Multiple sequence alignment - TraesCS2A01G104200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G104200 chr2A 100.000 4178 0 0 1 4178 57696428 57700605 0.000000e+00 7716.0
1 TraesCS2A01G104200 chr2B 88.100 1479 113 30 1544 2998 88846090 88847529 0.000000e+00 1698.0
2 TraesCS2A01G104200 chr2B 90.382 811 38 11 3340 4123 88847995 88848792 0.000000e+00 1029.0
3 TraesCS2A01G104200 chr2B 84.836 732 88 16 2194 2914 4567814 4567095 0.000000e+00 715.0
4 TraesCS2A01G104200 chr2B 91.092 348 19 7 2996 3340 88847570 88847908 1.060000e-125 460.0
5 TraesCS2A01G104200 chr2B 80.936 598 45 24 559 1126 88845391 88845949 3.890000e-110 409.0
6 TraesCS2A01G104200 chr2B 92.391 92 7 0 1139 1230 139229973 139230064 9.420000e-27 132.0
7 TraesCS2A01G104200 chr2D 87.145 1408 139 23 1494 2896 56109458 56110828 0.000000e+00 1559.0
8 TraesCS2A01G104200 chr2D 91.214 1161 57 22 2993 4133 56111104 56112239 0.000000e+00 1537.0
9 TraesCS2A01G104200 chr2D 81.944 576 53 26 559 1126 56108892 56109424 1.380000e-119 440.0
10 TraesCS2A01G104200 chr2D 88.835 206 13 4 1223 1419 603473068 603473272 1.160000e-60 244.0
11 TraesCS2A01G104200 chr2D 96.154 78 2 1 2922 2998 56110987 56111064 4.380000e-25 126.0
12 TraesCS2A01G104200 chr2D 100.000 49 0 0 4130 4178 56112221 56112269 1.600000e-14 91.6
13 TraesCS2A01G104200 chr6D 90.511 548 51 1 1 547 94777624 94778171 0.000000e+00 723.0
14 TraesCS2A01G104200 chr6D 88.530 558 60 4 1 555 381976388 381975832 0.000000e+00 673.0
15 TraesCS2A01G104200 chr6D 93.258 89 6 0 1135 1223 95724152 95724064 9.420000e-27 132.0
16 TraesCS2A01G104200 chr6D 92.391 92 7 0 1139 1230 142846397 142846306 9.420000e-27 132.0
17 TraesCS2A01G104200 chr5A 89.655 551 55 2 2 551 700212922 700212373 0.000000e+00 701.0
18 TraesCS2A01G104200 chr5B 89.890 544 54 1 3 545 56579509 56578966 0.000000e+00 699.0
19 TraesCS2A01G104200 chr7A 89.397 547 57 1 1 546 487623719 487624265 0.000000e+00 688.0
20 TraesCS2A01G104200 chr7A 88.293 205 14 7 1223 1418 24381720 24381923 1.940000e-58 237.0
21 TraesCS2A01G104200 chr7A 88.293 205 14 7 1223 1418 24401479 24401682 1.940000e-58 237.0
22 TraesCS2A01G104200 chr7D 82.084 854 104 35 2002 2826 471236820 471237653 0.000000e+00 684.0
23 TraesCS2A01G104200 chr7D 81.562 320 47 10 1585 1898 471236486 471236799 1.930000e-63 254.0
24 TraesCS2A01G104200 chr7D 87.317 205 15 7 1223 1418 538520547 538520749 1.510000e-54 224.0
25 TraesCS2A01G104200 chr7D 92.222 90 7 0 1137 1226 45403841 45403752 1.220000e-25 128.0
26 TraesCS2A01G104200 chr7D 86.486 74 9 1 574 646 602207461 602207534 3.460000e-11 80.5
27 TraesCS2A01G104200 chrUn 88.829 555 61 1 1 554 23542823 23542269 0.000000e+00 680.0
28 TraesCS2A01G104200 chrUn 86.765 204 21 5 1223 1420 108481557 108481760 5.440000e-54 222.0
29 TraesCS2A01G104200 chr7B 89.071 549 57 3 1 547 547275240 547275787 0.000000e+00 678.0
30 TraesCS2A01G104200 chr7B 81.767 713 90 19 2307 2993 495171602 495172300 1.010000e-155 560.0
31 TraesCS2A01G104200 chr7B 93.333 90 6 0 1139 1228 81419606 81419517 2.620000e-27 134.0
32 TraesCS2A01G104200 chr7B 93.258 89 4 2 1139 1227 13869113 13869199 3.390000e-26 130.0
33 TraesCS2A01G104200 chr3B 88.829 555 57 4 1 550 81532541 81531987 0.000000e+00 676.0
34 TraesCS2A01G104200 chr6B 88.788 553 58 4 4 553 72403216 72402665 0.000000e+00 675.0
35 TraesCS2A01G104200 chr6B 87.255 204 18 3 1223 1419 611414960 611415162 4.200000e-55 226.0
36 TraesCS2A01G104200 chr6B 85.965 114 12 4 1130 1240 549717338 549717226 7.340000e-23 119.0
37 TraesCS2A01G104200 chr5D 88.835 206 13 4 1223 1419 421982570 421982366 1.160000e-60 244.0
38 TraesCS2A01G104200 chr4A 87.379 206 16 5 1223 1419 723576619 723576823 1.170000e-55 228.0
39 TraesCS2A01G104200 chr3D 87.129 202 19 7 1223 1419 387883053 387882854 5.440000e-54 222.0
40 TraesCS2A01G104200 chr4D 93.333 90 5 1 1139 1228 492602236 492602148 9.420000e-27 132.0
41 TraesCS2A01G104200 chr1B 91.304 92 8 0 1139 1230 562890134 562890043 4.380000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G104200 chr2A 57696428 57700605 4177 False 7716.00 7716 100.0000 1 4178 1 chr2A.!!$F1 4177
1 TraesCS2A01G104200 chr2B 88845391 88848792 3401 False 899.00 1698 87.6275 559 4123 4 chr2B.!!$F2 3564
2 TraesCS2A01G104200 chr2B 4567095 4567814 719 True 715.00 715 84.8360 2194 2914 1 chr2B.!!$R1 720
3 TraesCS2A01G104200 chr2D 56108892 56112269 3377 False 750.72 1559 91.2914 559 4178 5 chr2D.!!$F2 3619
4 TraesCS2A01G104200 chr6D 94777624 94778171 547 False 723.00 723 90.5110 1 547 1 chr6D.!!$F1 546
5 TraesCS2A01G104200 chr6D 381975832 381976388 556 True 673.00 673 88.5300 1 555 1 chr6D.!!$R3 554
6 TraesCS2A01G104200 chr5A 700212373 700212922 549 True 701.00 701 89.6550 2 551 1 chr5A.!!$R1 549
7 TraesCS2A01G104200 chr5B 56578966 56579509 543 True 699.00 699 89.8900 3 545 1 chr5B.!!$R1 542
8 TraesCS2A01G104200 chr7A 487623719 487624265 546 False 688.00 688 89.3970 1 546 1 chr7A.!!$F3 545
9 TraesCS2A01G104200 chr7D 471236486 471237653 1167 False 469.00 684 81.8230 1585 2826 2 chr7D.!!$F3 1241
10 TraesCS2A01G104200 chrUn 23542269 23542823 554 True 680.00 680 88.8290 1 554 1 chrUn.!!$R1 553
11 TraesCS2A01G104200 chr7B 547275240 547275787 547 False 678.00 678 89.0710 1 547 1 chr7B.!!$F3 546
12 TraesCS2A01G104200 chr7B 495171602 495172300 698 False 560.00 560 81.7670 2307 2993 1 chr7B.!!$F2 686
13 TraesCS2A01G104200 chr3B 81531987 81532541 554 True 676.00 676 88.8290 1 550 1 chr3B.!!$R1 549
14 TraesCS2A01G104200 chr6B 72402665 72403216 551 True 675.00 675 88.7880 4 553 1 chr6B.!!$R1 549

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 292 0.105453 CCCCCTTCCTCTGCTAGCTA 60.105 60.0 17.23 3.1 0.0 3.32 F
1396 1437 0.109458 TAGGTGTACGCGCAGACTTG 60.109 55.0 5.73 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1482 1528 0.034337 TCAAAGCCCCGTACAGACAC 59.966 55.0 0.0 0.0 0.00 3.67 R
3395 3824 0.036952 AGGGACTGCAACATCTGTCG 60.037 55.0 0.0 0.0 37.18 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 2.586258 GTCCACTGCACTGACGATAT 57.414 50.000 0.00 0.00 0.00 1.63
108 109 1.829849 CTGCATTCTCCTCCTCTGTCA 59.170 52.381 0.00 0.00 0.00 3.58
146 147 0.319211 CCGCAACTAGTTCACCGACA 60.319 55.000 16.89 0.00 0.00 4.35
195 196 0.531532 GCTCATCCACGACTCCATGG 60.532 60.000 4.97 4.97 37.32 3.66
290 292 0.105453 CCCCCTTCCTCTGCTAGCTA 60.105 60.000 17.23 3.10 0.00 3.32
295 297 4.534103 CCCCTTCCTCTGCTAGCTATTAAT 59.466 45.833 17.23 0.00 0.00 1.40
297 299 5.483583 CCCTTCCTCTGCTAGCTATTAATCT 59.516 44.000 17.23 0.00 0.00 2.40
339 341 7.512746 AGTGTTAGCTCTTAATCATACCCCATA 59.487 37.037 0.00 0.00 0.00 2.74
341 343 7.291416 TGTTAGCTCTTAATCATACCCCATACA 59.709 37.037 0.00 0.00 0.00 2.29
370 376 1.238439 ACAGTGTGTAGTTGCATGCC 58.762 50.000 16.68 0.00 0.00 4.40
389 396 1.822990 CCTCAAGACAATGCAGGCAAT 59.177 47.619 0.00 0.00 0.00 3.56
455 462 0.738389 CAGGCAACCAAACAACTCGT 59.262 50.000 0.00 0.00 37.17 4.18
493 501 1.003580 CTGTTTTCCAGAGCCAGGCTA 59.996 52.381 16.16 0.00 44.49 3.93
498 506 0.252239 TCCAGAGCCAGGCTAAGTGA 60.252 55.000 16.16 6.12 39.88 3.41
500 508 1.003580 CCAGAGCCAGGCTAAGTGAAA 59.996 52.381 16.16 0.00 39.88 2.69
515 523 3.219281 AGTGAAAAAGGGTATGCAACGT 58.781 40.909 0.00 0.00 0.00 3.99
