Multiple sequence alignment - TraesCS2A01G102600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G102600 chr2A 100.000 7199 0 0 1 7199 55949503 55942305 0.000000e+00 13295.0
1 TraesCS2A01G102600 chr2D 95.679 6248 155 44 956 7147 55158962 55152774 0.000000e+00 9936.0
2 TraesCS2A01G102600 chr2D 84.490 490 32 18 4539 4996 406278067 406278544 1.840000e-120 444.0
3 TraesCS2A01G102600 chr2B 94.913 6055 164 50 956 6955 87356148 87350183 0.000000e+00 9343.0
4 TraesCS2A01G102600 chr2B 78.761 452 46 26 544 960 87356613 87356177 2.580000e-64 257.0
5 TraesCS2A01G102600 chr5A 82.222 1035 168 13 5170 6201 640169359 640168338 0.000000e+00 878.0
6 TraesCS2A01G102600 chr5A 79.325 948 158 30 2644 3580 640172197 640171277 1.320000e-176 630.0
7 TraesCS2A01G102600 chr5A 82.781 453 68 7 3693 4141 640171209 640170763 5.230000e-106 396.0
8 TraesCS2A01G102600 chr5A 86.070 201 25 2 2238 2438 640172636 640172439 5.660000e-51 213.0
9 TraesCS2A01G102600 chr5A 86.598 194 25 1 1122 1315 640173492 640173300 5.660000e-51 213.0
10 TraesCS2A01G102600 chr5B 82.115 1040 170 14 5170 6206 642832774 642831748 0.000000e+00 876.0
11 TraesCS2A01G102600 chr5B 78.481 948 168 28 2644 3581 642835200 642834279 8.050000e-164 588.0
12 TraesCS2A01G102600 chr5B 84.091 484 35 17 4545 4996 311558900 311558427 5.160000e-116 429.0
13 TraesCS2A01G102600 chr5B 83.444 453 65 7 3693 4141 642834194 642833748 5.200000e-111 412.0
14 TraesCS2A01G102600 chr5B 86.364 198 26 1 1122 1319 642836492 642836296 1.570000e-51 215.0
15 TraesCS2A01G102600 chr5B 85.572 201 26 2 2238 2438 642835639 642835442 2.630000e-49 207.0
16 TraesCS2A01G102600 chr5D 81.748 1041 172 16 5170 6206 511879538 511878512 0.000000e+00 854.0
17 TraesCS2A01G102600 chr5D 79.114 948 162 28 2644 3581 511881948 511881027 7.930000e-174 621.0
18 TraesCS2A01G102600 chr5D 82.781 453 68 7 3693 4141 511880942 511880496 5.230000e-106 396.0
19 TraesCS2A01G102600 chr5D 86.364 198 26 1 1122 1319 511883247 511883051 1.570000e-51 215.0
20 TraesCS2A01G102600 chr5D 84.653 202 26 4 2238 2438 511882387 511882190 5.700000e-46 196.0
21 TraesCS2A01G102600 chr6B 83.884 484 36 17 4545 4996 126698261 126697788 2.400000e-114 424.0
22 TraesCS2A01G102600 chrUn 82.744 481 48 16 4545 4996 77288959 77288485 5.230000e-106 396.0
23 TraesCS2A01G102600 chr4A 92.661 218 12 3 2450 2667 353126416 353126203 1.950000e-80 311.0
24 TraesCS2A01G102600 chr4A 81.481 189 23 5 2876 3053 697816872 697817059 2.090000e-30 145.0
25 TraesCS2A01G102600 chr4A 88.333 60 6 1 6893 6951 139612326 139612385 3.600000e-08 71.3
26 TraesCS2A01G102600 chr7A 91.781 219 12 4 2448 2666 269093046 269092834 4.220000e-77 300.0
27 TraesCS2A01G102600 chr7A 85.845 219 23 6 1087 1299 627405823 627406039 7.270000e-55 226.0
28 TraesCS2A01G102600 chr4B 90.698 215 18 2 1087 1301 153306314 153306526 1.180000e-72 285.0
29 TraesCS2A01G102600 chr3B 90.355 197 17 2 1087 1283 705447693 705447499 2.580000e-64 257.0
30 TraesCS2A01G102600 chr7D 90.265 113 10 1 1087 1199 139229183 139229072 5.820000e-31 147.0
31 TraesCS2A01G102600 chr6A 96.491 57 2 0 1230 1286 4929430 4929374 2.140000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G102600 chr2A 55942305 55949503 7198 True 13295.0 13295 100.0000 1 7199 1 chr2A.!!$R1 7198
1 TraesCS2A01G102600 chr2D 55152774 55158962 6188 True 9936.0 9936 95.6790 956 7147 1 chr2D.!!$R1 6191
2 TraesCS2A01G102600 chr2B 87350183 87356613 6430 True 4800.0 9343 86.8370 544 6955 2 chr2B.!!$R1 6411
3 TraesCS2A01G102600 chr5A 640168338 640173492 5154 True 466.0 878 83.3992 1122 6201 5 chr5A.!!$R1 5079
4 TraesCS2A01G102600 chr5B 642831748 642836492 4744 True 459.6 876 83.1952 1122 6206 5 chr5B.!!$R2 5084
5 TraesCS2A01G102600 chr5D 511878512 511883247 4735 True 456.4 854 82.9320 1122 6206 5 chr5D.!!$R1 5084

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
388 389 0.031585 GGCGGTTGTGGTTCCTTTTC 59.968 55.000 0.00 0.0 0.00 2.29 F
