Multiple sequence alignment - TraesCS2A01G104400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G104400 chr2A 100.000 3360 0 0 1 3360 57825164 57828523 0.000000e+00 6205.0
1 TraesCS2A01G104400 chr5A 97.233 2891 65 4 1 2877 564353219 564350330 0.000000e+00 4881.0
2 TraesCS2A01G104400 chr5A 97.838 2636 54 3 250 2884 570487805 570490438 0.000000e+00 4549.0
3 TraesCS2A01G104400 chrUn 91.084 2916 161 57 1 2879 96552233 96555086 0.000000e+00 3853.0
4 TraesCS2A01G104400 chr4D 93.436 1432 83 11 1 1425 459190501 459191928 0.000000e+00 2113.0
5 TraesCS2A01G104400 chr4D 91.520 1309 72 26 1168 2460 459191750 459193035 0.000000e+00 1766.0
6 TraesCS2A01G104400 chr2D 93.236 1434 84 11 1 1425 469108778 469107349 0.000000e+00 2098.0
7 TraesCS2A01G104400 chr2D 89.680 1405 98 25 1177 2556 469107518 469106136 0.000000e+00 1748.0
8 TraesCS2A01G104400 chr2D 89.275 1296 80 28 1177 2460 631749157 631747909 0.000000e+00 1568.0
9 TraesCS2A01G104400 chr2D 93.002 443 28 3 2443 2884 330863357 330862917 0.000000e+00 643.0
10 TraesCS2A01G104400 chr2D 87.842 329 25 8 2553 2879 362106698 362106383 4.090000e-99 372.0
11 TraesCS2A01G104400 chr2D 98.204 167 3 0 2877 3043 56195603 56195769 3.280000e-75 292.0
12 TraesCS2A01G104400 chr2D 90.659 182 17 0 3038 3219 391812512 391812331 3.350000e-60 243.0
13 TraesCS2A01G104400 chr2D 91.525 177 14 1 3042 3218 414960425 414960250 3.350000e-60 243.0
14 TraesCS2A01G104400 chr2D 91.139 158 9 5 3202 3359 56195767 56195919 3.400000e-50 209.0
15 TraesCS2A01G104400 chr1A 93.159 1418 85 12 1 1410 35564845 35563432 0.000000e+00 2071.0
16 TraesCS2A01G104400 chr1A 92.742 1433 92 11 1 1425 461967630 461966202 0.000000e+00 2060.0
17 TraesCS2A01G104400 chr7A 94.436 1348 69 6 1 1344 48780463 48781808 0.000000e+00 2069.0
18 TraesCS2A01G104400 chr7A 93.426 1217 64 7 1256 2460 48781641 48782853 0.000000e+00 1790.0
19 TraesCS2A01G104400 chr7A 95.092 163 8 0 3042 3204 547065415 547065577 1.200000e-64 257.0
20 TraesCS2A01G104400 chr7B 92.270 1436 99 12 1 1430 551485559 551484130 0.000000e+00 2026.0
21 TraesCS2A01G104400 chr7B 88.971 1351 95 27 1177 2506 551484303 551482986 0.000000e+00 1620.0
22 TraesCS2A01G104400 chr7B 80.736 462 43 20 2445 2883 551483096 551482658 5.410000e-83 318.0
23 TraesCS2A01G104400 chr1B 92.131 1436 101 12 1 1430 127027210 127025781 0.000000e+00 2015.0
24 TraesCS2A01G104400 chr1B 91.154 1300 84 17 1177 2460 127025955 127024671 0.000000e+00 1735.0
25 TraesCS2A01G104400 chr1B 89.834 482 27 11 2040 2506 470720338 470720812 1.730000e-167 599.0
26 TraesCS2A01G104400 chr1B 82.456 456 35 25 2445 2878 470720703 470721135 1.150000e-94 357.0
27 TraesCS2A01G104400 chr2B 93.426 1217 64 9 1256 2460 677292341 677293553 0.000000e+00 1790.0
28 TraesCS2A01G104400 chr2B 96.407 167 6 0 2877 3043 88928712 88928878 3.300000e-70 276.0
29 TraesCS2A01G104400 chr2B 89.873 158 11 5 3202 3359 88928876 88929028 7.350000e-47 198.0
30 TraesCS2A01G104400 chr3B 90.749 1308 84 21 1168 2460 8505272 8506557 0.000000e+00 1711.0
31 TraesCS2A01G104400 chr3B 90.077 1300 89 18 1177 2458 597427202 597428479 0.000000e+00 1650.0
32 TraesCS2A01G104400 chr3B 89.911 337 20 5 2553 2876 564172724 564173059 4.010000e-114 422.0
33 TraesCS2A01G104400 chr3B 82.022 356 30 23 2553 2877 597428496 597428848 4.270000e-69 272.0
34 TraesCS2A01G104400 chr3B 97.222 36 1 0 2512 2547 564172711 564172746 1.010000e-05 62.1
35 TraesCS2A01G104400 chr3D 94.619 985 44 5 1484 2460 6991411 6992394 0.000000e+00 1517.0
36 TraesCS2A01G104400 chr3D 87.316 339 26 8 2557 2880 5545055 5545391 4.090000e-99 372.0
37 TraesCS2A01G104400 chr7D 83.556 748 53 33 2157 2879 69948231 69948933 1.310000e-178 636.0
38 TraesCS2A01G104400 chr7D 91.525 177 14 1 3033 3208 88055262 88055086 3.350000e-60 243.0
39 TraesCS2A01G104400 chr7D 92.857 168 11 1 3042 3209 171308151 171307985 3.350000e-60 243.0
40 TraesCS2A01G104400 chr5B 91.957 460 22 7 2434 2880 92572069 92572526 6.120000e-177 630.0
41 TraesCS2A01G104400 chr4A 94.643 168 8 1 3038 3204 613423887 613424054 3.330000e-65 259.0
42 TraesCS2A01G104400 chr6D 94.048 168 10 0 3040 3207 266777477 266777644 4.300000e-64 255.0
43 TraesCS2A01G104400 chr5D 94.512 164 9 0 3041 3204 431780589 431780426 1.550000e-63 254.0
44 TraesCS2A01G104400 chr5D 92.529 174 12 1 3042 3215 488868763 488868591 7.200000e-62 248.0
45 TraesCS2A01G104400 chr6B 89.344 122 9 1 2922 3043 124547981 124548098 2.090000e-32 150.0
46 TraesCS2A01G104400 chr6B 88.571 70 6 2 2922 2990 34867233 34867301 2.150000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G104400 chr2A 57825164 57828523 3359 False 6205.000000 6205 100.000000 1 3360 1 chr2A.!!$F1 3359
1 TraesCS2A01G104400 chr5A 564350330 564353219 2889 True 4881.000000 4881 97.233000 1 2877 1 chr5A.!!$R1 2876
2 TraesCS2A01G104400 chr5A 570487805 570490438 2633 False 4549.000000 4549 97.838000 250 2884 1 chr5A.!!$F1 2634
3 TraesCS2A01G104400 chrUn 96552233 96555086 2853 False 3853.000000 3853 91.084000 1 2879 1 chrUn.!!$F1 2878
4 TraesCS2A01G104400 chr4D 459190501 459193035 2534 False 1939.500000 2113 92.478000 1 2460 2 chr4D.!!$F1 2459
5 TraesCS2A01G104400 chr2D 469106136 469108778 2642 True 1923.000000 2098 91.458000 1 2556 2 chr2D.!!$R6 2555
6 TraesCS2A01G104400 chr2D 631747909 631749157 1248 True 1568.000000 1568 89.275000 1177 2460 1 chr2D.!!$R5 1283
7 TraesCS2A01G104400 chr1A 35563432 35564845 1413 True 2071.000000 2071 93.159000 1 1410 1 chr1A.!!$R1 1409
8 TraesCS2A01G104400 chr1A 461966202 461967630 1428 True 2060.000000 2060 92.742000 1 1425 1 chr1A.!!$R2 1424
9 TraesCS2A01G104400 chr7A 48780463 48782853 2390 False 1929.500000 2069 93.931000 1 2460 2 chr7A.!!$F2 2459
10 TraesCS2A01G104400 chr7B 551482658 551485559 2901 True 1321.333333 2026 87.325667 1 2883 3 chr7B.!!$R1 2882
11 TraesCS2A01G104400 chr1B 127024671 127027210 2539 True 1875.000000 2015 91.642500 1 2460 2 chr1B.!!$R1 2459
12 TraesCS2A01G104400 chr1B 470720338 470721135 797 False 478.000000 599 86.145000 2040 2878 2 chr1B.!!$F1 838
13 TraesCS2A01G104400 chr2B 677292341 677293553 1212 False 1790.000000 1790 93.426000 1256 2460 1 chr2B.!!$F1 1204
14 TraesCS2A01G104400 chr3B 8505272 8506557 1285 False 1711.000000 1711 90.749000 1168 2460 1 chr3B.!!$F1 1292
15 TraesCS2A01G104400 chr3B 597427202 597428848 1646 False 961.000000 1650 86.049500 1177 2877 2 chr3B.!!$F3 1700
16 TraesCS2A01G104400 chr3D 6991411 6992394 983 False 1517.000000 1517 94.619000 1484 2460 1 chr3D.!!$F2 976
17 TraesCS2A01G104400 chr7D 69948231 69948933 702 False 636.000000 636 83.556000 2157 2879 1 chr7D.!!$F1 722

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
710 715 3.926058 ACCTAGTTGATGCCGGTTATT 57.074 42.857 1.9 0.0 0.0 1.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2491 2767 3.440173 GTGCACTACAGCCATACATGTTT 59.56 43.478 10.32 0.0 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
662 664 6.683715 CCTTACGAAACCATTGTAACCAATT 58.316 36.000 0.00 0.00 39.28 2.32
710 715 3.926058 ACCTAGTTGATGCCGGTTATT 57.074 42.857 1.90 0.00 0.00 1.40
713 718 4.196193 CCTAGTTGATGCCGGTTATTGAA 58.804 43.478 1.90 0.00 0.00 2.69
1074 1080 3.322254 CCTTGGTAGACCATAGGCTACAG 59.678 52.174 6.49 0.00 46.97 2.74
1394 1631 9.949174 TCAAACCATATATTTGTGATGATTTCG 57.051 29.630 10.06 0.00 38.08 3.46
1889 2134 5.435291 CTGATGCTCCCTTCTTGAATAACT 58.565 41.667 0.00 0.00 0.00 2.24
2491 2767 6.451393 GTTGCTTTTGGATGTTTGGTATGTA 58.549 36.000 0.00 0.00 0.00 2.29
2575 2880 8.840321 GCCTATTTGTATGTGAAAGACATGTAT 58.160 33.333 0.00 0.00 45.43 2.29
2726 3147 5.093169 TGCTGCCAAAAATTTGAATTTCG 57.907 34.783 7.44 0.00 40.55 3.46
2853 3286 2.009774 CCATTCCATTCCGTGACAGTC 58.990 52.381 0.00 0.00 0.00 3.51
2880 3313 2.293399 CTCAACCAAACACACCCTAAGC 59.707 50.000 0.00 0.00 0.00 3.09
2883 3316 1.493022 ACCAAACACACCCTAAGCTGA 59.507 47.619 0.00 0.00 0.00 4.26
2884 3317 2.092103 ACCAAACACACCCTAAGCTGAA 60.092 45.455 0.00 0.00 0.00 3.02
2885 3318 2.554032 CCAAACACACCCTAAGCTGAAG 59.446 50.000 0.00 0.00 0.00 3.02
2886 3319 2.554032 CAAACACACCCTAAGCTGAAGG 59.446 50.000 8.19 8.19 0.00 3.46
2891 3324 2.892425 CCTAAGCTGAAGGGCGCG 60.892 66.667 0.00 0.00 37.29 6.86
2892 3325 2.125512 CTAAGCTGAAGGGCGCGT 60.126 61.111 8.43 0.00 37.29 6.01
2893 3326 1.141019 CTAAGCTGAAGGGCGCGTA 59.859 57.895 8.43 0.00 37.29 4.42
2894 3327 0.872021 CTAAGCTGAAGGGCGCGTAG 60.872 60.000 8.43 0.00 37.29 3.51