532 540 2.011947 ACGTAGATACTGTAGCGCACA 58.988 47.619 11.47 11.35 35.30 4.57
533 541 2.421073 ACGTAGATACTGTAGCGCACAA 59.579 45.455 11.47 0.00 36.48 3.33
547 555 0.457681 GCACAACAACCAAACACGCT 60.458 50.000 0.00 0.00 0.00 5.07
554 562 4.223320 ACAACCAAACACGCTCTTAATG 57.777 40.909 0.00 0.00 0.00 1.90
556 564 2.858745 ACCAAACACGCTCTTAATGGT 58.141 42.857 0.00 0.00 34.98 3.55
557 565 2.812011 ACCAAACACGCTCTTAATGGTC 59.188 45.455 0.00 0.00 34.78 4.02
575 583 0.326595 TCAGGCAACGGGAGCAAATA 59.673 50.000 0.00 0.00 46.39 1.40
581 589 4.464597 AGGCAACGGGAGCAAATATTTTTA 59.535 37.500 0.00 0.00 46.39 1.52
583 591 5.393678 GGCAACGGGAGCAAATATTTTTAGA 60.394 40.000 0.00 0.00 0.00 2.10
617 625 3.181511 GCTACAAATATGCTGCGTGTTCA 60.182 43.478 4.25 0.00 0.00 3.18
676 684 2.619013 CCATGAGGCAAACGAAGAAC 57.381 50.000 0.00 0.00 0.00 3.01
704 712 3.834435 ATGAAACGCAAACGAAAAAGC 57.166 38.095 0.00 0.00 43.93 3.51
706 714 2.849473 TGAAACGCAAACGAAAAAGCTC 59.151 40.909 0.00 0.00 43.93 4.09
707 715 1.835121 AACGCAAACGAAAAAGCTCC 58.165 45.000 0.00 0.00 43.93 4.70
708 716 1.021968 ACGCAAACGAAAAAGCTCCT 58.978 45.000 0.00 0.00 43.93 3.69
711 719 2.287009 CGCAAACGAAAAAGCTCCTCTT 60.287 45.455 0.00 0.00 43.93 2.85
712 720 3.706698 GCAAACGAAAAAGCTCCTCTTT 58.293 40.909 0.00 0.00 46.42 2.52
786 810 2.163010 GCGCTACCATATTCCGCTACTA 59.837 50.000 0.00 0.00 41.28 1.82
791 815 2.818432 ACCATATTCCGCTACTACCTCG 59.182 50.000 0.00 0.00 0.00 4.63
801 825 2.349627 GCTACTACCTCGTCAGCGTATG 60.350 54.545 0.00 0.00 39.49 2.39
811 838 2.349155 CGTCAGCGTATGTATAGCGACA 60.349 50.000 0.00 0.00 35.68 4.35
863 900 1.154205 AAGCCGCGAGATCGATTTGG 61.154 55.000 8.23 0.00 43.02 3.28
868 905 1.145759 GCGAGATCGATTTGGCGACA 61.146 55.000 7.16 0.00 43.79 4.35
1025 1066 1.324005 GCCTCCGAGGTGAGCTACTT 61.324 60.000 16.09 0.00 37.80 2.24
1026 1067 2.022754 GCCTCCGAGGTGAGCTACTTA 61.023 57.143 16.09 0.00 37.80 2.24
1027 1068 1.677052 CCTCCGAGGTGAGCTACTTAC 59.323 57.143 6.24 0.00 0.00 2.34
1028 1069 2.645802 CTCCGAGGTGAGCTACTTACT 58.354 52.381 0.00 0.00 0.00 2.24
1029 1070 3.018149 CTCCGAGGTGAGCTACTTACTT 58.982 50.000 0.00 0.00 0.00 2.24
1030 1071 3.428532 TCCGAGGTGAGCTACTTACTTT 58.571 45.455 0.00 0.00 0.00 2.66
1050 1091 2.545731 TGCTTTTTCTTTTTGACGGGC 58.454 42.857 0.00 0.00 0.00 6.13
1066 1107 3.071206 GCCCGAGGTGAGAGAGCA 61.071 66.667 0.00 0.00 0.00 4.26
1067 1108 3.074999 GCCCGAGGTGAGAGAGCAG 62.075 68.421 0.00 0.00 0.00 4.24
1070 1111 1.433064 CGAGGTGAGAGAGCAGAGC 59.567 63.158 0.00 0.00 0.00 4.09
1072 1113 1.185315 GAGGTGAGAGAGCAGAGCTT 58.815 55.000 0.00 0.00 39.88 3.74
1073 1114 0.896923 AGGTGAGAGAGCAGAGCTTG 59.103 55.000 0.00 0.00 39.88 4.01
1106 1147 3.695816 CGTAGCTCGACTTTCATGATCA 58.304 45.455 0.00 0.00 42.86 2.92
1126 1167 0.453390 ATTCGGTTCCGTCGGAGTAC 59.547 55.000 14.79 10.77 31.21 2.73
1127 1168 0.606401 TTCGGTTCCGTCGGAGTACT 60.606 55.000 14.79 0.00 31.21 2.73
1128 1169 1.021390 TCGGTTCCGTCGGAGTACTC 61.021 60.000 14.79 14.87 31.21 2.59
1129 1170 1.805910 GGTTCCGTCGGAGTACTCC 59.194 63.158 29.18 29.18 46.18 3.85
1143 1184 5.702209 CGGAGTACTCCTTCTCTATTACTCC 59.298 48.000 33.70 13.41 46.57 3.85
1144 1185 6.005823 GGAGTACTCCTTCTCTATTACTCCC 58.994 48.000 31.12 2.21 45.29 4.30
1145 1186 6.183361 GGAGTACTCCTTCTCTATTACTCCCT 60.183 46.154 31.12 0.00 45.29 4.20
1146 1187 6.844829 AGTACTCCTTCTCTATTACTCCCTC 58.155 44.000 0.00 0.00 0.00 4.30
1147 1188 5.069518 ACTCCTTCTCTATTACTCCCTCC 57.930 47.826 0.00 0.00 0.00 4.30
1148 1189 4.076394 CTCCTTCTCTATTACTCCCTCCG 58.924 52.174 0.00 0.00 0.00 4.63
1149 1190 3.462579 TCCTTCTCTATTACTCCCTCCGT 59.537 47.826 0.00 0.00 0.00 4.69
1150 1191 3.822167 CCTTCTCTATTACTCCCTCCGTC 59.178 52.174 0.00 0.00 0.00 4.79
1151 1192 3.505480 TCTCTATTACTCCCTCCGTCC 57.495 52.381 0.00 0.00 0.00 4.79
1152 1193 2.107901 TCTCTATTACTCCCTCCGTCCC 59.892 54.545 0.00 0.00 0.00 4.46
1153 1194 1.854939 TCTATTACTCCCTCCGTCCCA 59.145 52.381 0.00 0.00 0.00 4.37
1154 1195 2.449730 TCTATTACTCCCTCCGTCCCAT 59.550 50.000 0.00 0.00 0.00 4.00
1155 1196 3.659195 TCTATTACTCCCTCCGTCCCATA 59.341 47.826 0.00 0.00 0.00 2.74
1156 1197 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
1157 1198 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
1158 1199 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
1159 1200 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
1160 1201 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
1161 1202 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
1162 1203 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
1163 1204 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
1164 1205 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
1165 1206 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
1166 1207 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
1167 1208 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
1168 1209 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
1169 1210 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
1170 1211 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
1171 1212 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
1172 1213 8.066000 CCGTCCCATAATATAAGAACGTTTTTC 58.934 37.037 7.42 0.00 0.00 2.29
1173 1214 8.605746 CGTCCCATAATATAAGAACGTTTTTCA 58.394 33.333 7.42 0.00 0.00 2.69
1217 1258 9.763465 AAACGTTTTTATATTATGTGACGAAGG 57.237 29.630 7.96 0.00 33.86 3.46
1218 1259 7.912383 ACGTTTTTATATTATGTGACGAAGGG 58.088 34.615 0.00 0.00 33.86 3.95
1219 1260 7.765360 ACGTTTTTATATTATGTGACGAAGGGA 59.235 33.333 0.00 0.00 33.86 4.20
1220 1261 8.273557 CGTTTTTATATTATGTGACGAAGGGAG 58.726 37.037 0.00 0.00 0.00 4.30
1221 1262 9.106070 GTTTTTATATTATGTGACGAAGGGAGT 57.894 33.333 0.00 0.00 0.00 3.85
1223 1264 9.976511 TTTTATATTATGTGACGAAGGGAGTAG 57.023 33.333 0.00 0.00 0.00 2.57
1224 1265 8.701908 TTATATTATGTGACGAAGGGAGTAGT 57.298 34.615 0.00 0.00 0.00 2.73
1225 1266 5.934402 ATTATGTGACGAAGGGAGTAGTT 57.066 39.130 0.00 0.00 0.00 2.24
1226 1267 5.733620 TTATGTGACGAAGGGAGTAGTTT 57.266 39.130 0.00 0.00 0.00 2.66
1227 1268 6.839124 TTATGTGACGAAGGGAGTAGTTTA 57.161 37.500 0.00 0.00 0.00 2.01
1228 1269 4.510038 TGTGACGAAGGGAGTAGTTTAC 57.490 45.455 0.00 0.00 0.00 2.01
1229 1270 3.890756 TGTGACGAAGGGAGTAGTTTACA 59.109 43.478 0.00 0.00 0.00 2.41
1230 1271 4.022589 TGTGACGAAGGGAGTAGTTTACAG 60.023 45.833 0.00 0.00 0.00 2.74
1231 1272 4.022503 GTGACGAAGGGAGTAGTTTACAGT 60.023 45.833 0.00 0.00 0.00 3.55
1232 1273 4.022589 TGACGAAGGGAGTAGTTTACAGTG 60.023 45.833 0.00 0.00 0.00 3.66
1233 1274 3.251571 CGAAGGGAGTAGTTTACAGTGC 58.748 50.000 0.00 0.00 0.00 4.40
1234 1275 3.251571 GAAGGGAGTAGTTTACAGTGCG 58.748 50.000 0.00 0.00 0.00 5.34
1235 1276 2.245582 AGGGAGTAGTTTACAGTGCGT 58.754 47.619 0.00 0.00 0.00 5.24
1236 1277 2.029290 AGGGAGTAGTTTACAGTGCGTG 60.029 50.000 0.00 0.00 0.00 5.34
1237 1278 1.725164 GGAGTAGTTTACAGTGCGTGC 59.275 52.381 0.00 0.00 0.00 5.34
1238 1279 2.400399 GAGTAGTTTACAGTGCGTGCA 58.600 47.619 0.00 0.00 0.00 4.57
1239 1280 2.993899 GAGTAGTTTACAGTGCGTGCAT 59.006 45.455 0.00 0.00 0.00 3.96
1240 1281 2.736721 AGTAGTTTACAGTGCGTGCATG 59.263 45.455 0.09 0.09 0.00 4.06
1241 1282 1.593196 AGTTTACAGTGCGTGCATGT 58.407 45.000 7.93 1.04 0.00 3.21
1242 1283 2.761559 AGTTTACAGTGCGTGCATGTA 58.238 42.857 7.93 0.00 0.00 2.29