474 475 0.031994 GTGCCGGCTTGTGATGTTTT 59.968 50.000 29.70 0.0 0.00 2.43 F
765 783 0.037605 AAAACGAACGCGGAGATCCT 60.038 50.000 12.47 0.0 43.17 3.24 F
844 862 0.038744 CTCACCATTGGCCTGTCCTT 59.961 55.000 3.32 0.0 35.26 3.36 F
1104 1201 0.382636 GTTTGACCGCGTCTCGTTTG 60.383 55.000 4.92 0.0 36.19 2.93 F
1312 1411 0.602905 ACAAGCGCCACAGAGGTAAC 60.603 55.000 2.29 0.0 40.61 2.50 F
1437 1552 1.066716 AGCGCACCCGACAAGTTTATA 60.067 47.619 11.47 0.0 36.29 0.98 F
3272 3480 0.329596 ACATTGAACCCAGAGCTCCC 59.670 55.000 10.93 0.0 0.00 4.30 F
3795 4025 1.291877 CTCGTGAAAAGCGTCCTGGG 61.292 60.000 0.00 0.0 0.00 4.45 F
4163 4398 4.380973 CGCAGTTCTCTCCTGAATTCACTA 60.381 45.833 3.38 0.0 31.38 2.74 F
5123 5889 4.641541 TGCAAATGATATGTCTCAGTTGGG 59.358 41.667 13.87 0.0 46.13 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1510 1634 0.108472 GGGAACCGTCCGACCTTTAG 60.108 60.000 0.00 0.0 46.04 1.85 R
2263 2428 1.202290 GCAACATTCCCAATACTGCCG 60.202 52.381 0.00 0.0 0.00 5.69 R
2441 2606 2.619931 TGAATGTGAAGAGGAGGGTGA 58.380 47.619 0.00 0.0 0.00 4.02 R
2525 2690 3.624777 AGCTGTGCAAGTATAAAGGCAT 58.375 40.909 0.00 0.0 38.68 4.40 R
2940 3146 5.059833 ACAAAGTCTCTGCTTCAACTAAGG 58.940 41.667 0.00 0.0 35.58 2.69 R
3272 3480 7.221838 TCAATTTTCTGGCAAAAGTAAAACTCG 59.778 33.333 0.00 0.0 0.00 4.18 R
3460 3668 6.712547 CCTTAGAAACTAGGGCATTTATCCTG 59.287 42.308 0.00 0.0 34.75 3.86 R
4606 4841 1.331756 CAATAACTGCTGCGGATGACC 59.668 52.381 16.72 0.0 0.00 4.02 R
4613 4848 5.023920 CAGAAATGTACAATAACTGCTGCG 58.976 41.667 0.00 0.0 0.00 5.18 R
5943 6709 0.249120 TGTTGATGGCGTAGGAGGTG 59.751 55.000 0.00 0.0 0.00 4.00 R
6251 7017 1.871080 AAATATTCTCTGGCTCCGCG 58.129 50.000 0.00 0.0 0.00 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.294416 TGTTTTTGGGTAACACATGTCG 57.706 40.909 0.00 0.00 39.74 4.35
24 25 3.695060 TGTTTTTGGGTAACACATGTCGT 59.305 39.130 0.00 0.00 39.74 4.34
36 37 4.745170 CACATGTCGTGTTTCTATCGAG 57.255 45.455 0.00 0.00 39.62 4.04
37 38 3.547868 CACATGTCGTGTTTCTATCGAGG 59.452 47.826 0.00 0.00 39.62 4.63
38 39 2.273370 TGTCGTGTTTCTATCGAGGC 57.727 50.000 0.00 0.00 34.33 4.70
39 40 1.542472 TGTCGTGTTTCTATCGAGGCA 59.458 47.619 0.00 0.00 34.33 4.75
40 41 1.918609 GTCGTGTTTCTATCGAGGCAC 59.081 52.381 0.00 0.00 34.33 5.01
41 42 1.542472 TCGTGTTTCTATCGAGGCACA 59.458 47.619 0.00 0.00 0.00 4.57
42 43 2.029739 TCGTGTTTCTATCGAGGCACAA 60.030 45.455 0.00 0.00 0.00 3.33
43 44 2.930040 CGTGTTTCTATCGAGGCACAAT 59.070 45.455 0.00 0.00 0.00 2.71
44 45 3.000322 CGTGTTTCTATCGAGGCACAATC 60.000 47.826 0.00 0.00 0.00 2.67
45 46 3.932710 GTGTTTCTATCGAGGCACAATCA 59.067 43.478 0.00 0.00 0.00 2.57
46 47 4.572389 GTGTTTCTATCGAGGCACAATCAT 59.428 41.667 0.00 0.00 0.00 2.45
47 48 5.753438 GTGTTTCTATCGAGGCACAATCATA 59.247 40.000 0.00 0.00 0.00 2.15
48 49 6.425114 GTGTTTCTATCGAGGCACAATCATAT 59.575 38.462 0.00 0.00 0.00 1.78
49 50 6.424812 TGTTTCTATCGAGGCACAATCATATG 59.575 38.462 0.00 0.00 0.00 1.78
50 51 5.728637 TCTATCGAGGCACAATCATATGT 57.271 39.130 1.90 0.00 0.00 2.29
62 63 6.615264 ACAATCATATGTGATGACTTCAGC 57.385 37.500 5.64 0.00 44.20 4.26
63 64 5.235831 ACAATCATATGTGATGACTTCAGCG 59.764 40.000 5.64 0.00 44.20 5.18
64 65 4.654091 TCATATGTGATGACTTCAGCGA 57.346 40.909 1.90 0.00 34.17 4.93
65 66 5.205759 TCATATGTGATGACTTCAGCGAT 57.794 39.130 1.90 0.00 34.17 4.58
66 67 5.225642 TCATATGTGATGACTTCAGCGATC 58.774 41.667 1.90 0.00 34.17 3.69
67 68 3.815856 ATGTGATGACTTCAGCGATCT 57.184 42.857 0.00 0.00 34.17 2.75
68 69 3.599730 TGTGATGACTTCAGCGATCTT 57.400 42.857 0.00 0.00 34.17 2.40
69 70 3.256558 TGTGATGACTTCAGCGATCTTG 58.743 45.455 0.00 0.00 34.17 3.02
70 71 2.606725 GTGATGACTTCAGCGATCTTGG 59.393 50.000 0.00 0.00 34.17 3.61
71 72 2.208431 GATGACTTCAGCGATCTTGGG 58.792 52.381 0.00 0.00 0.00 4.12
72 73 0.976641 TGACTTCAGCGATCTTGGGT 59.023 50.000 0.00 0.00 0.00 4.51
73 74 2.176045 TGACTTCAGCGATCTTGGGTA 58.824 47.619 0.00 0.00 0.00 3.69