2895 3328 1.317431 TAAGCTGAAGGGCGCGTAGA 61.317 55.000 8.43 0.00 37.29 2.59
2896 3329 1.961180 AAGCTGAAGGGCGCGTAGAT 61.961 55.000 8.43 0.00 37.29 1.98
2897 3330 1.521681 GCTGAAGGGCGCGTAGATT 60.522 57.895 8.43 0.00 0.00 2.40
2898 3331 1.766143 GCTGAAGGGCGCGTAGATTG 61.766 60.000 8.43 0.00 0.00 2.67
2899 3332 1.766143 CTGAAGGGCGCGTAGATTGC 61.766 60.000 8.43 0.00 0.00 3.56
2904 3337 3.717899 GCGCGTAGATTGCCATCA 58.282 55.556 8.43 0.00 0.00 3.07
2905 3338 1.276844 GCGCGTAGATTGCCATCAC 59.723 57.895 8.43 0.00 0.00 3.06
2906 3339 1.559814 CGCGTAGATTGCCATCACG 59.440 57.895 14.21 14.21 37.17 4.35
2907 3340 0.869880 CGCGTAGATTGCCATCACGA 60.870 55.000 19.44 0.00 36.68 4.35
2908 3341 1.502231 GCGTAGATTGCCATCACGAT 58.498 50.000 19.44 0.00 36.68 3.73
2909 3342 1.193203 GCGTAGATTGCCATCACGATG 59.807 52.381 19.44 0.00 36.68 3.84
2910 3343 2.742774 CGTAGATTGCCATCACGATGA 58.257 47.619 8.62 0.00 41.20 2.92
2911 3344 2.728318 CGTAGATTGCCATCACGATGAG 59.272 50.000 8.62 0.60 41.20 2.90
2912 3345 3.550842 CGTAGATTGCCATCACGATGAGA 60.551 47.826 8.62 0.00 41.20 3.27
2913 3346 3.109044 AGATTGCCATCACGATGAGAG 57.891 47.619 8.62 0.00 41.20 3.20
2914 3347 2.433604 AGATTGCCATCACGATGAGAGT 59.566 45.455 8.62 0.00 41.20 3.24
2915 3348 3.638627 AGATTGCCATCACGATGAGAGTA 59.361 43.478 8.62 0.00 41.20 2.59
2916 3349 2.871182 TGCCATCACGATGAGAGTAC 57.129 50.000 8.62 0.00 41.20 2.73
2917 3350 2.379005 TGCCATCACGATGAGAGTACT 58.621 47.619 8.62 0.00 41.20 2.73
2918 3351 2.099756 TGCCATCACGATGAGAGTACTG 59.900 50.000 0.00 0.00 41.20 2.74
2919 3352 2.736978 CCATCACGATGAGAGTACTGC 58.263 52.381 0.00 0.00 41.20 4.40
2920 3353 2.544694 CCATCACGATGAGAGTACTGCC 60.545 54.545 0.00 0.00 41.20 4.85
2921 3354 0.733150 TCACGATGAGAGTACTGCCG 59.267 55.000 0.00 0.00 0.00 5.69
2922 3355 0.733150 CACGATGAGAGTACTGCCGA 59.267 55.000 0.00 0.00 0.00 5.54
2923 3356 1.335182 CACGATGAGAGTACTGCCGAT 59.665 52.381 0.00 0.00 0.00 4.18
2924 3357 1.335182 ACGATGAGAGTACTGCCGATG 59.665 52.381 0.00 0.00 0.00 3.84
2925 3358 1.604278 CGATGAGAGTACTGCCGATGA 59.396 52.381 0.00 0.00 0.00 2.92
2926 3359 2.227626 CGATGAGAGTACTGCCGATGAT 59.772 50.000 0.00 0.00 0.00 2.45
2927 3360 3.573598 GATGAGAGTACTGCCGATGATG 58.426 50.000 0.00 0.00 0.00 3.07
2928 3361 1.067669 TGAGAGTACTGCCGATGATGC 59.932 52.381 0.00 0.00 0.00 3.91
2929 3362 0.031314 AGAGTACTGCCGATGATGCG 59.969 55.000 0.00 0.00 0.00 4.73
2937 3370 3.250986 CGATGATGCGGATGCTGG 58.749 61.111 0.00 0.00 43.34 4.85
2938 3371 1.301165 CGATGATGCGGATGCTGGA 60.301 57.895 0.00 0.00 43.34 3.86
2939 3372 1.289800 CGATGATGCGGATGCTGGAG 61.290 60.000 0.00 0.00 43.34 3.86
2940 3373 0.954449 GATGATGCGGATGCTGGAGG 60.954 60.000 0.00 0.00 43.34 4.30
2941 3374 1.703014 ATGATGCGGATGCTGGAGGT 61.703 55.000 0.00 0.00 43.34 3.85
2942 3375 1.596477 GATGCGGATGCTGGAGGTC 60.596 63.158 0.00 0.00 43.34 3.85
2943 3376 2.315781 GATGCGGATGCTGGAGGTCA 62.316 60.000 0.00 0.00 43.34 4.02
2944 3377 2.202987 GCGGATGCTGGAGGTCAG 60.203 66.667 0.00 0.00 46.03 3.51
2945 3378 2.503061 CGGATGCTGGAGGTCAGG 59.497 66.667 0.00 0.00 43.54 3.86
2946 3379 2.191641 GGATGCTGGAGGTCAGGC 59.808 66.667 0.00 0.00 43.54 4.85
2947 3380 2.373707 GGATGCTGGAGGTCAGGCT 61.374 63.158 0.00 0.00 43.54 4.58
2948 3381 1.153208 GATGCTGGAGGTCAGGCTG 60.153 63.158 8.58 8.58 43.54 4.85
2949 3382 1.614525 ATGCTGGAGGTCAGGCTGA 60.615 57.895 14.43 14.43 43.54 4.26
2950 3383 0.987081 ATGCTGGAGGTCAGGCTGAT 60.987 55.000 21.84 5.21 43.54 2.90
2951 3384 1.153208 GCTGGAGGTCAGGCTGATG 60.153 63.158 21.84 8.11 43.54 3.07
2952 3385 1.908340 GCTGGAGGTCAGGCTGATGT 61.908 60.000 21.84 10.97 43.54 3.06
2953 3386 0.107800 CTGGAGGTCAGGCTGATGTG 60.108 60.000 21.84 4.67 39.76 3.21
2954 3387 0.837691 TGGAGGTCAGGCTGATGTGT 60.838 55.000 21.84 5.52 0.00 3.72
2955 3388 0.326264 GGAGGTCAGGCTGATGTGTT 59.674 55.000 21.84 4.74 0.00 3.32
2956 3389 1.446907 GAGGTCAGGCTGATGTGTTG 58.553 55.000 21.84 0.00 0.00 3.33
2957 3390 1.002430 GAGGTCAGGCTGATGTGTTGA 59.998 52.381 21.84 0.00 0.00 3.18
2958 3391 1.002888 AGGTCAGGCTGATGTGTTGAG 59.997 52.381 21.84 0.00 0.00 3.02
2959 3392 1.446907 GTCAGGCTGATGTGTTGAGG 58.553 55.000 21.84 0.00 0.00 3.86
2960 3393 0.325933 TCAGGCTGATGTGTTGAGGG 59.674 55.000 14.43 0.00 0.00 4.30
2961 3394 0.037303 CAGGCTGATGTGTTGAGGGT 59.963 55.000 9.42 0.00 0.00 4.34
2962 3395 0.773644 AGGCTGATGTGTTGAGGGTT 59.226 50.000 0.00 0.00 0.00 4.11
2963 3396 0.883833 GGCTGATGTGTTGAGGGTTG 59.116 55.000 0.00 0.00 0.00 3.77
2964 3397 0.883833 GCTGATGTGTTGAGGGTTGG 59.116 55.000 0.00 0.00 0.00 3.77
2965 3398 1.545428 GCTGATGTGTTGAGGGTTGGA 60.545 52.381 0.00 0.00 0.00 3.53
2966 3399 2.430465 CTGATGTGTTGAGGGTTGGAG 58.570 52.381 0.00 0.00 0.00 3.86
2967 3400 2.038952 CTGATGTGTTGAGGGTTGGAGA 59.961 50.000 0.00 0.00 0.00 3.71
2968 3401 2.644299 TGATGTGTTGAGGGTTGGAGAT 59.356 45.455 0.00 0.00 0.00 2.75
2969 3402 2.566833 TGTGTTGAGGGTTGGAGATG 57.433 50.000 0.00 0.00 0.00 2.90
2970 3403 1.073763 TGTGTTGAGGGTTGGAGATGG 59.926 52.381 0.00 0.00 0.00 3.51
2971 3404 1.073923 GTGTTGAGGGTTGGAGATGGT 59.926 52.381 0.00 0.00 0.00 3.55
2972 3405 1.073763 TGTTGAGGGTTGGAGATGGTG 59.926 52.381 0.00 0.00 0.00 4.17
2973 3406 1.073923 GTTGAGGGTTGGAGATGGTGT 59.926 52.381 0.00 0.00 0.00 4.16
2974 3407 0.984230 TGAGGGTTGGAGATGGTGTC 59.016 55.000 0.00 0.00 0.00 3.67
2975 3408 1.280457 GAGGGTTGGAGATGGTGTCT 58.720 55.000 0.00 0.00 40.81 3.41
2976 3409 2.225522 TGAGGGTTGGAGATGGTGTCTA 60.226 50.000 0.00 0.00 37.29 2.59
2977 3410 3.041946 GAGGGTTGGAGATGGTGTCTAT 58.958 50.000 0.00 0.00 37.29 1.98
2978 3411 3.456277 GAGGGTTGGAGATGGTGTCTATT 59.544 47.826 0.00 0.00 37.29 1.73
2979 3412 4.631234 AGGGTTGGAGATGGTGTCTATTA 58.369 43.478 0.00 0.00 37.29 0.98
2980 3413 4.656112 AGGGTTGGAGATGGTGTCTATTAG 59.344 45.833 0.00 0.00 37.29 1.73
2981 3414 4.202367 GGGTTGGAGATGGTGTCTATTAGG 60.202 50.000 0.00 0.00 37.29 2.69
2982 3415 4.202367 GGTTGGAGATGGTGTCTATTAGGG 60.202 50.000 0.00 0.00 37.29 3.53
2983 3416 2.972713 TGGAGATGGTGTCTATTAGGGC 59.027 50.000 0.00 0.00 37.29 5.19
2984 3417 3.243724 GGAGATGGTGTCTATTAGGGCT 58.756 50.000 0.00 0.00 37.29 5.19
2985 3418 3.007398 GGAGATGGTGTCTATTAGGGCTG 59.993 52.174 0.00 0.00 37.29 4.85
2986 3419 3.643792 GAGATGGTGTCTATTAGGGCTGT 59.356 47.826 0.00 0.00 37.29 4.40
2987 3420 3.389329 AGATGGTGTCTATTAGGGCTGTG 59.611 47.826 0.00 0.00 34.69 3.66
2988 3421 1.209504 TGGTGTCTATTAGGGCTGTGC 59.790 52.381 0.00 0.00 0.00 4.57
2989 3422 1.486726 GGTGTCTATTAGGGCTGTGCT 59.513 52.381 0.00 0.00 0.00 4.40
2990 3423 2.555199 GTGTCTATTAGGGCTGTGCTG 58.445 52.381 0.00 0.00 0.00 4.41
2991 3424 1.134401 TGTCTATTAGGGCTGTGCTGC 60.134 52.381 0.00 0.00 0.00 5.25
2992 3425 1.134401 GTCTATTAGGGCTGTGCTGCA 60.134 52.381 0.00 0.00 34.04 4.41
2993 3426 1.559219 TCTATTAGGGCTGTGCTGCAA 59.441 47.619 2.77 0.00 34.04 4.08
2994 3427 1.672881 CTATTAGGGCTGTGCTGCAAC 59.327 52.381 2.77 0.00 34.04 4.17
2995 3428 0.038744 ATTAGGGCTGTGCTGCAACT 59.961 50.000 2.77 0.64 34.04 3.16
2996 3429 0.178992 TTAGGGCTGTGCTGCAACTT 60.179 50.000 2.77 0.00 34.04 2.66
2997 3430 0.890542 TAGGGCTGTGCTGCAACTTG 60.891 55.000 2.77 0.00 34.04 3.16
2998 3431 2.195567 GGGCTGTGCTGCAACTTGA 61.196 57.895 2.77 0.00 34.04 3.02
2999 3432 1.735360 GGCTGTGCTGCAACTTGAA 59.265 52.632 2.77 0.00 34.04 2.69
3000 3433 0.102844 GGCTGTGCTGCAACTTGAAA 59.897 50.000 2.77 0.00 34.04 2.69
3001 3434 1.471327 GGCTGTGCTGCAACTTGAAAA 60.471 47.619 2.77 0.00 34.04 2.29
3002 3435 2.476821 GCTGTGCTGCAACTTGAAAAT 58.523 42.857 2.77 0.00 0.00 1.82
3003 3436 3.552684 GGCTGTGCTGCAACTTGAAAATA 60.553 43.478 2.77 0.00 34.04 1.40
3004 3437 3.671928 GCTGTGCTGCAACTTGAAAATAG 59.328 43.478 2.77 0.00 0.00 1.73
3005 3438 4.232221 CTGTGCTGCAACTTGAAAATAGG 58.768 43.478 2.77 0.00 0.00 2.57
3006 3439 2.989166 GTGCTGCAACTTGAAAATAGGC 59.011 45.455 2.77 0.00 0.00 3.93
3007 3440 2.892852 TGCTGCAACTTGAAAATAGGCT 59.107 40.909 0.00 0.00 0.00 4.58
3008 3441 3.057315 TGCTGCAACTTGAAAATAGGCTC 60.057 43.478 0.00 0.00 0.00 4.70
3009 3442 3.751621 CTGCAACTTGAAAATAGGCTCG 58.248 45.455 0.00 0.00 0.00 5.03
3010 3443 3.146066 TGCAACTTGAAAATAGGCTCGT 58.854 40.909 0.00 0.00 0.00 4.18
3011 3444 3.058293 TGCAACTTGAAAATAGGCTCGTG 60.058 43.478 0.00 0.00 0.00 4.35
3012 3445 3.670627 GCAACTTGAAAATAGGCTCGTGG 60.671 47.826 0.00 0.00 0.00 4.94
3013 3446 3.418684 ACTTGAAAATAGGCTCGTGGT 57.581 42.857 0.00 0.00 0.00 4.16
3014 3447 4.546829 ACTTGAAAATAGGCTCGTGGTA 57.453 40.909 0.00 0.00 0.00 3.25
