Multiple sequence alignment - TraesCS2A01G104600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G104600 chr2A 100.000 4895 0 0 1 4895 57837121 57842015 0.000000e+00 9040.0
1 TraesCS2A01G104600 chr2A 93.688 301 17 2 4215 4513 27746506 27746806 2.690000e-122 449.0
2 TraesCS2A01G104600 chr2A 92.834 307 18 4 4211 4514 707747991 707748296 4.500000e-120 442.0
3 TraesCS2A01G104600 chr2A 92.208 308 17 5 4215 4520 492486383 492486081 3.500000e-116 429.0
4 TraesCS2A01G104600 chr2D 93.011 2790 137 24 1448 4209 56232832 56235591 0.000000e+00 4019.0
5 TraesCS2A01G104600 chr2D 84.165 802 53 25 711 1455 56232008 56232792 0.000000e+00 710.0
6 TraesCS2A01G104600 chr2D 83.544 474 36 21 8 454 56231127 56231585 5.900000e-109 405.0
7 TraesCS2A01G104600 chr2D 87.625 299 35 2 4502 4799 121293607 121293310 3.630000e-91 346.0
8 TraesCS2A01G104600 chr2D 96.429 84 3 0 573 656 56231800 56231883 6.610000e-29 139.0
9 TraesCS2A01G104600 chr2D 93.750 64 3 1 4830 4893 56235626 56235688 1.450000e-15 95.3
10 TraesCS2A01G104600 chr2D 93.548 62 4 0 489 550 56231597 56231658 5.220000e-15 93.5
11 TraesCS2A01G104600 chr2B 92.702 2302 128 19 1938 4209 88976823 88979114 0.000000e+00 3284.0
12 TraesCS2A01G104600 chr2B 84.723 1211 89 28 757 1889 88975516 88976708 0.000000e+00 1123.0
13 TraesCS2A01G104600 chr2B 76.264 455 57 24 32 454 88974655 88975090 1.390000e-45 195.0
14 TraesCS2A01G104600 chr2B 94.444 126 7 0 1820 1945 88976669 88976794 1.390000e-45 195.0
15 TraesCS2A01G104600 chr2B 96.429 84 3 0 573 656 88975293 88975376 6.610000e-29 139.0
16 TraesCS2A01G104600 chr2B 91.000 100 6 3 4799 4895 88979114 88979213 1.110000e-26 132.0
17 TraesCS2A01G104600 chr6B 81.081 740 113 13 2503 3218 635019611 635020347 2.560000e-157 566.0
18 TraesCS2A01G104600 chr1A 93.811 307 15 4 4215 4517 551825322 551825628 4.470000e-125 459.0
19 TraesCS2A01G104600 chr1A 92.434 304 18 5 4214 4514 508163296 508162995 3.500000e-116 429.0
20 TraesCS2A01G104600 chr1A 90.997 311 23 5 4215 4523 547674749 547674442 9.800000e-112 414.0
21 TraesCS2A01G104600 chr1A 89.437 284 27 3 4502 4783 345794219 345794501 6.030000e-94 355.0
22 TraesCS2A01G104600 chr7D 83.333 528 50 15 3125 3649 225675725 225676217 2.080000e-123 453.0
23 TraesCS2A01G104600 chr7D 86.940 268 25 5 3382 3649 637569742 637569999 4.790000e-75 292.0
24 TraesCS2A01G104600 chr7D 100.000 57 0 0 3126 3182 637569562 637569618 6.700000e-19 106.0
25 TraesCS2A01G104600 chr4A 93.311 299 18 2 4215 4511 150293544 150293246 1.620000e-119 440.0
26 TraesCS2A01G104600 chr5D 92.977 299 17 3 4215 4511 52694493 52694789 2.710000e-117 433.0
27 TraesCS2A01G104600 chr4D 83.048 525 41 24 3126 3645 143563519 143563038 2.710000e-117 433.0
28 TraesCS2A01G104600 chr4D 85.328 259 29 3 2503 2752 143563778 143563520 4.860000e-65 259.0
29 TraesCS2A01G104600 chr6A 91.290 310 22 5 4217 4523 16588380 16588687 7.580000e-113 418.0
30 TraesCS2A01G104600 chr6A 89.632 299 26 3 4502 4799 597049041 597048747 4.630000e-100 375.0
31 TraesCS2A01G104600 chr3D 90.365 301 26 3 4502 4800 589730484 589730185 4.590000e-105 392.0
32 TraesCS2A01G104600 chr1B 90.941 287 25 1 4515 4800 684728964 684728678 7.690000e-103 385.0
33 TraesCS2A01G104600 chr3A 88.816 304 31 3 4499 4800 738911282 738911584 2.150000e-98 370.0
34 TraesCS2A01G104600 chr7A 87.459 303 31 7 4502 4800 681717935 681717636 4.690000e-90 342.0
35 TraesCS2A01G104600 chr7A 87.129 303 34 5 4502 4800 538735501 538735802 6.070000e-89 339.0
36 TraesCS2A01G104600 chr7A 84.936 312 19 4 3236 3547 728230690 728230973 1.720000e-74 291.0
37 TraesCS2A01G104600 chr7A 92.793 111 8 0 2642 2752 728230515 728230625 1.410000e-35 161.0
38 TraesCS2A01G104600 chr7A 92.793 111 8 0 2642 2752 728459241 728459131 1.410000e-35 161.0
39 TraesCS2A01G104600 chr7A 100.000 57 0 0 3126 3182 728230626 728230682 6.700000e-19 106.0
40 TraesCS2A01G104600 chr7A 100.000 57 0 0 3126 3182 728459130 728459074 6.700000e-19 106.0
41 TraesCS2A01G104600 chr7A 90.909 55 5 0 3242 3296 728459059 728459005 1.890000e-09 75.0
42 TraesCS2A01G104600 chr5A 86.601 306 36 5 4502 4803 534662976 534663280 2.820000e-87 333.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G104600 chr2A 57837121 57842015 4894 False 9040.000000 9040 100.000000 1 4895 1 chr2A.!!$F2 4894
1 TraesCS2A01G104600 chr2D 56231127 56235688 4561 False 910.300000 4019 90.741167 8 4893 6 chr2D.!!$F1 4885
2 TraesCS2A01G104600 chr2B 88974655 88979213 4558 False 844.666667 3284 89.260333 32 4895 6 chr2B.!!$F1 4863
3 TraesCS2A01G104600 chr6B 635019611 635020347 736 False 566.000000 566 81.081000 2503 3218 1 chr6B.!!$F1 715
4 TraesCS2A01G104600 chr4D 143563038 143563778 740 True 346.000000 433 84.188000 2503 3645 2 chr4D.!!$R1 1142


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
430 472 0.108520 TATTCCGTTCCGCACTGACC 60.109 55.0 0.00 0.00 0.00 4.02 F
1108 1362 0.179134 GCTTCCATCGCACGTAGAGT 60.179 55.0 0.00 0.00 0.00 3.24 F
1431 1734 0.955428 TTCATCTGTCAACGCAGGCC 60.955 55.0 0.00 0.00 37.12 5.19 F
2447 2885 0.247736 GTTCAGAGAGGGCACGTGAT 59.752 55.0 22.23 3.51 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1608 1964 0.460987 CAATCACCGGAGTGGAGCTC 60.461 60.0 9.46 4.71 44.64 4.09 R
2447 2885 0.674581 CATCAGTTTCAGGCTCGGCA 60.675 55.0 0.00 0.00 0.00 5.69 R
2465 2903 0.949105 GACTTTTCTTCCTCGCGGCA 60.949 55.0 6.13 0.00 0.00 5.69 R
4290 4797 0.704076 AGGTGGGCCTTTTCTATGCA 59.296 50.0 4.53 0.00 44.18 3.96 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 74 0.302288 CTCGTCGCCGTTGACAAAAA 59.698 50.000 5.31 0.00 38.84 1.94
81 84 2.795389 GACAAAAACGCGCGGCTC 60.795 61.111 35.22 14.10 0.00 4.70
194 209 2.049433 GTGACGCTGCTACGGTGT 60.049 61.111 0.00 0.00 36.07 4.16
201 227 3.567478 CTGCTACGGTGTGGCGTGA 62.567 63.158 0.90 0.00 42.93 4.35
249 275 2.202783 GGCAATTGGCGACATGGC 60.203 61.111 16.95 2.32 46.16 4.40
259 285 1.766143 GCGACATGGCAACGATCCTC 61.766 60.000 14.18 0.00 42.51 3.71
312 338 2.264794 CCCAACTTCCTCCGGTCG 59.735 66.667 0.00 0.00 0.00 4.79
377 407 2.135933 CACCTCACTCCGTTTTCTCAC 58.864 52.381 0.00 0.00 0.00 3.51
404 446 1.153881 GGAGTACAGACCGAACGCC 60.154 63.158 0.00 0.00 0.00 5.68
417 459 1.488527 GAACGCCTGCTACTATTCCG 58.511 55.000 0.00 0.00 0.00 4.30
430 472 0.108520 TATTCCGTTCCGCACTGACC 60.109 55.000 0.00 0.00 0.00 4.02
439 481 2.668550 GCACTGACCGGGTTGACC 60.669 66.667 6.32 0.00 0.00 4.02
454 496 1.657181 GACCAAACAACGCGGCTTG 60.657 57.895 12.47 9.73 0.00 4.01
455 497 2.354539 CCAAACAACGCGGCTTGG 60.355 61.111 12.47 13.32 32.87 3.61
456 498 3.029735 CAAACAACGCGGCTTGGC 61.030 61.111 12.47 0.00 0.00 4.52
457 499 3.216292 AAACAACGCGGCTTGGCT 61.216 55.556 12.47 0.00 0.00 4.75
458 500 2.781158 AAACAACGCGGCTTGGCTT 61.781 52.632 12.47 2.28 0.00 4.35
459 501 2.952291 AAACAACGCGGCTTGGCTTG 62.952 55.000 12.47 6.43 0.00 4.01
460 502 4.705519 CAACGCGGCTTGGCTTGG 62.706 66.667 12.47 0.00 0.00 3.61
464 506 4.729856 GCGGCTTGGCTTGGCTTG 62.730 66.667 0.00 0.00 0.00 4.01
465 507 4.729856 CGGCTTGGCTTGGCTTGC 62.730 66.667 0.00 0.31 0.00 4.01
466 508 3.308705 GGCTTGGCTTGGCTTGCT 61.309 61.111 10.24 0.00 0.00 3.91
467 509 2.739132 GCTTGGCTTGGCTTGCTT 59.261 55.556 2.77 0.00 0.00 3.91
468 510 1.373873 GCTTGGCTTGGCTTGCTTC 60.374 57.895 2.77 0.00 0.00 3.86
469 511 1.291272 CTTGGCTTGGCTTGCTTCC 59.709 57.895 2.77 0.00 0.00 3.46
470 512 2.163601 CTTGGCTTGGCTTGCTTCCC 62.164 60.000 2.77 0.00 0.00 3.97
471 513 2.283460 GGCTTGGCTTGCTTCCCT 60.283 61.111 2.77 0.00 0.00 4.20
472 514 1.910276 GGCTTGGCTTGCTTCCCTT 60.910 57.895 2.77 0.00 0.00 3.95
473 515 1.588597 GCTTGGCTTGCTTCCCTTC 59.411 57.895 0.00 0.00 0.00 3.46
474 516 1.881903 GCTTGGCTTGCTTCCCTTCC 61.882 60.000 0.00 0.00 0.00 3.46
475 517 1.589716 CTTGGCTTGCTTCCCTTCCG 61.590 60.000 0.00 0.00 0.00 4.30
476 518 2.034221 GGCTTGCTTCCCTTCCGT 59.966 61.111 0.00 0.00 0.00 4.69
477 519 2.335712 GGCTTGCTTCCCTTCCGTG 61.336 63.158 0.00 0.00 0.00 4.94
482 524 2.742372 CTTCCCTTCCGTGCGTGG 60.742 66.667 0.00 0.00 0.00 4.94
484 526 3.234630 TTCCCTTCCGTGCGTGGAG 62.235 63.158 0.00 0.00 39.72 3.86
487 529 4.003788 CTTCCGTGCGTGGAGGGT 62.004 66.667 0.05 0.00 39.72 4.34
517 559 7.061094 CCGAAGCAAAGATAAACAAAGAACATC 59.939 37.037 0.00 0.00 0.00 3.06
518 560 7.061094 CGAAGCAAAGATAAACAAAGAACATCC 59.939 37.037 0.00 0.00 0.00 3.51
533 575 1.001815 ACATCCCGAAAACAAACGCAG 60.002 47.619 0.00 0.00 0.00 5.18
709 920 2.461110 CGATCACCGCGGAAAAGGG 61.461 63.158 35.90 12.34 0.00 3.95
834 1065 4.570663 CCCGGACGCCACTCGATC 62.571 72.222 0.73 0.00 41.67 3.69