74 75 2.166459 TGACTTCAGCGATCTTGGGTAG 59.834 50.000 0.00 0.00 0.00 3.18
75 76 2.427453 GACTTCAGCGATCTTGGGTAGA 59.573 50.000 0.00 0.00 37.28 2.59
76 77 3.034635 ACTTCAGCGATCTTGGGTAGAT 58.965 45.455 0.00 0.00 46.41 1.98
77 78 3.181471 ACTTCAGCGATCTTGGGTAGATG 60.181 47.826 0.00 0.00 43.75 2.90
78 79 1.069204 TCAGCGATCTTGGGTAGATGC 59.931 52.381 0.00 0.00 43.75 3.91
79 80 1.069823 CAGCGATCTTGGGTAGATGCT 59.930 52.381 0.00 0.00 43.75 3.79
80 81 2.297315 CAGCGATCTTGGGTAGATGCTA 59.703 50.000 0.00 0.00 43.75 3.49
81 82 2.297597 AGCGATCTTGGGTAGATGCTAC 59.702 50.000 0.00 0.00 43.75 3.58
82 83 2.922758 GCGATCTTGGGTAGATGCTACG 60.923 54.545 0.00 0.00 43.75 3.51
83 84 2.351835 CGATCTTGGGTAGATGCTACGG 60.352 54.545 0.00 0.00 43.75 4.02
84 85 1.410004 TCTTGGGTAGATGCTACGGG 58.590 55.000 0.00 0.00 0.00 5.28
85 86 1.063492 TCTTGGGTAGATGCTACGGGA 60.063 52.381 0.00 0.00 0.00 5.14
86 87 1.341531 CTTGGGTAGATGCTACGGGAG 59.658 57.143 0.00 0.00 0.00 4.30
87 88 6.779571 ATCTTGGGTAGATGCTACGGGAGT 62.780 50.000 0.00 0.00 42.11 3.85
88 89 1.342674 TGGGTAGATGCTACGGGAGTT 60.343 52.381 0.00 0.00 43.33 3.01
89 90 1.068741 GGGTAGATGCTACGGGAGTTG 59.931 57.143 0.00 0.00 43.33 3.16
90 91 1.755380 GGTAGATGCTACGGGAGTTGT 59.245 52.381 0.00 0.00 43.33 3.32
91 92 2.481449 GGTAGATGCTACGGGAGTTGTG 60.481 54.545 0.00 0.00 43.33 3.33
92 93 1.267121 AGATGCTACGGGAGTTGTGT 58.733 50.000 0.00 0.00 43.33 3.72
93 94 1.066858 AGATGCTACGGGAGTTGTGTG 60.067 52.381 0.00 0.00 43.33 3.82
94 95 0.673644 ATGCTACGGGAGTTGTGTGC 60.674 55.000 0.00 0.00 43.33 4.57
95 96 1.301401 GCTACGGGAGTTGTGTGCA 60.301 57.895 0.00 0.00 43.33 4.57
96 97 0.673644 GCTACGGGAGTTGTGTGCAT 60.674 55.000 0.00 0.00 43.33 3.96
97 98 1.078709 CTACGGGAGTTGTGTGCATG 58.921 55.000 0.00 0.00 43.33 4.06
98 99 0.394938 TACGGGAGTTGTGTGCATGT 59.605 50.000 0.00 0.00 43.33 3.21
99 100 1.165907 ACGGGAGTTGTGTGCATGTG 61.166 55.000 0.00 0.00 43.33 3.21
100 101 0.884259 CGGGAGTTGTGTGCATGTGA 60.884 55.000 0.00 0.00 0.00 3.58
101 102 1.538047 GGGAGTTGTGTGCATGTGAT 58.462 50.000 0.00 0.00 0.00 3.06
102 103 1.200716 GGGAGTTGTGTGCATGTGATG 59.799 52.381 0.00 0.00 0.00 3.07
103 104 2.153645 GGAGTTGTGTGCATGTGATGA 58.846 47.619 0.00 0.00 0.00 2.92
104 105 2.751259 GGAGTTGTGTGCATGTGATGAT 59.249 45.455 0.00 0.00 0.00 2.45
105 106 3.427098 GGAGTTGTGTGCATGTGATGATG 60.427 47.826 0.00 0.00 0.00 3.07
106 107 3.151554 AGTTGTGTGCATGTGATGATGT 58.848 40.909 0.00 0.00 0.00 3.06
107 108 3.057806 AGTTGTGTGCATGTGATGATGTG 60.058 43.478 0.00 0.00 0.00 3.21
108 109 1.200484 TGTGTGCATGTGATGATGTGC 59.800 47.619 0.00 0.00 38.05 4.57
109 110 1.200484 GTGTGCATGTGATGATGTGCA 59.800 47.619 0.00 0.00 44.50 4.57
111 112 2.640346 TGCATGTGATGATGTGCAAC 57.360 45.000 0.00 0.00 43.83 4.17
112 113 2.164338 TGCATGTGATGATGTGCAACT 58.836 42.857 0.00 0.00 43.83 3.16
113 114 2.094957 TGCATGTGATGATGTGCAACTG 60.095 45.455 0.00 0.00 43.83 3.16
114 115 2.526077 CATGTGATGATGTGCAACTGC 58.474 47.619 0.00 0.00 38.04 4.40
115 116 0.518195 TGTGATGATGTGCAACTGCG 59.482 50.000 0.00 0.00 45.83 5.18
139 140 9.882996 GCGCATGCATATATACATTTACATATT 57.117 29.630 19.57 0.00 42.15 1.28
152 153 8.263940 ACATTTACATATTATATGACGTGGCC 57.736 34.615 17.95 0.00 0.00 5.36
153 154 8.100791 ACATTTACATATTATATGACGTGGCCT 58.899 33.333 17.95 0.00 0.00 5.19
154 155 9.594478 CATTTACATATTATATGACGTGGCCTA 57.406 33.333 17.95 0.00 0.00 3.93
155 156 8.991243 TTTACATATTATATGACGTGGCCTAC 57.009 34.615 17.95 0.00 0.00 3.18
156 157 6.599356 ACATATTATATGACGTGGCCTACA 57.401 37.500 17.95 0.00 0.00 2.74
157 158 6.999950 ACATATTATATGACGTGGCCTACAA 58.000 36.000 17.95 0.00 0.00 2.41
158 159 7.446769 ACATATTATATGACGTGGCCTACAAA 58.553 34.615 17.95 0.00 0.00 2.83
159 160 7.602644 ACATATTATATGACGTGGCCTACAAAG 59.397 37.037 17.95 0.00 0.00 2.77
160 161 2.684001 TATGACGTGGCCTACAAAGG 57.316 50.000 3.32 0.00 46.76 3.11
161 162 0.035439 ATGACGTGGCCTACAAAGGG 60.035 55.000 3.32 0.00 43.87 3.95
