0.00 46.73 3.42
3175 3957 3.580193 GCGCGGTAGAGACGGCTA 61.580 66.667 8.83 0.00 46.73 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.