3015 3448 5.099042 ACTTGAAAATAGGCTCGTGGTAT 57.901 39.130 0.00 0.00 0.00 2.73
3016 3449 4.876107 ACTTGAAAATAGGCTCGTGGTATG 59.124 41.667 0.00 0.00 0.00 2.39
3017 3450 4.481368 TGAAAATAGGCTCGTGGTATGT 57.519 40.909 0.00 0.00 0.00 2.29
3018 3451 5.601583 TGAAAATAGGCTCGTGGTATGTA 57.398 39.130 0.00 0.00 0.00 2.29
3019 3452 6.169557 TGAAAATAGGCTCGTGGTATGTAT 57.830 37.500 0.00 0.00 0.00 2.29
3020 3453 5.989168 TGAAAATAGGCTCGTGGTATGTATG 59.011 40.000 0.00 0.00 0.00 2.39
3021 3454 5.546621 AAATAGGCTCGTGGTATGTATGT 57.453 39.130 0.00 0.00 0.00 2.29
3022 3455 6.659745 AAATAGGCTCGTGGTATGTATGTA 57.340 37.500 0.00 0.00 0.00 2.29
3023 3456 5.899120 ATAGGCTCGTGGTATGTATGTAG 57.101 43.478 0.00 0.00 0.00 2.74
3024 3457 3.563223 AGGCTCGTGGTATGTATGTAGT 58.437 45.455 0.00 0.00 0.00 2.73
3025 3458 4.722220 AGGCTCGTGGTATGTATGTAGTA 58.278 43.478 0.00 0.00 0.00 1.82
3026 3459 4.760715 AGGCTCGTGGTATGTATGTAGTAG 59.239 45.833 0.00 0.00 0.00 2.57
3027 3460 4.082895 GGCTCGTGGTATGTATGTAGTAGG 60.083 50.000 0.00 0.00 0.00 3.18
3028 3461 4.082895 GCTCGTGGTATGTATGTAGTAGGG 60.083 50.000 0.00 0.00 0.00 3.53
3029 3462 5.052693 TCGTGGTATGTATGTAGTAGGGT 57.947 43.478 0.00 0.00 0.00 4.34
3030 3463 4.823442 TCGTGGTATGTATGTAGTAGGGTG 59.177 45.833 0.00 0.00 0.00 4.61
3031 3464 4.558095 CGTGGTATGTATGTAGTAGGGTGC 60.558 50.000 0.00 0.00 0.00 5.01
3032 3465 4.587684 GTGGTATGTATGTAGTAGGGTGCT 59.412 45.833 0.00 0.00 0.00 4.40
3033 3466 5.070047 GTGGTATGTATGTAGTAGGGTGCTT 59.930 44.000 0.00 0.00 0.00 3.91
3034 3467 5.664006 TGGTATGTATGTAGTAGGGTGCTTT 59.336 40.000 0.00 0.00 0.00 3.51
3035 3468 6.157297 TGGTATGTATGTAGTAGGGTGCTTTT 59.843 38.462 0.00 0.00 0.00 2.27
3036 3469 6.482308 GGTATGTATGTAGTAGGGTGCTTTTG 59.518 42.308 0.00 0.00 0.00 2.44
3037 3470 4.839121 TGTATGTAGTAGGGTGCTTTTGG 58.161 43.478 0.00 0.00 0.00 3.28
3038 3471 4.287585 TGTATGTAGTAGGGTGCTTTTGGT 59.712 41.667 0.00 0.00 0.00 3.67
3039 3472 3.868619 TGTAGTAGGGTGCTTTTGGTT 57.131 42.857 0.00 0.00 0.00 3.67
3040 3473 3.482436 TGTAGTAGGGTGCTTTTGGTTG 58.518 45.455 0.00 0.00 0.00 3.77
3041 3474 2.748209 AGTAGGGTGCTTTTGGTTGT 57.252 45.000 0.00 0.00 0.00 3.32
3042 3475 3.868619 AGTAGGGTGCTTTTGGTTGTA 57.131 42.857 0.00 0.00 0.00 2.41
3043 3476 3.483421 AGTAGGGTGCTTTTGGTTGTAC 58.517 45.455 0.00 0.00 0.00 2.90
3044 3477 2.748209 AGGGTGCTTTTGGTTGTACT 57.252 45.000 0.00 0.00 0.00 2.73
3045 3478 2.583143 AGGGTGCTTTTGGTTGTACTC 58.417 47.619 0.00 0.00 0.00 2.59
3046 3479 1.611977 GGGTGCTTTTGGTTGTACTCC 59.388 52.381 0.00 0.00 0.00 3.85
3047 3480 1.611977 GGTGCTTTTGGTTGTACTCCC 59.388 52.381 0.00 0.00 0.00 4.30
3048 3481 2.583143 GTGCTTTTGGTTGTACTCCCT 58.417 47.619 0.00 0.00 0.00 4.20
3049 3482 2.552743 GTGCTTTTGGTTGTACTCCCTC 59.447 50.000 0.00 0.00 0.00 4.30
3050 3483 2.160205 GCTTTTGGTTGTACTCCCTCC 58.840 52.381 0.00 0.00 0.00 4.30
3051 3484 2.423577 CTTTTGGTTGTACTCCCTCCG 58.576 52.381 0.00 0.00 0.00 4.63
3052 3485 1.426751 TTTGGTTGTACTCCCTCCGT 58.573 50.000 0.00 0.00 0.00 4.69
3053 3486 1.426751 TTGGTTGTACTCCCTCCGTT 58.573 50.000 0.00 0.00 0.00 4.44
3054 3487 0.971386 TGGTTGTACTCCCTCCGTTC 59.029 55.000 0.00 0.00 0.00 3.95
3055 3488 0.248565 GGTTGTACTCCCTCCGTTCC 59.751 60.000 0.00 0.00 0.00 3.62
3056 3489 0.108945 GTTGTACTCCCTCCGTTCCG 60.109 60.000 0.00 0.00 0.00 4.30
3057 3490 0.251297 TTGTACTCCCTCCGTTCCGA 60.251 55.000 0.00 0.00 0.00 4.55
3058 3491 0.251297 TGTACTCCCTCCGTTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
3059 3492 0.890683 GTACTCCCTCCGTTCCGAAA 59.109 55.000 0.00 0.00 0.00 3.46
3060 3493 1.479730 GTACTCCCTCCGTTCCGAAAT 59.520 52.381 0.00 0.00 0.00 2.17
3061 3494 0.249398 ACTCCCTCCGTTCCGAAATG 59.751 55.000 0.00 0.00 0.00 2.32
3062 3495 0.249398 CTCCCTCCGTTCCGAAATGT 59.751 55.000 0.00 0.00 0.00 2.71
3063 3496 1.479323 CTCCCTCCGTTCCGAAATGTA 59.521 52.381 0.00 0.00 0.00 2.29
3064 3497 1.479323 TCCCTCCGTTCCGAAATGTAG 59.521 52.381 0.00 0.00 0.00 2.74
3065 3498 1.472728 CCCTCCGTTCCGAAATGTAGG 60.473 57.143 0.00 0.00 0.00 3.18
3066 3499 1.287425 CTCCGTTCCGAAATGTAGGC 58.713 55.000 0.00 0.00 0.00 3.93
3067 3500 0.108041 TCCGTTCCGAAATGTAGGCC 60.108 55.000 0.00 0.00 0.00 5.19
3068 3501 0.107848 CCGTTCCGAAATGTAGGCCT 60.108 55.000 11.78 11.78 0.00 5.19
3069 3502 1.677820 CCGTTCCGAAATGTAGGCCTT 60.678 52.381 12.58 0.00 0.00 4.35
3070 3503 2.081462 CGTTCCGAAATGTAGGCCTTT 58.919 47.619 12.58 0.00 0.00 3.11
3071 3504 2.159572 CGTTCCGAAATGTAGGCCTTTG 60.160 50.000 12.58 0.00 0.00 2.77
3072 3505 2.817844 GTTCCGAAATGTAGGCCTTTGT 59.182 45.455 12.58 0.00 0.00 2.83
3073 3506 3.985019 TCCGAAATGTAGGCCTTTGTA 57.015 42.857 12.58 0.00 0.00 2.41
3074 3507 3.869065 TCCGAAATGTAGGCCTTTGTAG 58.131 45.455 12.58 0.00 0.00 2.74
3075 3508 3.516300 TCCGAAATGTAGGCCTTTGTAGA 59.484 43.478 12.58 0.00 0.00 2.59
3076 3509 3.871594 CCGAAATGTAGGCCTTTGTAGAG 59.128 47.826 12.58 0.00 0.00 2.43
3077 3510 4.382685 CCGAAATGTAGGCCTTTGTAGAGA 60.383 45.833 12.58 0.00 0.00 3.10
3078 3511 5.360591 CGAAATGTAGGCCTTTGTAGAGAT 58.639 41.667 12.58 0.00 0.00 2.75
3079 3512 5.817816 CGAAATGTAGGCCTTTGTAGAGATT 59.182 40.000 12.58 0.00 0.00 2.40
3080 3513 6.018669 CGAAATGTAGGCCTTTGTAGAGATTC 60.019 42.308 12.58 3.26 0.00 2.52
3081 3514 4.755266 TGTAGGCCTTTGTAGAGATTCC 57.245 45.455 12.58 0.00 0.00 3.01
3082 3515 4.101114 TGTAGGCCTTTGTAGAGATTCCA 58.899 43.478 12.58 0.00 0.00 3.53
3083 3516 3.636153 AGGCCTTTGTAGAGATTCCAC 57.364 47.619 0.00 0.00 0.00 4.02
3084 3517 3.185455 AGGCCTTTGTAGAGATTCCACT 58.815 45.455 0.00 0.00 0.00 4.00
3085 3518 4.362677 AGGCCTTTGTAGAGATTCCACTA 58.637 43.478 0.00 0.00 0.00 2.74
3086 3519 4.971924 AGGCCTTTGTAGAGATTCCACTAT 59.028 41.667 0.00 0.00 0.00 2.12
3087 3520 5.071115 AGGCCTTTGTAGAGATTCCACTATC 59.929 44.000 0.00 0.00 0.00 2.08
3088 3521 5.163301 GGCCTTTGTAGAGATTCCACTATCA 60.163 44.000 0.00 0.00 0.00 2.15
3089 3522 6.349300 GCCTTTGTAGAGATTCCACTATCAA 58.651 40.000 0.00 0.00 0.00 2.57
3090 3523 6.258947 GCCTTTGTAGAGATTCCACTATCAAC 59.741 42.308 0.00 0.00 0.00 3.18
3091 3524 7.560368 CCTTTGTAGAGATTCCACTATCAACT 58.440 38.462 0.00 0.00 0.00 3.16
3092 3525 8.696374 CCTTTGTAGAGATTCCACTATCAACTA 58.304 37.037 0.00 0.00 0.00 2.24
3093 3526 9.522804 CTTTGTAGAGATTCCACTATCAACTAC 57.477 37.037 0.00 0.00 37.29 2.73
3094 3527 8.589701 TTGTAGAGATTCCACTATCAACTACA 57.410 34.615 0.00 0.00 40.48 2.74
3095 3528 8.768501 TGTAGAGATTCCACTATCAACTACAT 57.231 34.615 0.00 0.00 39.18 2.29
3096 3529 9.862149 TGTAGAGATTCCACTATCAACTACATA 57.138 33.333 0.00 0.00 39.18 2.29
3099 3532 8.811017 AGAGATTCCACTATCAACTACATATGG 58.189 37.037 7.80 0.00 0.00 2.74
3100 3533 8.727100 AGATTCCACTATCAACTACATATGGA 57.273 34.615 7.80 0.00 33.21 3.41
3101 3534 9.331466 AGATTCCACTATCAACTACATATGGAT 57.669 33.333 7.80 2.39 35.03 3.41
3102 3535 9.376075 GATTCCACTATCAACTACATATGGATG 57.624 37.037 7.80 0.00 35.03 3.51
3104 3537 8.950007 TCCACTATCAACTACATATGGATGTA 57.050 34.615 7.80 0.00 44.77 2.29
3105 3538 9.547279 TCCACTATCAACTACATATGGATGTAT 57.453 33.333 7.80 0.00 45.42 2.29
3133 3566 8.757982 AGATGCATTTTAAGTGTAGATCCATT 57.242 30.769 0.00 0.00 0.00 3.16
3134 3567 8.844244 AGATGCATTTTAAGTGTAGATCCATTC 58.156 33.333 0.00 0.00 0.00 2.67
3135 3568 7.936496 TGCATTTTAAGTGTAGATCCATTCA 57.064 32.000 0.00 0.00 0.00 2.57
3136 3569 8.523915 TGCATTTTAAGTGTAGATCCATTCAT 57.476 30.769 0.00 0.00 0.00 2.57
3137 3570 8.970020 TGCATTTTAAGTGTAGATCCATTCATT 58.030 29.630 0.00 0.00 0.00 2.57
3138 3571 9.807649 GCATTTTAAGTGTAGATCCATTCATTT 57.192 29.630 0.00 0.00 0.00 2.32
3141 3574 9.638239 TTTTAAGTGTAGATCCATTCATTTTGC 57.362 29.630 0.00 0.00 0.00 3.68
3142 3575 8.579850 TTAAGTGTAGATCCATTCATTTTGCT 57.420 30.769 0.00 0.00 0.00 3.91
3143 3576 6.690194 AGTGTAGATCCATTCATTTTGCTC 57.310 37.500 0.00 0.00 0.00 4.26
3144 3577 5.591877 AGTGTAGATCCATTCATTTTGCTCC 59.408 40.000 0.00 0.00 0.00 4.70
3145 3578 4.576053 TGTAGATCCATTCATTTTGCTCCG 59.424 41.667 0.00 0.00 0.00 4.63
3146 3579 3.624777 AGATCCATTCATTTTGCTCCGT 58.375 40.909 0.00 0.00 0.00 4.69
3147 3580 4.780815 AGATCCATTCATTTTGCTCCGTA 58.219 39.130 0.00 0.00 0.00 4.02
3148 3581 5.380043 AGATCCATTCATTTTGCTCCGTAT 58.620 37.500 0.00 0.00 0.00 3.06
3149 3582 4.898829 TCCATTCATTTTGCTCCGTATG 57.101 40.909 0.00 0.00 0.00 2.39
3150 3583 4.269183 TCCATTCATTTTGCTCCGTATGT 58.731 39.130 0.00 0.00 0.00 2.29
3151 3584 5.432645 TCCATTCATTTTGCTCCGTATGTA 58.567 37.500 0.00 0.00 0.00 2.29