162 163 1.122632 TGACGTGGCCTACAAAGGGA 61.123 55.000 3.32 0.00 43.87 4.20
163 164 0.035739 GACGTGGCCTACAAAGGGAA 59.964 55.000 3.32 0.00 43.87 3.97
164 165 0.696501 ACGTGGCCTACAAAGGGAAT 59.303 50.000 3.32 0.00 43.87 3.01
165 166 1.910671 ACGTGGCCTACAAAGGGAATA 59.089 47.619 3.32 0.00 43.87 1.75
166 167 2.508300 ACGTGGCCTACAAAGGGAATAT 59.492 45.455 3.32 0.00 43.87 1.28
167 168 3.712733 ACGTGGCCTACAAAGGGAATATA 59.287 43.478 3.32 0.00 43.87 0.86
168 169 4.164604 ACGTGGCCTACAAAGGGAATATAA 59.835 41.667 3.32 0.00 43.87 0.98
169 170 4.755123 CGTGGCCTACAAAGGGAATATAAG 59.245 45.833 3.32 0.00 43.87 1.73
170 171 4.519350 GTGGCCTACAAAGGGAATATAAGC 59.481 45.833 3.32 0.00 43.87 3.09
171 172 4.167113 TGGCCTACAAAGGGAATATAAGCA 59.833 41.667 3.32 0.00 43.87 3.91
172 173 4.519350 GGCCTACAAAGGGAATATAAGCAC 59.481 45.833 0.00 0.00 43.87 4.40
173 174 4.213482 GCCTACAAAGGGAATATAAGCACG 59.787 45.833 0.00 0.00 43.87 5.34
174 175 4.755123 CCTACAAAGGGAATATAAGCACGG 59.245 45.833 0.00 0.00 39.48 4.94
175 176 2.949644 ACAAAGGGAATATAAGCACGGC 59.050 45.455 0.00 0.00 0.00 5.68
176 177 1.878953 AAGGGAATATAAGCACGGCG 58.121 50.000 4.80 4.80 0.00 6.46
177 178 1.045407 AGGGAATATAAGCACGGCGA 58.955 50.000 16.62 0.00 0.00 5.54
178 179 1.414919 AGGGAATATAAGCACGGCGAA 59.585 47.619 16.62 0.00 0.00 4.70
179 180 2.038557 AGGGAATATAAGCACGGCGAAT 59.961 45.455 16.62 1.21 0.00 3.34
180 181 3.259876 AGGGAATATAAGCACGGCGAATA 59.740 43.478 16.62 3.59 0.00 1.75
181 182 3.998341 GGGAATATAAGCACGGCGAATAA 59.002 43.478 16.62 0.00 0.00 1.40
182 183 4.092968 GGGAATATAAGCACGGCGAATAAG 59.907 45.833 16.62 0.00 0.00 1.73
183 184 4.927425 GGAATATAAGCACGGCGAATAAGA 59.073 41.667 16.62 0.00 0.00 2.10
184 185 5.062308 GGAATATAAGCACGGCGAATAAGAG 59.938 44.000 16.62 0.00 0.00 2.85
185 186 3.728076 ATAAGCACGGCGAATAAGAGA 57.272 42.857 16.62 0.00 0.00 3.10
186 187 2.380084 AAGCACGGCGAATAAGAGAA 57.620 45.000 16.62 0.00 0.00 2.87
187 188 2.604046 AGCACGGCGAATAAGAGAAT 57.396 45.000 16.62 0.00 0.00 2.40
188 189 2.205074 AGCACGGCGAATAAGAGAATG 58.795 47.619 16.62 0.00 0.00 2.67
189 190 1.261619 GCACGGCGAATAAGAGAATGG 59.738 52.381 16.62 0.00 0.00 3.16
190 191 1.867233 CACGGCGAATAAGAGAATGGG 59.133 52.381 16.62 0.00 0.00 4.00
191 192 0.868406 CGGCGAATAAGAGAATGGGC 59.132 55.000 0.00 0.00 0.00 5.36
192 193 1.810031 CGGCGAATAAGAGAATGGGCA 60.810 52.381 0.00 0.00 0.00 5.36
193 194 2.297701 GGCGAATAAGAGAATGGGCAA 58.702 47.619 0.00 0.00 0.00 4.52
194 195 2.687935 GGCGAATAAGAGAATGGGCAAA 59.312 45.455 0.00 0.00 0.00 3.68
195 196 3.130340 GGCGAATAAGAGAATGGGCAAAA 59.870 43.478 0.00 0.00 0.00 2.44
196 197 4.381505 GGCGAATAAGAGAATGGGCAAAAA 60.382 41.667 0.00 0.00 0.00 1.94
213 214 3.993658 AAAAAGGAGAAAGGGGAAGGT 57.006 42.857 0.00 0.00 0.00 3.50
214 215 2.980246 AAAGGAGAAAGGGGAAGGTG 57.020 50.000 0.00 0.00 0.00 4.00
215 216 0.405973 AAGGAGAAAGGGGAAGGTGC 59.594 55.000 0.00 0.00 0.00 5.01
216 217 1.000771 GGAGAAAGGGGAAGGTGCC 60.001 63.158 0.00 0.00 0.00 5.01
223 224 4.176752 GGGAAGGTGCCCGGCTAG 62.177 72.222 11.61 0.00 38.58 3.42
224 225 3.400054 GGAAGGTGCCCGGCTAGT 61.400 66.667 11.61 0.00 0.00 2.57
225 226 2.669240 GAAGGTGCCCGGCTAGTT 59.331 61.111 11.61 0.49 0.00 2.24
226 227 1.619807 GGAAGGTGCCCGGCTAGTTA 61.620 60.000 11.61 0.00 0.00 2.24
227 228 0.179081 GAAGGTGCCCGGCTAGTTAG 60.179 60.000 11.61 0.00 0.00 2.34
228 229 0.908180 AAGGTGCCCGGCTAGTTAGT 60.908 55.000 11.61 0.00 0.00 2.24
229 230 1.153429 GGTGCCCGGCTAGTTAGTG 60.153 63.158 11.61 0.00 0.00 2.74
230 231 1.595357 GTGCCCGGCTAGTTAGTGT 59.405 57.895 11.61 0.00 0.00 3.55
231 232 0.739813 GTGCCCGGCTAGTTAGTGTG 60.740 60.000 11.61 0.00 0.00 3.82
232 233 1.153429 GCCCGGCTAGTTAGTGTGG 60.153 63.158 0.71 0.00 0.00 4.17
233 234 1.153429 CCCGGCTAGTTAGTGTGGC 60.153 63.158 0.00 0.00 0.00 5.01
234 235 1.153429 CCGGCTAGTTAGTGTGGCC 60.153 63.158 0.00 0.00 39.43 5.36
235 236 4.515404 GGCTAGTTAGTGTGGCCG 57.485 61.111 0.00 0.00 33.30 6.13