1243 1284 2.478894 AGTTTACAGTGCGTGCATGTAC 59.521 45.455 18.32 18.32 0.00 2.90
1244 1285 1.434555 TTACAGTGCGTGCATGTACC 58.565 50.000 21.66 6.08 0.00 3.34
1245 1286 0.318762 TACAGTGCGTGCATGTACCA 59.681 50.000 21.66 6.57 0.00 3.25
1246 1287 1.227999 ACAGTGCGTGCATGTACCAC 61.228 55.000 21.66 20.08 0.00 4.16
1247 1288 0.950555 CAGTGCGTGCATGTACCACT 60.951 55.000 21.66 22.77 34.56 4.00
1248 1289 0.606096 AGTGCGTGCATGTACCACTA 59.394 50.000 25.23 3.92 33.39 2.74
1249 1290 0.999406 GTGCGTGCATGTACCACTAG 59.001 55.000 15.53 5.25 0.00 2.57
1250 1291 0.892063 TGCGTGCATGTACCACTAGA 59.108 50.000 8.45 0.00 0.00 2.43
1251 1292 1.480545 TGCGTGCATGTACCACTAGAT 59.519 47.619 8.45 0.00 0.00 1.98
1252 1293 2.128035 GCGTGCATGTACCACTAGATC 58.872 52.381 8.45 0.00 0.00 2.75
1253 1294 2.385315 CGTGCATGTACCACTAGATCG 58.615 52.381 8.45 0.00 0.00 3.69
1254 1295 2.223502 CGTGCATGTACCACTAGATCGT 60.224 50.000 8.45 0.00 0.00 3.73
1255 1296 3.733988 CGTGCATGTACCACTAGATCGTT 60.734 47.826 8.45 0.00 0.00 3.85
1256 1297 3.551890 GTGCATGTACCACTAGATCGTTG 59.448 47.826 1.96 0.00 0.00 4.10
1257 1298 3.445805 TGCATGTACCACTAGATCGTTGA 59.554 43.478 0.00 0.00 0.00 3.18
1258 1299 4.099419 TGCATGTACCACTAGATCGTTGAT 59.901 41.667 0.00 0.00 0.00 2.57
1259 1300 5.050490 GCATGTACCACTAGATCGTTGATT 58.950 41.667 0.00 0.00 0.00 2.57
1260 1301 5.523916 GCATGTACCACTAGATCGTTGATTT 59.476 40.000 0.00 0.00 0.00 2.17
1261 1302 6.510157 GCATGTACCACTAGATCGTTGATTTG 60.510 42.308 0.00 0.00 0.00 2.32
1262 1303 6.275494 TGTACCACTAGATCGTTGATTTGA 57.725 37.500 0.00 0.00 0.00 2.69
1263 1304 6.873997 TGTACCACTAGATCGTTGATTTGAT 58.126 36.000 0.00 0.00 0.00 2.57
1264 1305 6.978659 TGTACCACTAGATCGTTGATTTGATC 59.021 38.462 0.00 0.00 41.02 2.92
1265 1306 5.977635 ACCACTAGATCGTTGATTTGATCA 58.022 37.500 0.00 0.00 42.72 2.92
1266 1307 6.406370 ACCACTAGATCGTTGATTTGATCAA 58.594 36.000 3.38 3.38 46.30 2.57
1280 1321 9.513906 TTGATTTGATCAACCTAATACAAGTCA 57.486 29.630 7.89 0.00 43.84 3.41
1281 1322 9.685276 TGATTTGATCAACCTAATACAAGTCAT 57.315 29.630 7.89 0.00 36.11 3.06
1334 1375 9.956720 AACTTCAGATGTTCTATTTTCAAACAG 57.043 29.630 0.00 0.00 36.44 3.16
1335 1376 9.125026 ACTTCAGATGTTCTATTTTCAAACAGT 57.875 29.630 0.00 0.00 36.44 3.55
1375 1416 8.986477 ACAATTAGAGTGATAAAATTGGCAAC 57.014 30.769 0.00 0.00 41.46 4.17
1376 1417 8.034804 ACAATTAGAGTGATAAAATTGGCAACC 58.965 33.333 0.00 0.00 41.46 3.77
1377 1418 7.961326 ATTAGAGTGATAAAATTGGCAACCT 57.039 32.000 0.00 0.00 0.00 3.50
1378 1419 9.474313 AATTAGAGTGATAAAATTGGCAACCTA 57.526 29.630 0.00 0.00 0.00 3.08
1379 1420 8.506168 TTAGAGTGATAAAATTGGCAACCTAG 57.494 34.615 0.00 0.00 0.00 3.02
1380 1421 5.888161 AGAGTGATAAAATTGGCAACCTAGG 59.112 40.000 7.41 7.41 0.00 3.02
1381 1422 5.580022 AGTGATAAAATTGGCAACCTAGGT 58.420 37.500 9.21 9.21 0.00 3.08
1382 1423 5.418840 AGTGATAAAATTGGCAACCTAGGTG 59.581 40.000 17.14 10.95 0.00 4.00
1383 1424 5.185056 GTGATAAAATTGGCAACCTAGGTGT 59.815 40.000 17.14 2.76 0.00 4.16
1384 1425 6.376018 GTGATAAAATTGGCAACCTAGGTGTA 59.624 38.462 17.14 0.00 0.00 2.90
1385 1426 6.376018 TGATAAAATTGGCAACCTAGGTGTAC 59.624 38.462 17.14 9.08 0.00 2.90
1386 1427 2.396590 ATTGGCAACCTAGGTGTACG 57.603 50.000 17.14 5.86 0.00 3.67
1387 1428 0.320946 TTGGCAACCTAGGTGTACGC 60.321 55.000 17.14 15.46 0.00 4.42
1388 1429 1.808390 GGCAACCTAGGTGTACGCG 60.808 63.158 17.14 3.53 0.00 6.01
1389 1430 2.450345 GCAACCTAGGTGTACGCGC 61.450 63.158 17.14 7.98 0.00 6.86
1390 1431 1.080366 CAACCTAGGTGTACGCGCA 60.080 57.895 17.14 0.00 0.00 6.09
1391 1432 1.076533 CAACCTAGGTGTACGCGCAG 61.077 60.000 17.14 2.42 0.00 5.18
1392 1433 1.246056 AACCTAGGTGTACGCGCAGA 61.246 55.000 17.14 0.00 0.00 4.26
1393 1434 1.226603 CCTAGGTGTACGCGCAGAC 60.227 63.158 5.73 0.52 0.00 3.51
1394 1435 1.654954 CCTAGGTGTACGCGCAGACT 61.655 60.000 5.73 0.42 0.00 3.24
1395 1436 0.170561 CTAGGTGTACGCGCAGACTT 59.829 55.000 5.73 0.00 0.00 3.01
1396 1437 0.109458 TAGGTGTACGCGCAGACTTG 60.109 55.000 5.73 0.00 0.00 3.16
1397 1438 1.663702 GGTGTACGCGCAGACTTGT 60.664 57.895 5.73 0.00 0.00 3.16
1398 1439 0.387622 GGTGTACGCGCAGACTTGTA 60.388 55.000 5.73 0.00 0.00 2.41
1399 1440 1.411394 GTGTACGCGCAGACTTGTAA 58.589 50.000 5.73 0.00 0.00 2.41
1400 1441 1.788308 GTGTACGCGCAGACTTGTAAA 59.212 47.619 5.73 0.00 0.00 2.01
1401 1442 1.788308 TGTACGCGCAGACTTGTAAAC 59.212 47.619 5.73 0.00 0.00 2.01
1402 1443 2.056577 GTACGCGCAGACTTGTAAACT 58.943 47.619 5.73 0.00 0.00 2.66
1403 1444 0.859232 ACGCGCAGACTTGTAAACTG 59.141 50.000 5.73 0.00 35.14 3.16
1404 1445 1.136690 CGCGCAGACTTGTAAACTGA 58.863 50.000 8.75 0.00 34.07 3.41
1405 1446 1.525197 CGCGCAGACTTGTAAACTGAA 59.475 47.619 8.75 0.00 34.07 3.02
1406 1447 2.033236 CGCGCAGACTTGTAAACTGAAA 60.033 45.455 8.75 0.00 34.07 2.69
1407 1448 3.289076 GCGCAGACTTGTAAACTGAAAC 58.711 45.455 0.30 0.00 34.07 2.78
1408 1449 3.531982 CGCAGACTTGTAAACTGAAACG 58.468 45.455 0.00 0.00 34.07 3.60
1409 1450 3.603857 CGCAGACTTGTAAACTGAAACGG 60.604 47.826 0.00 0.00 34.07 4.44
1410 1451 3.558418 GCAGACTTGTAAACTGAAACGGA 59.442 43.478 0.00 0.00 34.07 4.69
1411 1452 4.318831 GCAGACTTGTAAACTGAAACGGAG 60.319 45.833 0.00 0.00 34.07 4.63
1412 1453 4.211374 CAGACTTGTAAACTGAAACGGAGG 59.789 45.833 0.00 0.00 34.07 4.30
1413 1454 3.473625 ACTTGTAAACTGAAACGGAGGG 58.526 45.455 0.00 0.00 0.00 4.30
1414 1455 3.135167 ACTTGTAAACTGAAACGGAGGGA 59.865 43.478 0.00 0.00 0.00 4.20
1415 1456 3.396260 TGTAAACTGAAACGGAGGGAG 57.604 47.619 0.00 0.00 0.00 4.30
1416 1457 2.701951 TGTAAACTGAAACGGAGGGAGT 59.298 45.455 0.00 0.00 0.00 3.85
1417 1458 3.896888 TGTAAACTGAAACGGAGGGAGTA 59.103 43.478 0.00 0.00 0.00 2.59
1418 1459 3.679824 AAACTGAAACGGAGGGAGTAG 57.320 47.619 0.00 0.00 0.00 2.57
1419 1460 0.896226 ACTGAAACGGAGGGAGTAGC 59.104 55.000 0.00 0.00 0.00 3.58
1460 1506 9.485206 AATATAATTGGATTTCTGAAGCATTGC 57.515 29.630 0.00 0.00 0.00 3.56
1461 1507 2.925578 TGGATTTCTGAAGCATTGCG 57.074 45.000 2.38 0.00 0.00 4.85
1462 1508 1.135315 TGGATTTCTGAAGCATTGCGC 60.135 47.619 0.00 0.00 42.91 6.09
1463 1509 1.553308 GATTTCTGAAGCATTGCGCC 58.447 50.000 4.18 0.00 44.04 6.53
1464 1510 0.179156 ATTTCTGAAGCATTGCGCCG 60.179 50.000 4.18 0.00 44.04 6.46
1465 1511 1.233950 TTTCTGAAGCATTGCGCCGA 61.234 50.000 4.18 0.00 44.04 5.54
1466 1512 1.911293 TTCTGAAGCATTGCGCCGAC 61.911 55.000 4.18 0.00 44.04 4.79
1467 1513 3.707156 CTGAAGCATTGCGCCGACG 62.707 63.158 4.18 0.00 44.04 5.12
1468 1514 3.788766 GAAGCATTGCGCCGACGT 61.789 61.111 4.18 0.00 44.04 4.34
1469 1515 2.433491 AAGCATTGCGCCGACGTA 60.433 55.556 4.18 0.00 44.04 3.57
1470 1516 2.612335 GAAGCATTGCGCCGACGTAC 62.612 60.000 4.18 0.00 44.04 3.67
1471 1517 3.186047 GCATTGCGCCGACGTACT 61.186 61.111 4.18 0.00 42.83 2.73
1472 1518 2.995482 CATTGCGCCGACGTACTC 59.005 61.111 4.18 0.00 42.83 2.59
1473 1519 1.803922 CATTGCGCCGACGTACTCA 60.804 57.895 4.18 0.00 42.83 3.41
1474 1520 1.516386 ATTGCGCCGACGTACTCAG 60.516 57.895 4.18 0.00 42.83 3.35
1475 1521 4.771356 TGCGCCGACGTACTCAGC 62.771 66.667 4.18 0.00 42.83 4.26
1477 1523 4.111016 CGCCGACGTACTCAGCCA 62.111 66.667 0.00 0.00 33.53 4.75
1478 1524 2.202623 GCCGACGTACTCAGCCAG 60.203 66.667 0.00 0.00 0.00 4.85
1479 1525 2.202623 CCGACGTACTCAGCCAGC 60.203 66.667 0.00 0.00 0.00 4.85