3152 3585 5.527214 TCCATTCATTTTGCTCCGTATGTAG 59.473 40.000 0.00 0.00 0.00 2.74
3153 3586 5.296780 CCATTCATTTTGCTCCGTATGTAGT 59.703 40.000 0.00 0.00 0.00 2.73
3154 3587 6.422223 CATTCATTTTGCTCCGTATGTAGTC 58.578 40.000 0.00 0.00 0.00 2.59
3155 3588 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
3156 3589 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
3157 3590 2.953466 TTGCTCCGTATGTAGTCCAC 57.047 50.000 0.00 0.00 0.00 4.02
3158 3591 1.108776 TGCTCCGTATGTAGTCCACC 58.891 55.000 0.00 0.00 0.00 4.61
3159 3592 1.108776 GCTCCGTATGTAGTCCACCA 58.891 55.000 0.00 0.00 0.00 4.17
3160 3593 1.479323 GCTCCGTATGTAGTCCACCAA 59.521 52.381 0.00 0.00 0.00 3.67
3161 3594 2.481449 GCTCCGTATGTAGTCCACCAAG 60.481 54.545 0.00 0.00 0.00 3.61
3162 3595 2.758979 CTCCGTATGTAGTCCACCAAGT 59.241 50.000 0.00 0.00 0.00 3.16
3163 3596 2.494471 TCCGTATGTAGTCCACCAAGTG 59.506 50.000 0.00 0.00 0.00 3.16
3164 3597 2.494471 CCGTATGTAGTCCACCAAGTGA 59.506 50.000 0.00 0.00 35.23 3.41
3165 3598 3.056393 CCGTATGTAGTCCACCAAGTGAA 60.056 47.826 0.00 0.00 35.23 3.18
3166 3599 4.561938 CCGTATGTAGTCCACCAAGTGAAA 60.562 45.833 0.00 0.00 35.23 2.69
3167 3600 5.175859 CGTATGTAGTCCACCAAGTGAAAT 58.824 41.667 0.00 0.00 35.23 2.17
3168 3601 5.291128 CGTATGTAGTCCACCAAGTGAAATC 59.709 44.000 0.00 0.00 35.23 2.17
3169 3602 4.974645 TGTAGTCCACCAAGTGAAATCT 57.025 40.909 0.00 0.00 35.23 2.40
3170 3603 4.894784 TGTAGTCCACCAAGTGAAATCTC 58.105 43.478 0.00 0.00 35.23 2.75
3171 3604 4.593206 TGTAGTCCACCAAGTGAAATCTCT 59.407 41.667 0.00 0.00 35.23 3.10
3172 3605 5.778241 TGTAGTCCACCAAGTGAAATCTCTA 59.222 40.000 0.00 0.00 35.23 2.43
3173 3606 5.153950 AGTCCACCAAGTGAAATCTCTAC 57.846 43.478 0.00 0.00 35.23 2.59
3174 3607 4.593206 AGTCCACCAAGTGAAATCTCTACA 59.407 41.667 0.00 0.00 35.23 2.74
3175 3608 5.071788 AGTCCACCAAGTGAAATCTCTACAA 59.928 40.000 0.00 0.00 35.23 2.41
3176 3609 5.763204 GTCCACCAAGTGAAATCTCTACAAA 59.237 40.000 0.00 0.00 35.23 2.83
3177 3610 5.997746 TCCACCAAGTGAAATCTCTACAAAG 59.002 40.000 0.00 0.00 35.23 2.77
3178 3611 5.997746 CCACCAAGTGAAATCTCTACAAAGA 59.002 40.000 0.00 0.00 35.23 2.52
3179 3612 6.073003 CCACCAAGTGAAATCTCTACAAAGAC 60.073 42.308 0.00 0.00 35.23 3.01
3180 3613 6.708054 CACCAAGTGAAATCTCTACAAAGACT 59.292 38.462 0.00 0.00 35.23 3.24
3181 3614 7.227512 CACCAAGTGAAATCTCTACAAAGACTT 59.772 37.037 0.00 0.00 35.23 3.01
3182 3615 8.429641 ACCAAGTGAAATCTCTACAAAGACTTA 58.570 33.333 0.00 0.00 0.00 2.24
3183 3616 9.442047 CCAAGTGAAATCTCTACAAAGACTTAT 57.558 33.333 0.00 0.00 0.00 1.73
3197 3630 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
3198 3631 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
3199 3632 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
3200 3633 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
3201 3634 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
3202 3635 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
3203 3636 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
3204 3637 7.786464 ACTTATATTTAGGAACGGAGGGAGTAA 59.214 37.037 0.00 0.00 0.00 2.24
3205 3638 8.731591 TTATATTTAGGAACGGAGGGAGTAAT 57.268 34.615 0.00 0.00 0.00 1.89
3206 3639 9.827198 TTATATTTAGGAACGGAGGGAGTAATA 57.173 33.333 0.00 0.00 0.00 0.98
3207 3640 8.912614 ATATTTAGGAACGGAGGGAGTAATAT 57.087 34.615 0.00 0.00 0.00 1.28
3208 3641 6.415206 TTTAGGAACGGAGGGAGTAATATG 57.585 41.667 0.00 0.00 0.00 1.78
3209 3642 3.240302 AGGAACGGAGGGAGTAATATGG 58.760 50.000 0.00 0.00 0.00 2.74
3210 3643 2.970640 GGAACGGAGGGAGTAATATGGT 59.029 50.000 0.00 0.00 0.00 3.55
3211 3644 4.140853 AGGAACGGAGGGAGTAATATGGTA 60.141 45.833 0.00 0.00 0.00 3.25
3212 3645 4.776308 GGAACGGAGGGAGTAATATGGTAT 59.224 45.833 0.00 0.00 0.00 2.73
3213 3646 5.337330 GGAACGGAGGGAGTAATATGGTATG 60.337 48.000 0.00 0.00 0.00 2.39
3214 3647 4.748701 ACGGAGGGAGTAATATGGTATGT 58.251 43.478 0.00 0.00 0.00 2.29
3215 3648 5.895807 ACGGAGGGAGTAATATGGTATGTA 58.104 41.667 0.00 0.00 0.00 2.29
3216 3649 6.500336 ACGGAGGGAGTAATATGGTATGTAT 58.500 40.000 0.00 0.00 0.00 2.29
3217 3650 6.380274 ACGGAGGGAGTAATATGGTATGTATG 59.620 42.308 0.00 0.00 0.00 2.39
3218 3651 6.380274 CGGAGGGAGTAATATGGTATGTATGT 59.620 42.308 0.00 0.00 0.00 2.29
3219 3652 7.556844 GGAGGGAGTAATATGGTATGTATGTG 58.443 42.308 0.00 0.00 0.00 3.21
3220 3653 7.180408 GGAGGGAGTAATATGGTATGTATGTGT 59.820 40.741 0.00 0.00 0.00 3.72
3221 3654 8.506196 AGGGAGTAATATGGTATGTATGTGTT 57.494 34.615 0.00 0.00 0.00 3.32
3222 3655 8.375506 AGGGAGTAATATGGTATGTATGTGTTG 58.624 37.037 0.00 0.00 0.00 3.33
3223 3656 8.372459 GGGAGTAATATGGTATGTATGTGTTGA 58.628 37.037 0.00 0.00 0.00 3.18
3224 3657 9.944376 GGAGTAATATGGTATGTATGTGTTGAT 57.056 33.333 0.00 0.00 0.00 2.57
3226 3659 9.725019 AGTAATATGGTATGTATGTGTTGATGG 57.275 33.333 0.00 0.00 0.00 3.51
3227 3660 9.502091 GTAATATGGTATGTATGTGTTGATGGT 57.498 33.333 0.00 0.00 0.00 3.55
3228 3661 7.984422 ATATGGTATGTATGTGTTGATGGTG 57.016 36.000 0.00 0.00 0.00 4.17
3229 3662 5.172687 TGGTATGTATGTGTTGATGGTGT 57.827 39.130 0.00 0.00 0.00 4.16
3230 3663 4.940654 TGGTATGTATGTGTTGATGGTGTG 59.059 41.667 0.00 0.00 0.00 3.82
3231 3664 5.182487 GGTATGTATGTGTTGATGGTGTGA 58.818 41.667 0.00 0.00 0.00 3.58
3232 3665 5.064707 GGTATGTATGTGTTGATGGTGTGAC 59.935 44.000 0.00 0.00 0.00 3.67
3233 3666 4.350368 TGTATGTGTTGATGGTGTGACT 57.650 40.909 0.00 0.00 0.00 3.41
3234 3667 4.064388 TGTATGTGTTGATGGTGTGACTG 58.936 43.478 0.00 0.00 0.00 3.51
3235 3668 1.965935 TGTGTTGATGGTGTGACTGG 58.034 50.000 0.00 0.00 0.00 4.00
3236 3669 1.488393 TGTGTTGATGGTGTGACTGGA 59.512 47.619 0.00 0.00 0.00 3.86
3237 3670 2.106338 TGTGTTGATGGTGTGACTGGAT 59.894 45.455 0.00 0.00 0.00 3.41
3238 3671 3.326297 TGTGTTGATGGTGTGACTGGATA 59.674 43.478 0.00 0.00 0.00 2.59
3239 3672 4.202409 TGTGTTGATGGTGTGACTGGATAA 60.202 41.667 0.00 0.00 0.00 1.75
3240 3673 4.943705 GTGTTGATGGTGTGACTGGATAAT 59.056 41.667 0.00 0.00 0.00 1.28
3241 3674 5.065218 GTGTTGATGGTGTGACTGGATAATC 59.935 44.000 0.00 0.00 0.00 1.75
3242 3675 4.058721 TGATGGTGTGACTGGATAATCG 57.941 45.455 0.00 0.00 0.00 3.34
3243 3676 3.704061 TGATGGTGTGACTGGATAATCGA 59.296 43.478 0.00 0.00 0.00 3.59
3244 3677 4.344968 TGATGGTGTGACTGGATAATCGAT 59.655 41.667 0.00 0.00 0.00 3.59
3245 3678 4.058721 TGGTGTGACTGGATAATCGATG 57.941 45.455 0.00 0.00 0.00 3.84
3246 3679 3.450817 TGGTGTGACTGGATAATCGATGT 59.549 43.478 0.00 0.00 0.00 3.06
3247 3680 4.081142 TGGTGTGACTGGATAATCGATGTT 60.081 41.667 0.00 0.00 0.00 2.71
3248 3681 4.271049 GGTGTGACTGGATAATCGATGTTG 59.729 45.833 0.00 0.00 0.00 3.33
3249 3682 4.271049 GTGTGACTGGATAATCGATGTTGG 59.729 45.833 0.00 0.00 0.00 3.77
3250 3683 4.081142 TGTGACTGGATAATCGATGTTGGT 60.081 41.667 0.00 0.00 0.00 3.67
3251 3684 4.271049 GTGACTGGATAATCGATGTTGGTG 59.729 45.833 0.00 0.00 0.00 4.17
3252 3685 3.808728 ACTGGATAATCGATGTTGGTGG 58.191 45.455 0.00 0.00 0.00 4.61
3253 3686 3.199946 ACTGGATAATCGATGTTGGTGGT 59.800 43.478 0.00 0.00 0.00 4.16
3254 3687 3.540617 TGGATAATCGATGTTGGTGGTG 58.459 45.455 0.00 0.00 0.00 4.17
3255 3688 3.198853 TGGATAATCGATGTTGGTGGTGA 59.801 43.478 0.00 0.00 0.00 4.02
3256 3689 3.809832 GGATAATCGATGTTGGTGGTGAG 59.190 47.826 0.00 0.00 0.00 3.51
3257 3690 4.442893 GGATAATCGATGTTGGTGGTGAGA 60.443 45.833 0.00 0.00 0.00 3.27
3258 3691 2.680312 ATCGATGTTGGTGGTGAGAG 57.320 50.000 0.00 0.00 0.00 3.20
3259 3692 0.037326 TCGATGTTGGTGGTGAGAGC 60.037 55.000 0.00 0.00 0.00 4.09
3260 3693 0.320683 CGATGTTGGTGGTGAGAGCA 60.321 55.000 0.00 0.00 0.00 4.26
3261 3694 1.676916 CGATGTTGGTGGTGAGAGCAT 60.677 52.381 0.00 0.00 0.00 3.79
3262 3695 2.418609 CGATGTTGGTGGTGAGAGCATA 60.419 50.000 0.00 0.00 0.00 3.14
3263 3696 3.609853 GATGTTGGTGGTGAGAGCATAA 58.390 45.455 0.00 0.00 0.00 1.90
3264 3697 3.719268 TGTTGGTGGTGAGAGCATAAT 57.281 42.857 0.00 0.00 0.00 1.28
3265 3698 3.609853 TGTTGGTGGTGAGAGCATAATC 58.390 45.455 0.00 0.00 0.00 1.75
3266 3699 2.602257 TGGTGGTGAGAGCATAATCG 57.398 50.000 0.00 0.00 0.00 3.34
3267 3700 2.107366 TGGTGGTGAGAGCATAATCGA 58.893 47.619 0.00 0.00 0.00 3.59
3268 3701 2.700371 TGGTGGTGAGAGCATAATCGAT 59.300 45.455 0.00 0.00 0.00 3.59
3269 3702 3.062763 GGTGGTGAGAGCATAATCGATG 58.937 50.000 0.00 0.00 38.73 3.84
3270 3703 3.493350 GGTGGTGAGAGCATAATCGATGT 60.493 47.826 0.00 0.00 37.90 3.06
3271 3704 4.122776 GTGGTGAGAGCATAATCGATGTT 58.877 43.478 0.00 0.00 37.90 2.71
3272 3705 4.572389 GTGGTGAGAGCATAATCGATGTTT 59.428 41.667 0.00 0.00 37.90 2.83