862 1101 4.705519 CAGCCAAAGCCAACGCCG 62.706 66.667 0.00 0.00 41.25 6.46
896 1135 4.415332 CACCGGTCGTCCCTGTCG 62.415 72.222 2.59 0.00 0.00 4.35
909 1148 1.284982 CCTGTCGTTGAAGCGGTCAG 61.285 60.000 0.00 0.00 37.61 3.51
948 1187 2.042435 CGCCTCCTTCCTCCTCCT 60.042 66.667 0.00 0.00 0.00 3.69
949 1188 2.131067 CGCCTCCTTCCTCCTCCTC 61.131 68.421 0.00 0.00 0.00 3.71
950 1189 2.131067 GCCTCCTTCCTCCTCCTCG 61.131 68.421 0.00 0.00 0.00 4.63
952 1191 2.042843 TCCTTCCTCCTCCTCGCC 60.043 66.667 0.00 0.00 0.00 5.54
954 1193 3.157949 CTTCCTCCTCCTCGCCCC 61.158 72.222 0.00 0.00 0.00 5.80
955 1194 3.984186 CTTCCTCCTCCTCGCCCCA 62.984 68.421 0.00 0.00 0.00 4.96
977 1225 5.415701 CCACCCAGCGCATATAAATATTTCT 59.584 40.000 11.47 0.00 0.00 2.52
980 1228 5.882557 CCCAGCGCATATAAATATTTCTCCT 59.117 40.000 11.47 0.00 0.00 3.69
982 1230 6.253746 CAGCGCATATAAATATTTCTCCTGC 58.746 40.000 11.47 8.94 0.00 4.85
1080 1334 1.604023 AACAGGGACGCGTCTCTCT 60.604 57.895 37.73 25.31 38.64 3.10
1105 1359 1.202973 CTCGCTTCCATCGCACGTAG 61.203 60.000 0.00 0.00 0.00 3.51
1106 1360 1.226575 CGCTTCCATCGCACGTAGA 60.227 57.895 0.00 0.00 0.00 2.59
1107 1361 1.202973 CGCTTCCATCGCACGTAGAG 61.203 60.000 0.00 0.00 0.00 2.43
1108 1362 0.179134 GCTTCCATCGCACGTAGAGT 60.179 55.000 0.00 0.00 0.00 3.24
1109 1363 1.065102 GCTTCCATCGCACGTAGAGTA 59.935 52.381 0.00 0.00 0.00 2.59
1120 1377 4.092529 CGCACGTAGAGTACTACAAGAAGA 59.907 45.833 0.00 0.00 46.47 2.87
1271 1548 4.368808 CACGCAAAGTGGACGCCG 62.369 66.667 0.00 0.00 46.77 6.46
1272 1549 4.595538 ACGCAAAGTGGACGCCGA 62.596 61.111 0.00 0.00 0.00 5.54
1292 1595 2.493675 GAGGGAAAGTGGGAGATTTTGC 59.506 50.000 0.00 0.00 0.00 3.68
1336 1639 3.978723 CTGTGCTCGAGTGCCTCCG 62.979 68.421 15.13 0.00 0.00 4.63
1415 1718 3.727673 GCGCTGACGATTTTATGCTTTCA 60.728 43.478 0.00 0.00 43.93 2.69
1431 1734 0.955428 TTCATCTGTCAACGCAGGCC 60.955 55.000 0.00 0.00 37.12 5.19
1460 1810 3.714391 TGATTGATCGAGTGATGCTCTG 58.286 45.455 0.00 0.00 41.98 3.35
1468 1818 1.751927 GTGATGCTCTGGGGCCTTG 60.752 63.158 0.84 0.00 0.00 3.61
1494 1844 2.058001 ATGGCGATCTCGGACACCA 61.058 57.895 1.34 0.75 40.23 4.17
1608 1964 1.571919 CAGCCTCCGAGGTAAATTCG 58.428 55.000 16.09 0.00 37.80 3.34
1609 1965 1.136305 CAGCCTCCGAGGTAAATTCGA 59.864 52.381 16.09 0.00 40.36 3.71
1611 1967 1.854227 CCTCCGAGGTAAATTCGAGC 58.146 55.000 6.24 0.00 40.36 5.03
1615 1971 1.136305 CCGAGGTAAATTCGAGCTCCA 59.864 52.381 8.47 0.00 40.36 3.86
1655 2027 4.992688 TCGCATTTCCATGTAATTTGTCC 58.007 39.130 0.00 0.00 32.28 4.02
1681 2053 5.633601 GGGTTTCTGATTGGATTTCGTTTTC 59.366 40.000 0.00 0.00 0.00 2.29
1841 2243 2.524394 ACCAGTGGCACGACTCCT 60.524 61.111 9.78 0.00 0.00 3.69
2019 2457 3.345808 GCAGTTCTCAACCGCGCA 61.346 61.111 8.75 0.00 0.00 6.09
2021 2459 1.421485 CAGTTCTCAACCGCGCATC 59.579 57.895 8.75 0.00 0.00 3.91
2077 2515 2.651361 CCCGTCTTCAGCGAGTGT 59.349 61.111 0.00 0.00 0.00 3.55
2120 2558 1.055040 AGACTCAGAGCAGCCACTTT 58.945 50.000 0.00 0.00 0.00 2.66
2365 2803 3.535629 CTGGTGGCAGCTCCGAACA 62.536 63.158 18.53 0.00 37.80 3.18
2440 2878 1.965754 ATGCGAGGTTCAGAGAGGGC 61.966 60.000 0.00 0.00 0.00 5.19
2447 2885 0.247736 GTTCAGAGAGGGCACGTGAT 59.752 55.000 22.23 3.51 0.00 3.06
2465 2903 0.254178 ATGCCGAGCCTGAAACTGAT 59.746 50.000 0.00 0.00 0.00 2.90
2489 2933 1.807142 GCGAGGAAGAAAAGTCCAAGG 59.193 52.381 0.00 0.00 37.65 3.61
2497 2941 1.000171 GAAAAGTCCAAGGCCAAGCAG 60.000 52.381 5.01 0.00 0.00 4.24
2525 2978 4.619140 GCGCCAATGCCTGATCGC 62.619 66.667 0.00 0.00 38.78 4.58
2831 3300 4.853050 AGCAGAGCTCGCCATGCC 62.853 66.667 18.93 4.98 39.51 4.40
2834 3303 4.479993 AGAGCTCGCCATGCCACC 62.480 66.667 8.37 0.00 0.00 4.61
2835 3304 4.783621 GAGCTCGCCATGCCACCA 62.784 66.667 0.00 0.00 0.00 4.17
2998 3476 2.661537 CTGCTGCGACCACGTCAA 60.662 61.111 0.00 0.00 41.98 3.18
3053 3537 4.116328 CCGTCGAGAGCGCAGGAA 62.116 66.667 11.47 0.00 36.39 3.36
3641 4130 1.215647 CGACGACAGGAAGGGGAAG 59.784 63.158 0.00 0.00 0.00 3.46
3656 4145 1.817099 GAAGGGCATCTGCGTGGAG 60.817 63.158 0.00 0.00 43.26 3.86
3720 4209 1.807886 CGGTCGAACGGGAGAAGAT 59.192 57.895 16.82 0.00 0.00 2.40
3722 4211 1.104630 GGTCGAACGGGAGAAGATCT 58.895 55.000 0.00 0.00 0.00 2.75
3778 4267 0.320247 GCCATCAGGATCAGGTAGCG 60.320 60.000 0.00 0.00 36.89 4.26
3815 4311 6.305639 GGCTCGTCGTATATACTGTAGAAAG 58.694 44.000 11.05 3.95 0.00 2.62
3819 4315 8.081208 TCGTCGTATATACTGTAGAAAGAAGG 57.919 38.462 11.05 0.00 0.00 3.46
3836 4332 2.861147 AGGTAGTTTCAGTTCAGGCC 57.139 50.000 0.00 0.00 0.00 5.19
3860 4356 6.919662 CCATGGAATTCTGATGGTATTTTTCG 59.080 38.462 20.54 0.00 33.26 3.46
3880 4376 3.118408 TCGGGTGTTGGAATTCTGATAGG 60.118 47.826 5.23 0.00 0.00 2.57
3908 4404 7.119262 AGAGTGGATTGTTGTTTAGATTTACCG 59.881 37.037 0.00 0.00 0.00 4.02
4006 4502 7.116075 AGTGTAGATACTCAGTCTCTCAATGT 58.884 38.462 0.00 0.00 0.00 2.71
4016 4512 6.162079 TCAGTCTCTCAATGTTGTGATTCTC 58.838 40.000 0.00 0.00 31.23 2.87
4026 4522 5.102953 TGTTGTGATTCTCAGGATAAGGG 57.897 43.478 0.00 0.00 0.00 3.95
4027 4523 4.782691 TGTTGTGATTCTCAGGATAAGGGA 59.217 41.667 0.00 0.00 0.00 4.20
4029 4525 5.620738 TGTGATTCTCAGGATAAGGGAAG 57.379 43.478 0.00 0.00 0.00 3.46
4030 4526 5.280499 TGTGATTCTCAGGATAAGGGAAGA 58.720 41.667 0.00 0.00 0.00 2.87
4031 4527 5.907662 TGTGATTCTCAGGATAAGGGAAGAT 59.092 40.000 0.00 0.00 0.00 2.40
4032 4528 6.042552 TGTGATTCTCAGGATAAGGGAAGATC 59.957 42.308 0.00 0.00 0.00 2.75
4033 4529 6.269769 GTGATTCTCAGGATAAGGGAAGATCT 59.730 42.308 0.00 0.00 0.00 2.75
4034 4530 7.453126 GTGATTCTCAGGATAAGGGAAGATCTA 59.547 40.741 0.00 0.00 0.00 1.98
4035 4531 7.673504 TGATTCTCAGGATAAGGGAAGATCTAG 59.326 40.741 0.00 0.00 0.00 2.43
4036 4532 5.329399 TCTCAGGATAAGGGAAGATCTAGC 58.671 45.833 0.00 0.00 0.00 3.42
4142 4645 0.312729 GTTTGTAAGTTGCCACGGGG 59.687 55.000 0.00 0.00 37.18 5.73
4187 4691 7.799447 TGACATACGAGGTTTAATTTGAAAACG 59.201 33.333 0.00 0.00 37.64 3.60
4189 4693 8.130469 ACATACGAGGTTTAATTTGAAAACGTT 58.870 29.630 0.00 0.00 37.64 3.99
4194 4701 7.629085 CGAGGTTTAATTTGAAAACGTTTGTTG 59.371 33.333 15.46 0.00 38.62 3.33
4196 4703 8.989980 AGGTTTAATTTGAAAACGTTTGTTGAA 58.010 25.926 15.46 7.93 38.62 2.69
4197 4704 9.042632 GGTTTAATTTGAAAACGTTTGTTGAAC 57.957 29.630 15.46 15.10 38.62 3.18
4203 4710 6.566310 TGAAAACGTTTGTTGAACATGATG 57.434 33.333 15.46 0.00 38.62 3.07
4207 4714 8.864069 AAAACGTTTGTTGAACATGATGATTA 57.136 26.923 15.46 0.00 38.62 1.75
4208 4715 9.474920 AAAACGTTTGTTGAACATGATGATTAT 57.525 25.926 15.46 0.00 38.62 1.28
4209 4716 8.673626 AACGTTTGTTGAACATGATGATTATC 57.326 30.769 0.00 0.00 38.18 1.75
4210 4717 8.044060 ACGTTTGTTGAACATGATGATTATCT 57.956 30.769 0.00 0.00 38.18 1.98
4212 4719 9.003112 CGTTTGTTGAACATGATGATTATCTTC 57.997 33.333 0.00 1.68 38.18 2.87
4255 4762 9.883142 ATAGCTAGCCTCATTAACATATTTCTC 57.117 33.333 12.13 0.00 0.00 2.87
4256 4763 7.972301 AGCTAGCCTCATTAACATATTTCTCT 58.028 34.615 12.13 0.00 0.00 3.10
4257 4764 8.093927 AGCTAGCCTCATTAACATATTTCTCTC 58.906 37.037 12.13 0.00 0.00 3.20
4258 4765 7.875041 GCTAGCCTCATTAACATATTTCTCTCA 59.125 37.037 2.29 0.00 0.00 3.27
4259 4766 9.770097 CTAGCCTCATTAACATATTTCTCTCAA 57.230 33.333 0.00 0.00 0.00 3.02
4260 4767 8.443953 AGCCTCATTAACATATTTCTCTCAAC 57.556 34.615 0.00 0.00 0.00 3.18
4261 4768 8.049117 AGCCTCATTAACATATTTCTCTCAACA 58.951 33.333 0.00 0.00 0.00 3.33
4262 4769 8.844244 GCCTCATTAACATATTTCTCTCAACAT 58.156 33.333 0.00 0.00 0.00 2.71
4264 4771 9.661187 CTCATTAACATATTTCTCTCAACATGC 57.339 33.333 0.00 0.00 0.00 4.06
4265 4772 9.176460 TCATTAACATATTTCTCTCAACATGCA 57.824 29.630 0.00 0.00 0.00 3.96
4266 4773 9.791820 CATTAACATATTTCTCTCAACATGCAA 57.208 29.630 0.00 0.00 0.00 4.08
4268 4775 5.888105 ACATATTTCTCTCAACATGCAAGC 58.112 37.500 0.00 0.00 0.00 4.01
4269 4776 5.416639 ACATATTTCTCTCAACATGCAAGCA 59.583 36.000 0.00 0.00 0.00 3.91
4270 4777 6.096423 ACATATTTCTCTCAACATGCAAGCAT 59.904 34.615 0.86 0.86 37.08 3.79
4279 4786 3.656457 ATGCAAGCATGACACCTCA 57.344 47.368 6.76 0.00 35.03 3.86
4280 4787 2.139323 ATGCAAGCATGACACCTCAT 57.861 45.000 6.76 0.00 37.65 2.90
4281 4788 1.456296 TGCAAGCATGACACCTCATC 58.544 50.000 0.00 0.00 34.65 2.92
4282 4789 1.271488 TGCAAGCATGACACCTCATCA 60.271 47.619 0.00 0.00 34.65 3.07
4283 4790 2.022195 GCAAGCATGACACCTCATCAT 58.978 47.619 0.00 0.00 34.65 2.45
4284 4791 2.426024 GCAAGCATGACACCTCATCATT 59.574 45.455 0.00 0.00 34.65 2.57
4285 4792 3.488721 GCAAGCATGACACCTCATCATTC 60.489 47.826 0.00 0.00 34.65 2.67
4286 4793 3.639672 AGCATGACACCTCATCATTCA 57.360 42.857 0.00 0.00 34.65 2.57