1480 1526 2.202623 CGACGTACTCAGCCAGCC 60.203 66.667 0.00 0.00 0.00 4.85
1481 1527 2.970639 GACGTACTCAGCCAGCCA 59.029 61.111 0.00 0.00 0.00 4.75
1482 1528 1.153745 GACGTACTCAGCCAGCCAG 60.154 63.158 0.00 0.00 0.00 4.85
1483 1529 1.878656 GACGTACTCAGCCAGCCAGT 61.879 60.000 0.00 0.00 0.00 4.00
1484 1530 1.446792 CGTACTCAGCCAGCCAGTG 60.447 63.158 2.78 0.00 0.00 3.66
1485 1531 1.674057 GTACTCAGCCAGCCAGTGT 59.326 57.895 2.78 0.00 0.00 3.55
1486 1532 0.390472 GTACTCAGCCAGCCAGTGTC 60.390 60.000 2.78 0.00 0.00 3.67
1487 1533 0.542938 TACTCAGCCAGCCAGTGTCT 60.543 55.000 2.78 0.00 0.00 3.41
1488 1534 1.375652 CTCAGCCAGCCAGTGTCTG 60.376 63.158 0.00 0.00 0.00 3.51
1489 1535 2.109517 CTCAGCCAGCCAGTGTCTGT 62.110 60.000 0.00 0.00 0.00 3.41
1490 1536 0.831711 TCAGCCAGCCAGTGTCTGTA 60.832 55.000 0.00 0.00 0.00 2.74
1491 1537 0.671781 CAGCCAGCCAGTGTCTGTAC 60.672 60.000 0.00 0.00 0.00 2.90
1492 1538 1.738099 GCCAGCCAGTGTCTGTACG 60.738 63.158 0.00 0.00 0.00 3.67
1493 1539 1.079819 CCAGCCAGTGTCTGTACGG 60.080 63.158 0.00 0.00 0.00 4.02
1513 1559 2.430694 GGGGCTTTGAACTGTGAACTTT 59.569 45.455 0.00 0.00 0.00 2.66
1521 1567 6.693315 TTGAACTGTGAACTTTTTCTAGGG 57.307 37.500 0.00 0.00 32.36 3.53
1527 1573 5.794894 TGTGAACTTTTTCTAGGGCTCTAG 58.205 41.667 15.01 15.01 43.27 2.43
1530 1576 5.309806 TGAACTTTTTCTAGGGCTCTAGGTT 59.690 40.000 20.66 15.19 42.42 3.50
1532 1578 5.806818 ACTTTTTCTAGGGCTCTAGGTTTC 58.193 41.667 20.66 0.00 42.42 2.78
1533 1579 5.548446 ACTTTTTCTAGGGCTCTAGGTTTCT 59.452 40.000 20.66 0.00 42.42 2.52
1535 1581 6.793505 TTTTCTAGGGCTCTAGGTTTCTAG 57.206 41.667 20.66 0.00 42.42 2.43
1536 1582 3.834938 TCTAGGGCTCTAGGTTTCTAGC 58.165 50.000 20.66 0.00 42.42 3.42
1537 1583 2.552093 AGGGCTCTAGGTTTCTAGCA 57.448 50.000 0.00 0.00 42.01 3.49
1538 1584 3.053359 AGGGCTCTAGGTTTCTAGCAT 57.947 47.619 0.00 0.00 42.01 3.79
1540 1638 2.224402 GGGCTCTAGGTTTCTAGCATGG 60.224 54.545 0.00 0.00 42.01 3.66
1542 1640 2.700897 GCTCTAGGTTTCTAGCATGGGA 59.299 50.000 0.00 0.00 42.01 4.37
1550 1648 5.011023 AGGTTTCTAGCATGGGAACTTTTTG 59.989 40.000 0.00 0.00 0.00 2.44
1556 1654 3.573967 AGCATGGGAACTTTTTGTGTAGG 59.426 43.478 0.00 0.00 0.00 3.18
1561 1659 3.004002 GGGAACTTTTTGTGTAGGGTTCG 59.996 47.826 0.00 0.00 35.38 3.95
1565 1663 5.648178 ACTTTTTGTGTAGGGTTCGTTTT 57.352 34.783 0.00 0.00 0.00 2.43
1566 1664 6.756299 ACTTTTTGTGTAGGGTTCGTTTTA 57.244 33.333 0.00 0.00 0.00 1.52
1576 1676 9.369904 GTGTAGGGTTCGTTTTATAATCAGTTA 57.630 33.333 0.00 0.00 0.00 2.24
1607 1707 5.411977 TCACAAAAGTGTCGTCCAAAAGTTA 59.588 36.000 0.00 0.00 35.07 2.24
1609 1709 6.250527 CACAAAAGTGTCGTCCAAAAGTTAAG 59.749 38.462 0.00 0.00 35.07 1.85
1611 1711 2.876550 AGTGTCGTCCAAAAGTTAAGGC 59.123 45.455 0.00 0.00 0.00 4.35
1618 1718 2.151202 CCAAAAGTTAAGGCGAGCTCA 58.849 47.619 15.40 0.00 0.00 4.26
1623 1723 5.593679 AAAGTTAAGGCGAGCTCAGTATA 57.406 39.130 15.40 0.00 0.00 1.47
1653 1755 4.467735 GGTGAAGAAGAAACAAGCGAATC 58.532 43.478 0.00 0.00 0.00 2.52
1692 1796 3.495453 CCGGAAACTGAACTGAGGGTTTA 60.495 47.826 0.00 0.00 38.41 2.01
1705 1809 3.556775 TGAGGGTTTAACTTTGTTCGTCG 59.443 43.478 0.00 0.00 0.00 5.12
1748 1852 2.287427 GGCACATCTATTGCTGACATGC 60.287 50.000 0.00 0.00 40.07 4.06
1773 1877 2.381911 TGGACGGGACATTCTAGGTAC 58.618 52.381 0.00 0.00 0.00 3.34
1791 1911 8.977412 TCTAGGTACAGTTCATATGAATGTTGA 58.023 33.333 25.15 17.17 36.33 3.18
1792 1912 9.770097 CTAGGTACAGTTCATATGAATGTTGAT 57.230 33.333 25.15 17.72 36.33 2.57
1825 1945 0.603569 ACTCTTCGTGAATCGTGGCT 59.396 50.000 0.00 0.00 40.80 4.75
1868 1988 4.704965 TCCATGCTCTTCAGATCATCAAG 58.295 43.478 0.00 0.00 29.38 3.02
1880 2000 4.583907 CAGATCATCAAGCTGTAGAGGAGA 59.416 45.833 0.00 0.00 36.62 3.71
1946 2066 4.009370 GAGGTGCCTCTGTAGTTTCTTT 57.991 45.455 10.80 0.00 39.80 2.52
1947 2067 4.390264 GAGGTGCCTCTGTAGTTTCTTTT 58.610 43.478 10.80 0.00 39.80 2.27
1948 2068 5.548406 GAGGTGCCTCTGTAGTTTCTTTTA 58.452 41.667 10.80 0.00 39.80 1.52
1949 2069 5.306394 AGGTGCCTCTGTAGTTTCTTTTAC 58.694 41.667 0.00 0.00 0.00 2.01
1950 2070 5.061179 GGTGCCTCTGTAGTTTCTTTTACA 58.939 41.667 0.00 0.00 0.00 2.41
1951 2071 5.529800 GGTGCCTCTGTAGTTTCTTTTACAA 59.470 40.000 0.00 0.00 30.06 2.41
2141 2261 2.182030 GAGGGCACGAGGAAGACG 59.818 66.667 0.00 0.00 0.00 4.18
2213 2337 4.731773 GCCTTTATCTGGAATGCACTTTCG 60.732 45.833 0.00 0.00 0.00 3.46
2333 2469 1.462616 CGGTTCAATTGATGGGCAGA 58.537 50.000 9.40 0.00 0.00 4.26
2479 2616 4.236935 CAAATGGTTTCCTGAATTCGGTG 58.763 43.478 13.23 5.15 0.00 4.94
2498 2635 1.754226 TGGGCTGTTTGTGACCTTTTC 59.246 47.619 0.00 0.00 0.00 2.29
2499 2636 2.031870 GGGCTGTTTGTGACCTTTTCT 58.968 47.619 0.00 0.00 0.00 2.52
2503 2640 5.475564 GGGCTGTTTGTGACCTTTTCTATTA 59.524 40.000 0.00 0.00 0.00 0.98
2506 2643 7.094377 GGCTGTTTGTGACCTTTTCTATTATGA 60.094 37.037 0.00 0.00 0.00 2.15
2597 2742 1.068194 CGTCTCTTCTTCCTTCGCTGT 60.068 52.381 0.00 0.00 0.00 4.40
2627 2772 5.643777 GGTAAAATGTCATATCTAGGCGCAT 59.356 40.000 10.83 3.98 0.00 4.73
2645 2797 6.940298 AGGCGCATATAAGTATTTGGTTACAT 59.060 34.615 10.83 0.00 0.00 2.29
2695 2851 5.999205 TCCCATGTTGAACATTTTGCTAT 57.001 34.783 8.30 0.00 36.53 2.97
2710 2866 9.970395 ACATTTTGCTATTTATCACCACATATG 57.030 29.630 0.00 0.00 0.00 1.78
2721 2877 9.725019 TTTATCACCACATATGATTCCTCATAC 57.275 33.333 10.38 0.00 44.94 2.39
2722 2878 6.745794 TCACCACATATGATTCCTCATACA 57.254 37.500 10.38 0.00 44.94 2.29
2723 2879 6.762333 TCACCACATATGATTCCTCATACAG 58.238 40.000 10.38 0.00 44.94 2.74
2724 2880 6.327365 TCACCACATATGATTCCTCATACAGT 59.673 38.462 10.38 0.00 44.94 3.55
2725 2881 7.508977 TCACCACATATGATTCCTCATACAGTA 59.491 37.037 10.38 0.00 44.94 2.74
2765 2923 2.388310 TGCAAATTCACCATGCCATG 57.612 45.000 0.00 0.00 39.31 3.66
2776 2934 1.546323 CCATGCCATGACCCACCTATC 60.546 57.143 6.18 0.00 0.00 2.08
2777 2935 1.143481 CATGCCATGACCCACCTATCA 59.857 52.381 0.00 0.00 0.00 2.15
2784 2942 4.141413 CCATGACCCACCTATCATTTCTGA 60.141 45.833 0.00 0.00 33.18 3.27
2826 2987 5.771469 TCATTGCCTACATTGTTTGACAAG 58.229 37.500 0.00 0.00 41.94 3.16
2835 2996 8.504005 CCTACATTGTTTGACAAGTACTTTAGG 58.496 37.037 5.07 6.32 41.94 2.69
2837 2998 7.703328 ACATTGTTTGACAAGTACTTTAGGTG 58.297 34.615 5.07 0.00 41.94 4.00
2855 3016 9.868277 CTTTAGGTGGTGAATAAAATTGCAATA 57.132 29.630 13.39 0.00 0.00 1.90
2859 3020 6.876257 GGTGGTGAATAAAATTGCAATAACCA 59.124 34.615 13.39 13.91 0.00 3.67
2864 3025 7.118971 GTGAATAAAATTGCAATAACCAAGGCA 59.881 33.333 13.39 2.36 0.00 4.75
2868 3029 7.614124 AAAATTGCAATAACCAAGGCATAAG 57.386 32.000 13.39 0.00 35.98 1.73
2998 3294 4.202151 GCTTGTGGAAATCTGGTTTCTTGT 60.202 41.667 12.73 0.00 44.54 3.16
2999 3295 4.916983 TGTGGAAATCTGGTTTCTTGTG 57.083 40.909 12.73 0.00 44.54 3.33
3075 3415 5.343307 ACTTTTGGTTGCAACTCTGAATT 57.657 34.783 27.64 10.11 0.00 2.17
3085 3425 0.613012 ACTCTGAATTTGCCCTGCCC 60.613 55.000 0.00 0.00 0.00 5.36
3090 3430 1.773653 TGAATTTGCCCTGCCCTTTTT 59.226 42.857 0.00 0.00 0.00 1.94
3171 3511 0.384230 CACATGTTGGTCGTCGCAAC 60.384 55.000 0.00 8.31 0.00 4.17
3205 3545 6.438259 TGGTCAAAACTCTAGATCGTCTAG 57.562 41.667 12.93 12.93 45.99 2.43
3213 3553 3.577667 TCTAGATCGTCTAGCTCGCTAC 58.422 50.000 13.84 0.00 44.65 3.58
3280 3621 6.294731 GCAAATGAGTTTCAGATTAACAGGGT 60.295 38.462 0.00 0.00 0.00 4.34
3292 3633 4.988598 CAGGGTTGTGACGCGGCT 62.989 66.667 15.80 0.00 43.00 5.52