3273 3706 5.753438 GTGGTGAGAGCATAATCGATGTTTA 59.247 40.000 0.00 0.00 37.90 2.01
3274 3707 5.985530 TGGTGAGAGCATAATCGATGTTTAG 59.014 40.000 0.00 0.00 37.90 1.85
3275 3708 5.986135 GGTGAGAGCATAATCGATGTTTAGT 59.014 40.000 0.00 0.00 37.90 2.24
3276 3709 6.480320 GGTGAGAGCATAATCGATGTTTAGTT 59.520 38.462 0.00 0.00 37.90 2.24
3277 3710 7.011482 GGTGAGAGCATAATCGATGTTTAGTTT 59.989 37.037 0.00 0.00 37.90 2.66
3278 3711 8.058915 GTGAGAGCATAATCGATGTTTAGTTTC 58.941 37.037 0.00 0.00 37.90 2.78
3279 3712 7.981789 TGAGAGCATAATCGATGTTTAGTTTCT 59.018 33.333 0.00 0.00 37.90 2.52
3280 3713 8.136057 AGAGCATAATCGATGTTTAGTTTCTG 57.864 34.615 0.00 0.00 37.90 3.02
3281 3714 7.766278 AGAGCATAATCGATGTTTAGTTTCTGT 59.234 33.333 0.00 0.00 37.90 3.41
3282 3715 7.688372 AGCATAATCGATGTTTAGTTTCTGTG 58.312 34.615 0.00 0.00 37.90 3.66
3283 3716 6.412072 GCATAATCGATGTTTAGTTTCTGTGC 59.588 38.462 0.00 0.00 37.90 4.57
3284 3717 5.940192 AATCGATGTTTAGTTTCTGTGCA 57.060 34.783 0.00 0.00 0.00 4.57
3285 3718 5.940192 ATCGATGTTTAGTTTCTGTGCAA 57.060 34.783 0.00 0.00 0.00 4.08
3286 3719 5.940192 TCGATGTTTAGTTTCTGTGCAAT 57.060 34.783 0.00 0.00 0.00 3.56
3287 3720 6.312399 TCGATGTTTAGTTTCTGTGCAATT 57.688 33.333 0.00 0.00 0.00 2.32
3288 3721 7.428282 TCGATGTTTAGTTTCTGTGCAATTA 57.572 32.000 0.00 0.00 0.00 1.40
3289 3722 7.518161 TCGATGTTTAGTTTCTGTGCAATTAG 58.482 34.615 0.00 0.00 0.00 1.73
3290 3723 7.172532 TCGATGTTTAGTTTCTGTGCAATTAGT 59.827 33.333 0.00 0.00 0.00 2.24
3291 3724 8.440059 CGATGTTTAGTTTCTGTGCAATTAGTA 58.560 33.333 0.00 0.00 0.00 1.82
3294 3727 8.020819 TGTTTAGTTTCTGTGCAATTAGTATGC 58.979 33.333 0.00 0.00 44.08 3.14
3295 3728 7.921786 TTAGTTTCTGTGCAATTAGTATGCT 57.078 32.000 0.00 0.00 44.14 3.79
3296 3729 6.187125 AGTTTCTGTGCAATTAGTATGCTG 57.813 37.500 0.00 0.00 44.14 4.41
3297 3730 5.939883 AGTTTCTGTGCAATTAGTATGCTGA 59.060 36.000 0.00 0.00 44.14 4.26
3298 3731 6.600822 AGTTTCTGTGCAATTAGTATGCTGAT 59.399 34.615 0.00 0.00 44.14 2.90
3299 3732 7.121759 AGTTTCTGTGCAATTAGTATGCTGATT 59.878 33.333 0.00 0.00 44.14 2.57
3300 3733 8.397906 GTTTCTGTGCAATTAGTATGCTGATTA 58.602 33.333 0.52 0.00 44.14 1.75
3301 3734 7.482654 TCTGTGCAATTAGTATGCTGATTAC 57.517 36.000 0.52 0.00 44.14 1.89
3302 3735 6.200854 TCTGTGCAATTAGTATGCTGATTACG 59.799 38.462 0.52 0.00 44.14 3.18
3303 3736 5.236263 TGTGCAATTAGTATGCTGATTACGG 59.764 40.000 0.52 0.00 44.14 4.02
3312 3745 2.873133 GCTGATTACGGCTCTGTACT 57.127 50.000 0.00 0.00 44.22 2.73
3313 3746 3.984508 GCTGATTACGGCTCTGTACTA 57.015 47.619 0.00 0.00 44.22 1.82
3314 3747 4.303086 GCTGATTACGGCTCTGTACTAA 57.697 45.455 0.00 0.00 44.22 2.24
3315 3748 4.872664 GCTGATTACGGCTCTGTACTAAT 58.127 43.478 0.00 0.00 44.22 1.73
3316 3749 4.681942 GCTGATTACGGCTCTGTACTAATG 59.318 45.833 0.00 0.00 44.22 1.90
3317 3750 5.736492 GCTGATTACGGCTCTGTACTAATGT 60.736 44.000 0.00 0.00 44.22 2.71
3318 3751 6.216801 TGATTACGGCTCTGTACTAATGTT 57.783 37.500 0.00 0.00 0.00 2.71
3319 3752 6.270815 TGATTACGGCTCTGTACTAATGTTC 58.729 40.000 0.00 0.00 0.00 3.18
3320 3753 3.521947 ACGGCTCTGTACTAATGTTCC 57.478 47.619 0.00 0.00 0.00 3.62
3321 3754 3.097614 ACGGCTCTGTACTAATGTTCCT 58.902 45.455 0.00 0.00 0.00 3.36
3322 3755 3.130693 ACGGCTCTGTACTAATGTTCCTC 59.869 47.826 0.00 0.00 0.00 3.71
3323 3756 3.130516 CGGCTCTGTACTAATGTTCCTCA 59.869 47.826 0.00 0.00 0.00 3.86
3324 3757 4.381612 CGGCTCTGTACTAATGTTCCTCAA 60.382 45.833 0.00 0.00 0.00 3.02
3325 3758 5.488341 GGCTCTGTACTAATGTTCCTCAAA 58.512 41.667 0.00 0.00 0.00 2.69
3326 3759 5.938125 GGCTCTGTACTAATGTTCCTCAAAA 59.062 40.000 0.00 0.00 0.00 2.44
3327 3760 6.430000 GGCTCTGTACTAATGTTCCTCAAAAA 59.570 38.462 0.00 0.00 0.00 1.94
3349 3782 7.839680 AAAAATCAGTGAGGTATTTGGAACT 57.160 32.000 0.00 0.00 0.00 3.01
3350 3783 8.934023 AAAAATCAGTGAGGTATTTGGAACTA 57.066 30.769 0.00 0.00 0.00 2.24
3351 3784 8.934023 AAAATCAGTGAGGTATTTGGAACTAA 57.066 30.769 0.00 0.00 0.00 2.24
3352 3785 9.533831 AAAATCAGTGAGGTATTTGGAACTAAT 57.466 29.630 0.00 0.00 0.00 1.73
3353 3786 8.511604 AATCAGTGAGGTATTTGGAACTAATG 57.488 34.615 0.00 0.00 0.00 1.90
3354 3787 7.016153 TCAGTGAGGTATTTGGAACTAATGT 57.984 36.000 0.00 0.00 0.00 2.71
3355 3788 8.141298 TCAGTGAGGTATTTGGAACTAATGTA 57.859 34.615 0.00 0.00 0.00 2.29
3356 3789 8.598916 TCAGTGAGGTATTTGGAACTAATGTAA 58.401 33.333 0.00 0.00 0.00 2.41
3357 3790 9.226606 CAGTGAGGTATTTGGAACTAATGTAAA 57.773 33.333 0.00 0.00 0.00 2.01
3358 3791 9.802039 AGTGAGGTATTTGGAACTAATGTAAAA 57.198 29.630 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
713 718 0.404426 GGTAAGAACCCAGGCTTGGT 59.596 55.000 14.60 4.05 43.40 3.67
1074 1080 3.446507 CCACATTTGGGCAGCAATC 57.553 52.632 0.00 0.00 39.57 2.67
1889 2134 6.016860 GCCATAGCATGATAGTGTTCAATTGA 60.017 38.462 3.38 3.38 39.53 2.57
2491 2767 3.440173 GTGCACTACAGCCATACATGTTT 59.560 43.478 10.32 0.00 0.00 2.83
2575 2880 7.289573 GGTACATCCAAAAGCAATCAGCACA 62.290 44.000 0.00 0.00 40.25 4.57
2608 3029 5.704053 TCATAAGATGGCAATCATGTAGCAG 59.296 40.000 3.34 0.00 35.97 4.24
2691 3112 6.483385 TTTTGGCAGCATTTCATTTGTATG 57.517 33.333 0.00 0.00 0.00 2.39
2726 3147 3.895041 TGGTTTGGAAGAATGGAAGAACC 59.105 43.478 0.00 0.00 36.66 3.62
2880 3313 1.766143 GCAATCTACGCGCCCTTCAG 61.766 60.000 5.73 0.00 0.00 3.02
2883 3316 2.513897 GGCAATCTACGCGCCCTT 60.514 61.111 5.73 0.00 40.07 3.95
2884 3317 2.996168 GATGGCAATCTACGCGCCCT 62.996 60.000 5.73 0.00 45.63 5.19
2885 3318 2.591715 ATGGCAATCTACGCGCCC 60.592 61.111 5.73 0.00 45.63 6.13
2886 3319 1.887242 TGATGGCAATCTACGCGCC 60.887 57.895 5.73 0.00 46.43 6.53
2887 3320 1.276844 GTGATGGCAATCTACGCGC 59.723 57.895 5.73 0.00 33.61 6.86
2888 3321 0.869880 TCGTGATGGCAATCTACGCG 60.870 55.000 16.52 3.53 37.30 6.01
2889 3322 1.193203 CATCGTGATGGCAATCTACGC 59.807 52.381 16.52 0.26 37.30 4.42
2890 3323 2.728318 CTCATCGTGATGGCAATCTACG 59.272 50.000 15.66 15.66 39.24 3.51
2891 3324 3.982475 TCTCATCGTGATGGCAATCTAC 58.018 45.455 9.81 0.00 39.24 2.59
2892 3325 3.638627 ACTCTCATCGTGATGGCAATCTA 59.361 43.478 9.81 0.00 39.24 1.98
2893 3326 2.433604 ACTCTCATCGTGATGGCAATCT 59.566 45.455 9.81 0.00 39.24 2.40
2894 3327 2.831333 ACTCTCATCGTGATGGCAATC 58.169 47.619 9.81 0.00 39.24 2.67
2895 3328 2.996249 ACTCTCATCGTGATGGCAAT 57.004 45.000 9.81 0.00 39.24 3.56
2896 3329 2.760650 AGTACTCTCATCGTGATGGCAA 59.239 45.455 9.81 0.00 39.24 4.52
2897 3330 2.099756 CAGTACTCTCATCGTGATGGCA 59.900 50.000 9.81 0.00 39.24 4.92
2898 3331 2.736978 CAGTACTCTCATCGTGATGGC 58.263 52.381 9.81 0.00 39.24 4.40
2899 3332 2.544694 GGCAGTACTCTCATCGTGATGG 60.545 54.545 9.81 1.76 39.24 3.51
2900 3333 2.736978 GGCAGTACTCTCATCGTGATG 58.263 52.381 3.41 3.41 40.09 3.07
2901 3334 1.335182 CGGCAGTACTCTCATCGTGAT 59.665 52.381 0.00 0.00 0.00 3.06
2902 3335 0.733150 CGGCAGTACTCTCATCGTGA 59.267 55.000 0.00 0.00 0.00 4.35
2903 3336 0.733150 TCGGCAGTACTCTCATCGTG 59.267 55.000 0.00 0.00 0.00 4.35
2904 3337 1.335182 CATCGGCAGTACTCTCATCGT 59.665 52.381 0.00 0.00 0.00 3.73
2905 3338 1.604278 TCATCGGCAGTACTCTCATCG 59.396 52.381 0.00 0.00 0.00 3.84
2906 3339 3.573598 CATCATCGGCAGTACTCTCATC 58.426 50.000 0.00 0.00 0.00 2.92
2907 3340 2.288702 GCATCATCGGCAGTACTCTCAT 60.289 50.000 0.00 0.00 0.00 2.90
2908 3341 1.067669 GCATCATCGGCAGTACTCTCA 59.932 52.381 0.00 0.00 0.00 3.27
2909 3342 1.777101 GCATCATCGGCAGTACTCTC 58.223 55.000 0.00 0.00 0.00 3.20
2910 3343 0.031314 CGCATCATCGGCAGTACTCT 59.969 55.000 0.00 0.00 0.00 3.24
2911 3344 0.941463 CCGCATCATCGGCAGTACTC 60.941 60.000 0.00 0.00 43.18 2.59
2912 3345 1.068083 CCGCATCATCGGCAGTACT 59.932 57.895 0.00 0.00 43.18 2.73
2913 3346 3.630204 CCGCATCATCGGCAGTAC 58.370 61.111 0.00 0.00 43.18 2.73
2920 3353 1.289800 CTCCAGCATCCGCATCATCG 61.290 60.000 0.00 0.00 42.27 3.84
2921 3354 0.954449 CCTCCAGCATCCGCATCATC 60.954 60.000 0.00 0.00 42.27 2.92
2922 3355 1.072678 CCTCCAGCATCCGCATCAT 59.927 57.895 0.00 0.00 42.27 2.45
2923 3356 2.315781 GACCTCCAGCATCCGCATCA 62.316 60.000 0.00 0.00 42.27 3.07
2924 3357 1.596477 GACCTCCAGCATCCGCATC 60.596 63.158 0.00 0.00 42.27 3.91
2925 3358 2.321263 CTGACCTCCAGCATCCGCAT 62.321 60.000 0.00 0.00 42.27 4.73
2926 3359 3.002583 TGACCTCCAGCATCCGCA 61.003 61.111 0.00 0.00 42.27 5.69
2927 3360 2.202987 CTGACCTCCAGCATCCGC 60.203 66.667 0.00 0.00 35.89 5.54
2928 3361 2.503061 CCTGACCTCCAGCATCCG 59.497 66.667 0.00 0.00 41.57 4.18
2929 3362 2.191641 GCCTGACCTCCAGCATCC 59.808 66.667 0.00 0.00 41.57 3.51
2930 3363 1.153208 CAGCCTGACCTCCAGCATC 60.153 63.158 0.00 0.00 41.57 3.91