236 237 1.895238 GGCTAGTTAGTGTGGCCGA 59.105 57.895 0.00 0.00 33.30 5.54
237 238 0.459759 GGCTAGTTAGTGTGGCCGAC 60.460 60.000 0.00 0.00 33.30 4.79
238 239 0.801067 GCTAGTTAGTGTGGCCGACG 60.801 60.000 0.00 0.00 0.00 5.12
239 240 0.179145 CTAGTTAGTGTGGCCGACGG 60.179 60.000 10.29 10.29 0.00 4.79
255 256 4.803426 GGCGCTGTGGAGTCGGAG 62.803 72.222 7.64 0.00 0.00 4.63
256 257 3.749064 GCGCTGTGGAGTCGGAGA 61.749 66.667 0.00 0.00 0.00 3.71
257 258 2.962569 CGCTGTGGAGTCGGAGAA 59.037 61.111 0.00 0.00 39.69 2.87
258 259 1.513158 CGCTGTGGAGTCGGAGAAT 59.487 57.895 0.00 0.00 39.69 2.40
259 260 0.108615 CGCTGTGGAGTCGGAGAATT 60.109 55.000 0.00 0.00 39.69 2.17
260 261 1.363744 GCTGTGGAGTCGGAGAATTG 58.636 55.000 0.00 0.00 39.69 2.32
261 262 1.363744 CTGTGGAGTCGGAGAATTGC 58.636 55.000 0.00 0.00 39.69 3.56
262 263 0.684535 TGTGGAGTCGGAGAATTGCA 59.315 50.000 0.00 0.00 39.69 4.08
263 264 1.079503 GTGGAGTCGGAGAATTGCAC 58.920 55.000 0.00 0.00 39.69 4.57
264 265 0.684535 TGGAGTCGGAGAATTGCACA 59.315 50.000 0.00 0.00 39.69 4.57
265 266 1.338105 TGGAGTCGGAGAATTGCACAG 60.338 52.381 0.00 0.00 39.69 3.66
266 267 1.338200 GGAGTCGGAGAATTGCACAGT 60.338 52.381 0.00 0.00 39.69 3.55
267 268 1.728971 GAGTCGGAGAATTGCACAGTG 59.271 52.381 0.00 0.00 39.69 3.66
268 269 1.070758 AGTCGGAGAATTGCACAGTGT 59.929 47.619 1.61 0.00 39.69 3.55
269 270 1.873591 GTCGGAGAATTGCACAGTGTT 59.126 47.619 1.61 0.00 39.69 3.32
270 271 3.064207 GTCGGAGAATTGCACAGTGTTA 58.936 45.455 1.61 0.00 39.69 2.41
271 272 3.064207 TCGGAGAATTGCACAGTGTTAC 58.936 45.455 1.61 0.00 0.00 2.50
272 273 2.159627 CGGAGAATTGCACAGTGTTACC 59.840 50.000 1.61 0.00 0.00 2.85
273 274 2.488153 GGAGAATTGCACAGTGTTACCC 59.512 50.000 1.61 0.00 0.00 3.69
274 275 3.412386 GAGAATTGCACAGTGTTACCCT 58.588 45.455 1.61 0.00 0.00 4.34
275 276 3.821033 GAGAATTGCACAGTGTTACCCTT 59.179 43.478 1.61 0.00 0.00 3.95
276 277 4.215109 AGAATTGCACAGTGTTACCCTTT 58.785 39.130 1.61 0.00 0.00 3.11
277 278 4.037923 AGAATTGCACAGTGTTACCCTTTG 59.962 41.667 1.61 0.00 0.00 2.77
278 279 1.686355 TGCACAGTGTTACCCTTTGG 58.314 50.000 1.61 0.00 37.80 3.28
279 280 0.313987 GCACAGTGTTACCCTTTGGC 59.686 55.000 1.61 0.00 33.59 4.52
280 281 1.981256 CACAGTGTTACCCTTTGGCT 58.019 50.000 0.00 0.00 33.59 4.75
281 282 2.306847 CACAGTGTTACCCTTTGGCTT 58.693 47.619 0.00 0.00 33.59 4.35
282 283 2.034558 CACAGTGTTACCCTTTGGCTTG 59.965 50.000 0.00 0.00 33.59 4.01
283 284 2.306847 CAGTGTTACCCTTTGGCTTGT 58.693 47.619 0.00 0.00 33.59 3.16
284 285 3.117813 ACAGTGTTACCCTTTGGCTTGTA 60.118 43.478 0.00 0.00 33.59 2.41
285 286 4.079253 CAGTGTTACCCTTTGGCTTGTAT 58.921 43.478 0.00 0.00 33.59 2.29
286 287 4.522789 CAGTGTTACCCTTTGGCTTGTATT 59.477 41.667 0.00 0.00 33.59 1.89
287 288 5.708230 CAGTGTTACCCTTTGGCTTGTATTA 59.292 40.000 0.00 0.00 33.59 0.98
288 289 6.207810 CAGTGTTACCCTTTGGCTTGTATTAA 59.792 38.462 0.00 0.00 33.59 1.40
289 290 6.778559 AGTGTTACCCTTTGGCTTGTATTAAA 59.221 34.615 0.00 0.00 33.59 1.52
290 291 7.453439 AGTGTTACCCTTTGGCTTGTATTAAAT 59.547 33.333 0.00 0.00 33.59 1.40
291 292 8.092068 GTGTTACCCTTTGGCTTGTATTAAATT 58.908 33.333 0.00 0.00 33.59 1.82
292 293 8.652290 TGTTACCCTTTGGCTTGTATTAAATTT 58.348 29.630 0.00 0.00 33.59 1.82
293 294 8.931775 GTTACCCTTTGGCTTGTATTAAATTTG 58.068 33.333 0.00 0.00 33.59 2.32
294 295 7.309770 ACCCTTTGGCTTGTATTAAATTTGA 57.690 32.000 0.00 0.00 33.59 2.69
295 296 7.917003 ACCCTTTGGCTTGTATTAAATTTGAT 58.083 30.769 0.00 0.19 33.59 2.57
296 297 9.041354 ACCCTTTGGCTTGTATTAAATTTGATA 57.959 29.630 0.00 0.00 33.59 2.15
333 334 9.974980 TTCATTTATTTTGTCTAAAAGTCCCAC 57.025 29.630 0.00 0.00 39.01 4.61
334 335 8.293867 TCATTTATTTTGTCTAAAAGTCCCACG 58.706 33.333 0.00 0.00 39.01 4.94
335 336 7.804843 TTTATTTTGTCTAAAAGTCCCACGA 57.195 32.000 0.00 0.00 39.01 4.35
336 337 5.684550 ATTTTGTCTAAAAGTCCCACGAC 57.315 39.130 0.00 0.00 39.01 4.34
337 338 2.825861 TGTCTAAAAGTCCCACGACC 57.174 50.000 0.00 0.00 40.12 4.79
338 339 1.345415 TGTCTAAAAGTCCCACGACCC 59.655 52.381 0.00 0.00 40.12 4.46