4287 4794 3.959293 AGCATGACACCTCATCATTCAA 58.041 40.909 0.00 0.00 34.65 2.69
4288 4795 3.693085 AGCATGACACCTCATCATTCAAC 59.307 43.478 0.00 0.00 34.65 3.18
4289 4796 3.441222 GCATGACACCTCATCATTCAACA 59.559 43.478 0.00 0.00 34.65 3.33
4290 4797 4.097437 GCATGACACCTCATCATTCAACAT 59.903 41.667 0.00 0.00 34.65 2.71
4291 4798 5.578776 CATGACACCTCATCATTCAACATG 58.421 41.667 0.00 0.00 34.65 3.21
4292 4799 3.441222 TGACACCTCATCATTCAACATGC 59.559 43.478 0.00 0.00 0.00 4.06
4293 4800 3.423749 ACACCTCATCATTCAACATGCA 58.576 40.909 0.00 0.00 0.00 3.96
4294 4801 4.021229 ACACCTCATCATTCAACATGCAT 58.979 39.130 0.00 0.00 0.00 3.96
4295 4802 5.195185 ACACCTCATCATTCAACATGCATA 58.805 37.500 0.00 0.00 0.00 3.14
4296 4803 5.298527 ACACCTCATCATTCAACATGCATAG 59.701 40.000 0.00 0.00 0.00 2.23
4297 4804 5.529800 CACCTCATCATTCAACATGCATAGA 59.470 40.000 0.00 0.00 0.00 1.98
4298 4805 6.038936 CACCTCATCATTCAACATGCATAGAA 59.961 38.462 0.00 4.84 0.00 2.10
4299 4806 6.604396 ACCTCATCATTCAACATGCATAGAAA 59.396 34.615 0.00 0.00 0.00 2.52
4300 4807 7.123098 ACCTCATCATTCAACATGCATAGAAAA 59.877 33.333 0.00 0.00 0.00 2.29
4301 4808 7.648112 CCTCATCATTCAACATGCATAGAAAAG 59.352 37.037 0.00 2.65 0.00 2.27
4302 4809 7.485810 TCATCATTCAACATGCATAGAAAAGG 58.514 34.615 0.00 0.34 0.00 3.11
4303 4810 5.653507 TCATTCAACATGCATAGAAAAGGC 58.346 37.500 0.00 0.00 0.00 4.35
4304 4811 4.454728 TTCAACATGCATAGAAAAGGCC 57.545 40.909 0.00 0.00 0.00 5.19
4305 4812 2.760092 TCAACATGCATAGAAAAGGCCC 59.240 45.455 0.00 0.00 0.00 5.80
4306 4813 2.496871 CAACATGCATAGAAAAGGCCCA 59.503 45.455 0.00 0.00 0.00 5.36
4307 4814 2.102578 ACATGCATAGAAAAGGCCCAC 58.897 47.619 0.00 0.00 0.00 4.61
4308 4815 1.410153 CATGCATAGAAAAGGCCCACC 59.590 52.381 0.00 0.00 0.00 4.61
4317 4824 2.036256 AGGCCCACCTCAACATGC 59.964 61.111 0.00 0.00 46.34 4.06
4318 4825 2.283101 GGCCCACCTCAACATGCA 60.283 61.111 0.00 0.00 0.00 3.96
4319 4826 1.907807 GGCCCACCTCAACATGCAA 60.908 57.895 0.00 0.00 0.00 4.08
4320 4827 1.290009 GCCCACCTCAACATGCAAC 59.710 57.895 0.00 0.00 0.00 4.17
4321 4828 1.181098 GCCCACCTCAACATGCAACT 61.181 55.000 0.00 0.00 0.00 3.16
4322 4829 1.886222 GCCCACCTCAACATGCAACTA 60.886 52.381 0.00 0.00 0.00 2.24
4323 4830 2.726821 CCCACCTCAACATGCAACTAT 58.273 47.619 0.00 0.00 0.00 2.12
4324 4831 2.424601 CCCACCTCAACATGCAACTATG 59.575 50.000 0.00 0.00 0.00 2.23
4325 4832 2.424601 CCACCTCAACATGCAACTATGG 59.575 50.000 0.00 0.00 32.32 2.74
4326 4833 3.346315 CACCTCAACATGCAACTATGGA 58.654 45.455 0.00 0.00 32.32 3.41
4327 4834 3.949754 CACCTCAACATGCAACTATGGAT 59.050 43.478 0.00 0.00 38.25 3.41
4328 4835 5.125356 CACCTCAACATGCAACTATGGATA 58.875 41.667 0.00 0.00 35.11 2.59
4329 4836 5.766670 CACCTCAACATGCAACTATGGATAT 59.233 40.000 0.00 0.00 35.11 1.63
4330 4837 6.263842 CACCTCAACATGCAACTATGGATATT 59.736 38.462 0.00 0.00 35.11 1.28
4331 4838 7.445096 CACCTCAACATGCAACTATGGATATTA 59.555 37.037 0.00 0.00 35.11 0.98
4332 4839 7.998383 ACCTCAACATGCAACTATGGATATTAA 59.002 33.333 0.00 0.00 35.11 1.40
4333 4840 8.849168 CCTCAACATGCAACTATGGATATTAAA 58.151 33.333 0.00 0.00 35.11 1.52
4350 4857 9.034544 GGATATTAAAAATCCACTTCAACATGC 57.965 33.333 12.97 0.00 42.21 4.06
4351 4858 9.585099 GATATTAAAAATCCACTTCAACATGCA 57.415 29.630 0.00 0.00 0.00 3.96
4352 4859 9.941325 ATATTAAAAATCCACTTCAACATGCAA 57.059 25.926 0.00 0.00 0.00 4.08
4353 4860 8.674263 ATTAAAAATCCACTTCAACATGCAAA 57.326 26.923 0.00 0.00 0.00 3.68
4354 4861 5.989551 AAAATCCACTTCAACATGCAAAC 57.010 34.783 0.00 0.00 0.00 2.93
4355 4862 4.669206 AATCCACTTCAACATGCAAACA 57.331 36.364 0.00 0.00 0.00 2.83
4356 4863 4.877378 ATCCACTTCAACATGCAAACAT 57.123 36.364 0.00 0.00 36.79 2.71
4378 4885 5.092554 TGCATGCATGAAAAATCCATTCT 57.907 34.783 30.64 0.00 0.00 2.40
4379 4886 6.223351 TGCATGCATGAAAAATCCATTCTA 57.777 33.333 30.64 0.00 0.00 2.10
4380 4887 6.822442 TGCATGCATGAAAAATCCATTCTAT 58.178 32.000 30.64 0.00 0.00 1.98
4381 4888 7.276658 TGCATGCATGAAAAATCCATTCTATT 58.723 30.769 30.64 0.00 0.00 1.73
4382 4889 8.422566 TGCATGCATGAAAAATCCATTCTATTA 58.577 29.630 30.64 0.00 0.00 0.98
4383 4890 9.431887 GCATGCATGAAAAATCCATTCTATTAT 57.568 29.630 30.64 0.00 0.00 1.28
4385 4892 9.938280 ATGCATGAAAAATCCATTCTATTATGG 57.062 29.630 0.00 0.00 45.34 2.74
4386 4893 8.926374 TGCATGAAAAATCCATTCTATTATGGT 58.074 29.630 0.00 0.00 44.48 3.55
4472 4979 8.348285 AGCCAAAATCTTACTAAAATACTGCA 57.652 30.769 0.00 0.00 0.00 4.41
4473 4980 8.802267 AGCCAAAATCTTACTAAAATACTGCAA 58.198 29.630 0.00 0.00 0.00 4.08
4474 4981 9.418045 GCCAAAATCTTACTAAAATACTGCAAA 57.582 29.630 0.00 0.00 0.00 3.68
4485 4992 9.586435 ACTAAAATACTGCAAAAATATTCCTGC 57.414 29.630 12.58 12.58 35.32 4.85
4486 4993 9.585099 CTAAAATACTGCAAAAATATTCCTGCA 57.415 29.630 18.36 18.36 42.28 4.41
4487 4994 8.845413 AAAATACTGCAAAAATATTCCTGCAA 57.155 26.923 19.37 10.43 43.74 4.08
4488 4995 9.452287 AAAATACTGCAAAAATATTCCTGCAAT 57.548 25.926 19.37 14.70 43.74 3.56
4491 4998 7.832503 ACTGCAAAAATATTCCTGCAATAAC 57.167 32.000 19.37 0.00 43.74 1.89
4492 4999 6.531240 ACTGCAAAAATATTCCTGCAATAACG 59.469 34.615 19.37 12.66 43.74 3.18
4493 5000 6.393990 TGCAAAAATATTCCTGCAATAACGT 58.606 32.000 17.57 0.00 41.61 3.99
4494 5001 6.529829 TGCAAAAATATTCCTGCAATAACGTC 59.470 34.615 17.57 0.00 41.61 4.34
4495 5002 6.751888 GCAAAAATATTCCTGCAATAACGTCT 59.248 34.615 13.97 0.00 34.87 4.18
4496 5003 7.253750 GCAAAAATATTCCTGCAATAACGTCTG 60.254 37.037 13.97 0.00 34.87 3.51
4497 5004 6.377327 AAATATTCCTGCAATAACGTCTGG 57.623 37.500 0.00 0.00 30.39 3.86
4498 5005 2.107950 TTCCTGCAATAACGTCTGGG 57.892 50.000 0.00 0.00 0.00 4.45
4499 5006 0.251916 TCCTGCAATAACGTCTGGGG 59.748 55.000 0.00 0.00 0.00 4.96
4500 5007 1.376609 CCTGCAATAACGTCTGGGGC 61.377 60.000 0.00 0.00 0.00 5.80
4501 5008 0.676466 CTGCAATAACGTCTGGGGCA 60.676 55.000 0.00 0.00 0.00 5.36
4502 5009 0.034574 TGCAATAACGTCTGGGGCAT 60.035 50.000 0.00 0.00 0.00 4.40
4503 5010 0.663153 GCAATAACGTCTGGGGCATC 59.337 55.000 0.00 0.00 0.00 3.91
4504 5011 2.016604 GCAATAACGTCTGGGGCATCA 61.017 52.381 0.00 0.00 0.00 3.07
4505 5012 2.575532 CAATAACGTCTGGGGCATCAT 58.424 47.619 0.00 0.00 0.00 2.45
4506 5013 2.549754 CAATAACGTCTGGGGCATCATC 59.450 50.000 0.00 0.00 0.00 2.92
4507 5014 1.496060 TAACGTCTGGGGCATCATCT 58.504 50.000 0.00 0.00 0.00 2.90
4508 5015 1.496060 AACGTCTGGGGCATCATCTA 58.504 50.000 0.00 0.00 0.00 1.98
4509 5016 1.043816 ACGTCTGGGGCATCATCTAG 58.956 55.000 0.00 0.00 0.00 2.43
4510 5017 1.043816 CGTCTGGGGCATCATCTAGT 58.956 55.000 0.00 0.00 0.00 2.57
4511 5018 2.239400 CGTCTGGGGCATCATCTAGTA 58.761 52.381 0.00 0.00 0.00 1.82
4512 5019 2.828520 CGTCTGGGGCATCATCTAGTAT 59.171 50.000 0.00 0.00 0.00 2.12
4513 5020 3.259374 CGTCTGGGGCATCATCTAGTATT 59.741 47.826 0.00 0.00 0.00 1.89
4514 5021 4.262635 CGTCTGGGGCATCATCTAGTATTT 60.263 45.833 0.00 0.00 0.00 1.40
4515 5022 5.047306 CGTCTGGGGCATCATCTAGTATTTA 60.047 44.000 0.00 0.00 0.00 1.40
4516 5023 6.518369 CGTCTGGGGCATCATCTAGTATTTAA 60.518 42.308 0.00 0.00 0.00 1.52
4517 5024 7.224297 GTCTGGGGCATCATCTAGTATTTAAA 58.776 38.462 0.00 0.00 0.00 1.52
4518 5025 7.885399 GTCTGGGGCATCATCTAGTATTTAAAT 59.115 37.037 5.89 5.89 0.00 1.40
4519 5026 9.111519 TCTGGGGCATCATCTAGTATTTAAATA 57.888 33.333 3.71 3.71 0.00 1.40
4520 5027 9.388506 CTGGGGCATCATCTAGTATTTAAATAG 57.611 37.037 8.18 0.00 0.00 1.73
4521 5028 8.890472 TGGGGCATCATCTAGTATTTAAATAGT 58.110 33.333 17.51 17.51 0.00 2.12
4522 5029 9.740710 GGGGCATCATCTAGTATTTAAATAGTT 57.259 33.333 18.37 8.60 0.00 2.24
4529 5036 9.668497 CATCTAGTATTTAAATAGTTAGCCCCC 57.332 37.037 18.37 0.81 0.00 5.40
4530 5037 8.802057 TCTAGTATTTAAATAGTTAGCCCCCA 57.198 34.615 18.37 0.63 0.00 4.96
4531 5038 9.401496 TCTAGTATTTAAATAGTTAGCCCCCAT 57.599 33.333 18.37 0.00 0.00 4.00
4545 5052 9.128715 AGTTAGCCCCCATTAATATATTTCTCT 57.871 33.333 2.68 0.00 0.00 3.10
4546 5053 9.397280 GTTAGCCCCCATTAATATATTTCTCTC 57.603 37.037 2.68 0.00 0.00 3.20
4547 5054 7.588866 AGCCCCCATTAATATATTTCTCTCA 57.411 36.000 2.68 0.00 0.00 3.27
4548 5055 8.000171 AGCCCCCATTAATATATTTCTCTCAA 58.000 34.615 2.68 0.00 0.00 3.02
4549 5056 7.890655 AGCCCCCATTAATATATTTCTCTCAAC 59.109 37.037 2.68 0.00 0.00 3.18
4550 5057 7.669722 GCCCCCATTAATATATTTCTCTCAACA 59.330 37.037 2.68 0.00 0.00 3.33
4551 5058 9.759473 CCCCCATTAATATATTTCTCTCAACAT 57.241 33.333 2.68 0.00 0.00 2.71
4561 5068 4.952262 TTCTCTCAACATACAAGCATGC 57.048 40.909 10.51 10.51 0.00 4.06
4562 5069 3.273434 TCTCTCAACATACAAGCATGCC 58.727 45.455 15.66 0.00 0.00 4.40
4563 5070 3.011818 CTCTCAACATACAAGCATGCCA 58.988 45.455 15.66 0.00 0.00 4.92