2931 3364 0.987081 ATCAGCCTGACCTCCAGCAT 60.987 55.000 0.00 0.00 41.57 3.79
2932 3365 1.614525 ATCAGCCTGACCTCCAGCA 60.615 57.895 0.00 0.00 41.57 4.41
2933 3366 1.153208 CATCAGCCTGACCTCCAGC 60.153 63.158 0.00 0.00 41.57 4.85
2934 3367 0.107800 CACATCAGCCTGACCTCCAG 60.108 60.000 0.00 0.00 42.55 3.86
2935 3368 0.837691 ACACATCAGCCTGACCTCCA 60.838 55.000 0.00 0.00 0.00 3.86
2936 3369 0.326264 AACACATCAGCCTGACCTCC 59.674 55.000 0.00 0.00 0.00 4.30
2937 3370 1.002430 TCAACACATCAGCCTGACCTC 59.998 52.381 0.00 0.00 0.00 3.85
2938 3371 1.002888 CTCAACACATCAGCCTGACCT 59.997 52.381 0.00 0.00 0.00 3.85
2939 3372 1.446907 CTCAACACATCAGCCTGACC 58.553 55.000 0.00 0.00 0.00 4.02
2940 3373 1.446907 CCTCAACACATCAGCCTGAC 58.553 55.000 0.00 0.00 0.00 3.51
2941 3374 0.325933 CCCTCAACACATCAGCCTGA 59.674 55.000 0.00 0.00 0.00 3.86
2942 3375 0.037303 ACCCTCAACACATCAGCCTG 59.963 55.000 0.00 0.00 0.00 4.85
2943 3376 0.773644 AACCCTCAACACATCAGCCT 59.226 50.000 0.00 0.00 0.00 4.58
2944 3377 0.883833 CAACCCTCAACACATCAGCC 59.116 55.000 0.00 0.00 0.00 4.85
2945 3378 0.883833 CCAACCCTCAACACATCAGC 59.116 55.000 0.00 0.00 0.00 4.26
2946 3379 2.038952 TCTCCAACCCTCAACACATCAG 59.961 50.000 0.00 0.00 0.00 2.90
2947 3380 2.054021 TCTCCAACCCTCAACACATCA 58.946 47.619 0.00 0.00 0.00 3.07
2948 3381 2.859165 TCTCCAACCCTCAACACATC 57.141 50.000 0.00 0.00 0.00 3.06
2949 3382 2.291153 CCATCTCCAACCCTCAACACAT 60.291 50.000 0.00 0.00 0.00 3.21
2950 3383 1.073763 CCATCTCCAACCCTCAACACA 59.926 52.381 0.00 0.00 0.00 3.72
2951 3384 1.073923 ACCATCTCCAACCCTCAACAC 59.926 52.381 0.00 0.00 0.00 3.32
2952 3385 1.073763 CACCATCTCCAACCCTCAACA 59.926 52.381 0.00 0.00 0.00 3.33
2953 3386 1.073923 ACACCATCTCCAACCCTCAAC 59.926 52.381 0.00 0.00 0.00 3.18
2954 3387 1.351017 GACACCATCTCCAACCCTCAA 59.649 52.381 0.00 0.00 0.00 3.02
2955 3388 0.984230 GACACCATCTCCAACCCTCA 59.016 55.000 0.00 0.00 0.00 3.86
2956 3389 1.280457 AGACACCATCTCCAACCCTC 58.720 55.000 0.00 0.00 28.16 4.30
2957 3390 2.642171 TAGACACCATCTCCAACCCT 57.358 50.000 0.00 0.00 39.04 4.34
2958 3391 3.933861 AATAGACACCATCTCCAACCC 57.066 47.619 0.00 0.00 39.04 4.11
2959 3392 4.202367 CCCTAATAGACACCATCTCCAACC 60.202 50.000 0.00 0.00 39.04 3.77
2960 3393 4.743955 GCCCTAATAGACACCATCTCCAAC 60.744 50.000 0.00 0.00 39.04 3.77
2961 3394 3.391296 GCCCTAATAGACACCATCTCCAA 59.609 47.826 0.00 0.00 39.04 3.53
2962 3395 2.972713 GCCCTAATAGACACCATCTCCA 59.027 50.000 0.00 0.00 39.04 3.86
2963 3396 3.007398 CAGCCCTAATAGACACCATCTCC 59.993 52.174 0.00 0.00 39.04 3.71
2964 3397 3.643792 ACAGCCCTAATAGACACCATCTC 59.356 47.826 0.00 0.00 39.04 2.75
2965 3398 3.389329 CACAGCCCTAATAGACACCATCT 59.611 47.826 0.00 0.00 41.95 2.90
2966 3399 3.733337 CACAGCCCTAATAGACACCATC 58.267 50.000 0.00 0.00 0.00 3.51
2967 3400 2.158755 GCACAGCCCTAATAGACACCAT 60.159 50.000 0.00 0.00 0.00 3.55
2968 3401 1.209504 GCACAGCCCTAATAGACACCA 59.790 52.381 0.00 0.00 0.00 4.17
2969 3402 1.486726 AGCACAGCCCTAATAGACACC 59.513 52.381 0.00 0.00 0.00 4.16
2970 3403 2.555199 CAGCACAGCCCTAATAGACAC 58.445 52.381 0.00 0.00 0.00 3.67
2971 3404 1.134401 GCAGCACAGCCCTAATAGACA 60.134 52.381 0.00 0.00 0.00 3.41
2972 3405 1.134401 TGCAGCACAGCCCTAATAGAC 60.134 52.381 0.00 0.00 0.00 2.59
2973 3406 1.203237 TGCAGCACAGCCCTAATAGA 58.797 50.000 0.00 0.00 0.00 1.98
2974 3407 1.672881 GTTGCAGCACAGCCCTAATAG 59.327 52.381 0.00 0.00 0.00 1.73
2975 3408 1.281867 AGTTGCAGCACAGCCCTAATA 59.718 47.619 2.55 0.00 0.00 0.98
2976 3409 0.038744 AGTTGCAGCACAGCCCTAAT 59.961 50.000 2.55 0.00 0.00 1.73
2977 3410 0.178992 AAGTTGCAGCACAGCCCTAA 60.179 50.000 2.55 0.00 0.00 2.69
2978 3411 0.890542 CAAGTTGCAGCACAGCCCTA 60.891 55.000 2.55 0.00 0.00 3.53
2979 3412 2.196776 AAGTTGCAGCACAGCCCT 59.803 55.556 2.55 0.00 0.00 5.19
2980 3413 1.737355 TTCAAGTTGCAGCACAGCCC 61.737 55.000 2.55 0.00 0.00 5.19
2981 3414 0.102844 TTTCAAGTTGCAGCACAGCC 59.897 50.000 2.55 0.00 0.00 4.85
2982 3415 1.925229 TTTTCAAGTTGCAGCACAGC 58.075 45.000 2.55 0.00 0.00 4.40
2983 3416 4.232221 CCTATTTTCAAGTTGCAGCACAG 58.768 43.478 2.55 0.00 0.00 3.66
2984 3417 3.552684 GCCTATTTTCAAGTTGCAGCACA 60.553 43.478 2.55 0.00 0.00 4.57
2985 3418 2.989166 GCCTATTTTCAAGTTGCAGCAC 59.011 45.455 2.55 0.00 0.00 4.40
2986 3419 2.892852 AGCCTATTTTCAAGTTGCAGCA 59.107 40.909 2.55 0.00 0.00 4.41
2987 3420 3.505836 GAGCCTATTTTCAAGTTGCAGC 58.494 45.455 0.00 0.00 0.00 5.25
2988 3421 3.189287 ACGAGCCTATTTTCAAGTTGCAG 59.811 43.478 0.00 0.00 0.00 4.41
2989 3422 3.058293 CACGAGCCTATTTTCAAGTTGCA 60.058 43.478 0.00 0.00 0.00 4.08
2990 3423 3.492313 CACGAGCCTATTTTCAAGTTGC 58.508 45.455 0.00 0.00 0.00 4.17
2991 3424 3.502211 ACCACGAGCCTATTTTCAAGTTG 59.498 43.478 0.00 0.00 0.00 3.16
2992 3425 3.751518 ACCACGAGCCTATTTTCAAGTT 58.248 40.909 0.00 0.00 0.00 2.66
2993 3426 3.418684 ACCACGAGCCTATTTTCAAGT 57.581 42.857 0.00 0.00 0.00 3.16
2994 3427 4.876107 ACATACCACGAGCCTATTTTCAAG 59.124 41.667 0.00 0.00 0.00 3.02
2995 3428 4.839121 ACATACCACGAGCCTATTTTCAA 58.161 39.130 0.00 0.00 0.00 2.69
2996 3429 4.481368 ACATACCACGAGCCTATTTTCA 57.519 40.909 0.00 0.00 0.00 2.69
2997 3430 5.989777 ACATACATACCACGAGCCTATTTTC 59.010 40.000 0.00 0.00 0.00 2.29
2998 3431 5.925509 ACATACATACCACGAGCCTATTTT 58.074 37.500 0.00 0.00 0.00 1.82
2999 3432 5.546621 ACATACATACCACGAGCCTATTT 57.453 39.130 0.00 0.00 0.00 1.40
3000 3433 5.773680 ACTACATACATACCACGAGCCTATT 59.226 40.000 0.00 0.00 0.00 1.73
3001 3434 5.322754 ACTACATACATACCACGAGCCTAT 58.677 41.667 0.00 0.00 0.00 2.57
3002 3435 4.722220 ACTACATACATACCACGAGCCTA 58.278 43.478 0.00 0.00 0.00 3.93
3003 3436 3.563223 ACTACATACATACCACGAGCCT 58.437 45.455 0.00 0.00 0.00 4.58
3004 3437 4.082895 CCTACTACATACATACCACGAGCC 60.083 50.000 0.00 0.00 0.00 4.70
3005 3438 4.082895 CCCTACTACATACATACCACGAGC 60.083 50.000 0.00 0.00 0.00 5.03
3006 3439 5.048921 CACCCTACTACATACATACCACGAG 60.049 48.000 0.00 0.00 0.00 4.18
3007 3440 4.823442 CACCCTACTACATACATACCACGA 59.177 45.833 0.00 0.00 0.00 4.35
3008 3441 4.558095 GCACCCTACTACATACATACCACG 60.558 50.000 0.00 0.00 0.00 4.94
3009 3442 4.587684 AGCACCCTACTACATACATACCAC 59.412 45.833 0.00 0.00 0.00 4.16
3010 3443 4.811498 AGCACCCTACTACATACATACCA 58.189 43.478 0.00 0.00 0.00 3.25
3011 3444 5.803237 AAGCACCCTACTACATACATACC 57.197 43.478 0.00 0.00 0.00 2.73
3012 3445 6.482308 CCAAAAGCACCCTACTACATACATAC 59.518 42.308 0.00 0.00 0.00 2.39
3013 3446 6.157297 ACCAAAAGCACCCTACTACATACATA 59.843 38.462 0.00 0.00 0.00 2.29
3014 3447 5.045140 ACCAAAAGCACCCTACTACATACAT 60.045 40.000 0.00 0.00 0.00 2.29
3015 3448 4.287585 ACCAAAAGCACCCTACTACATACA 59.712 41.667 0.00 0.00 0.00 2.29
3016 3449 4.840271 ACCAAAAGCACCCTACTACATAC 58.160 43.478 0.00 0.00 0.00 2.39
3017 3450 5.221966 ACAACCAAAAGCACCCTACTACATA 60.222 40.000 0.00 0.00 0.00 2.29
3018 3451 4.079253 CAACCAAAAGCACCCTACTACAT 58.921 43.478 0.00 0.00 0.00 2.29
3019 3452 3.117813 ACAACCAAAAGCACCCTACTACA 60.118 43.478 0.00 0.00 0.00 2.74
3020 3453 3.483421 ACAACCAAAAGCACCCTACTAC 58.517 45.455 0.00 0.00 0.00 2.73
3021 3454 3.868619 ACAACCAAAAGCACCCTACTA 57.131 42.857 0.00 0.00 0.00 1.82
3022 3455 2.748209 ACAACCAAAAGCACCCTACT 57.252 45.000 0.00 0.00 0.00 2.57
3023 3456 3.483421 AGTACAACCAAAAGCACCCTAC 58.517 45.455 0.00 0.00 0.00 3.18
3024 3457 3.497227 GGAGTACAACCAAAAGCACCCTA 60.497 47.826 0.00 0.00 0.00 3.53
3025 3458 2.583143 GAGTACAACCAAAAGCACCCT 58.417 47.619 0.00 0.00 0.00 4.34
3026 3459 1.611977 GGAGTACAACCAAAAGCACCC 59.388 52.381 0.00 0.00 0.00 4.61
3027 3460 1.611977 GGGAGTACAACCAAAAGCACC 59.388 52.381 10.46 0.00 0.00 5.01
3028 3461 2.552743 GAGGGAGTACAACCAAAAGCAC 59.447 50.000 8.35 0.00 0.00 4.40
3029 3462 2.488347 GGAGGGAGTACAACCAAAAGCA 60.488 50.000 8.35 0.00 0.00 3.91
3030 3463 2.160205 GGAGGGAGTACAACCAAAAGC 58.840 52.381 8.35 0.00 0.00 3.51
3031 3464 2.224450 ACGGAGGGAGTACAACCAAAAG 60.224 50.000 8.35 2.03 0.00 2.27
3032 3465 1.770061 ACGGAGGGAGTACAACCAAAA 59.230 47.619 8.35 0.00 0.00 2.44
3033 3466 1.426751 ACGGAGGGAGTACAACCAAA 58.573 50.000 8.35 0.00 0.00 3.28
3034 3467 1.345415 GAACGGAGGGAGTACAACCAA 59.655 52.381 8.35 0.00 0.00 3.67
3035 3468 0.971386 GAACGGAGGGAGTACAACCA 59.029 55.000 8.35 0.00 0.00 3.67
3036 3469 0.248565 GGAACGGAGGGAGTACAACC 59.751 60.000 0.00 0.00 0.00 3.77
3037 3470 3.828657 GGAACGGAGGGAGTACAAC 57.171 57.895 0.00 0.00 0.00 3.32
3051 3484 2.817844 ACAAAGGCCTACATTTCGGAAC 59.182 45.455 5.16 0.00 0.00 3.62