3298 3639 0.094730 GTTGTGACGCGGCTCATAAC 59.905 55.000 18.60 18.59 35.80 1.89
3300 3641 1.515519 GTGACGCGGCTCATAACGA 60.516 57.895 15.80 0.00 0.00 3.85
3309 3650 2.794910 CGGCTCATAACGAAATCACGAT 59.205 45.455 0.00 0.00 37.03 3.73
3362 3791 0.986527 TGAGGTGAGCATGTCATGGT 59.013 50.000 17.22 17.22 44.87 3.55
3364 3793 0.694771 AGGTGAGCATGTCATGGTGT 59.305 50.000 21.77 1.60 41.77 4.16
3431 3860 6.420903 GCAGTCCCTTTTATGTTTCAAACTTC 59.579 38.462 1.10 0.00 0.00 3.01
3440 3869 7.841282 TTATGTTTCAAACTTCCCATTACCA 57.159 32.000 1.10 0.00 0.00 3.25
3443 3872 5.835819 TGTTTCAAACTTCCCATTACCATGA 59.164 36.000 1.10 0.00 31.07 3.07
3444 3873 6.496565 TGTTTCAAACTTCCCATTACCATGAT 59.503 34.615 1.10 0.00 31.07 2.45
3492 3931 2.220133 GTGTAATATTACAGGCCGTGCG 59.780 50.000 25.18 0.00 43.67 5.34
3553 3992 0.307760 GTTTCGGGTGCACTGAACTG 59.692 55.000 17.98 5.00 43.96 3.16
3625 4068 2.186903 CGCGGGCTTGATGTAGGT 59.813 61.111 0.00 0.00 0.00 3.08
3719 4166 2.676076 GTCAAAATTGGCGATGCAACT 58.324 42.857 0.00 0.00 0.00 3.16
3720 4167 3.832276 GTCAAAATTGGCGATGCAACTA 58.168 40.909 0.00 0.00 0.00 2.24
3721 4168 4.423732 GTCAAAATTGGCGATGCAACTAT 58.576 39.130 0.00 0.00 0.00 2.12
3722 4169 4.266029 GTCAAAATTGGCGATGCAACTATG 59.734 41.667 0.00 0.00 0.00 2.23
3737 4184 0.811616 CTATGCAAGTCAGGCCGGAC 60.812 60.000 26.55 26.55 38.08 4.79
3796 4254 6.272318 CACAAAGAAACATGCCAACTTCTTA 58.728 36.000 0.00 0.00 37.18 2.10
3797 4255 6.925165 CACAAAGAAACATGCCAACTTCTTAT 59.075 34.615 0.00 0.00 37.18 1.73
3798 4256 7.439056 CACAAAGAAACATGCCAACTTCTTATT 59.561 33.333 0.00 0.00 37.18 1.40
3799 4257 7.986889 ACAAAGAAACATGCCAACTTCTTATTT 59.013 29.630 0.00 0.00 37.18 1.40
3800 4258 8.829612 CAAAGAAACATGCCAACTTCTTATTTT 58.170 29.630 0.00 0.00 37.18 1.82
3804 4262 5.550290 ACATGCCAACTTCTTATTTTTGGG 58.450 37.500 0.00 0.00 39.20 4.12
3874 4332 1.347062 GGGCAATTTTGTTCCCCTGA 58.653 50.000 0.00 0.00 32.60 3.86
4078 4540 1.075542 TCGACGCGCATGAAAAGATT 58.924 45.000 5.73 0.00 0.00 2.40
4082 4544 3.483574 CGACGCGCATGAAAAGATTAGTT 60.484 43.478 5.73 0.00 0.00 2.24
4096 4558 5.234466 AGATTAGTTGGCTGACTTCAAGT 57.766 39.130 0.00 0.00 0.00 3.16
4117 4579 6.173427 AGTGTTTGCCAAGAAATTAACCAT 57.827 33.333 0.00 0.00 0.00 3.55
4123 4585 3.118775 GCCAAGAAATTAACCATCCCACC 60.119 47.826 0.00 0.00 0.00 4.61
4124 4586 3.450817 CCAAGAAATTAACCATCCCACCC 59.549 47.826 0.00 0.00 0.00 4.61
4125 4587 3.398318 AGAAATTAACCATCCCACCCC 57.602 47.619 0.00 0.00 0.00 4.95
4126 4588 2.657459 AGAAATTAACCATCCCACCCCA 59.343 45.455 0.00 0.00 0.00 4.96
4127 4589 3.274690 AGAAATTAACCATCCCACCCCAT 59.725 43.478 0.00 0.00 0.00 4.00
4128 4590 3.328535 AATTAACCATCCCACCCCATC 57.671 47.619 0.00 0.00 0.00 3.51
4129 4591 0.930726 TTAACCATCCCACCCCATCC 59.069 55.000 0.00 0.00 0.00 3.51
4130 4592 0.996762 TAACCATCCCACCCCATCCC 60.997 60.000 0.00 0.00 0.00 3.85
4131 4593 2.699554 CCATCCCACCCCATCCCA 60.700 66.667 0.00 0.00 0.00 4.37
4132 4594 2.603008 CATCCCACCCCATCCCAC 59.397 66.667 0.00 0.00 0.00 4.61
4133 4595 2.699938 ATCCCACCCCATCCCACC 60.700 66.667 0.00 0.00 0.00 4.61
4137 4599 4.060667 CACCCCATCCCACCCCAC 62.061 72.222 0.00 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 109 1.948508 TGCTCGCGCAAAGACAATT 59.051 47.368 8.75 0.00 44.62 2.32
146 147 2.661866 GGCACGACAAGCGACACT 60.662 61.111 0.00 0.00 44.57 3.55
169 170 3.770040 CGTGGATGAGCGACCCCA 61.770 66.667 0.00 0.00 0.00 4.96
195 196 1.522676 CGCCGTGTATGACATGATGAC 59.477 52.381 0.00 0.00 37.29 3.06
207 208 3.696676 TGGTCATGGCGCCGTGTA 61.697 61.111 39.93 26.94 34.75 2.90
317 319 7.038302 CCTGTATGGGGTATGATTAAGAGCTAA 60.038 40.741 0.00 0.00 0.00 3.09
339 341 5.437060 ACTACACACTGTTTGATTTCCTGT 58.563 37.500 0.20 0.00 0.00 4.00
341 343 5.221048 GCAACTACACACTGTTTGATTTCCT 60.221 40.000 0.20 0.00 0.00 3.36
370 376 2.490509 TGATTGCCTGCATTGTCTTGAG 59.509 45.455 0.00 0.00 0.00 3.02
389 396 2.229062 TCAACTTTGGCACGTTGTTTGA 59.771 40.909 21.28 8.28 40.88 2.69
455 462 7.201609 GGAAAACAGTCTCATATGCGACATTTA 60.202 37.037 23.90 0.00 32.55 1.40
493 501 3.634910 ACGTTGCATACCCTTTTTCACTT 59.365 39.130 0.00 0.00 0.00 3.16
498 506 6.315393 CAGTATCTACGTTGCATACCCTTTTT 59.685 38.462 0.00 0.00 0.00 1.94
500 508 5.105064 ACAGTATCTACGTTGCATACCCTTT 60.105 40.000 0.00 0.00 0.00 3.11
515 523 4.171005 GTTGTTGTGCGCTACAGTATCTA 58.829 43.478 13.94 0.00 41.10 1.98
532 540 4.499019 CCATTAAGAGCGTGTTTGGTTGTT 60.499 41.667 0.00 0.00 0.00 2.83
533 541 3.004315 CCATTAAGAGCGTGTTTGGTTGT 59.996 43.478 0.00 0.00 0.00 3.32
547 555 1.339631 CCCGTTGCCTGACCATTAAGA 60.340 52.381 0.00 0.00 0.00 2.10
554 562 3.842925 TTGCTCCCGTTGCCTGACC 62.843 63.158 0.00 0.00 0.00 4.02
556 564 0.326595 TATTTGCTCCCGTTGCCTGA 59.673 50.000 0.00 0.00 0.00 3.86
557 565 1.392589 ATATTTGCTCCCGTTGCCTG 58.607 50.000 0.00 0.00 0.00 4.85
575 583 4.866921 AGCGCGAAAAACCTTCTAAAAAT 58.133 34.783 12.10 0.00 0.00 1.82
581 589 1.873698 TGTAGCGCGAAAAACCTTCT 58.126 45.000 12.10 0.00 0.00 2.85
583 591 3.636282 ATTTGTAGCGCGAAAAACCTT 57.364 38.095 12.10 0.00 0.00 3.50
659 667 2.163818 TCGTTCTTCGTTTGCCTCAT 57.836 45.000 0.00 0.00 40.80 2.90
685 693 2.849473 GAGCTTTTTCGTTTGCGTTTCA 59.151 40.909 0.00 0.00 39.49 2.69
687 695 2.159296 AGGAGCTTTTTCGTTTGCGTTT 60.159 40.909 0.00 0.00 39.49 3.60
688 696 1.404035 AGGAGCTTTTTCGTTTGCGTT 59.596 42.857 0.00 0.00 39.49 4.84
689 697 1.002792 GAGGAGCTTTTTCGTTTGCGT 60.003 47.619 0.00 0.00 39.49 5.24
714 722 6.552445 TTCCTTTTTGATTGGTGGAGAAAA 57.448 33.333 0.00 0.00 0.00 2.29
715 723 6.552445 TTTCCTTTTTGATTGGTGGAGAAA 57.448 33.333 0.00 0.00 0.00 2.52
718 726 5.759763 CCTTTTTCCTTTTTGATTGGTGGAG 59.240 40.000 0.00 0.00 0.00 3.86
719 727 5.190726 ACCTTTTTCCTTTTTGATTGGTGGA 59.809 36.000 0.00 0.00 0.00 4.02
721 729 6.597280 TGAACCTTTTTCCTTTTTGATTGGTG 59.403 34.615 0.00 0.00 0.00 4.17
723 731 6.260714 CCTGAACCTTTTTCCTTTTTGATTGG 59.739 38.462 0.00 0.00 0.00 3.16
786 810 2.225963 GCTATACATACGCTGACGAGGT 59.774 50.000 0.00 0.00 43.93 3.85
791 815 3.263602 TGTCGCTATACATACGCTGAC 57.736 47.619 0.00 0.00 0.00 3.51
811 838 3.941188 CCGGCCTCCATGCGGTAT 61.941 66.667 0.00 0.00 0.00 2.73
819 846 0.035439 GATTGTTTCTCCGGCCTCCA 60.035 55.000 0.00 0.00 0.00 3.86
863 900 1.228657 GGGTGTGGTTTCTCTGTCGC 61.229 60.000 0.00 0.00 0.00 5.19
868 905 0.818040 GCGTTGGGTGTGGTTTCTCT 60.818 55.000 0.00 0.00 0.00 3.10
942 979 2.507769 GGCACGGCTGGTACGTAC 60.508 66.667 17.56 17.56 43.58 3.67
1025 1066 5.808030 CCCGTCAAAAAGAAAAAGCAAAGTA 59.192 36.000 0.00 0.00 0.00 2.24
1026 1067 4.629634 CCCGTCAAAAAGAAAAAGCAAAGT 59.370 37.500 0.00 0.00 0.00 2.66
1027 1068 4.494035 GCCCGTCAAAAAGAAAAAGCAAAG 60.494 41.667 0.00 0.00 0.00 2.77
1028 1069 3.372514 GCCCGTCAAAAAGAAAAAGCAAA 59.627 39.130 0.00 0.00 0.00 3.68
1029 1070 2.933260 GCCCGTCAAAAAGAAAAAGCAA 59.067 40.909 0.00 0.00 0.00 3.91
1030 1071 2.545731 GCCCGTCAAAAAGAAAAAGCA 58.454 42.857 0.00 0.00 0.00 3.91
1050 1091 1.379176 TCTGCTCTCTCACCTCGGG 60.379 63.158 0.00 0.00 0.00 5.14
1084 1125 1.909376 TCATGAAAGTCGAGCTACGC 58.091 50.000 0.00 0.00 42.26 4.42
1085 1126 3.695816 TGATCATGAAAGTCGAGCTACG 58.304 45.455 0.00 0.00 44.09 3.51
1093 1134 5.573146 GGAACCGAATTGATCATGAAAGTC 58.427 41.667 0.00 0.00 0.00 3.01
1103 1144 0.533491 TCCGACGGAACCGAATTGAT 59.467 50.000 15.79 0.00 42.83 2.57