4564 5071 2.749076 TCTCAACATACAAGCATGCCAC 59.251 45.455 15.66 0.00 0.00 5.01
4565 5072 1.818060 TCAACATACAAGCATGCCACC 59.182 47.619 15.66 0.00 0.00 4.61
4566 5073 1.820519 CAACATACAAGCATGCCACCT 59.179 47.619 15.66 0.00 0.00 4.00
4567 5074 1.755179 ACATACAAGCATGCCACCTC 58.245 50.000 15.66 0.00 0.00 3.85
4568 5075 1.004628 ACATACAAGCATGCCACCTCA 59.995 47.619 15.66 0.00 0.00 3.86
4569 5076 2.304092 CATACAAGCATGCCACCTCAT 58.696 47.619 15.66 0.00 0.00 2.90
4570 5077 2.042686 TACAAGCATGCCACCTCATC 57.957 50.000 15.66 0.00 0.00 2.92
4571 5078 0.038599 ACAAGCATGCCACCTCATCA 59.961 50.000 15.66 0.00 0.00 3.07
4572 5079 1.341679 ACAAGCATGCCACCTCATCAT 60.342 47.619 15.66 0.00 0.00 2.45
4573 5080 1.754803 CAAGCATGCCACCTCATCATT 59.245 47.619 15.66 0.00 0.00 2.57
4574 5081 1.688772 AGCATGCCACCTCATCATTC 58.311 50.000 15.66 0.00 0.00 2.67
4575 5082 1.064240 AGCATGCCACCTCATCATTCA 60.064 47.619 15.66 0.00 0.00 2.57
4576 5083 1.752498 GCATGCCACCTCATCATTCAA 59.248 47.619 6.36 0.00 0.00 2.69
4577 5084 2.480759 GCATGCCACCTCATCATTCAAC 60.481 50.000 6.36 0.00 0.00 3.18
4578 5085 2.583024 TGCCACCTCATCATTCAACA 57.417 45.000 0.00 0.00 0.00 3.33
4579 5086 3.090210 TGCCACCTCATCATTCAACAT 57.910 42.857 0.00 0.00 0.00 2.71
4580 5087 2.756207 TGCCACCTCATCATTCAACATG 59.244 45.455 0.00 0.00 0.00 3.21
4581 5088 2.480759 GCCACCTCATCATTCAACATGC 60.481 50.000 0.00 0.00 0.00 4.06
4582 5089 2.756207 CCACCTCATCATTCAACATGCA 59.244 45.455 0.00 0.00 0.00 3.96
4583 5090 3.383505 CCACCTCATCATTCAACATGCAT 59.616 43.478 0.00 0.00 0.00 3.96
4584 5091 4.359706 CACCTCATCATTCAACATGCATG 58.640 43.478 25.09 25.09 0.00 4.06
4585 5092 4.097286 CACCTCATCATTCAACATGCATGA 59.903 41.667 32.75 11.13 34.74 3.07
4586 5093 4.707934 ACCTCATCATTCAACATGCATGAA 59.292 37.500 32.75 18.21 34.00 2.57
4587 5094 5.186215 ACCTCATCATTCAACATGCATGAAA 59.814 36.000 32.75 21.57 39.98 2.69
4588 5095 6.103330 CCTCATCATTCAACATGCATGAAAA 58.897 36.000 32.75 21.24 39.98 2.29
4589 5096 6.592220 CCTCATCATTCAACATGCATGAAAAA 59.408 34.615 32.75 20.91 39.98 1.94
4590 5097 7.201522 CCTCATCATTCAACATGCATGAAAAAG 60.202 37.037 32.75 18.17 39.98 2.27
4591 5098 6.592220 TCATCATTCAACATGCATGAAAAAGG 59.408 34.615 32.75 21.41 39.98 3.11
4592 5099 4.691685 TCATTCAACATGCATGAAAAAGGC 59.308 37.500 32.75 0.00 39.98 4.35
4593 5100 4.339872 TTCAACATGCATGAAAAAGGCT 57.660 36.364 32.75 4.93 36.25 4.58
4594 5101 3.916761 TCAACATGCATGAAAAAGGCTC 58.083 40.909 32.75 0.00 36.25 4.70
4595 5102 3.321396 TCAACATGCATGAAAAAGGCTCA 59.679 39.130 32.75 1.94 36.25 4.26
4596 5103 3.308438 ACATGCATGAAAAAGGCTCAC 57.692 42.857 32.75 0.00 36.25 3.51
4597 5104 2.028748 ACATGCATGAAAAAGGCTCACC 60.029 45.455 32.75 0.00 36.25 4.02
4606 5113 2.031163 AGGCTCACCTCAACACGC 59.969 61.111 0.00 0.00 46.34 5.34
4607 5114 2.280797 GGCTCACCTCAACACGCA 60.281 61.111 0.00 0.00 0.00 5.24
4608 5115 1.891919 GGCTCACCTCAACACGCAA 60.892 57.895 0.00 0.00 0.00 4.85
4609 5116 1.279840 GCTCACCTCAACACGCAAC 59.720 57.895 0.00 0.00 0.00 4.17
4610 5117 1.160329 GCTCACCTCAACACGCAACT 61.160 55.000 0.00 0.00 0.00 3.16
4611 5118 1.872237 GCTCACCTCAACACGCAACTA 60.872 52.381 0.00 0.00 0.00 2.24
4612 5119 2.688507 CTCACCTCAACACGCAACTAT 58.311 47.619 0.00 0.00 0.00 2.12
4613 5120 2.412870 TCACCTCAACACGCAACTATG 58.587 47.619 0.00 0.00 0.00 2.23
4631 5138 7.781056 CAACTATGCATAATAAAAACCCACCT 58.219 34.615 8.00 0.00 0.00 4.00
4632 5139 7.582667 ACTATGCATAATAAAAACCCACCTC 57.417 36.000 8.00 0.00 0.00 3.85
4633 5140 7.122715 ACTATGCATAATAAAAACCCACCTCA 58.877 34.615 8.00 0.00 0.00 3.86
4634 5141 6.865834 ATGCATAATAAAAACCCACCTCAA 57.134 33.333 0.00 0.00 0.00 3.02
4635 5142 6.031751 TGCATAATAAAAACCCACCTCAAC 57.968 37.500 0.00 0.00 0.00 3.18
4636 5143 5.540337 TGCATAATAAAAACCCACCTCAACA 59.460 36.000 0.00 0.00 0.00 3.33
4637 5144 6.212388 TGCATAATAAAAACCCACCTCAACAT 59.788 34.615 0.00 0.00 0.00 2.71
4638 5145 6.534793 GCATAATAAAAACCCACCTCAACATG 59.465 38.462 0.00 0.00 0.00 3.21
4639 5146 2.908688 AAAAACCCACCTCAACATGC 57.091 45.000 0.00 0.00 0.00 4.06
4640 5147 1.786937 AAAACCCACCTCAACATGCA 58.213 45.000 0.00 0.00 0.00 3.96
4641 5148 1.786937 AAACCCACCTCAACATGCAA 58.213 45.000 0.00 0.00 0.00 4.08
4642 5149 1.786937 AACCCACCTCAACATGCAAA 58.213 45.000 0.00 0.00 0.00 3.68
4643 5150 1.039856 ACCCACCTCAACATGCAAAC 58.960 50.000 0.00 0.00 0.00 2.93
4644 5151 1.039068 CCCACCTCAACATGCAAACA 58.961 50.000 0.00 0.00 0.00 2.83
4645 5152 1.619827 CCCACCTCAACATGCAAACAT 59.380 47.619 0.00 0.00 36.79 2.71
4666 5173 2.994578 TGCATGCATGAAAATTTCACCG 59.005 40.909 30.64 6.59 43.48 4.94
4667 5174 2.995258 GCATGCATGAAAATTTCACCGT 59.005 40.909 30.64 4.09 43.48 4.83
4668 5175 4.172505 GCATGCATGAAAATTTCACCGTA 58.827 39.130 30.64 5.49 43.48 4.02
4669 5176 4.805192 GCATGCATGAAAATTTCACCGTAT 59.195 37.500 30.64 7.52 43.48 3.06
4670 5177 5.291614 GCATGCATGAAAATTTCACCGTATT 59.708 36.000 30.64 0.00 43.48 1.89
4671 5178 6.475076 GCATGCATGAAAATTTCACCGTATTA 59.525 34.615 30.64 0.00 43.48 0.98
4672 5179 7.169645 GCATGCATGAAAATTTCACCGTATTAT 59.830 33.333 30.64 0.00 43.48 1.28
4673 5180 7.984002 TGCATGAAAATTTCACCGTATTATG 57.016 32.000 10.91 4.16 43.48 1.90
4674 5181 6.475076 TGCATGAAAATTTCACCGTATTATGC 59.525 34.615 10.91 13.76 43.48 3.14
4675 5182 6.697019 GCATGAAAATTTCACCGTATTATGCT 59.303 34.615 10.91 0.00 43.48 3.79
4676 5183 7.860373 GCATGAAAATTTCACCGTATTATGCTA 59.140 33.333 10.91 0.00 43.48 3.49
4677 5184 9.897744 CATGAAAATTTCACCGTATTATGCTAT 57.102 29.630 10.91 0.00 43.48 2.97
4683 5190 9.569122 AATTTCACCGTATTATGCTATTTACCT 57.431 29.630 0.00 0.00 0.00 3.08
4684 5191 8.967664 TTTCACCGTATTATGCTATTTACCTT 57.032 30.769 0.00 0.00 0.00 3.50
4685 5192 8.967664 TTCACCGTATTATGCTATTTACCTTT 57.032 30.769 0.00 0.00 0.00 3.11
4739 5246 9.868277 TTCCAAATATTCATGTTTCACATAACC 57.132 29.630 0.00 0.00 36.53 2.85
4740 5247 9.029368 TCCAAATATTCATGTTTCACATAACCA 57.971 29.630 0.00 0.00 36.53 3.67
4741 5248 9.650539 CCAAATATTCATGTTTCACATAACCAA 57.349 29.630 0.00 0.00 36.53 3.67
4745 5252 7.961325 ATTCATGTTTCACATAACCAAAACC 57.039 32.000 0.00 0.00 36.53 3.27
4746 5253 6.723298 TCATGTTTCACATAACCAAAACCT 57.277 33.333 0.00 0.00 36.53 3.50
4747 5254 6.744112 TCATGTTTCACATAACCAAAACCTC 58.256 36.000 0.00 0.00 36.53 3.85
4748 5255 6.322456 TCATGTTTCACATAACCAAAACCTCA 59.678 34.615 0.00 0.00 36.53 3.86
4749 5256 6.723298 TGTTTCACATAACCAAAACCTCAT 57.277 33.333 0.00 0.00 32.04 2.90
4750 5257 7.118496 TGTTTCACATAACCAAAACCTCATT 57.882 32.000 0.00 0.00 32.04 2.57
4751 5258 6.983307 TGTTTCACATAACCAAAACCTCATTG 59.017 34.615 0.00 0.00 32.04 2.82
4752 5259 6.968263 TTCACATAACCAAAACCTCATTGA 57.032 33.333 0.00 0.00 0.00 2.57
4753 5260 6.968263 TCACATAACCAAAACCTCATTGAA 57.032 33.333 0.00 0.00 0.00 2.69
4754 5261 6.980593 TCACATAACCAAAACCTCATTGAAG 58.019 36.000 0.00 0.00 0.00 3.02
4755 5262 6.549364 TCACATAACCAAAACCTCATTGAAGT 59.451 34.615 0.00 0.00 0.00 3.01
4756 5263 7.721842 TCACATAACCAAAACCTCATTGAAGTA 59.278 33.333 0.00 0.00 0.00 2.24
4757 5264 8.522830 CACATAACCAAAACCTCATTGAAGTAT 58.477 33.333 0.00 0.00 0.00 2.12
4758 5265 9.088987 ACATAACCAAAACCTCATTGAAGTATT 57.911 29.630 0.00 0.00 0.00 1.89
4759 5266 9.357652 CATAACCAAAACCTCATTGAAGTATTG 57.642 33.333 0.00 0.00 0.00 1.90
4760 5267 5.783111 ACCAAAACCTCATTGAAGTATTGC 58.217 37.500 0.00 0.00 0.00 3.56
4761 5268 5.304101 ACCAAAACCTCATTGAAGTATTGCA 59.696 36.000 0.00 0.00 0.00 4.08
4762 5269 6.183360 ACCAAAACCTCATTGAAGTATTGCAA 60.183 34.615 0.00 0.00 0.00 4.08
4763 5270 6.705381 CCAAAACCTCATTGAAGTATTGCAAA 59.295 34.615 1.71 0.00 0.00 3.68
4764 5271 7.226325 CCAAAACCTCATTGAAGTATTGCAAAA 59.774 33.333 1.71 0.00 0.00 2.44
4765 5272 7.713764 AAACCTCATTGAAGTATTGCAAAAC 57.286 32.000 1.71 0.00 0.00 2.43
4766 5273 6.403866 ACCTCATTGAAGTATTGCAAAACA 57.596 33.333 1.71 0.00 0.00 2.83
4767 5274 6.996509 ACCTCATTGAAGTATTGCAAAACAT 58.003 32.000 1.71 0.00 0.00 2.71
4768 5275 7.444299 ACCTCATTGAAGTATTGCAAAACATT 58.556 30.769 1.71 0.00 0.00 2.71
4769 5276 7.599998 ACCTCATTGAAGTATTGCAAAACATTC 59.400 33.333 1.71 6.66 0.00 2.67
4770 5277 7.063780 CCTCATTGAAGTATTGCAAAACATTCC 59.936 37.037 1.71 0.00 0.00 3.01
4771 5278 6.873076 TCATTGAAGTATTGCAAAACATTCCC 59.127 34.615 1.71 0.00 0.00 3.97
4772 5279 4.804108 TGAAGTATTGCAAAACATTCCCG 58.196 39.130 1.71 0.00 0.00 5.14
4773 5280 3.230743 AGTATTGCAAAACATTCCCGC 57.769 42.857 1.71 0.00 0.00 6.13
4774 5281 2.560542 AGTATTGCAAAACATTCCCGCA 59.439 40.909 1.71 0.00 0.00 5.69
4775 5282 2.540265 ATTGCAAAACATTCCCGCAA 57.460 40.000 1.71 0.00 45.70 4.85