339 340 1.622312 GTCTAAAAGTCCCACGACCCT 59.378 52.381 0.00 0.00 40.12 4.34
340 341 2.038164 GTCTAAAAGTCCCACGACCCTT 59.962 50.000 0.00 0.00 40.12 3.95
341 342 2.707257 TCTAAAAGTCCCACGACCCTTT 59.293 45.455 0.00 0.00 40.12 3.11
342 343 1.687563 AAAAGTCCCACGACCCTTTG 58.312 50.000 0.00 0.00 40.12 2.77
343 344 0.179001 AAAGTCCCACGACCCTTTGG 60.179 55.000 0.00 0.00 40.12 3.28
344 345 2.671963 GTCCCACGACCCTTTGGC 60.672 66.667 0.00 0.00 32.40 4.52
345 346 2.852075 TCCCACGACCCTTTGGCT 60.852 61.111 0.00 0.00 33.59 4.75
346 347 2.115266 CCCACGACCCTTTGGCTT 59.885 61.111 0.00 0.00 33.59 4.35
347 348 2.268076 CCCACGACCCTTTGGCTTG 61.268 63.158 0.00 0.00 33.59 4.01
348 349 1.228124 CCACGACCCTTTGGCTTGA 60.228 57.895 0.00 0.00 33.59 3.02
349 350 0.821711 CCACGACCCTTTGGCTTGAA 60.822 55.000 0.00 0.00 33.59 2.69
350 351 0.310854 CACGACCCTTTGGCTTGAAC 59.689 55.000 0.00 0.00 33.59 3.18
351 352 0.822121 ACGACCCTTTGGCTTGAACC 60.822 55.000 0.00 0.00 33.59 3.62
352 353 0.821711 CGACCCTTTGGCTTGAACCA 60.822 55.000 0.00 0.00 38.16 3.67
353 354 0.961753 GACCCTTTGGCTTGAACCAG 59.038 55.000 0.00 0.00 41.82 4.00
354 355 0.469892 ACCCTTTGGCTTGAACCAGG 60.470 55.000 0.00 0.00 41.82 4.45
355 356 0.178964 CCCTTTGGCTTGAACCAGGA 60.179 55.000 0.00 0.00 41.82 3.86
356 357 1.550869 CCCTTTGGCTTGAACCAGGAT 60.551 52.381 0.00 0.00 41.82 3.24
357 358 1.547372 CCTTTGGCTTGAACCAGGATG 59.453 52.381 0.00 0.00 41.82 3.51
358 359 2.517959 CTTTGGCTTGAACCAGGATGA 58.482 47.619 0.00 0.00 41.82 2.92
359 360 2.673775 TTGGCTTGAACCAGGATGAA 57.326 45.000 0.00 0.00 41.82 2.57
360 361 2.905415 TGGCTTGAACCAGGATGAAT 57.095 45.000 0.00 0.00 39.69 2.57
361 362 2.449464 TGGCTTGAACCAGGATGAATG 58.551 47.619 0.00 0.00 39.69 2.67
362 363 2.041485 TGGCTTGAACCAGGATGAATGA 59.959 45.455 0.00 0.00 39.69 2.57
363 364 3.091545 GGCTTGAACCAGGATGAATGAA 58.908 45.455 0.00 0.00 39.69 2.57
364 365 3.703052 GGCTTGAACCAGGATGAATGAAT 59.297 43.478 0.00 0.00 39.69 2.57
365 366 4.161001 GGCTTGAACCAGGATGAATGAATT 59.839 41.667 0.00 0.00 39.69 2.17
366 367 5.107133 GCTTGAACCAGGATGAATGAATTG 58.893 41.667 0.00 0.00 39.69 2.32
367 368 5.337009 GCTTGAACCAGGATGAATGAATTGT 60.337 40.000 0.00 0.00 39.69 2.71
368 369 6.669125 TTGAACCAGGATGAATGAATTGTT 57.331 33.333 0.00 0.00 39.69 2.83
369 370 6.028146 TGAACCAGGATGAATGAATTGTTG 57.972 37.500 0.00 0.00 39.69 3.33
370 371 5.047164 TGAACCAGGATGAATGAATTGTTGG 60.047 40.000 0.00 0.00 39.69 3.77
371 372 3.196254 ACCAGGATGAATGAATTGTTGGC 59.804 43.478 0.00 0.00 39.69 4.52
372 373 3.441163 CAGGATGAATGAATTGTTGGCG 58.559 45.455 0.00 0.00 39.69 5.69
373 374 2.428171 AGGATGAATGAATTGTTGGCGG 59.572 45.455 0.00 0.00 0.00 6.13
374 375 2.166254 GGATGAATGAATTGTTGGCGGT 59.834 45.455 0.00 0.00 0.00 5.68
375 376 3.368323 GGATGAATGAATTGTTGGCGGTT 60.368 43.478 0.00 0.00 0.00 4.44
376 377 3.023946 TGAATGAATTGTTGGCGGTTG 57.976 42.857 0.00 0.00 0.00 3.77
377 378 2.363680 TGAATGAATTGTTGGCGGTTGT 59.636 40.909 0.00 0.00 0.00 3.32
378 379 2.437200 ATGAATTGTTGGCGGTTGTG 57.563 45.000 0.00 0.00 0.00 3.33
379 380 0.387202 TGAATTGTTGGCGGTTGTGG 59.613 50.000 0.00 0.00 0.00 4.17
380 381 0.387565 GAATTGTTGGCGGTTGTGGT 59.612 50.000 0.00 0.00 0.00 4.16
381 382 0.827368 AATTGTTGGCGGTTGTGGTT 59.173 45.000 0.00 0.00 0.00 3.67
382 383 0.387565 ATTGTTGGCGGTTGTGGTTC 59.612 50.000 0.00 0.00 0.00 3.62
383 384 1.668101 TTGTTGGCGGTTGTGGTTCC 61.668 55.000 0.00 0.00 0.00 3.62
384 385 1.826487 GTTGGCGGTTGTGGTTCCT 60.826 57.895 0.00 0.00 0.00 3.36
385 386 1.076632 TTGGCGGTTGTGGTTCCTT 60.077 52.632 0.00 0.00 0.00 3.36
386 387 0.684805 TTGGCGGTTGTGGTTCCTTT 60.685 50.000 0.00 0.00 0.00 3.11
387 388 0.684805 TGGCGGTTGTGGTTCCTTTT 60.685 50.000 0.00 0.00 0.00 2.27
388 389 0.031585 GGCGGTTGTGGTTCCTTTTC 59.968 55.000 0.00 0.00 0.00 2.29
389 390 1.029681 GCGGTTGTGGTTCCTTTTCT 58.970 50.000 0.00 0.00 0.00 2.52
390 391 1.269051 GCGGTTGTGGTTCCTTTTCTG 60.269 52.381 0.00 0.00 0.00 3.02