3052 3485 3.149005 ACAAAGGCCTACATTTCGGAA 57.851 42.857 5.16 0.00 0.00 4.30
3053 3486 2.871096 ACAAAGGCCTACATTTCGGA 57.129 45.000 5.16 0.00 0.00 4.55
3054 3487 3.869065 TCTACAAAGGCCTACATTTCGG 58.131 45.455 5.16 0.00 0.00 4.30
3055 3488 4.755411 TCTCTACAAAGGCCTACATTTCG 58.245 43.478 5.16 0.00 0.00 3.46
3056 3489 6.261158 GGAATCTCTACAAAGGCCTACATTTC 59.739 42.308 5.16 0.24 0.00 2.17
3057 3490 6.122964 GGAATCTCTACAAAGGCCTACATTT 58.877 40.000 5.16 0.00 0.00 2.32
3058 3491 5.191722 TGGAATCTCTACAAAGGCCTACATT 59.808 40.000 5.16 0.00 0.00 2.71
3059 3492 4.721776 TGGAATCTCTACAAAGGCCTACAT 59.278 41.667 5.16 0.00 0.00 2.29
3060 3493 4.081087 GTGGAATCTCTACAAAGGCCTACA 60.081 45.833 5.16 0.00 0.00 2.74
3061 3494 4.162509 AGTGGAATCTCTACAAAGGCCTAC 59.837 45.833 5.16 0.00 29.47 3.18
3062 3495 4.362677 AGTGGAATCTCTACAAAGGCCTA 58.637 43.478 5.16 0.00 29.47 3.93
3063 3496 3.185455 AGTGGAATCTCTACAAAGGCCT 58.815 45.455 0.00 0.00 29.47 5.19
3064 3497 3.636153 AGTGGAATCTCTACAAAGGCC 57.364 47.619 0.00 0.00 29.47 5.19
3065 3498 5.918608 TGATAGTGGAATCTCTACAAAGGC 58.081 41.667 0.00 0.00 29.47 4.35
3066 3499 7.560368 AGTTGATAGTGGAATCTCTACAAAGG 58.440 38.462 0.00 0.00 29.47 3.11
3067 3500 9.522804 GTAGTTGATAGTGGAATCTCTACAAAG 57.477 37.037 0.00 0.00 35.97 2.77
3068 3501 9.031537 TGTAGTTGATAGTGGAATCTCTACAAA 57.968 33.333 13.99 0.00 38.86 2.83
3069 3502 8.589701 TGTAGTTGATAGTGGAATCTCTACAA 57.410 34.615 13.99 0.00 38.86 2.41
3070 3503 8.768501 ATGTAGTTGATAGTGGAATCTCTACA 57.231 34.615 16.41 16.41 41.72 2.74
3073 3506 8.811017 CCATATGTAGTTGATAGTGGAATCTCT 58.189 37.037 1.24 0.00 0.00 3.10
3074 3507 8.807118 TCCATATGTAGTTGATAGTGGAATCTC 58.193 37.037 1.24 0.00 32.02 2.75
3075 3508 8.727100 TCCATATGTAGTTGATAGTGGAATCT 57.273 34.615 1.24 0.00 32.02 2.40
3076 3509 9.376075 CATCCATATGTAGTTGATAGTGGAATC 57.624 37.037 1.24 0.00 37.96 2.52
3077 3510 8.884323 ACATCCATATGTAGTTGATAGTGGAAT 58.116 33.333 1.24 0.00 44.66 3.01
3078 3511 8.262601 ACATCCATATGTAGTTGATAGTGGAA 57.737 34.615 1.24 0.00 44.66 3.53
3079 3512 7.855784 ACATCCATATGTAGTTGATAGTGGA 57.144 36.000 1.24 0.00 44.66 4.02
3107 3540 9.851686 AATGGATCTACACTTAAAATGCATCTA 57.148 29.630 0.00 0.00 29.57 1.98
3108 3541 8.757982 AATGGATCTACACTTAAAATGCATCT 57.242 30.769 0.00 0.00 29.57 2.90
3109 3542 8.623903 TGAATGGATCTACACTTAAAATGCATC 58.376 33.333 0.00 0.00 29.57 3.91
3110 3543 8.523915 TGAATGGATCTACACTTAAAATGCAT 57.476 30.769 0.00 0.00 30.86 3.96
3111 3544 7.936496 TGAATGGATCTACACTTAAAATGCA 57.064 32.000 0.00 0.00 0.00 3.96
3112 3545 9.807649 AAATGAATGGATCTACACTTAAAATGC 57.192 29.630 0.00 0.00 0.00 3.56
3115 3548 9.638239 GCAAAATGAATGGATCTACACTTAAAA 57.362 29.630 0.00 0.00 0.00 1.52
3116 3549 9.023962 AGCAAAATGAATGGATCTACACTTAAA 57.976 29.630 0.00 0.00 0.00 1.52
3117 3550 8.579850 AGCAAAATGAATGGATCTACACTTAA 57.420 30.769 0.00 0.00 0.00 1.85
3118 3551 7.283127 GGAGCAAAATGAATGGATCTACACTTA 59.717 37.037 0.00 0.00 0.00 2.24
3119 3552 6.096001 GGAGCAAAATGAATGGATCTACACTT 59.904 38.462 0.00 0.00 0.00 3.16
3120 3553 5.591877 GGAGCAAAATGAATGGATCTACACT 59.408 40.000 0.00 0.00 0.00 3.55
3121 3554 5.504665 CGGAGCAAAATGAATGGATCTACAC 60.505 44.000 0.00 0.00 0.00 2.90
3122 3555 4.576053 CGGAGCAAAATGAATGGATCTACA 59.424 41.667 0.00 0.00 0.00 2.74
3123 3556 4.576463 ACGGAGCAAAATGAATGGATCTAC 59.424 41.667 0.00 0.00 0.00 2.59
3124 3557 4.780815 ACGGAGCAAAATGAATGGATCTA 58.219 39.130 0.00 0.00 0.00 1.98
3125 3558 3.624777 ACGGAGCAAAATGAATGGATCT 58.375 40.909 0.00 0.00 0.00 2.75
3126 3559 5.009010 ACATACGGAGCAAAATGAATGGATC 59.991 40.000 0.00 0.00 0.00 3.36
3127 3560 4.889409 ACATACGGAGCAAAATGAATGGAT 59.111 37.500 0.00 0.00 0.00 3.41
3128 3561 4.269183 ACATACGGAGCAAAATGAATGGA 58.731 39.130 0.00 0.00 0.00 3.41
3129 3562 4.637483 ACATACGGAGCAAAATGAATGG 57.363 40.909 0.00 0.00 0.00 3.16
3130 3563 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
3131 3564 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
3132 3565 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
3133 3566 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
3134 3567 4.034048 GTGGACTACATACGGAGCAAAATG 59.966 45.833 0.00 0.00 0.00 2.32
3135 3568 4.189231 GTGGACTACATACGGAGCAAAAT 58.811 43.478 0.00 0.00 0.00 1.82
3136 3569 3.592059 GTGGACTACATACGGAGCAAAA 58.408 45.455 0.00 0.00 0.00 2.44
3137 3570 2.093869 GGTGGACTACATACGGAGCAAA 60.094 50.000 0.00 0.00 0.00 3.68
3138 3571 1.479323 GGTGGACTACATACGGAGCAA 59.521 52.381 0.00 0.00 0.00 3.91
3139 3572 1.108776 GGTGGACTACATACGGAGCA 58.891 55.000 0.00 0.00 0.00 4.26
3140 3573 1.108776 TGGTGGACTACATACGGAGC 58.891 55.000 0.00 0.00 0.00 4.70
3141 3574 2.758979 ACTTGGTGGACTACATACGGAG 59.241 50.000 0.00 0.00 0.00 4.63
3142 3575 2.494471 CACTTGGTGGACTACATACGGA 59.506 50.000 0.00 0.00 0.00 4.69
3143 3576 2.494471 TCACTTGGTGGACTACATACGG 59.506 50.000 0.00 0.00 33.87 4.02
3144 3577 3.861276 TCACTTGGTGGACTACATACG 57.139 47.619 0.00 0.00 33.87 3.06
3145 3578 6.407202 AGATTTCACTTGGTGGACTACATAC 58.593 40.000 0.00 0.00 33.87 2.39
3146 3579 6.440647 AGAGATTTCACTTGGTGGACTACATA 59.559 38.462 0.00 0.00 33.87 2.29
3147 3580 5.249393 AGAGATTTCACTTGGTGGACTACAT 59.751 40.000 0.00 0.00 33.87 2.29
3148 3581 4.593206 AGAGATTTCACTTGGTGGACTACA 59.407 41.667 0.00 0.00 33.87 2.74
3149 3582 5.153950 AGAGATTTCACTTGGTGGACTAC 57.846 43.478 0.00 0.00 33.87 2.73
3150 3583 5.778241 TGTAGAGATTTCACTTGGTGGACTA 59.222 40.000 0.00 0.00 33.87 2.59
3151 3584 4.593206 TGTAGAGATTTCACTTGGTGGACT 59.407 41.667 0.00 0.00 33.87 3.85
3152 3585 4.894784 TGTAGAGATTTCACTTGGTGGAC 58.105 43.478 0.00 0.00 33.87 4.02
3153 3586 5.560722 TTGTAGAGATTTCACTTGGTGGA 57.439 39.130 0.00 0.00 33.87 4.02
3154 3587 5.997746 TCTTTGTAGAGATTTCACTTGGTGG 59.002 40.000 0.00 0.00 33.87 4.61
3155 3588 6.708054 AGTCTTTGTAGAGATTTCACTTGGTG 59.292 38.462 0.00 0.00 34.45 4.17
3156 3589 6.831976 AGTCTTTGTAGAGATTTCACTTGGT 58.168 36.000 0.00 0.00 0.00 3.67
3157 3590 7.736447 AAGTCTTTGTAGAGATTTCACTTGG 57.264 36.000 0.00 0.00 0.00 3.61
3172 3605 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
3173 3606 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
3174 3607 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
3175 3608 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
3176 3609 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
3177 3610 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
3178 3611 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3179 3612 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3180 3613 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
3182 3615 8.759782 CATATTACTCCCTCCGTTCCTAAATAT 58.240 37.037 0.00 0.00 0.00 1.28
3183 3616 7.179694 CCATATTACTCCCTCCGTTCCTAAATA 59.820 40.741 0.00 0.00 0.00 1.40
3184 3617 6.013639 CCATATTACTCCCTCCGTTCCTAAAT 60.014 42.308 0.00 0.00 0.00 1.40
3185 3618 5.306160 CCATATTACTCCCTCCGTTCCTAAA 59.694 44.000 0.00 0.00 0.00 1.85
3186 3619 4.836736 CCATATTACTCCCTCCGTTCCTAA 59.163 45.833 0.00 0.00 0.00 2.69
3187 3620 4.140853 ACCATATTACTCCCTCCGTTCCTA 60.141 45.833 0.00 0.00 0.00 2.94
3188 3621 3.240302 CCATATTACTCCCTCCGTTCCT 58.760 50.000 0.00 0.00 0.00 3.36
3189 3622 2.970640 ACCATATTACTCCCTCCGTTCC 59.029 50.000 0.00 0.00 0.00 3.62
3190 3623 5.245526 ACATACCATATTACTCCCTCCGTTC 59.754 44.000 0.00 0.00 0.00 3.95
3191 3624 5.152934 ACATACCATATTACTCCCTCCGTT 58.847 41.667 0.00 0.00 0.00 4.44
3192 3625 4.748701 ACATACCATATTACTCCCTCCGT 58.251 43.478 0.00 0.00 0.00 4.69
3193 3626 6.380274 ACATACATACCATATTACTCCCTCCG 59.620 42.308 0.00 0.00 0.00 4.63
3194 3627 7.180408 ACACATACATACCATATTACTCCCTCC 59.820 40.741 0.00 0.00 0.00 4.30
3195 3628 8.135382 ACACATACATACCATATTACTCCCTC 57.865 38.462 0.00 0.00 0.00 4.30
3196 3629 8.375506 CAACACATACATACCATATTACTCCCT 58.624 37.037 0.00 0.00 0.00 4.20
3197 3630 8.372459 TCAACACATACATACCATATTACTCCC 58.628 37.037 0.00 0.00 0.00 4.30
3198 3631 9.944376 ATCAACACATACATACCATATTACTCC 57.056 33.333 0.00 0.00 0.00 3.85
3200 3633 9.725019 CCATCAACACATACATACCATATTACT 57.275 33.333 0.00 0.00 0.00 2.24
3201 3634 9.502091 ACCATCAACACATACATACCATATTAC 57.498 33.333 0.00 0.00 0.00 1.89
3202 3635 9.500785 CACCATCAACACATACATACCATATTA 57.499 33.333 0.00 0.00 0.00 0.98
3203 3636 7.998383 ACACCATCAACACATACATACCATATT 59.002 33.333 0.00 0.00 0.00 1.28
3204 3637 7.445096 CACACCATCAACACATACATACCATAT 59.555 37.037 0.00 0.00 0.00 1.78