4776 5283 1.576356 TTGCAAAACATTCCCGCAAC 58.424 45.000 0.00 0.00 37.64 4.17
4777 5284 0.461548 TGCAAAACATTCCCGCAACA 59.538 45.000 0.00 0.00 0.00 3.33
4778 5285 1.134699 TGCAAAACATTCCCGCAACAA 60.135 42.857 0.00 0.00 0.00 2.83
4779 5286 1.260297 GCAAAACATTCCCGCAACAAC 59.740 47.619 0.00 0.00 0.00 3.32
4780 5287 1.520590 CAAAACATTCCCGCAACAACG 59.479 47.619 0.00 0.00 0.00 4.10
4781 5288 0.741915 AAACATTCCCGCAACAACGT 59.258 45.000 0.00 0.00 0.00 3.99
4782 5289 0.030101 AACATTCCCGCAACAACGTG 59.970 50.000 0.00 0.00 0.00 4.49
4783 5290 1.729131 CATTCCCGCAACAACGTGC 60.729 57.895 0.00 0.00 41.32 5.34
4802 5309 2.783828 CGGAGCGTCATCTAGTTCAT 57.216 50.000 0.00 0.00 0.00 2.57
4803 5310 3.898517 CGGAGCGTCATCTAGTTCATA 57.101 47.619 0.00 0.00 0.00 2.15
4804 5311 3.816091 CGGAGCGTCATCTAGTTCATAG 58.184 50.000 0.00 0.00 0.00 2.23
4820 5327 6.456501 AGTTCATAGAGTGACCAAGTACAAC 58.543 40.000 0.00 0.00 36.32 3.32
4825 5332 4.215908 AGAGTGACCAAGTACAACTCTCA 58.784 43.478 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.681978 ACGAGCTCCGGGTTGCAC 62.682 66.667 8.47 1.90 43.93 4.57
55 56 2.476345 CGTTTTTGTCAACGGCGAC 58.524 52.632 16.62 1.03 44.75 5.19
101 104 2.815298 CTCTCTCTCGTCGCCGTCC 61.815 68.421 0.00 0.00 35.01 4.79
148 152 3.060003 CGAATAAATGAGGCGAGCTTGAG 60.060 47.826 4.70 0.00 0.00 3.02
184 199 2.938086 ATCACGCCACACCGTAGCA 61.938 57.895 0.00 0.00 39.83 3.49
185 200 2.125673 ATCACGCCACACCGTAGC 60.126 61.111 0.00 0.00 39.83 3.58
186 201 1.076533 GACATCACGCCACACCGTAG 61.077 60.000 0.00 0.00 39.83 3.51
187 202 1.080366 GACATCACGCCACACCGTA 60.080 57.895 0.00 0.00 39.83 4.02
188 203 2.357034 GACATCACGCCACACCGT 60.357 61.111 0.00 0.00 43.11 4.83
268 294 0.789383 CGACCCGTTCACGTACGTAC 60.789 60.000 22.34 15.69 39.81 3.67
269 295 1.495509 CGACCCGTTCACGTACGTA 59.504 57.895 22.34 3.16 39.81 3.57
270 296 2.252260 CGACCCGTTCACGTACGT 59.748 61.111 16.72 16.72 39.81 3.57
353 383 1.070289 GAAAACGGAGTGAGGTGGAGT 59.930 52.381 0.00 0.00 45.00 3.85
354 384 1.344763 AGAAAACGGAGTGAGGTGGAG 59.655 52.381 0.00 0.00 45.00 3.86
355 385 1.343465 GAGAAAACGGAGTGAGGTGGA 59.657 52.381 0.00 0.00 45.00 4.02
356 386 1.070134 TGAGAAAACGGAGTGAGGTGG 59.930 52.381 0.00 0.00 45.00 4.61
357 387 2.135933 GTGAGAAAACGGAGTGAGGTG 58.864 52.381 0.00 0.00 45.00 4.00
377 407 1.555533 GGTCTGTACTCCAAGAAGGGG 59.444 57.143 0.00 0.00 46.61 4.79
417 459 3.819877 AACCCGGTCAGTGCGGAAC 62.820 63.158 10.40 0.00 0.00 3.62
430 472 1.298788 GCGTTGTTTGGTCAACCCG 60.299 57.895 0.00 0.00 43.02 5.28
439 481 2.952291 AAGCCAAGCCGCGTTGTTTG 62.952 55.000 4.92 5.12 0.00 2.93
454 496 1.881903 GAAGGGAAGCAAGCCAAGCC 61.882 60.000 0.00 0.00 0.00 4.35
455 497 1.588597 GAAGGGAAGCAAGCCAAGC 59.411 57.895 0.00 0.00 0.00 4.01
456 498 1.589716 CGGAAGGGAAGCAAGCCAAG 61.590 60.000 0.00 0.00 0.00 3.61
457 499 1.603455 CGGAAGGGAAGCAAGCCAA 60.603 57.895 0.00 0.00 0.00 4.52
458 500 2.034066 CGGAAGGGAAGCAAGCCA 59.966 61.111 0.00 0.00 0.00 4.75
459 501 2.034221 ACGGAAGGGAAGCAAGCC 59.966 61.111 0.00 0.00 0.00 4.35
460 502 2.982744 GCACGGAAGGGAAGCAAGC 61.983 63.158 0.00 0.00 35.60 4.01
461 503 2.680913 CGCACGGAAGGGAAGCAAG 61.681 63.158 0.00 0.00 35.60 4.01
462 504 2.668212 CGCACGGAAGGGAAGCAA 60.668 61.111 0.00 0.00 35.60 3.91
463 505 3.936203 ACGCACGGAAGGGAAGCA 61.936 61.111 0.00 0.00 35.60 3.91
464 506 3.423154 CACGCACGGAAGGGAAGC 61.423 66.667 0.00 0.00 35.60 3.86
465 507 2.742372 CCACGCACGGAAGGGAAG 60.742 66.667 0.00 0.00 35.60 3.46
466 508 3.234630 CTCCACGCACGGAAGGGAA 62.235 63.158 0.00 0.00 35.60 3.97
467 509 3.691342 CTCCACGCACGGAAGGGA 61.691 66.667 0.00 0.00 35.60 4.20
468 510 4.760047 CCTCCACGCACGGAAGGG 62.760 72.222 0.00 0.00 33.65 3.95
469 511 4.760047 CCCTCCACGCACGGAAGG 62.760 72.222 0.00 0.00 33.65 3.46
470 512 4.003788 ACCCTCCACGCACGGAAG 62.004 66.667 0.00 0.00 33.65 3.46
471 513 4.308458 CACCCTCCACGCACGGAA 62.308 66.667 0.00 0.00 33.65 4.30
482 524 3.860930 TTTGCTTCGGGCCACCCTC 62.861 63.158 4.39 0.00 42.67 4.30
484 526 3.373565 CTTTGCTTCGGGCCACCC 61.374 66.667 4.39 0.00 41.09 4.61
487 529 1.816224 GTTTATCTTTGCTTCGGGCCA 59.184 47.619 4.39 0.00 40.92 5.36
517 559 1.535462 AGATCTGCGTTTGTTTTCGGG 59.465 47.619 0.00 0.00 0.00 5.14
518 560 2.969443 AGATCTGCGTTTGTTTTCGG 57.031 45.000 0.00 0.00 0.00 4.30
533 575 6.422776 TTTCCGAGCACAAAATCTTAGATC 57.577 37.500 0.00 0.00 0.00 2.75
613 774 3.821033 AGGAAAAGTGAAGGAAACGGATG 59.179 43.478 0.00 0.00 0.00 3.51
683 894 2.183300 GCGGTGATCGTGCTGGTA 59.817 61.111 0.00 0.00 41.72 3.25
818 1049 4.907034 CGATCGAGTGGCGTCCGG 62.907 72.222 10.26 0.00 41.80 5.14
822 1053 4.538283 CGAGCGATCGAGTGGCGT 62.538 66.667 20.02 0.00 41.80 5.68
824 1055 4.560856 AGCGAGCGATCGAGTGGC 62.561 66.667 29.29 17.20 34.64 5.01
825 1056 2.352915 GAGCGAGCGATCGAGTGG 60.353 66.667 29.29 7.43 34.64 4.00
840 1079 2.985282 TTGGCTTTGGCTGGCGAG 60.985 61.111 0.00 0.00 38.73 5.03
845 1084 4.705519 CGGCGTTGGCTTTGGCTG 62.706 66.667 0.00 0.00 39.81 4.85
846 1085 4.947147 TCGGCGTTGGCTTTGGCT 62.947 61.111 6.85 0.00 39.81 4.75
851 1090 2.750237 GGGATTCGGCGTTGGCTT 60.750 61.111 6.85 0.00 39.81 4.35
950 1189 2.690653 TTATATGCGCTGGGTGGGGC 62.691 60.000 9.73 0.00 43.92 5.80
952 1191 1.909700 ATTTATATGCGCTGGGTGGG 58.090 50.000 9.73 0.00 0.00 4.61
954 1193 6.403636 GGAGAAATATTTATATGCGCTGGGTG 60.404 42.308 9.73 0.00 0.00 4.61
955 1194 5.648092 GGAGAAATATTTATATGCGCTGGGT 59.352 40.000 9.73 0.00 0.00 4.51
982 1230 4.837053 TAAAACGATGCGCGCGCG 62.837 61.111 45.73 45.73 46.04 6.86
1080 1334 2.903357 GATGGAAGCGAGGAGGCA 59.097 61.111 0.00 0.00 34.64 4.75
1105 1359 4.664188 CGGCTCTTCTTCTTGTAGTACTC 58.336 47.826 0.00 0.00 0.00 2.59
1106 1360 3.119424 GCGGCTCTTCTTCTTGTAGTACT 60.119 47.826 0.00 0.00 0.00 2.73
1107 1361 3.180613 GCGGCTCTTCTTCTTGTAGTAC 58.819 50.000 0.00 0.00 0.00 2.73
1108 1362 2.823747 TGCGGCTCTTCTTCTTGTAGTA 59.176 45.455 0.00 0.00 0.00 1.82
1109 1363 1.618837 TGCGGCTCTTCTTCTTGTAGT 59.381 47.619 0.00 0.00 0.00 2.73
1203 1472 1.977293 GAGCCGCCTCTCCTCCAAAT 61.977 60.000 0.00 0.00 35.16 2.32
1263 1540 2.920912 ACTTTCCCTCGGCGTCCA 60.921 61.111 6.85 0.00 0.00 4.02
1266 1543 4.016706 CCCACTTTCCCTCGGCGT 62.017 66.667 6.85 0.00 0.00 5.68
1267 1544 3.665675 CTCCCACTTTCCCTCGGCG 62.666 68.421 0.00 0.00 0.00 6.46
1268 1545 1.627297 ATCTCCCACTTTCCCTCGGC 61.627 60.000 0.00 0.00 0.00 5.54
1269 1546 0.912486 AATCTCCCACTTTCCCTCGG 59.088 55.000 0.00 0.00 0.00 4.63
1270 1547 2.749621 CAAAATCTCCCACTTTCCCTCG 59.250 50.000 0.00 0.00 0.00 4.63
1271 1548 2.493675 GCAAAATCTCCCACTTTCCCTC 59.506 50.000 0.00 0.00 0.00 4.30
1272 1549 2.529632 GCAAAATCTCCCACTTTCCCT 58.470 47.619 0.00 0.00 0.00 4.20
1292 1595 4.988598 AAGCGCACCCACTCACCG 62.989 66.667 11.47 0.00 0.00 4.94
1336 1639 2.613223 CGGAAAGGAGGAAGAACAGGAC 60.613 54.545 0.00 0.00 0.00 3.85
1398 1701 6.775088 TGACAGATGAAAGCATAAAATCGTC 58.225 36.000 0.00 0.00 34.11 4.20
1415 1718 2.434884 CGGCCTGCGTTGACAGAT 60.435 61.111 0.00 0.00 40.25 2.90
1431 1734 3.000222 TCACTCGATCAATCAAATTCGCG 60.000 43.478 0.00 0.00 0.00 5.87
1436 1739 5.670149 GAGCATCACTCGATCAATCAAAT 57.330 39.130 0.00 0.00 35.18 2.32
1468 1818 1.663074 GAGATCGCCATGAGCCGAC 60.663 63.158 0.00 0.00 38.78 4.79
1608 1964 0.460987 CAATCACCGGAGTGGAGCTC 60.461 60.000 9.46 4.71 44.64 4.09
1609 1965 1.599047 CAATCACCGGAGTGGAGCT 59.401 57.895 9.46 0.00 44.64 4.09
1615 1971 1.137086 CGAAGATCCAATCACCGGAGT 59.863 52.381 9.46 0.00 35.56 3.85
1655 2027 2.097466 CGAAATCCAATCAGAAACCCGG 59.903 50.000 0.00 0.00 0.00 5.73
1681 2053 2.427410 GTTTCGCTGCGCAACCAG 60.427 61.111 23.46 0.00 35.93 4.00
1820 2192 3.044305 GTCGTGCCACTGGTGCTC 61.044 66.667 0.00 0.00 0.00 4.26
1841 2243 4.056125 CTGGTGCTCGGAGCGTCA 62.056 66.667 23.72 21.09 46.26 4.35
1940 2342 1.446272 CTTCCTCTCAACGACCGGC 60.446 63.158 0.00 0.00 0.00 6.13
2060 2498 1.444553 GACACTCGCTGAAGACGGG 60.445 63.158 0.00 0.00 36.95 5.28
2248 2686 3.050275 GCTTCCTCGCTGGCGTTT 61.050 61.111 14.55 0.00 40.74 3.60
2249 2687 3.612247 ATGCTTCCTCGCTGGCGTT 62.612 57.895 14.55 0.00 40.74 4.84
2397 2835 4.700365 GAAGTTTGCACCGGCGGC 62.700 66.667 28.71 14.14 45.35 6.53
2398 2836 4.383602 CGAAGTTTGCACCGGCGG 62.384 66.667 27.06 27.06 45.35 6.13
2440 2878 3.190849 CAGGCTCGGCATCACGTG 61.191 66.667 9.94 9.94 34.94 4.49
2447 2885 0.674581 CATCAGTTTCAGGCTCGGCA 60.675 55.000 0.00 0.00 0.00 5.69
2465 2903 0.949105 GACTTTTCTTCCTCGCGGCA 60.949 55.000 6.13 0.00 0.00 5.69
2489 2933 3.808656 GCTTCCGCTCTGCTTGGC 61.809 66.667 0.00 0.00 0.00 4.52
2510 2963 4.619140 GCGCGATCAGGCATTGGC 62.619 66.667 12.10 1.17 40.13 4.52