391 392 2.294074 CGGTTGTGGTTCCTTTTCTGA 58.706 47.619 0.00 0.00 0.00 3.27
392 393 2.685897 CGGTTGTGGTTCCTTTTCTGAA 59.314 45.455 0.00 0.00 0.00 3.02
393 394 3.317993 CGGTTGTGGTTCCTTTTCTGAAT 59.682 43.478 0.00 0.00 0.00 2.57
394 395 4.620982 GGTTGTGGTTCCTTTTCTGAATG 58.379 43.478 0.00 0.00 0.00 2.67
395 396 4.340950 GGTTGTGGTTCCTTTTCTGAATGA 59.659 41.667 0.00 0.00 0.00 2.57
396 397 5.163457 GGTTGTGGTTCCTTTTCTGAATGAA 60.163 40.000 0.00 0.00 0.00 2.57
397 398 6.337356 GTTGTGGTTCCTTTTCTGAATGAAA 58.663 36.000 0.00 0.00 42.33 2.69
415 416 1.927487 AAAAATGGTACCGGGGGTTC 58.073 50.000 6.32 0.00 37.09 3.62
416 417 0.040058 AAAATGGTACCGGGGGTTCC 59.960 55.000 6.32 3.71 42.45 3.62
418 419 2.929477 TGGTACCGGGGGTTCCAC 60.929 66.667 6.32 0.00 45.85 4.02
419 420 3.720601 GGTACCGGGGGTTCCACC 61.721 72.222 6.32 0.00 41.84 4.61
431 432 3.014304 GGTTCCACCCCTCTTATTTCC 57.986 52.381 0.00 0.00 30.04 3.13
432 433 2.310647 GGTTCCACCCCTCTTATTTCCA 59.689 50.000 0.00 0.00 30.04 3.53
433 434 3.353557 GTTCCACCCCTCTTATTTCCAC 58.646 50.000 0.00 0.00 0.00 4.02
434 435 1.557832 TCCACCCCTCTTATTTCCACG 59.442 52.381 0.00 0.00 0.00 4.94
435 436 1.408266 CCACCCCTCTTATTTCCACGG 60.408 57.143 0.00 0.00 0.00 4.94
436 437 0.255033 ACCCCTCTTATTTCCACGGC 59.745 55.000 0.00 0.00 0.00 5.68
437 438 0.465642 CCCCTCTTATTTCCACGGCC 60.466 60.000 0.00 0.00 0.00 6.13
438 439 0.465642 CCCTCTTATTTCCACGGCCC 60.466 60.000 0.00 0.00 0.00 5.80
439 440 0.546598 CCTCTTATTTCCACGGCCCT 59.453 55.000 0.00 0.00 0.00 5.19
440 441 1.064685 CCTCTTATTTCCACGGCCCTT 60.065 52.381 0.00 0.00 0.00 3.95
441 442 2.289565 CTCTTATTTCCACGGCCCTTC 58.710 52.381 0.00 0.00 0.00 3.46
442 443 1.631388 TCTTATTTCCACGGCCCTTCA 59.369 47.619 0.00 0.00 0.00 3.02
443 444 2.241176 TCTTATTTCCACGGCCCTTCAT 59.759 45.455 0.00 0.00 0.00 2.57
444 445 2.051334 TATTTCCACGGCCCTTCATG 57.949 50.000 0.00 0.00 0.00 3.07
445 446 0.039618 ATTTCCACGGCCCTTCATGT 59.960 50.000 0.00 0.00 0.00 3.21
446 447 0.893270 TTTCCACGGCCCTTCATGTG 60.893 55.000 0.00 0.00 0.00 3.21
447 448 3.443045 CCACGGCCCTTCATGTGC 61.443 66.667 0.00 0.00 0.00 4.57
448 449 2.360350 CACGGCCCTTCATGTGCT 60.360 61.111 0.00 0.00 0.00 4.40
449 450 2.045926 ACGGCCCTTCATGTGCTC 60.046 61.111 0.00 0.00 0.00 4.26
450 451 2.270205 CGGCCCTTCATGTGCTCT 59.730 61.111 0.00 0.00 0.00 4.09
451 452 1.377725 CGGCCCTTCATGTGCTCTT 60.378 57.895 0.00 0.00 0.00 2.85
452 453 1.372087 CGGCCCTTCATGTGCTCTTC 61.372 60.000 0.00 0.00 0.00 2.87
453 454 0.322816 GGCCCTTCATGTGCTCTTCA 60.323 55.000 0.00 0.00 0.00 3.02
454 455 1.684248 GGCCCTTCATGTGCTCTTCAT 60.684 52.381 0.00 0.00 0.00 2.57
455 456 1.404391 GCCCTTCATGTGCTCTTCATG 59.596 52.381 0.00 0.00 42.53 3.07
456 457 2.719739 CCCTTCATGTGCTCTTCATGT 58.280 47.619 5.94 0.00 42.03 3.21
457 458 2.422479 CCCTTCATGTGCTCTTCATGTG 59.578 50.000 5.94 0.00 42.03 3.21
458 459 2.159421 CCTTCATGTGCTCTTCATGTGC 60.159 50.000 5.94 0.00 42.03 4.57
459 460 1.456296 TCATGTGCTCTTCATGTGCC 58.544 50.000 5.94 0.00 42.03 5.01
460 461 0.098200 CATGTGCTCTTCATGTGCCG 59.902 55.000 0.00 0.00 38.17 5.69
461 462 1.028330 ATGTGCTCTTCATGTGCCGG 61.028 55.000 0.00 0.00 34.56 6.13
462 463 2.747460 TGCTCTTCATGTGCCGGC 60.747 61.111 22.73 22.73 34.56 6.13
463 464 2.437359 GCTCTTCATGTGCCGGCT 60.437 61.111 29.70 3.84 0.00 5.52
464 465 2.042831 GCTCTTCATGTGCCGGCTT 61.043 57.895 29.70 9.86 0.00 4.35
465 466 1.798735 CTCTTCATGTGCCGGCTTG 59.201 57.895 29.70 21.51 0.00 4.01
466 467 0.957395 CTCTTCATGTGCCGGCTTGT 60.957 55.000 29.70 10.29 0.00 3.16
467 468 1.210931 CTTCATGTGCCGGCTTGTG 59.789 57.895 29.70 21.72 0.00 3.33
468 469 1.228094 TTCATGTGCCGGCTTGTGA 60.228 52.632 29.70 23.59 0.00 3.58
469 470 0.608856 TTCATGTGCCGGCTTGTGAT 60.609 50.000 29.70 9.14 0.00 3.06
470 471 1.138036 CATGTGCCGGCTTGTGATG 59.862 57.895 29.70 17.06 0.00 3.07
471 472 1.303561 ATGTGCCGGCTTGTGATGT 60.304 52.632 29.70 1.80 0.00 3.06
472 473 0.895100 ATGTGCCGGCTTGTGATGTT 60.895 50.000 29.70 0.00 0.00 2.71