1104 1145 0.108992 CTCCGACGGAACCGAATTGA 60.109 55.000 18.93 9.18 42.83 2.57
1105 1146 0.389426 ACTCCGACGGAACCGAATTG 60.389 55.000 18.93 6.00 42.83 2.32
1106 1147 1.135286 GTACTCCGACGGAACCGAATT 60.135 52.381 18.93 0.00 42.83 2.17
1126 1167 4.076394 CGGAGGGAGTAATAGAGAAGGAG 58.924 52.174 0.00 0.00 0.00 3.69
1127 1168 3.462579 ACGGAGGGAGTAATAGAGAAGGA 59.537 47.826 0.00 0.00 0.00 3.36
1128 1169 3.822167 GACGGAGGGAGTAATAGAGAAGG 59.178 52.174 0.00 0.00 0.00 3.46
1129 1170 3.822167 GGACGGAGGGAGTAATAGAGAAG 59.178 52.174 0.00 0.00 0.00 2.85
1130 1171 3.436180 GGGACGGAGGGAGTAATAGAGAA 60.436 52.174 0.00 0.00 0.00 2.87
1131 1172 2.107901 GGGACGGAGGGAGTAATAGAGA 59.892 54.545 0.00 0.00 0.00 3.10
1132 1173 2.158505 TGGGACGGAGGGAGTAATAGAG 60.159 54.545 0.00 0.00 0.00 2.43
1133 1174 1.854939 TGGGACGGAGGGAGTAATAGA 59.145 52.381 0.00 0.00 0.00 1.98
1134 1175 2.376695 TGGGACGGAGGGAGTAATAG 57.623 55.000 0.00 0.00 0.00 1.73
1135 1176 4.474303 TTATGGGACGGAGGGAGTAATA 57.526 45.455 0.00 0.00 0.00 0.98
1136 1177 3.339713 TTATGGGACGGAGGGAGTAAT 57.660 47.619 0.00 0.00 0.00 1.89
1137 1178 2.852714 TTATGGGACGGAGGGAGTAA 57.147 50.000 0.00 0.00 0.00 2.24
1138 1179 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
1139 1180 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
1140 1181 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
1141 1182 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
1142 1183 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
1143 1184 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
1144 1185 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
1145 1186 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
1146 1187 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
1147 1188 8.605746 TGAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
1191 1232 9.763465 CCTTCGTCACATAATATAAAAACGTTT 57.237 29.630 7.96 7.96 0.00 3.60
1192 1233 8.392612 CCCTTCGTCACATAATATAAAAACGTT 58.607 33.333 0.00 0.00 0.00 3.99
1193 1234 7.765360 TCCCTTCGTCACATAATATAAAAACGT 59.235 33.333 0.00 0.00 0.00 3.99
1194 1235 8.133754 TCCCTTCGTCACATAATATAAAAACG 57.866 34.615 0.00 0.00 0.00 3.60
1195 1236 9.106070 ACTCCCTTCGTCACATAATATAAAAAC 57.894 33.333 0.00 0.00 0.00 2.43
1197 1238 9.976511 CTACTCCCTTCGTCACATAATATAAAA 57.023 33.333 0.00 0.00 0.00 1.52
1198 1239 9.139734 ACTACTCCCTTCGTCACATAATATAAA 57.860 33.333 0.00 0.00 0.00 1.40
1199 1240 8.701908 ACTACTCCCTTCGTCACATAATATAA 57.298 34.615 0.00 0.00 0.00 0.98
1200 1241 8.701908 AACTACTCCCTTCGTCACATAATATA 57.298 34.615 0.00 0.00 0.00 0.86
1201 1242 7.598759 AACTACTCCCTTCGTCACATAATAT 57.401 36.000 0.00 0.00 0.00 1.28
1202 1243 7.414222 AAACTACTCCCTTCGTCACATAATA 57.586 36.000 0.00 0.00 0.00 0.98
1203 1244 5.934402 AACTACTCCCTTCGTCACATAAT 57.066 39.130 0.00 0.00 0.00 1.28
1204 1245 5.733620 AAACTACTCCCTTCGTCACATAA 57.266 39.130 0.00 0.00 0.00 1.90
1205 1246 5.711506 TGTAAACTACTCCCTTCGTCACATA 59.288 40.000 0.00 0.00 0.00 2.29
1206 1247 4.525487 TGTAAACTACTCCCTTCGTCACAT 59.475 41.667 0.00 0.00 0.00 3.21
1207 1248 3.890756 TGTAAACTACTCCCTTCGTCACA 59.109 43.478 0.00 0.00 0.00 3.58
1208 1249 4.022503 ACTGTAAACTACTCCCTTCGTCAC 60.023 45.833 0.00 0.00 0.00 3.67
1209 1250 4.022589 CACTGTAAACTACTCCCTTCGTCA 60.023 45.833 0.00 0.00 0.00 4.35
1210 1251 4.483311 CACTGTAAACTACTCCCTTCGTC 58.517 47.826 0.00 0.00 0.00 4.20
1211 1252 3.305881 GCACTGTAAACTACTCCCTTCGT 60.306 47.826 0.00 0.00 0.00 3.85
1212 1253 3.251571 GCACTGTAAACTACTCCCTTCG 58.748 50.000 0.00 0.00 0.00 3.79
1213 1254 3.251571 CGCACTGTAAACTACTCCCTTC 58.748 50.000 0.00 0.00 0.00 3.46
1214 1255 2.631545 ACGCACTGTAAACTACTCCCTT 59.368 45.455 0.00 0.00 0.00 3.95
1215 1256 2.029290 CACGCACTGTAAACTACTCCCT 60.029 50.000 0.00 0.00 0.00 4.20
1216 1257 2.334838 CACGCACTGTAAACTACTCCC 58.665 52.381 0.00 0.00 0.00 4.30
1217 1258 1.725164 GCACGCACTGTAAACTACTCC 59.275 52.381 0.00 0.00 0.00 3.85
1218 1259 2.400399 TGCACGCACTGTAAACTACTC 58.600 47.619 0.00 0.00 0.00 2.59
1219 1260 2.519377 TGCACGCACTGTAAACTACT 57.481 45.000 0.00 0.00 0.00 2.57
1220 1261 2.478894 ACATGCACGCACTGTAAACTAC 59.521 45.455 0.00 0.00 0.00 2.73
1221 1262 2.761559 ACATGCACGCACTGTAAACTA 58.238 42.857 0.00 0.00 0.00 2.24
1222 1263 1.593196 ACATGCACGCACTGTAAACT 58.407 45.000 0.00 0.00 0.00 2.66
1223 1264 2.412325 GGTACATGCACGCACTGTAAAC 60.412 50.000 12.65 7.12 0.00 2.01
1224 1265 1.801771 GGTACATGCACGCACTGTAAA 59.198 47.619 12.65 0.00 0.00 2.01
1225 1266 1.270358 TGGTACATGCACGCACTGTAA 60.270 47.619 12.65 1.47 0.00 2.41
1226 1267 0.318762 TGGTACATGCACGCACTGTA 59.681 50.000 0.00 2.38 0.00 2.74
1227 1268 1.070615 TGGTACATGCACGCACTGT 59.929 52.632 0.00 3.34 0.00 3.55
1228 1269 0.950555 AGTGGTACATGCACGCACTG 60.951 55.000 15.36 0.00 44.52 3.66
1229 1270 0.606096 TAGTGGTACATGCACGCACT 59.394 50.000 18.36 18.36 44.52 4.40
1230 1271 0.999406 CTAGTGGTACATGCACGCAC 59.001 55.000 8.74 8.74 44.52 5.34
1231 1272 0.892063 TCTAGTGGTACATGCACGCA 59.108 50.000 0.00 0.00 44.52 5.24
1232 1273 2.128035 GATCTAGTGGTACATGCACGC 58.872 52.381 0.00 0.00 44.52 5.34
1233 1274 2.223502 ACGATCTAGTGGTACATGCACG 60.224 50.000 0.00 0.00 44.52 5.34
1234 1275 3.438297 ACGATCTAGTGGTACATGCAC 57.562 47.619 0.00 0.00 44.52 4.57
1235 1276 3.445805 TCAACGATCTAGTGGTACATGCA 59.554 43.478 0.00 0.00 44.52 3.96
1236 1277 4.041740 TCAACGATCTAGTGGTACATGC 57.958 45.455 0.00 0.00 44.52 4.06
1237 1278 6.756542 TCAAATCAACGATCTAGTGGTACATG 59.243 38.462 0.00 0.00 44.52 3.21
1238 1279 6.873997 TCAAATCAACGATCTAGTGGTACAT 58.126 36.000 0.00 0.00 44.52 2.29
1239 1280 6.275494 TCAAATCAACGATCTAGTGGTACA 57.725 37.500 0.00 0.00 0.00 2.90
1240 1281 6.978659 TGATCAAATCAACGATCTAGTGGTAC 59.021 38.462 0.00 0.00 39.06 3.34
1241 1282 7.107639 TGATCAAATCAACGATCTAGTGGTA 57.892 36.000 0.00 0.00 39.06 3.25
1242 1283 5.977635 TGATCAAATCAACGATCTAGTGGT 58.022 37.500 0.00 0.00 39.06 4.16
1243 1284 6.908870 TTGATCAAATCAACGATCTAGTGG 57.091 37.500 5.45 0.00 43.84 4.00
1254 1295 9.513906 TGACTTGTATTAGGTTGATCAAATCAA 57.486 29.630 10.35 4.61 46.30 2.57
1255 1296 9.685276 ATGACTTGTATTAGGTTGATCAAATCA 57.315 29.630 10.35 0.00 37.55 2.57
1308 1349 9.956720 CTGTTTGAAAATAGAACATCTGAAGTT 57.043 29.630 0.00 0.00 33.31 2.66
1309 1350 9.125026 ACTGTTTGAAAATAGAACATCTGAAGT 57.875 29.630 6.55 0.00 33.31 3.01
1350 1391 8.034804 GGTTGCCAATTTTATCACTCTAATTGT 58.965 33.333 0.00 0.00 36.65 2.71
1351 1392 8.253113 AGGTTGCCAATTTTATCACTCTAATTG 58.747 33.333 0.00 0.00 37.59 2.32
1352 1393 8.366359 AGGTTGCCAATTTTATCACTCTAATT 57.634 30.769 0.00 0.00 0.00 1.40
1353 1394 7.961326 AGGTTGCCAATTTTATCACTCTAAT 57.039 32.000 0.00 0.00 0.00 1.73
1354 1395 7.556275 CCTAGGTTGCCAATTTTATCACTCTAA 59.444 37.037 0.00 0.00 0.00 2.10
1355 1396 7.054124 CCTAGGTTGCCAATTTTATCACTCTA 58.946 38.462 0.00 0.00 0.00 2.43
1356 1397 5.888161 CCTAGGTTGCCAATTTTATCACTCT 59.112 40.000 0.00 0.00 0.00 3.24
1357 1398 5.652452 ACCTAGGTTGCCAATTTTATCACTC 59.348 40.000 9.21 0.00 0.00 3.51
1358 1399 5.418840 CACCTAGGTTGCCAATTTTATCACT 59.581 40.000 13.15 0.00 0.00 3.41
1359 1400 5.185056 ACACCTAGGTTGCCAATTTTATCAC 59.815 40.000 13.15 0.00 0.00 3.06
1360 1401 5.329399 ACACCTAGGTTGCCAATTTTATCA 58.671 37.500 13.15 0.00 0.00 2.15