2566 3019 2.507102 CGGCATCGTCTCGCTGTT 60.507 61.111 0.00 0.00 0.00 3.16
2607 3060 2.032071 CGGTGCCTTTTCCTCCGT 59.968 61.111 0.00 0.00 36.99 4.69
2696 3165 2.970639 TCGGAGAGGTCGCCTTTG 59.029 61.111 0.00 0.00 31.76 2.77
3071 3555 4.767255 CGCTTCTTGGCCTCCGCT 62.767 66.667 3.32 0.00 34.44 5.52
3641 4130 3.785859 TCCTCCACGCAGATGCCC 61.786 66.667 0.00 0.00 37.91 5.36
3656 4145 3.966026 CTCGTCGCCGGTGAAGTCC 62.966 68.421 26.58 11.51 33.95 3.85
3704 4193 1.202313 CCAGATCTTCTCCCGTTCGAC 60.202 57.143 0.00 0.00 0.00 4.20
3815 4311 3.075148 GGCCTGAACTGAAACTACCTTC 58.925 50.000 0.00 0.00 0.00 3.46
3819 4315 2.749621 CCATGGCCTGAACTGAAACTAC 59.250 50.000 3.32 0.00 0.00 2.73
3836 4332 6.919662 CCGAAAAATACCATCAGAATTCCATG 59.080 38.462 0.65 5.00 0.00 3.66
3860 4356 2.952310 GCCTATCAGAATTCCAACACCC 59.048 50.000 0.65 0.00 0.00 4.61
3880 4376 5.886960 ATCTAAACAACAATCCACTCTGC 57.113 39.130 0.00 0.00 0.00 4.26
3888 4384 7.863877 ACCAAACGGTAAATCTAAACAACAATC 59.136 33.333 0.00 0.00 33.92 2.67
3908 4404 3.506067 CCACCTCACCAATCTAACCAAAC 59.494 47.826 0.00 0.00 0.00 2.93
3920 4416 1.993701 ATGTGCACACCACCTCACCA 61.994 55.000 24.37 0.00 44.01 4.17
3982 4478 7.328277 ACATTGAGAGACTGAGTATCTACAC 57.672 40.000 10.05 0.00 34.07 2.90
4006 4502 5.726308 TCTTCCCTTATCCTGAGAATCACAA 59.274 40.000 0.00 0.00 42.56 3.33
4016 4512 4.082845 TCGCTAGATCTTCCCTTATCCTG 58.917 47.826 0.00 0.00 0.00 3.86
4030 4526 3.572255 GGACCTGAAGATCTTCGCTAGAT 59.428 47.826 26.32 9.16 46.41 1.98
4031 4527 2.952978 GGACCTGAAGATCTTCGCTAGA 59.047 50.000 26.32 10.86 42.28 2.43
4032 4528 2.955660 AGGACCTGAAGATCTTCGCTAG 59.044 50.000 26.32 18.99 42.28 3.42
4033 4529 3.019799 AGGACCTGAAGATCTTCGCTA 57.980 47.619 26.32 11.53 42.28 4.26
4034 4530 1.859302 AGGACCTGAAGATCTTCGCT 58.141 50.000 26.32 13.54 42.28 4.93
4035 4531 2.682155 AAGGACCTGAAGATCTTCGC 57.318 50.000 26.32 16.59 42.28 4.70
4036 4532 4.081972 TCAGAAAGGACCTGAAGATCTTCG 60.082 45.833 26.32 20.61 42.28 3.79
4101 4597 9.891828 CAAACATTCAGCTAGTTAATGTAACAA 57.108 29.630 15.31 0.00 41.67 2.83
4106 4602 9.284968 ACTTACAAACATTCAGCTAGTTAATGT 57.715 29.630 11.39 11.39 43.74 2.71
4125 4628 0.763652 TACCCCGTGGCAACTTACAA 59.236 50.000 0.00 0.00 33.59 2.41
4130 4633 1.072505 CTGTTACCCCGTGGCAACT 59.927 57.895 1.59 0.00 38.52 3.16
4166 4669 7.967303 ACAAACGTTTTCAAATTAAACCTCGTA 59.033 29.630 11.66 0.00 33.07 3.43
4169 4672 8.648968 TCAACAAACGTTTTCAAATTAAACCTC 58.351 29.630 11.66 0.00 33.07 3.85
4229 4736 9.883142 GAGAAATATGTTAATGAGGCTAGCTAT 57.117 33.333 15.72 3.39 0.00 2.97
4230 4737 9.094578 AGAGAAATATGTTAATGAGGCTAGCTA 57.905 33.333 15.72 1.83 0.00 3.32
4231 4738 7.972301 AGAGAAATATGTTAATGAGGCTAGCT 58.028 34.615 15.72 0.00 0.00 3.32
4232 4739 7.875041 TGAGAGAAATATGTTAATGAGGCTAGC 59.125 37.037 6.04 6.04 0.00 3.42
4233 4740 9.770097 TTGAGAGAAATATGTTAATGAGGCTAG 57.230 33.333 0.00 0.00 0.00 3.42
4234 4741 9.547753 GTTGAGAGAAATATGTTAATGAGGCTA 57.452 33.333 0.00 0.00 0.00 3.93
4235 4742 8.049117 TGTTGAGAGAAATATGTTAATGAGGCT 58.951 33.333 0.00 0.00 0.00 4.58
4236 4743 8.213518 TGTTGAGAGAAATATGTTAATGAGGC 57.786 34.615 0.00 0.00 0.00 4.70
4238 4745 9.661187 GCATGTTGAGAGAAATATGTTAATGAG 57.339 33.333 0.00 0.00 32.83 2.90
4239 4746 9.176460 TGCATGTTGAGAGAAATATGTTAATGA 57.824 29.630 0.00 0.00 32.83 2.57
4240 4747 9.791820 TTGCATGTTGAGAGAAATATGTTAATG 57.208 29.630 0.00 0.00 32.83 1.90
4242 4749 7.970061 GCTTGCATGTTGAGAGAAATATGTTAA 59.030 33.333 1.14 0.00 32.83 2.01
4243 4750 7.121020 TGCTTGCATGTTGAGAGAAATATGTTA 59.879 33.333 1.14 0.00 32.83 2.41
4244 4751 6.071784 TGCTTGCATGTTGAGAGAAATATGTT 60.072 34.615 1.14 0.00 32.83 2.71
4245 4752 5.416639 TGCTTGCATGTTGAGAGAAATATGT 59.583 36.000 1.14 0.00 32.83 2.29
4246 4753 5.886992 TGCTTGCATGTTGAGAGAAATATG 58.113 37.500 1.14 0.00 33.25 1.78
4247 4754 6.320418 TCATGCTTGCATGTTGAGAGAAATAT 59.680 34.615 27.80 0.00 34.39 1.28
4248 4755 5.648960 TCATGCTTGCATGTTGAGAGAAATA 59.351 36.000 27.80 7.94 34.39 1.40
4249 4756 4.461431 TCATGCTTGCATGTTGAGAGAAAT 59.539 37.500 27.80 0.00 34.39 2.17
4250 4757 3.822167 TCATGCTTGCATGTTGAGAGAAA 59.178 39.130 27.80 8.99 34.39 2.52
4251 4758 3.189910 GTCATGCTTGCATGTTGAGAGAA 59.810 43.478 27.80 9.59 34.39 2.87
4252 4759 2.745821 GTCATGCTTGCATGTTGAGAGA 59.254 45.455 27.80 10.21 34.39 3.10
4253 4760 2.486592 TGTCATGCTTGCATGTTGAGAG 59.513 45.455 27.80 7.73 34.39 3.20
4254 4761 2.227149 GTGTCATGCTTGCATGTTGAGA 59.773 45.455 27.80 11.67 34.39 3.27
4255 4762 2.592194 GTGTCATGCTTGCATGTTGAG 58.408 47.619 27.80 8.97 34.39 3.02
4256 4763 1.270274 GGTGTCATGCTTGCATGTTGA 59.730 47.619 27.80 12.95 34.39 3.18
4257 4764 1.271379 AGGTGTCATGCTTGCATGTTG 59.729 47.619 27.80 11.01 34.39 3.33
4258 4765 1.542915 GAGGTGTCATGCTTGCATGTT 59.457 47.619 27.80 13.97 34.39 2.71
4259 4766 1.171308 GAGGTGTCATGCTTGCATGT 58.829 50.000 27.80 13.61 34.39 3.21
4260 4767 1.170442 TGAGGTGTCATGCTTGCATG 58.830 50.000 24.70 24.70 0.00 4.06
4261 4768 2.022195 GATGAGGTGTCATGCTTGCAT 58.978 47.619 1.81 1.81 43.92 3.96
4262 4769 1.271488 TGATGAGGTGTCATGCTTGCA 60.271 47.619 0.00 0.00 43.92 4.08
4263 4770 1.456296 TGATGAGGTGTCATGCTTGC 58.544 50.000 0.00 0.00 43.92 4.01
4264 4771 3.692593 TGAATGATGAGGTGTCATGCTTG 59.307 43.478 0.00 0.00 43.92 4.01
4265 4772 3.959293 TGAATGATGAGGTGTCATGCTT 58.041 40.909 0.00 0.00 43.92 3.91
4266 4773 3.639672 TGAATGATGAGGTGTCATGCT 57.360 42.857 0.00 0.00 43.92 3.79
4267 4774 3.441222 TGTTGAATGATGAGGTGTCATGC 59.559 43.478 0.00 0.00 43.92 4.06
4268 4775 5.578776 CATGTTGAATGATGAGGTGTCATG 58.421 41.667 0.00 0.00 43.92 3.07
4269 4776 4.097437 GCATGTTGAATGATGAGGTGTCAT 59.903 41.667 0.00 0.00 46.75 3.06
4270 4777 3.441222 GCATGTTGAATGATGAGGTGTCA 59.559 43.478 0.00 0.00 37.02 3.58
4271 4778 3.441222 TGCATGTTGAATGATGAGGTGTC 59.559 43.478 0.00 0.00 0.00 3.67
4272 4779 3.423749 TGCATGTTGAATGATGAGGTGT 58.576 40.909 0.00 0.00 0.00 4.16
4273 4780 4.649088 ATGCATGTTGAATGATGAGGTG 57.351 40.909 0.00 0.00 0.00 4.00
4274 4781 5.687780 TCTATGCATGTTGAATGATGAGGT 58.312 37.500 10.16 0.00 0.00 3.85
4275 4782 6.628919 TTCTATGCATGTTGAATGATGAGG 57.371 37.500 10.16 0.00 0.00 3.86
4276 4783 7.648112 CCTTTTCTATGCATGTTGAATGATGAG 59.352 37.037 10.16 0.00 0.00 2.90
4277 4784 7.485810 CCTTTTCTATGCATGTTGAATGATGA 58.514 34.615 10.16 0.00 0.00 2.92
4278 4785 6.200286 GCCTTTTCTATGCATGTTGAATGATG 59.800 38.462 10.16 2.78 0.00 3.07
4279 4786 6.278363 GCCTTTTCTATGCATGTTGAATGAT 58.722 36.000 10.16 0.00 0.00 2.45
4280 4787 5.394443 GGCCTTTTCTATGCATGTTGAATGA 60.394 40.000 10.16 3.23 0.00 2.57
4281 4788 4.807304 GGCCTTTTCTATGCATGTTGAATG 59.193 41.667 10.16 7.26 0.00 2.67
4282 4789 4.141869 GGGCCTTTTCTATGCATGTTGAAT 60.142 41.667 10.16 0.00 0.00 2.57
4283 4790 3.195396 GGGCCTTTTCTATGCATGTTGAA 59.805 43.478 10.16 8.36 0.00 2.69
4284 4791 2.760092 GGGCCTTTTCTATGCATGTTGA 59.240 45.455 10.16 2.00 0.00 3.18
4285 4792 2.496871 TGGGCCTTTTCTATGCATGTTG 59.503 45.455 10.16 0.00 0.00 3.33
4286 4793 2.497273 GTGGGCCTTTTCTATGCATGTT 59.503 45.455 10.16 0.00 0.00 2.71
4287 4794 2.102578 GTGGGCCTTTTCTATGCATGT 58.897 47.619 10.16 0.00 0.00 3.21
4288 4795 1.410153 GGTGGGCCTTTTCTATGCATG 59.590 52.381 10.16 0.00 0.00 4.06
4289 4796 1.288932 AGGTGGGCCTTTTCTATGCAT 59.711 47.619 4.53 3.79 44.18 3.96
4290 4797 0.704076 AGGTGGGCCTTTTCTATGCA 59.296 50.000 4.53 0.00 44.18 3.96
4291 4798 3.596362 AGGTGGGCCTTTTCTATGC 57.404 52.632 4.53 0.00 44.18 3.14
4301 4808 1.907807 TTGCATGTTGAGGTGGGCC 60.908 57.895 0.00 0.00 0.00 5.80
4302 4809 1.181098 AGTTGCATGTTGAGGTGGGC 61.181 55.000 0.00 0.00 0.00 5.36
4303 4810 2.198827 TAGTTGCATGTTGAGGTGGG 57.801 50.000 0.00 0.00 0.00 4.61
4304 4811 2.424601 CCATAGTTGCATGTTGAGGTGG 59.575 50.000 0.00 0.00 0.00 4.61
4305 4812 3.346315 TCCATAGTTGCATGTTGAGGTG 58.654 45.455 0.00 0.00 0.00 4.00
4306 4813 3.719268 TCCATAGTTGCATGTTGAGGT 57.281 42.857 0.00 0.00 0.00 3.85
4307 4814 6.889301 AATATCCATAGTTGCATGTTGAGG 57.111 37.500 0.00 0.00 0.00 3.86
4324 4831 9.034544 GCATGTTGAAGTGGATTTTTAATATCC 57.965 33.333 7.36 7.36 41.63 2.59
4325 4832 9.585099 TGCATGTTGAAGTGGATTTTTAATATC 57.415 29.630 0.00 0.00 0.00 1.63
4326 4833 9.941325 TTGCATGTTGAAGTGGATTTTTAATAT 57.059 25.926 0.00 0.00 0.00 1.28
4327 4834 9.770097 TTTGCATGTTGAAGTGGATTTTTAATA 57.230 25.926 0.00 0.00 0.00 0.98
4328 4835 8.558700 GTTTGCATGTTGAAGTGGATTTTTAAT 58.441 29.630 0.00 0.00 0.00 1.40
4329 4836 7.550551 TGTTTGCATGTTGAAGTGGATTTTTAA 59.449 29.630 0.00 0.00 0.00 1.52
4330 4837 7.044181 TGTTTGCATGTTGAAGTGGATTTTTA 58.956 30.769 0.00 0.00 0.00 1.52