3205 3638 6.765512 CACACCATCAACACATACATACCATA 59.234 38.462 0.00 0.00 0.00 2.74
3206 3639 5.589855 CACACCATCAACACATACATACCAT 59.410 40.000 0.00 0.00 0.00 3.55
3207 3640 4.940654 CACACCATCAACACATACATACCA 59.059 41.667 0.00 0.00 0.00 3.25
3208 3641 5.064707 GTCACACCATCAACACATACATACC 59.935 44.000 0.00 0.00 0.00 2.73
3209 3642 5.874810 AGTCACACCATCAACACATACATAC 59.125 40.000 0.00 0.00 0.00 2.39
3210 3643 5.874261 CAGTCACACCATCAACACATACATA 59.126 40.000 0.00 0.00 0.00 2.29
3211 3644 4.696877 CAGTCACACCATCAACACATACAT 59.303 41.667 0.00 0.00 0.00 2.29
3212 3645 4.064388 CAGTCACACCATCAACACATACA 58.936 43.478 0.00 0.00 0.00 2.29
3213 3646 3.436704 CCAGTCACACCATCAACACATAC 59.563 47.826 0.00 0.00 0.00 2.39
3214 3647 3.326297 TCCAGTCACACCATCAACACATA 59.674 43.478 0.00 0.00 0.00 2.29
3215 3648 2.106338 TCCAGTCACACCATCAACACAT 59.894 45.455 0.00 0.00 0.00 3.21
3216 3649 1.488393 TCCAGTCACACCATCAACACA 59.512 47.619 0.00 0.00 0.00 3.72
3217 3650 2.254546 TCCAGTCACACCATCAACAC 57.745 50.000 0.00 0.00 0.00 3.32
3218 3651 4.632327 TTATCCAGTCACACCATCAACA 57.368 40.909 0.00 0.00 0.00 3.33
3219 3652 4.271049 CGATTATCCAGTCACACCATCAAC 59.729 45.833 0.00 0.00 0.00 3.18
3220 3653 4.161377 TCGATTATCCAGTCACACCATCAA 59.839 41.667 0.00 0.00 0.00 2.57
3221 3654 3.704061 TCGATTATCCAGTCACACCATCA 59.296 43.478 0.00 0.00 0.00 3.07
3222 3655 4.322080 TCGATTATCCAGTCACACCATC 57.678 45.455 0.00 0.00 0.00 3.51
3223 3656 4.101585 ACATCGATTATCCAGTCACACCAT 59.898 41.667 0.00 0.00 0.00 3.55
3224 3657 3.450817 ACATCGATTATCCAGTCACACCA 59.549 43.478 0.00 0.00 0.00 4.17
3225 3658 4.060038 ACATCGATTATCCAGTCACACC 57.940 45.455 0.00 0.00 0.00 4.16
3226 3659 4.271049 CCAACATCGATTATCCAGTCACAC 59.729 45.833 0.00 0.00 0.00 3.82
3227 3660 4.081142 ACCAACATCGATTATCCAGTCACA 60.081 41.667 0.00 0.00 0.00 3.58
3228 3661 4.271049 CACCAACATCGATTATCCAGTCAC 59.729 45.833 0.00 0.00 0.00 3.67
3229 3662 4.441792 CACCAACATCGATTATCCAGTCA 58.558 43.478 0.00 0.00 0.00 3.41
3230 3663 3.809832 CCACCAACATCGATTATCCAGTC 59.190 47.826 0.00 0.00 0.00 3.51
3231 3664 3.199946 ACCACCAACATCGATTATCCAGT 59.800 43.478 0.00 0.00 0.00 4.00
3232 3665 3.561310 CACCACCAACATCGATTATCCAG 59.439 47.826 0.00 0.00 0.00 3.86
3233 3666 3.198853 TCACCACCAACATCGATTATCCA 59.801 43.478 0.00 0.00 0.00 3.41
3234 3667 3.804036 TCACCACCAACATCGATTATCC 58.196 45.455 0.00 0.00 0.00 2.59
3235 3668 4.693283 TCTCACCACCAACATCGATTATC 58.307 43.478 0.00 0.00 0.00 1.75
3236 3669 4.697514 CTCTCACCACCAACATCGATTAT 58.302 43.478 0.00 0.00 0.00 1.28
3237 3670 3.678806 GCTCTCACCACCAACATCGATTA 60.679 47.826 0.00 0.00 0.00 1.75
3238 3671 2.936993 GCTCTCACCACCAACATCGATT 60.937 50.000 0.00 0.00 0.00 3.34
3239 3672 1.406069 GCTCTCACCACCAACATCGAT 60.406 52.381 0.00 0.00 0.00 3.59
3240 3673 0.037326 GCTCTCACCACCAACATCGA 60.037 55.000 0.00 0.00 0.00 3.59
3241 3674 0.320683 TGCTCTCACCACCAACATCG 60.321 55.000 0.00 0.00 0.00 3.84
3242 3675 2.119801 ATGCTCTCACCACCAACATC 57.880 50.000 0.00 0.00 0.00 3.06
3243 3676 3.719268 TTATGCTCTCACCACCAACAT 57.281 42.857 0.00 0.00 0.00 2.71
3244 3677 3.609853 GATTATGCTCTCACCACCAACA 58.390 45.455 0.00 0.00 0.00 3.33
3245 3678 2.609459 CGATTATGCTCTCACCACCAAC 59.391 50.000 0.00 0.00 0.00 3.77
3246 3679 2.499693 TCGATTATGCTCTCACCACCAA 59.500 45.455 0.00 0.00 0.00 3.67
3247 3680 2.107366 TCGATTATGCTCTCACCACCA 58.893 47.619 0.00 0.00 0.00 4.17
3248 3681 2.890808 TCGATTATGCTCTCACCACC 57.109 50.000 0.00 0.00 0.00 4.61
3249 3682 3.722147 ACATCGATTATGCTCTCACCAC 58.278 45.455 0.00 0.00 39.39 4.16
3250 3683 4.406648 AACATCGATTATGCTCTCACCA 57.593 40.909 0.00 0.00 39.39 4.17
3251 3684 5.986135 ACTAAACATCGATTATGCTCTCACC 59.014 40.000 0.00 0.00 39.39 4.02
3252 3685 7.470289 AACTAAACATCGATTATGCTCTCAC 57.530 36.000 0.00 0.00 39.39 3.51
3253 3686 7.981789 AGAAACTAAACATCGATTATGCTCTCA 59.018 33.333 0.00 0.00 39.39 3.27
3254 3687 8.272176 CAGAAACTAAACATCGATTATGCTCTC 58.728 37.037 0.00 0.00 39.39 3.20
3255 3688 7.766278 ACAGAAACTAAACATCGATTATGCTCT 59.234 33.333 0.00 0.00 39.39 4.09
3256 3689 7.848051 CACAGAAACTAAACATCGATTATGCTC 59.152 37.037 0.00 0.00 39.39 4.26
3257 3690 7.677276 GCACAGAAACTAAACATCGATTATGCT 60.677 37.037 0.00 0.00 39.39 3.79
3258 3691 6.412072 GCACAGAAACTAAACATCGATTATGC 59.588 38.462 0.00 0.00 39.39 3.14
3259 3692 7.463544 TGCACAGAAACTAAACATCGATTATG 58.536 34.615 0.00 0.00 41.74 1.90
3260 3693 7.609760 TGCACAGAAACTAAACATCGATTAT 57.390 32.000 0.00 0.00 0.00 1.28
3261 3694 7.428282 TTGCACAGAAACTAAACATCGATTA 57.572 32.000 0.00 0.00 0.00 1.75
3262 3695 5.940192 TGCACAGAAACTAAACATCGATT 57.060 34.783 0.00 0.00 0.00 3.34
3263 3696 5.940192 TTGCACAGAAACTAAACATCGAT 57.060 34.783 0.00 0.00 0.00 3.59
3264 3697 5.940192 ATTGCACAGAAACTAAACATCGA 57.060 34.783 0.00 0.00 0.00 3.59
3265 3698 7.298122 ACTAATTGCACAGAAACTAAACATCG 58.702 34.615 0.00 0.00 0.00 3.84
3268 3701 8.020819 GCATACTAATTGCACAGAAACTAAACA 58.979 33.333 0.00 0.00 39.90 2.83
3269 3702 8.237267 AGCATACTAATTGCACAGAAACTAAAC 58.763 33.333 0.00 0.00 42.62 2.01
3270 3703 8.236586 CAGCATACTAATTGCACAGAAACTAAA 58.763 33.333 0.00 0.00 42.62 1.85
3271 3704 7.606073 TCAGCATACTAATTGCACAGAAACTAA 59.394 33.333 0.00 0.00 42.62 2.24
3272 3705 7.102993 TCAGCATACTAATTGCACAGAAACTA 58.897 34.615 0.00 0.00 42.62 2.24
3273 3706 5.939883 TCAGCATACTAATTGCACAGAAACT 59.060 36.000 0.00 0.00 42.62 2.66
3274 3707 6.182039 TCAGCATACTAATTGCACAGAAAC 57.818 37.500 0.00 0.00 42.62 2.78
3275 3708 7.395190 AATCAGCATACTAATTGCACAGAAA 57.605 32.000 0.00 0.00 42.62 2.52
3276 3709 7.254421 CGTAATCAGCATACTAATTGCACAGAA 60.254 37.037 0.00 0.00 42.62 3.02
3277 3710 6.200854 CGTAATCAGCATACTAATTGCACAGA 59.799 38.462 0.00 0.00 42.62 3.41
3278 3711 6.357980 CGTAATCAGCATACTAATTGCACAG 58.642 40.000 0.00 0.00 42.62 3.66
3279 3712 5.236263 CCGTAATCAGCATACTAATTGCACA 59.764 40.000 0.00 0.00 42.62 4.57
3280 3713 5.679906 CCGTAATCAGCATACTAATTGCAC 58.320 41.667 0.00 0.00 42.62 4.57
3281 3714 4.213270 GCCGTAATCAGCATACTAATTGCA 59.787 41.667 0.00 0.00 42.62 4.08
3282 3715 4.452455 AGCCGTAATCAGCATACTAATTGC 59.548 41.667 0.00 0.00 40.45 3.56
3283 3716 5.928839 AGAGCCGTAATCAGCATACTAATTG 59.071 40.000 0.00 0.00 0.00 2.32
3284 3717 5.928839 CAGAGCCGTAATCAGCATACTAATT 59.071 40.000 0.00 0.00 0.00 1.40
3285 3718 5.011125 ACAGAGCCGTAATCAGCATACTAAT 59.989 40.000 0.00 0.00 0.00 1.73
3286 3719 4.341235 ACAGAGCCGTAATCAGCATACTAA 59.659 41.667 0.00 0.00 0.00 2.24
3287 3720 3.889538 ACAGAGCCGTAATCAGCATACTA 59.110 43.478 0.00 0.00 0.00 1.82
3288 3721 2.695666 ACAGAGCCGTAATCAGCATACT 59.304 45.455 0.00 0.00 0.00 2.12
3289 3722 3.099267 ACAGAGCCGTAATCAGCATAC 57.901 47.619 0.00 0.00 0.00 2.39
3290 3723 3.889538 AGTACAGAGCCGTAATCAGCATA 59.110 43.478 0.00 0.00 0.00 3.14
3291 3724 2.695666 AGTACAGAGCCGTAATCAGCAT 59.304 45.455 0.00 0.00 0.00 3.79
3292 3725 2.100197 AGTACAGAGCCGTAATCAGCA 58.900 47.619 0.00 0.00 0.00 4.41
3293 3726 2.873133 AGTACAGAGCCGTAATCAGC 57.127 50.000 0.00 0.00 0.00 4.26
3294 3727 5.833082 ACATTAGTACAGAGCCGTAATCAG 58.167 41.667 0.00 0.00 0.00 2.90
3295 3728 5.847111 ACATTAGTACAGAGCCGTAATCA 57.153 39.130 0.00 0.00 0.00 2.57
3296 3729 5.690857 GGAACATTAGTACAGAGCCGTAATC 59.309 44.000 0.00 0.00 0.00 1.75
3297 3730 5.363005 AGGAACATTAGTACAGAGCCGTAAT 59.637 40.000 0.00 0.00 0.00 1.89
3298 3731 4.708421 AGGAACATTAGTACAGAGCCGTAA 59.292 41.667 0.00 0.00 0.00 3.18
3299 3732 4.275810 AGGAACATTAGTACAGAGCCGTA 58.724 43.478 0.00 0.00 0.00 4.02
3300 3733 3.097614 AGGAACATTAGTACAGAGCCGT 58.902 45.455 0.00 0.00 0.00 5.68
3301 3734 3.130516 TGAGGAACATTAGTACAGAGCCG 59.869 47.826 0.00 0.00 0.00 5.52
3302 3735 4.737855 TGAGGAACATTAGTACAGAGCC 57.262 45.455 0.00 0.00 0.00 4.70
3303 3736 7.435068 TTTTTGAGGAACATTAGTACAGAGC 57.565 36.000 0.00 0.00 0.00 4.09
3325 3758 7.839680 AGTTCCAAATACCTCACTGATTTTT 57.160 32.000 0.00 0.00 0.00 1.94
3326 3759 8.934023 TTAGTTCCAAATACCTCACTGATTTT 57.066 30.769 0.00 0.00 0.00 1.82
3327 3760 8.960591 CATTAGTTCCAAATACCTCACTGATTT 58.039 33.333 0.00 0.00 0.00 2.17
3328 3761 8.109634 ACATTAGTTCCAAATACCTCACTGATT 58.890 33.333 0.00 0.00 0.00 2.57
3329 3762 7.633789 ACATTAGTTCCAAATACCTCACTGAT 58.366 34.615 0.00 0.00 0.00 2.90
3330 3763 7.016153 ACATTAGTTCCAAATACCTCACTGA 57.984 36.000 0.00 0.00 0.00 3.41
3331 3764 8.786826 TTACATTAGTTCCAAATACCTCACTG 57.213 34.615 0.00 0.00 0.00 3.66
3332 3765 9.802039 TTTTACATTAGTTCCAAATACCTCACT 57.198 29.630 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.