1361 1402 5.914898 ACACCTAGGTTGCCAATTTTATC 57.085 39.130 13.15 0.00 0.00 1.75
1362 1403 5.355910 CGTACACCTAGGTTGCCAATTTTAT 59.644 40.000 13.15 0.00 0.00 1.40
1363 1404 4.696402 CGTACACCTAGGTTGCCAATTTTA 59.304 41.667 13.15 0.00 0.00 1.52
1364 1405 3.504520 CGTACACCTAGGTTGCCAATTTT 59.495 43.478 13.15 0.00 0.00 1.82
1365 1406 3.078837 CGTACACCTAGGTTGCCAATTT 58.921 45.455 13.15 0.00 0.00 1.82
1366 1407 2.706890 CGTACACCTAGGTTGCCAATT 58.293 47.619 13.15 0.00 0.00 2.32
1367 1408 1.677820 GCGTACACCTAGGTTGCCAAT 60.678 52.381 13.15 0.00 0.00 3.16
1368 1409 0.320946 GCGTACACCTAGGTTGCCAA 60.321 55.000 13.15 0.00 0.00 4.52
1369 1410 1.294138 GCGTACACCTAGGTTGCCA 59.706 57.895 13.15 0.00 0.00 4.92
1370 1411 1.808390 CGCGTACACCTAGGTTGCC 60.808 63.158 13.15 1.28 0.00 4.52
1371 1412 2.450345 GCGCGTACACCTAGGTTGC 61.450 63.158 13.15 12.97 0.00 4.17
1372 1413 1.076533 CTGCGCGTACACCTAGGTTG 61.077 60.000 13.15 10.64 0.00 3.77
1373 1414 1.214589 CTGCGCGTACACCTAGGTT 59.785 57.895 13.15 6.76 0.00 3.50
1374 1415 1.676635 TCTGCGCGTACACCTAGGT 60.677 57.895 9.21 9.21 0.00 3.08
1375 1416 1.226603 GTCTGCGCGTACACCTAGG 60.227 63.158 7.41 7.41 0.00 3.02
1376 1417 0.170561 AAGTCTGCGCGTACACCTAG 59.829 55.000 8.43 0.00 0.00 3.02
1377 1418 0.109458 CAAGTCTGCGCGTACACCTA 60.109 55.000 8.43 0.00 0.00 3.08
1378 1419 1.372997 CAAGTCTGCGCGTACACCT 60.373 57.895 8.43 0.00 0.00 4.00
1379 1420 0.387622 TACAAGTCTGCGCGTACACC 60.388 55.000 8.43 0.00 0.00 4.16
1380 1421 1.411394 TTACAAGTCTGCGCGTACAC 58.589 50.000 8.43 0.00 0.00 2.90
1381 1422 1.788308 GTTTACAAGTCTGCGCGTACA 59.212 47.619 8.43 0.00 0.00 2.90
1382 1423 2.056577 AGTTTACAAGTCTGCGCGTAC 58.943 47.619 8.43 2.88 0.00 3.67
1383 1424 2.055838 CAGTTTACAAGTCTGCGCGTA 58.944 47.619 8.43 0.71 0.00 4.42
1384 1425 0.859232 CAGTTTACAAGTCTGCGCGT 59.141 50.000 8.43 0.00 0.00 6.01
1385 1426 1.136690 TCAGTTTACAAGTCTGCGCG 58.863 50.000 0.00 0.00 0.00 6.86
1386 1427 3.289076 GTTTCAGTTTACAAGTCTGCGC 58.711 45.455 0.00 0.00 0.00 6.09
1387 1428 3.531982 CGTTTCAGTTTACAAGTCTGCG 58.468 45.455 0.00 0.00 0.00 5.18
1388 1429 3.558418 TCCGTTTCAGTTTACAAGTCTGC 59.442 43.478 0.00 0.00 0.00 4.26
1389 1430 4.211374 CCTCCGTTTCAGTTTACAAGTCTG 59.789 45.833 0.00 0.00 0.00 3.51
1390 1431 4.377897 CCTCCGTTTCAGTTTACAAGTCT 58.622 43.478 0.00 0.00 0.00 3.24
1391 1432 3.497262 CCCTCCGTTTCAGTTTACAAGTC 59.503 47.826 0.00 0.00 0.00 3.01
1392 1433 3.135167 TCCCTCCGTTTCAGTTTACAAGT 59.865 43.478 0.00 0.00 0.00 3.16
1393 1434 3.735591 TCCCTCCGTTTCAGTTTACAAG 58.264 45.455 0.00 0.00 0.00 3.16
1394 1435 3.135167 ACTCCCTCCGTTTCAGTTTACAA 59.865 43.478 0.00 0.00 0.00 2.41
1395 1436 2.701951 ACTCCCTCCGTTTCAGTTTACA 59.298 45.455 0.00 0.00 0.00 2.41
1396 1437 3.397849 ACTCCCTCCGTTTCAGTTTAC 57.602 47.619 0.00 0.00 0.00 2.01
1397 1438 3.056322 GCTACTCCCTCCGTTTCAGTTTA 60.056 47.826 0.00 0.00 0.00 2.01
1398 1439 2.289506 GCTACTCCCTCCGTTTCAGTTT 60.290 50.000 0.00 0.00 0.00 2.66
1399 1440 1.275573 GCTACTCCCTCCGTTTCAGTT 59.724 52.381 0.00 0.00 0.00 3.16
1400 1441 0.896226 GCTACTCCCTCCGTTTCAGT 59.104 55.000 0.00 0.00 0.00 3.41
1401 1442 1.187087 AGCTACTCCCTCCGTTTCAG 58.813 55.000 0.00 0.00 0.00 3.02
1402 1443 1.640917 AAGCTACTCCCTCCGTTTCA 58.359 50.000 0.00 0.00 0.00 2.69
1403 1444 2.764439 AAAGCTACTCCCTCCGTTTC 57.236 50.000 0.00 0.00 0.00 2.78
1404 1445 4.838904 ATAAAAGCTACTCCCTCCGTTT 57.161 40.909 0.00 0.00 0.00 3.60
1405 1446 4.838904 AATAAAAGCTACTCCCTCCGTT 57.161 40.909 0.00 0.00 0.00 4.44
1406 1447 4.838904 AAATAAAAGCTACTCCCTCCGT 57.161 40.909 0.00 0.00 0.00 4.69
1407 1448 5.915175 ACTAAATAAAAGCTACTCCCTCCG 58.085 41.667 0.00 0.00 0.00 4.63
1408 1449 7.827729 TGAAACTAAATAAAAGCTACTCCCTCC 59.172 37.037 0.00 0.00 0.00 4.30
1409 1450 8.788325 TGAAACTAAATAAAAGCTACTCCCTC 57.212 34.615 0.00 0.00 0.00 4.30
1410 1451 9.755122 ATTGAAACTAAATAAAAGCTACTCCCT 57.245 29.630 0.00 0.00 0.00 4.20
1452 1498 2.433491 TACGTCGGCGCAATGCTT 60.433 55.556 10.50 0.00 45.43 3.91
1453 1499 3.186047 GTACGTCGGCGCAATGCT 61.186 61.111 10.50 0.00 45.43 3.79
1454 1500 3.139118 GAGTACGTCGGCGCAATGC 62.139 63.158 10.50 0.00 42.83 3.56
1455 1501 1.742900 CTGAGTACGTCGGCGCAATG 61.743 60.000 10.50 4.51 42.83 2.82
1456 1502 1.516386 CTGAGTACGTCGGCGCAAT 60.516 57.895 10.50 0.00 42.83 3.56
1457 1503 2.126618 CTGAGTACGTCGGCGCAA 60.127 61.111 10.50 0.00 42.83 4.85
1462 1508 2.202623 GCTGGCTGAGTACGTCGG 60.203 66.667 0.00 0.00 34.18 4.79
1463 1509 2.202623 GGCTGGCTGAGTACGTCG 60.203 66.667 0.00 0.00 0.00 5.12
1464 1510 1.153745 CTGGCTGGCTGAGTACGTC 60.154 63.158 2.00 0.00 0.00 4.34
1465 1511 1.908793 ACTGGCTGGCTGAGTACGT 60.909 57.895 14.79 0.00 0.00 3.57
1466 1512 1.446792 CACTGGCTGGCTGAGTACG 60.447 63.158 14.79 0.00 0.00 3.67
1467 1513 0.390472 GACACTGGCTGGCTGAGTAC 60.390 60.000 14.79 4.33 0.00 2.73
1468 1514 0.542938 AGACACTGGCTGGCTGAGTA 60.543 55.000 14.79 0.00 36.57 2.59
1469 1515 1.840650 AGACACTGGCTGGCTGAGT 60.841 57.895 14.79 12.48 36.57 3.41
1470 1516 3.067091 AGACACTGGCTGGCTGAG 58.933 61.111 14.79 9.32 36.57 3.35
1473 1519 1.674057 GTACAGACACTGGCTGGCT 59.326 57.895 16.60 0.00 39.84 4.75
1474 1520 1.738099 CGTACAGACACTGGCTGGC 60.738 63.158 16.60 7.62 37.69 4.85
1475 1521 1.079819 CCGTACAGACACTGGCTGG 60.080 63.158 16.60 0.00 37.69 4.85
1476 1522 1.079819 CCCGTACAGACACTGGCTG 60.080 63.158 10.63 10.63 35.51 4.85
1477 1523 2.283529 CCCCGTACAGACACTGGCT 61.284 63.158 0.00 0.00 35.51 4.75
1478 1524 2.264794 CCCCGTACAGACACTGGC 59.735 66.667 0.00 0.00 35.51 4.85
1479 1525 1.827399 AAGCCCCGTACAGACACTGG 61.827 60.000 0.00 0.00 35.51 4.00
1480 1526 0.034896 AAAGCCCCGTACAGACACTG 59.965 55.000 0.00 0.00 37.52 3.66
1481 1527 0.034896 CAAAGCCCCGTACAGACACT 59.965 55.000 0.00 0.00 0.00 3.55
1482 1528 0.034337 TCAAAGCCCCGTACAGACAC 59.966 55.000 0.00 0.00 0.00 3.67
1483 1529 0.759959 TTCAAAGCCCCGTACAGACA 59.240 50.000 0.00 0.00 0.00 3.41
1484 1530 1.154197 GTTCAAAGCCCCGTACAGAC 58.846 55.000 0.00 0.00 0.00 3.51
1485 1531 1.053424 AGTTCAAAGCCCCGTACAGA 58.947 50.000 0.00 0.00 0.00 3.41
1486 1532 1.156736 CAGTTCAAAGCCCCGTACAG 58.843 55.000 0.00 0.00 0.00 2.74
1487 1533 0.470766 ACAGTTCAAAGCCCCGTACA 59.529 50.000 0.00 0.00 0.00 2.90
1488 1534 0.872388 CACAGTTCAAAGCCCCGTAC 59.128 55.000 0.00 0.00 0.00 3.67
1489 1535 0.759959 TCACAGTTCAAAGCCCCGTA 59.240 50.000 0.00 0.00 0.00 4.02
1490 1536 0.106918 TTCACAGTTCAAAGCCCCGT 60.107 50.000 0.00 0.00 0.00 5.28
1491 1537 0.310854 GTTCACAGTTCAAAGCCCCG 59.689 55.000 0.00 0.00 0.00 5.73
1492 1538 1.692411 AGTTCACAGTTCAAAGCCCC 58.308 50.000 0.00 0.00 0.00 5.80
1493 1539 3.801114 AAAGTTCACAGTTCAAAGCCC 57.199 42.857 0.00 0.00 0.00 5.19
1513 1559 4.650131 GCTAGAAACCTAGAGCCCTAGAAA 59.350 45.833 3.42 0.00 44.00 2.52
1521 1567 2.700897 TCCCATGCTAGAAACCTAGAGC 59.299 50.000 0.00 0.00 36.58 4.09
1527 1573 5.221441 ACAAAAAGTTCCCATGCTAGAAACC 60.221 40.000 0.00 0.00 0.00 3.27
1530 1576 4.892934 ACACAAAAAGTTCCCATGCTAGAA 59.107 37.500 0.00 0.00 0.00 2.10
1532 1578 4.853924 ACACAAAAAGTTCCCATGCTAG 57.146 40.909 0.00 0.00 0.00 3.42
1533 1579 4.764823 CCTACACAAAAAGTTCCCATGCTA 59.235 41.667 0.00 0.00 0.00 3.49
1535 1581 3.306019 CCCTACACAAAAAGTTCCCATGC 60.306 47.826 0.00 0.00 0.00 4.06
1536 1582 3.895041 ACCCTACACAAAAAGTTCCCATG 59.105 43.478 0.00 0.00 0.00 3.66