4331 4838 5.879223 TGTTTGCATGTTGAAGTGGATTTTT 59.121 32.000 0.00 0.00 0.00 1.94
4332 4839 5.426504 TGTTTGCATGTTGAAGTGGATTTT 58.573 33.333 0.00 0.00 0.00 1.82
4333 4840 5.021033 TGTTTGCATGTTGAAGTGGATTT 57.979 34.783 0.00 0.00 0.00 2.17
4334 4841 4.669206 TGTTTGCATGTTGAAGTGGATT 57.331 36.364 0.00 0.00 0.00 3.01
4335 4842 4.562082 CATGTTTGCATGTTGAAGTGGAT 58.438 39.130 0.00 0.00 45.48 3.41
4336 4843 3.979948 CATGTTTGCATGTTGAAGTGGA 58.020 40.909 0.00 0.00 45.48 4.02
4355 4862 5.680619 AGAATGGATTTTTCATGCATGCAT 58.319 33.333 27.46 27.46 37.08 3.96
4356 4863 5.092554 AGAATGGATTTTTCATGCATGCA 57.907 34.783 25.04 25.04 28.85 3.96
4357 4864 7.724305 AATAGAATGGATTTTTCATGCATGC 57.276 32.000 22.25 11.82 30.44 4.06
4446 4953 9.456147 TGCAGTATTTTAGTAAGATTTTGGCTA 57.544 29.630 0.00 0.00 0.00 3.93
4447 4954 8.348285 TGCAGTATTTTAGTAAGATTTTGGCT 57.652 30.769 0.00 0.00 0.00 4.75
4448 4955 8.980143 TTGCAGTATTTTAGTAAGATTTTGGC 57.020 30.769 0.00 0.00 0.00 4.52
4459 4966 9.586435 GCAGGAATATTTTTGCAGTATTTTAGT 57.414 29.630 15.99 0.00 36.59 2.24
4460 4967 9.585099 TGCAGGAATATTTTTGCAGTATTTTAG 57.415 29.630 18.38 0.00 41.23 1.85
4461 4968 9.935241 TTGCAGGAATATTTTTGCAGTATTTTA 57.065 25.926 20.19 7.94 46.02 1.52
4462 4969 8.845413 TTGCAGGAATATTTTTGCAGTATTTT 57.155 26.923 20.19 0.00 46.02 1.82
4465 4972 9.533253 GTTATTGCAGGAATATTTTTGCAGTAT 57.467 29.630 20.54 16.66 46.02 2.12
4466 4973 7.700234 CGTTATTGCAGGAATATTTTTGCAGTA 59.300 33.333 20.19 19.11 46.02 2.74
4467 4974 6.531240 CGTTATTGCAGGAATATTTTTGCAGT 59.469 34.615 20.19 19.82 46.02 4.40
4468 4975 6.531240 ACGTTATTGCAGGAATATTTTTGCAG 59.469 34.615 20.19 14.11 46.02 4.41
4469 4976 6.393990 ACGTTATTGCAGGAATATTTTTGCA 58.606 32.000 18.38 18.38 44.09 4.08
4470 4977 6.751888 AGACGTTATTGCAGGAATATTTTTGC 59.248 34.615 14.69 14.69 37.09 3.68
4471 4978 7.220683 CCAGACGTTATTGCAGGAATATTTTTG 59.779 37.037 0.00 0.00 0.00 2.44
4472 4979 7.257722 CCAGACGTTATTGCAGGAATATTTTT 58.742 34.615 0.00 0.00 0.00 1.94
4473 4980 6.183360 CCCAGACGTTATTGCAGGAATATTTT 60.183 38.462 0.00 0.00 0.00 1.82
4474 4981 5.299279 CCCAGACGTTATTGCAGGAATATTT 59.701 40.000 0.00 0.00 0.00 1.40
4475 4982 4.821805 CCCAGACGTTATTGCAGGAATATT 59.178 41.667 0.00 0.00 0.00 1.28
4476 4983 4.389374 CCCAGACGTTATTGCAGGAATAT 58.611 43.478 0.00 0.00 0.00 1.28
4477 4984 3.433031 CCCCAGACGTTATTGCAGGAATA 60.433 47.826 0.00 0.00 0.00 1.75
4478 4985 2.643551 CCCAGACGTTATTGCAGGAAT 58.356 47.619 0.00 0.00 0.00 3.01
4479 4986 1.339631 CCCCAGACGTTATTGCAGGAA 60.340 52.381 0.00 0.00 0.00 3.36
4480 4987 0.251916 CCCCAGACGTTATTGCAGGA 59.748 55.000 0.00 0.00 0.00 3.86
4481 4988 1.376609 GCCCCAGACGTTATTGCAGG 61.377 60.000 0.00 0.00 0.00 4.85
4482 4989 0.676466 TGCCCCAGACGTTATTGCAG 60.676 55.000 0.00 0.00 0.00 4.41
4483 4990 0.034574 ATGCCCCAGACGTTATTGCA 60.035 50.000 0.00 0.00 0.00 4.08
4484 4991 0.663153 GATGCCCCAGACGTTATTGC 59.337 55.000 0.00 0.00 0.00 3.56
4485 4992 2.036958 TGATGCCCCAGACGTTATTG 57.963 50.000 0.00 0.00 0.00 1.90
4486 4993 2.439507 AGATGATGCCCCAGACGTTATT 59.560 45.455 0.00 0.00 0.00 1.40
4487 4994 2.050144 AGATGATGCCCCAGACGTTAT 58.950 47.619 0.00 0.00 0.00 1.89
4488 4995 1.496060 AGATGATGCCCCAGACGTTA 58.504 50.000 0.00 0.00 0.00 3.18
4489 4996 1.414181 CTAGATGATGCCCCAGACGTT 59.586 52.381 0.00 0.00 0.00 3.99
4490 4997 1.043816 CTAGATGATGCCCCAGACGT 58.956 55.000 0.00 0.00 0.00 4.34
4491 4998 1.043816 ACTAGATGATGCCCCAGACG 58.956 55.000 0.00 0.00 0.00 4.18
4492 4999 4.899352 AATACTAGATGATGCCCCAGAC 57.101 45.455 0.00 0.00 0.00 3.51
4493 5000 7.387265 TTTAAATACTAGATGATGCCCCAGA 57.613 36.000 0.00 0.00 0.00 3.86
4494 5001 9.388506 CTATTTAAATACTAGATGATGCCCCAG 57.611 37.037 3.71 0.00 0.00 4.45
4495 5002 8.890472 ACTATTTAAATACTAGATGATGCCCCA 58.110 33.333 3.71 0.00 0.00 4.96
4496 5003 9.740710 AACTATTTAAATACTAGATGATGCCCC 57.259 33.333 3.71 0.00 0.00 5.80
4503 5010 9.668497 GGGGGCTAACTATTTAAATACTAGATG 57.332 37.037 16.81 6.23 0.00 2.90
4504 5011 9.401496 TGGGGGCTAACTATTTAAATACTAGAT 57.599 33.333 16.81 4.87 0.00 1.98
4505 5012 8.802057 TGGGGGCTAACTATTTAAATACTAGA 57.198 34.615 16.81 0.00 0.00 2.43
4519 5026 9.128715 AGAGAAATATATTAATGGGGGCTAACT 57.871 33.333 0.00 0.00 0.00 2.24
4520 5027 9.397280 GAGAGAAATATATTAATGGGGGCTAAC 57.603 37.037 0.00 0.00 0.00 2.34
4521 5028 9.122954 TGAGAGAAATATATTAATGGGGGCTAA 57.877 33.333 0.00 0.00 0.00 3.09
4522 5029 8.694171 TGAGAGAAATATATTAATGGGGGCTA 57.306 34.615 0.00 0.00 0.00 3.93
4523 5030 7.588866 TGAGAGAAATATATTAATGGGGGCT 57.411 36.000 0.00 0.00 0.00 5.19
4524 5031 7.669722 TGTTGAGAGAAATATATTAATGGGGGC 59.330 37.037 0.00 0.00 0.00 5.80
4525 5032 9.759473 ATGTTGAGAGAAATATATTAATGGGGG 57.241 33.333 0.00 0.00 0.00 5.40
4535 5042 8.777413 GCATGCTTGTATGTTGAGAGAAATATA 58.223 33.333 11.37 0.00 0.00 0.86
4536 5043 7.255381 GGCATGCTTGTATGTTGAGAGAAATAT 60.255 37.037 18.92 0.00 0.00 1.28
4537 5044 6.038603 GGCATGCTTGTATGTTGAGAGAAATA 59.961 38.462 18.92 0.00 0.00 1.40
4538 5045 5.163581 GGCATGCTTGTATGTTGAGAGAAAT 60.164 40.000 18.92 0.00 0.00 2.17
4539 5046 4.156556 GGCATGCTTGTATGTTGAGAGAAA 59.843 41.667 18.92 0.00 0.00 2.52
4540 5047 3.691118 GGCATGCTTGTATGTTGAGAGAA 59.309 43.478 18.92 0.00 0.00 2.87
4541 5048 3.273434 GGCATGCTTGTATGTTGAGAGA 58.727 45.455 18.92 0.00 0.00 3.10
4542 5049 3.011818 TGGCATGCTTGTATGTTGAGAG 58.988 45.455 18.92 0.00 0.00 3.20
4543 5050 2.749076 GTGGCATGCTTGTATGTTGAGA 59.251 45.455 18.92 0.00 0.00 3.27
4544 5051 2.159338 GGTGGCATGCTTGTATGTTGAG 60.159 50.000 18.92 0.00 0.00 3.02
4545 5052 1.818060 GGTGGCATGCTTGTATGTTGA 59.182 47.619 18.92 0.00 0.00 3.18
4546 5053 1.820519 AGGTGGCATGCTTGTATGTTG 59.179 47.619 18.92 0.00 0.00 3.33
4547 5054 2.094675 GAGGTGGCATGCTTGTATGTT 58.905 47.619 18.92 0.00 0.00 2.71
4548 5055 1.004628 TGAGGTGGCATGCTTGTATGT 59.995 47.619 18.92 0.00 0.00 2.29
4549 5056 1.753930 TGAGGTGGCATGCTTGTATG 58.246 50.000 18.92 0.00 0.00 2.39
4550 5057 2.092267 TGATGAGGTGGCATGCTTGTAT 60.092 45.455 18.92 5.11 0.00 2.29
4551 5058 1.281577 TGATGAGGTGGCATGCTTGTA 59.718 47.619 18.92 0.00 0.00 2.41
4552 5059 0.038599 TGATGAGGTGGCATGCTTGT 59.961 50.000 18.92 0.00 0.00 3.16
4553 5060 1.399714 ATGATGAGGTGGCATGCTTG 58.600 50.000 18.92 0.00 0.00 4.01
4554 5061 2.029623 GAATGATGAGGTGGCATGCTT 58.970 47.619 18.92 0.00 0.00 3.91
4555 5062 1.064240 TGAATGATGAGGTGGCATGCT 60.064 47.619 18.92 0.00 0.00 3.79
4556 5063 1.395635 TGAATGATGAGGTGGCATGC 58.604 50.000 9.90 9.90 0.00 4.06
4557 5064 2.756207 TGTTGAATGATGAGGTGGCATG 59.244 45.455 0.00 0.00 0.00 4.06
4558 5065 3.090210 TGTTGAATGATGAGGTGGCAT 57.910 42.857 0.00 0.00 0.00 4.40
4559 5066 2.583024 TGTTGAATGATGAGGTGGCA 57.417 45.000 0.00 0.00 0.00 4.92
4560 5067 2.480759 GCATGTTGAATGATGAGGTGGC 60.481 50.000 0.00 0.00 0.00 5.01
4561 5068 2.756207 TGCATGTTGAATGATGAGGTGG 59.244 45.455 0.00 0.00 0.00 4.61
4562 5069 4.097286 TCATGCATGTTGAATGATGAGGTG 59.903 41.667 25.43 0.00 37.50 4.00
4563 5070 4.274978 TCATGCATGTTGAATGATGAGGT 58.725 39.130 25.43 0.00 37.50 3.85
4564 5071 4.911514 TCATGCATGTTGAATGATGAGG 57.088 40.909 25.43 0.00 37.50 3.86
4565 5072 7.201522 CCTTTTTCATGCATGTTGAATGATGAG 60.202 37.037 25.43 11.84 41.78 2.90
4566 5073 6.592220 CCTTTTTCATGCATGTTGAATGATGA 59.408 34.615 25.43 0.54 41.78 2.92
4567 5074 6.674519 GCCTTTTTCATGCATGTTGAATGATG 60.675 38.462 25.43 8.95 41.78 3.07
4568 5075 5.353123 GCCTTTTTCATGCATGTTGAATGAT 59.647 36.000 25.43 0.00 41.78 2.45
4569 5076 4.691685 GCCTTTTTCATGCATGTTGAATGA 59.308 37.500 25.43 2.95 40.56 2.57
4570 5077 4.693566 AGCCTTTTTCATGCATGTTGAATG 59.306 37.500 25.43 17.79 34.63 2.67
4571 5078 4.901868 AGCCTTTTTCATGCATGTTGAAT 58.098 34.783 25.43 3.92 33.37 2.57
4572 5079 4.202233 TGAGCCTTTTTCATGCATGTTGAA 60.202 37.500 25.43 11.74 0.00 2.69
4573 5080 3.321396 TGAGCCTTTTTCATGCATGTTGA 59.679 39.130 25.43 5.39 0.00 3.18
4574 5081 3.430895 GTGAGCCTTTTTCATGCATGTTG 59.569 43.478 25.43 12.01 0.00 3.33
4575 5082 3.555586 GGTGAGCCTTTTTCATGCATGTT 60.556 43.478 25.43 0.00 0.00 2.71
4576 5083 2.028748 GGTGAGCCTTTTTCATGCATGT 60.029 45.455 25.43 4.14 0.00 3.21
4577 5084 2.232941 AGGTGAGCCTTTTTCATGCATG 59.767 45.455 21.07 21.07 44.18 4.06
4578 5085 2.532843 AGGTGAGCCTTTTTCATGCAT 58.467 42.857 0.00 0.00 44.18 3.96
4579 5086 1.999648 AGGTGAGCCTTTTTCATGCA 58.000 45.000 0.00 0.00 44.18 3.96
4590 5097 1.891919 TTGCGTGTTGAGGTGAGCC 60.892 57.895 0.00 0.00 0.00 4.70
4591 5098 1.160329 AGTTGCGTGTTGAGGTGAGC 61.160 55.000 0.00 0.00 0.00 4.26
4592 5099 2.148916 TAGTTGCGTGTTGAGGTGAG 57.851 50.000 0.00 0.00 0.00 3.51
4593 5100 2.412870 CATAGTTGCGTGTTGAGGTGA 58.587 47.619 0.00 0.00 0.00 4.02
4594 5101 1.135972 GCATAGTTGCGTGTTGAGGTG 60.136 52.381 0.00 0.00 39.49 4.00
4595 5102 1.156736 GCATAGTTGCGTGTTGAGGT 58.843 50.000 0.00 0.00 39.49 3.85
4596 5103 3.975992 GCATAGTTGCGTGTTGAGG 57.024 52.632 0.00 0.00 39.49 3.86
4606 5113 7.781056 AGGTGGGTTTTTATTATGCATAGTTG 58.219 34.615 7.07 0.00 0.00 3.16
4607 5114 7.617723 TGAGGTGGGTTTTTATTATGCATAGTT 59.382 33.333 7.07 2.05 0.00 2.24
4608 5115 7.122715 TGAGGTGGGTTTTTATTATGCATAGT 58.877 34.615 6.50 6.74 0.00 2.12
4609 5116 7.581213 TGAGGTGGGTTTTTATTATGCATAG 57.419 36.000 6.50 0.00 0.00 2.23
4610 5117 7.397476 TGTTGAGGTGGGTTTTTATTATGCATA 59.603 33.333 1.16 1.16 0.00 3.14
4611 5118 6.212388 TGTTGAGGTGGGTTTTTATTATGCAT 59.788 34.615 3.79 3.79 0.00 3.96
4612 5119 5.540337 TGTTGAGGTGGGTTTTTATTATGCA 59.460 36.000 0.00 0.00 0.00 3.96
4613 5120 6.031751 TGTTGAGGTGGGTTTTTATTATGC 57.968 37.500 0.00 0.00 0.00 3.14
4614 5121 6.534793 GCATGTTGAGGTGGGTTTTTATTATG 59.465 38.462 0.00 0.00 0.00 1.90
4615 5122 6.212388 TGCATGTTGAGGTGGGTTTTTATTAT 59.788 34.615 0.00 0.00 0.00 1.28
4616 5123 5.540337 TGCATGTTGAGGTGGGTTTTTATTA 59.460 36.000 0.00 0.00 0.00 0.98
4617 5124 4.346418 TGCATGTTGAGGTGGGTTTTTATT 59.654 37.500 0.00 0.00 0.00 1.40
4618 5125 3.900601 TGCATGTTGAGGTGGGTTTTTAT 59.099 39.130 0.00 0.00 0.00 1.40
4619 5126 3.300388 TGCATGTTGAGGTGGGTTTTTA 58.700 40.909 0.00 0.00 0.00 1.52
4620 5127 2.114616 TGCATGTTGAGGTGGGTTTTT 58.885 42.857 0.00 0.00 0.00 1.94
4621 5128 1.786937 TGCATGTTGAGGTGGGTTTT 58.213 45.000 0.00 0.00 0.00 2.43
4622 5129 1.786937 TTGCATGTTGAGGTGGGTTT 58.213 45.000 0.00 0.00 0.00 3.27
4623 5130 1.412343 GTTTGCATGTTGAGGTGGGTT 59.588 47.619 0.00 0.00 0.00 4.11
4624 5131 1.039856 GTTTGCATGTTGAGGTGGGT 58.960 50.000 0.00 0.00 0.00 4.51
4625 5132 1.039068 TGTTTGCATGTTGAGGTGGG 58.961 50.000 0.00 0.00 0.00 4.61
4626 5133 2.679450 CATGTTTGCATGTTGAGGTGG 58.321 47.619 0.00 0.00 45.48 4.61
4644 5151 3.619483 CGGTGAAATTTTCATGCATGCAT 59.381 39.130 27.46 27.46 42.47 3.96
4645 5152 2.994578 CGGTGAAATTTTCATGCATGCA 59.005 40.909 25.04 25.04 42.47 3.96
4646 5153 2.995258 ACGGTGAAATTTTCATGCATGC 59.005 40.909 22.25 11.82 42.47 4.06
4647 5154 6.890663 AATACGGTGAAATTTTCATGCATG 57.109 33.333 21.07 21.07 42.47 4.06
4648 5155 7.169645 GCATAATACGGTGAAATTTTCATGCAT 59.830 33.333 14.54 0.00 42.47 3.96
4649 5156 6.475076 GCATAATACGGTGAAATTTTCATGCA 59.525 34.615 14.54 0.00 42.47 3.96
4650 5157 6.697019 AGCATAATACGGTGAAATTTTCATGC 59.303 34.615 14.54 15.74 42.47 4.06
4651 5158 9.897744 ATAGCATAATACGGTGAAATTTTCATG 57.102 29.630 14.54 12.42 42.47 3.07
4657 5164 9.569122 AGGTAAATAGCATAATACGGTGAAATT 57.431 29.630 0.00 0.00 0.00 1.82
4658 5165 9.569122 AAGGTAAATAGCATAATACGGTGAAAT 57.431 29.630 0.00 0.00 0.00 2.17
4659 5166 8.967664 AAGGTAAATAGCATAATACGGTGAAA 57.032 30.769 0.00 0.00 0.00 2.69
4660 5167 8.967664 AAAGGTAAATAGCATAATACGGTGAA 57.032 30.769 0.00 0.00 0.00 3.18
4727 5234 7.206687 TCAATGAGGTTTTGGTTATGTGAAAC 58.793 34.615 0.00 0.00 37.35 2.78
4728 5235 7.353414 TCAATGAGGTTTTGGTTATGTGAAA 57.647 32.000 0.00 0.00 0.00 2.69
4729 5236 6.968263 TCAATGAGGTTTTGGTTATGTGAA 57.032 33.333 0.00 0.00 0.00 3.18
4730 5237 6.549364 ACTTCAATGAGGTTTTGGTTATGTGA 59.451 34.615 0.00 0.00 0.00 3.58
4731 5238 6.748132 ACTTCAATGAGGTTTTGGTTATGTG 58.252 36.000 0.00 0.00 0.00 3.21
4732 5239 6.976934 ACTTCAATGAGGTTTTGGTTATGT 57.023 33.333 0.00 0.00 0.00 2.29
4733 5240 9.357652 CAATACTTCAATGAGGTTTTGGTTATG 57.642 33.333 16.63 0.00 31.19 1.90
4734 5241 8.034804 GCAATACTTCAATGAGGTTTTGGTTAT 58.965 33.333 22.39 1.11 33.71 1.89
4735 5242 7.014711 TGCAATACTTCAATGAGGTTTTGGTTA 59.985 33.333 22.39 0.00 33.71 2.85
4736 5243 6.183360 TGCAATACTTCAATGAGGTTTTGGTT 60.183 34.615 22.39 3.59 33.71 3.67
4737 5244 5.304101 TGCAATACTTCAATGAGGTTTTGGT 59.696 36.000 22.39 3.09 33.71 3.67
4738 5245 5.782047 TGCAATACTTCAATGAGGTTTTGG 58.218 37.500 22.39 10.30 33.71 3.28
4739 5246 7.712264 TTTGCAATACTTCAATGAGGTTTTG 57.288 32.000 18.92 18.92 35.20 2.44
4740 5247 7.768120 TGTTTTGCAATACTTCAATGAGGTTTT 59.232 29.630 18.84 0.00 0.00 2.43
4741 5248 7.271511 TGTTTTGCAATACTTCAATGAGGTTT 58.728 30.769 18.84 0.00 0.00 3.27
4742 5249 6.815089 TGTTTTGCAATACTTCAATGAGGTT 58.185 32.000 18.84 0.00 0.00 3.50
4743 5250 6.403866 TGTTTTGCAATACTTCAATGAGGT 57.596 33.333 18.84 2.99 0.00 3.85
4744 5251 7.063780 GGAATGTTTTGCAATACTTCAATGAGG 59.936 37.037 18.84 0.00 0.00 3.86
4745 5252 7.063780 GGGAATGTTTTGCAATACTTCAATGAG 59.936 37.037 18.84 0.00 0.00 2.90
4746 5253 6.873076 GGGAATGTTTTGCAATACTTCAATGA 59.127 34.615 18.84 0.00 0.00 2.57
4747 5254 6.183360 CGGGAATGTTTTGCAATACTTCAATG 60.183 38.462 18.84 10.26 0.00 2.82
4748 5255 5.868801 CGGGAATGTTTTGCAATACTTCAAT 59.131 36.000 18.84 3.70 0.00 2.57
4749 5256 5.226396 CGGGAATGTTTTGCAATACTTCAA 58.774 37.500 18.84 1.54 0.00 2.69
4750 5257 4.804108 CGGGAATGTTTTGCAATACTTCA 58.196 39.130 18.84 6.76 0.00 3.02
4751 5258 3.612423 GCGGGAATGTTTTGCAATACTTC 59.388 43.478 18.84 17.37 0.00 3.01
4752 5259 3.006323 TGCGGGAATGTTTTGCAATACTT 59.994 39.130 18.84 11.22 31.69 2.24
4753 5260 2.560542 TGCGGGAATGTTTTGCAATACT 59.439 40.909 18.84 1.97 31.69 2.12
4754 5261 2.953020 TGCGGGAATGTTTTGCAATAC 58.047 42.857 12.51 12.51 31.69 1.89
4755 5262 3.243873 TGTTGCGGGAATGTTTTGCAATA 60.244 39.130 0.00 0.00 45.95 1.90
4756 5263 2.142319 GTTGCGGGAATGTTTTGCAAT 58.858 42.857 0.00 0.00 45.95 3.56
4757 5264 1.134699 TGTTGCGGGAATGTTTTGCAA 60.135 42.857 0.00 0.00 42.68 4.08
4758 5265 0.461548 TGTTGCGGGAATGTTTTGCA 59.538 45.000 0.00 0.00 0.00 4.08
4759 5266 1.260297 GTTGTTGCGGGAATGTTTTGC 59.740 47.619 0.00 0.00 0.00 3.68
4760 5267 1.520590 CGTTGTTGCGGGAATGTTTTG 59.479 47.619 0.00 0.00 0.00 2.44
4761 5268 1.135333 ACGTTGTTGCGGGAATGTTTT 59.865 42.857 0.00 0.00 35.98 2.43
4762 5269 0.741915 ACGTTGTTGCGGGAATGTTT 59.258 45.000 0.00 0.00 35.98 2.83
4763 5270 0.030101 CACGTTGTTGCGGGAATGTT 59.970 50.000 0.00 0.00 37.48 2.71
4764 5271 1.652012 CACGTTGTTGCGGGAATGT 59.348 52.632 0.00 0.00 37.48 2.71
4765 5272 1.729131 GCACGTTGTTGCGGGAATG 60.729 57.895 0.00 0.00 37.48 2.67
4766 5273 2.642700 GCACGTTGTTGCGGGAAT 59.357 55.556 0.00 0.00 37.48 3.01
4773 5280 3.558282 GACGCTCCGCACGTTGTTG 62.558 63.158 0.00 0.00 45.24 3.33
4774 5281 3.335534 GACGCTCCGCACGTTGTT 61.336 61.111 0.00 0.00 45.24 2.83
4775 5282 3.858868 ATGACGCTCCGCACGTTGT 62.859 57.895 0.00 0.00 45.24 3.32
4776 5283 3.071459 GATGACGCTCCGCACGTTG 62.071 63.158 0.00 0.00 45.24 4.10
4777 5284 1.929806 TAGATGACGCTCCGCACGTT 61.930 55.000 0.00 0.00 45.24 3.99
4779 5286 1.655654 CTAGATGACGCTCCGCACG 60.656 63.158 0.00 0.00 0.00 5.34
4780 5287 0.179134 AACTAGATGACGCTCCGCAC 60.179 55.000 0.00 0.00 0.00 5.34
4781 5288 0.100682 GAACTAGATGACGCTCCGCA 59.899 55.000 0.00 0.00 0.00 5.69
4782 5289 0.100682 TGAACTAGATGACGCTCCGC 59.899 55.000 0.00 0.00 0.00 5.54
4783 5290 2.783828 ATGAACTAGATGACGCTCCG 57.216 50.000 0.00 0.00 0.00 4.63
4784 5291 4.517453 ACTCTATGAACTAGATGACGCTCC 59.483 45.833 0.00 0.00 35.89 4.70
4785 5292 5.237561 TCACTCTATGAACTAGATGACGCTC 59.762 44.000 0.00 0.00 35.89 5.03
4786 5293 5.008217 GTCACTCTATGAACTAGATGACGCT 59.992 44.000 0.00 0.00 39.72 5.07
4787 5294 5.209240 GTCACTCTATGAACTAGATGACGC 58.791 45.833 0.00 0.00 39.72 5.19
4788 5295 5.297029 TGGTCACTCTATGAACTAGATGACG 59.703 44.000 0.00 0.00 46.23 4.35
4789 5296 6.701145 TGGTCACTCTATGAACTAGATGAC 57.299 41.667 0.00 11.89 46.23 3.06
4795 5302 7.450634 AGTTGTACTTGGTCACTCTATGAACTA 59.549 37.037 0.00 0.00 46.23 2.24
4796 5303 6.267928 AGTTGTACTTGGTCACTCTATGAACT 59.732 38.462 0.00 0.00 46.23 3.01
4797 5304 6.456501 AGTTGTACTTGGTCACTCTATGAAC 58.543 40.000 0.00 0.00 46.27 3.18
4798 5305 6.493802 AGAGTTGTACTTGGTCACTCTATGAA 59.506 38.462 0.00 0.00 39.72 2.57
4799 5306 6.010850 AGAGTTGTACTTGGTCACTCTATGA 58.989 40.000 0.00 0.00 32.15 2.15
4800 5307 6.071896 TGAGAGTTGTACTTGGTCACTCTATG 60.072 42.308 0.19 0.00 33.81 2.23
4801 5308 6.010850 TGAGAGTTGTACTTGGTCACTCTAT 58.989 40.000 0.19 0.00 33.81 1.98
4802 5309 5.382616 TGAGAGTTGTACTTGGTCACTCTA 58.617 41.667 0.19 0.00 33.81 2.43
4803 5310 4.215908 TGAGAGTTGTACTTGGTCACTCT 58.784 43.478 0.00 0.00 36.01 3.24
4804 5311 4.585955 TGAGAGTTGTACTTGGTCACTC 57.414 45.455 0.00 0.00 0.00 3.51
4820 5327 9.950680 GAGAAGTAGATAGAAAGATGTTGAGAG 57.049 37.037 0.00 0.00 0.00 3.20
4825 5332 6.041069 CGGGGAGAAGTAGATAGAAAGATGTT 59.959 42.308 0.00 0.00 0.00 2.71



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.