1537 1583 4.193240 ACCCTACACAAAAAGTTCCCAT 57.807 40.909 0.00 0.00 0.00 4.00
1538 1584 3.673543 ACCCTACACAAAAAGTTCCCA 57.326 42.857 0.00 0.00 0.00 4.37
1540 1638 3.628942 ACGAACCCTACACAAAAAGTTCC 59.371 43.478 0.00 0.00 32.00 3.62
1542 1640 5.648178 AAACGAACCCTACACAAAAAGTT 57.352 34.783 0.00 0.00 0.00 2.66
1550 1648 7.838771 ACTGATTATAAAACGAACCCTACAC 57.161 36.000 0.00 0.00 0.00 2.90
1607 1707 2.362717 GGAAGTATACTGAGCTCGCCTT 59.637 50.000 9.64 4.34 0.00 4.35
1609 1709 1.335142 CGGAAGTATACTGAGCTCGCC 60.335 57.143 9.64 0.00 0.00 5.54
1611 1711 1.267261 CCCGGAAGTATACTGAGCTCG 59.733 57.143 9.64 6.63 0.00 5.03
1618 1718 3.393426 TCTTCACCCCGGAAGTATACT 57.607 47.619 0.73 0.00 43.72 2.12
1623 1723 1.430992 TTCTTCTTCACCCCGGAAGT 58.569 50.000 0.73 0.00 43.72 3.01
1653 1755 3.670625 TCCGGTCTTCAAGTGTTTATGG 58.329 45.455 0.00 0.00 0.00 2.74
1692 1796 2.904011 TTTGCACGACGAACAAAGTT 57.096 40.000 0.00 0.00 0.00 2.66
1705 1809 3.375782 AGCTGAACCTGAAATTTGCAC 57.624 42.857 0.00 0.00 0.00 4.57
1748 1852 0.747255 AGAATGTCCCGTCCATCTCG 59.253 55.000 0.00 0.00 0.00 4.04
1795 1915 9.199982 ACGATTCACGAAGAGTAAAGATAAAAA 57.800 29.630 0.00 0.00 45.77 1.94
1796 1916 8.644619 CACGATTCACGAAGAGTAAAGATAAAA 58.355 33.333 0.00 0.00 45.77 1.52
1797 1917 7.274904 CCACGATTCACGAAGAGTAAAGATAAA 59.725 37.037 0.00 0.00 45.77 1.40
1798 1918 6.750501 CCACGATTCACGAAGAGTAAAGATAA 59.249 38.462 0.00 0.00 45.77 1.75
1799 1919 6.263344 CCACGATTCACGAAGAGTAAAGATA 58.737 40.000 0.00 0.00 45.77 1.98
1868 1988 2.234908 TGCCTTCTTTCTCCTCTACAGC 59.765 50.000 0.00 0.00 0.00 4.40
1880 2000 4.467438 CCCTCCAATTACAATGCCTTCTTT 59.533 41.667 0.00 0.00 0.00 2.52
1909 2029 1.402259 ACCTCTTGATAGTCGCTGTCG 59.598 52.381 0.80 0.00 0.00 4.35
2018 2138 6.127054 ACACTCTATCCAGTAGCTGCAAAATA 60.127 38.462 4.12 0.00 0.00 1.40
2019 2139 5.121811 CACTCTATCCAGTAGCTGCAAAAT 58.878 41.667 4.12 0.00 0.00 1.82
2021 2141 3.515502 ACACTCTATCCAGTAGCTGCAAA 59.484 43.478 4.12 0.00 0.00 3.68
2141 2261 5.231568 CGACTCCATAAAGTTCACGAATACC 59.768 44.000 0.00 0.00 0.00 2.73
2213 2337 5.195001 TGGTTAGTTTGTCAAAATCTGGC 57.805 39.130 0.75 0.00 0.00 4.85
2313 2449 0.457035 CTGCCCATCAATTGAACCGG 59.543 55.000 13.09 12.85 0.00 5.28
2333 2469 2.176798 TCCCTTTGATCACCAACCTGTT 59.823 45.455 0.00 0.00 33.85 3.16
2443 2580 4.922765 AACCATTTGTTCTAGCAAGGGCG 61.923 47.826 0.00 0.00 37.67 6.13
2479 2616 2.031870 AGAAAAGGTCACAAACAGCCC 58.968 47.619 0.00 0.00 0.00 5.19
2498 2635 7.697691 ACGCATCTGAAAGGTTTTCATAATAG 58.302 34.615 4.85 1.48 0.00 1.73
2499 2636 7.624360 ACGCATCTGAAAGGTTTTCATAATA 57.376 32.000 4.85 0.00 0.00 0.98
2503 2640 5.415701 ACATACGCATCTGAAAGGTTTTCAT 59.584 36.000 4.85 0.00 0.00 2.57
2506 2643 4.759693 TGACATACGCATCTGAAAGGTTTT 59.240 37.500 0.00 0.00 0.00 2.43
2597 2742 7.445121 CCTAGATATGACATTTTACCTGCTCA 58.555 38.462 0.00 0.00 0.00 4.26
2695 2851 9.725019 GTATGAGGAATCATATGTGGTGATAAA 57.275 33.333 1.90 0.00 35.35 1.40
2737 2893 7.065563 TGGCATGGTGAATTTGCATTTAATAAC 59.934 33.333 0.00 0.00 38.12 1.89
2756 2914 0.479815 ATAGGTGGGTCATGGCATGG 59.520 55.000 26.15 8.92 0.00 3.66
2776 2934 7.384115 AGTTGCAACTCATCATTTTCAGAAATG 59.616 33.333 26.36 5.70 43.00 2.32
2777 2935 7.439381 AGTTGCAACTCATCATTTTCAGAAAT 58.561 30.769 26.36 0.00 32.86 2.17
2784 2942 7.416154 CAATGAAGTTGCAACTCATCATTTT 57.584 32.000 35.47 24.38 40.73 1.82
2826 2987 8.301002 TGCAATTTTATTCACCACCTAAAGTAC 58.699 33.333 0.00 0.00 0.00 2.73
2835 2996 7.897575 TGGTTATTGCAATTTTATTCACCAC 57.102 32.000 18.75 0.00 0.00 4.16
2837 2998 7.413988 GCCTTGGTTATTGCAATTTTATTCACC 60.414 37.037 18.75 12.18 0.00 4.02
2855 3016 5.736951 TTAACATTGCTTATGCCTTGGTT 57.263 34.783 0.00 1.26 37.81 3.67
2859 3020 8.525290 AGAACTATTAACATTGCTTATGCCTT 57.475 30.769 0.00 0.00 37.81 4.35
2864 3025 8.292444 TGCCAAGAACTATTAACATTGCTTAT 57.708 30.769 0.00 0.00 0.00 1.73
2868 3029 6.332630 ACATGCCAAGAACTATTAACATTGC 58.667 36.000 0.00 0.00 0.00 3.56
2922 3206 9.559732 CATGAAACTATAACAGGATTCCATGTA 57.440 33.333 5.29 0.00 0.00 2.29
2924 3208 7.013559 TGCATGAAACTATAACAGGATTCCATG 59.986 37.037 5.29 3.27 0.00 3.66
2926 3210 6.422333 TGCATGAAACTATAACAGGATTCCA 58.578 36.000 5.29 0.00 0.00 3.53
3090 3430 5.130477 AGACCCACACTACAGAAAGAAAGAA 59.870 40.000 0.00 0.00 0.00 2.52
3171 3511 2.034558 AGTTTTGACCAATGTTCAGGCG 59.965 45.455 0.00 0.00 0.00 5.52
3205 3545 3.799753 CACATGGGTGTAGCGAGC 58.200 61.111 0.00 0.00 40.24 5.03
3280 3621 1.348538 CGTTATGAGCCGCGTCACAA 61.349 55.000 4.92 0.00 0.00 3.33
3362 3791 7.891498 TGGTAGATAGTGCTATAACTTGACA 57.109 36.000 0.00 0.00 0.00 3.58
3364 3793 9.982651 GAATTGGTAGATAGTGCTATAACTTGA 57.017 33.333 0.00 0.00 0.00 3.02
3395 3824 0.036952 AGGGACTGCAACATCTGTCG 60.037 55.000 0.00 0.00 37.18 4.35
3431 3860 8.289618 CGTCTTGTTTTATATCATGGTAATGGG 58.710 37.037 0.00 0.00 34.30 4.00
3440 3869 7.336931 ACTCTTTGGCGTCTTGTTTTATATCAT 59.663 33.333 0.00 0.00 0.00 2.45
3443 3872 7.305474 CAACTCTTTGGCGTCTTGTTTTATAT 58.695 34.615 0.00 0.00 0.00 0.86
3444 3873 6.293735 CCAACTCTTTGGCGTCTTGTTTTATA 60.294 38.462 0.00 0.00 46.09 0.98
3476 3915 0.462375 TGTCGCACGGCCTGTAATAT 59.538 50.000 0.00 0.00 0.00 1.28
3479 3918 2.048597 CTGTCGCACGGCCTGTAA 60.049 61.111 0.00 0.00 0.00 2.41
3492 3931 2.484651 TCTAGTTCGCTCACTGTCTGTC 59.515 50.000 0.00 0.00 0.00 3.51
3718 4165 0.811616 GTCCGGCCTGACTTGCATAG 60.812 60.000 19.18 0.00 32.39 2.23
3719 4166 1.220749 GTCCGGCCTGACTTGCATA 59.779 57.895 19.18 0.00 32.39 3.14
3720 4167 2.045926 GTCCGGCCTGACTTGCAT 60.046 61.111 19.18 0.00 32.39 3.96
3721 4168 4.680237 CGTCCGGCCTGACTTGCA 62.680 66.667 22.96 0.00 32.97 4.08
3722 4169 3.665675 ATCGTCCGGCCTGACTTGC 62.666 63.158 22.96 0.00 32.97 4.01
3723 4170 1.519455 GATCGTCCGGCCTGACTTG 60.519 63.158 22.96 10.27 32.97 3.16
3724 4171 2.893398 GATCGTCCGGCCTGACTT 59.107 61.111 22.96 11.73 32.97 3.01
3725 4172 3.518998 CGATCGTCCGGCCTGACT 61.519 66.667 22.96 7.23 32.97 3.41
3726 4173 4.570663 CCGATCGTCCGGCCTGAC 62.571 72.222 16.80 16.80 43.25 3.51
3796 4254 5.104569 CCATATTACCAGTTGCCCCAAAAAT 60.105 40.000 0.00 0.00 0.00 1.82
3797 4255 4.223923 CCATATTACCAGTTGCCCCAAAAA 59.776 41.667 0.00 0.00 0.00 1.94
3798 4256 3.772025 CCATATTACCAGTTGCCCCAAAA 59.228 43.478 0.00 0.00 0.00 2.44
3799 4257 3.370104 CCATATTACCAGTTGCCCCAAA 58.630 45.455 0.00 0.00 0.00 3.28
3800 4258 2.358721 CCCATATTACCAGTTGCCCCAA 60.359 50.000 0.00 0.00 0.00 4.12
3804 4262 3.005791 GCAATCCCATATTACCAGTTGCC 59.994 47.826 0.00 0.00 35.83 4.52
3912 4370 4.668837 CACACTTCGGTTACAATTCAAACG 59.331 41.667 1.19 1.19 37.43 3.60
4078 4540 3.838244 ACACTTGAAGTCAGCCAACTA 57.162 42.857 0.00 0.00 0.00 2.24
4082 4544 1.405105 GCAAACACTTGAAGTCAGCCA 59.595 47.619 0.00 0.00 34.14 4.75
4096 4558 5.512232 GGGATGGTTAATTTCTTGGCAAACA 60.512 40.000 0.00 0.00 0.00 2.83
4125 4587 4.060667 GTGGGGTGGGGTGGGATG 62.061 72.222 0.00 0.00 0.00 3.51
4133 4595 4.299796 CTTGTGGGGTGGGGTGGG 62.300 72.222 0.00 0.00 0.00 4.61
4134 4596 3.182263 TCTTGTGGGGTGGGGTGG 61.182 66.667 0.00 0.00 0.00 4.61
4135 4597 2.436109 CTCTTGTGGGGTGGGGTG 59.564 66.667 0.00 0.00 0.00 4.61
4136 4598 2.858974 CCTCTTGTGGGGTGGGGT 60.859 66.667 0.00 0.00 0.00 4.95
4137 4599 3.661648 CCCTCTTGTGGGGTGGGG 61.662 72.222 0.04 0.00 43.45 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.