473 474 1.106351 TGTGCCGGCTTGTGATGTTT 61.106 50.000 29.70 0.00 0.00 2.83
474 475 0.031994 GTGCCGGCTTGTGATGTTTT 59.968 50.000 29.70 0.00 0.00 2.43
475 476 1.268352 GTGCCGGCTTGTGATGTTTTA 59.732 47.619 29.70 0.00 0.00 1.52
476 477 1.957177 TGCCGGCTTGTGATGTTTTAA 59.043 42.857 29.70 0.00 0.00 1.52
477 478 2.287909 TGCCGGCTTGTGATGTTTTAAC 60.288 45.455 29.70 0.00 0.00 2.01
478 479 2.924880 GCCGGCTTGTGATGTTTTAACC 60.925 50.000 22.15 0.00 0.00 2.85
479 480 2.580589 CGGCTTGTGATGTTTTAACCG 58.419 47.619 0.00 0.00 0.00 4.44
480 481 2.031508 CGGCTTGTGATGTTTTAACCGT 60.032 45.455 0.00 0.00 33.64 4.83
481 482 3.305110 GGCTTGTGATGTTTTAACCGTG 58.695 45.455 0.00 0.00 0.00 4.94
482 483 3.243267 GGCTTGTGATGTTTTAACCGTGT 60.243 43.478 0.00 0.00 0.00 4.49
483 484 4.023878 GGCTTGTGATGTTTTAACCGTGTA 60.024 41.667 0.00 0.00 0.00 2.90
484 485 4.907582 GCTTGTGATGTTTTAACCGTGTAC 59.092 41.667 0.00 0.00 0.00 2.90
485 486 5.421212 TTGTGATGTTTTAACCGTGTACC 57.579 39.130 0.00 0.00 0.00 3.34
486 487 4.449131 TGTGATGTTTTAACCGTGTACCA 58.551 39.130 0.00 0.00 0.00 3.25
487 488 4.272991 TGTGATGTTTTAACCGTGTACCAC 59.727 41.667 0.00 0.00 0.00 4.16
488 489 4.512571 GTGATGTTTTAACCGTGTACCACT 59.487 41.667 0.00 0.00 31.34 4.00
489 490 5.007921 GTGATGTTTTAACCGTGTACCACTT 59.992 40.000 0.00 0.00 31.34 3.16
490 491 5.236911 TGATGTTTTAACCGTGTACCACTTC 59.763 40.000 0.00 0.00 31.34 3.01
491 492 3.876320 TGTTTTAACCGTGTACCACTTCC 59.124 43.478 0.00 0.00 31.34 3.46
492 493 3.834489 TTTAACCGTGTACCACTTCCA 57.166 42.857 0.00 0.00 31.34 3.53
493 494 2.818130 TAACCGTGTACCACTTCCAC 57.182 50.000 0.00 0.00 31.34 4.02
494 495 0.107268 AACCGTGTACCACTTCCACC 59.893 55.000 0.00 0.00 31.34 4.61
495 496 1.373748 CCGTGTACCACTTCCACCG 60.374 63.158 0.00 0.00 31.34 4.94
496 497 1.364901 CGTGTACCACTTCCACCGT 59.635 57.895 0.00 0.00 31.34 4.83
497 498 0.665369 CGTGTACCACTTCCACCGTC 60.665 60.000 0.00 0.00 31.34 4.79
498 499 0.390124 GTGTACCACTTCCACCGTCA 59.610 55.000 0.00 0.00 0.00 4.35
499 500 0.677288 TGTACCACTTCCACCGTCAG 59.323 55.000 0.00 0.00 0.00 3.51
500 501 0.669625 GTACCACTTCCACCGTCAGC 60.670 60.000 0.00 0.00 0.00 4.26
501 502 0.830444 TACCACTTCCACCGTCAGCT 60.830 55.000 0.00 0.00 0.00 4.24
502 503 1.071471 CCACTTCCACCGTCAGCTT 59.929 57.895 0.00 0.00 0.00 3.74
503 504 1.230635 CCACTTCCACCGTCAGCTTG 61.231 60.000 0.00 0.00 0.00 4.01
504 505 0.249868 CACTTCCACCGTCAGCTTGA 60.250 55.000 0.00 0.00 0.00 3.02
505 506 0.687354 ACTTCCACCGTCAGCTTGAT 59.313 50.000 0.00 0.00 0.00 2.57
506 507 1.072331 ACTTCCACCGTCAGCTTGATT 59.928 47.619 0.00 0.00 0.00 2.57
507 508 1.466167 CTTCCACCGTCAGCTTGATTG 59.534 52.381 0.00 0.00 0.00 2.67
508 509 0.955428 TCCACCGTCAGCTTGATTGC 60.955 55.000 0.00 0.00 0.00 3.56
509 510 1.236616 CCACCGTCAGCTTGATTGCA 61.237 55.000 0.00 0.00 34.99 4.08
510 511 0.806868 CACCGTCAGCTTGATTGCAT 59.193 50.000 0.00 0.00 34.99 3.96
511 512 2.009051 CACCGTCAGCTTGATTGCATA 58.991 47.619 0.00 0.00 34.99 3.14
512 513 2.031314 CACCGTCAGCTTGATTGCATAG 59.969 50.000 0.00 0.00 34.99 2.23
513 514 1.600957 CCGTCAGCTTGATTGCATAGG 59.399 52.381 0.00 0.00 34.99 2.57
514 515 2.554142 CGTCAGCTTGATTGCATAGGA 58.446 47.619 0.00 0.00 34.99 2.94
515 516 2.543012 CGTCAGCTTGATTGCATAGGAG 59.457 50.000 0.00 0.00 34.99 3.69
516 517 3.539604 GTCAGCTTGATTGCATAGGAGT 58.460 45.455 0.00 0.00 34.99 3.85
517 518 4.697514 GTCAGCTTGATTGCATAGGAGTA 58.302 43.478 0.00 0.00 34.99 2.59
518 519 4.749099 GTCAGCTTGATTGCATAGGAGTAG 59.251 45.833 0.00 0.00 34.99 2.57
519 520 4.406972 TCAGCTTGATTGCATAGGAGTAGT 59.593 41.667 0.00 0.00 34.99 2.73
520 521 5.598417 TCAGCTTGATTGCATAGGAGTAGTA 59.402 40.000 0.00 0.00 34.99 1.82
521 522 5.694006 CAGCTTGATTGCATAGGAGTAGTAC 59.306 44.000 0.00 0.00 34.99 2.73
522 523 5.600484 AGCTTGATTGCATAGGAGTAGTACT 59.400 40.000 1.37 1.37 34.99 2.73
523 524 5.923684 GCTTGATTGCATAGGAGTAGTACTC 59.076 44.000 20.24 20.24 44.32 2.59
531 532 2.718094 GAGTAGTACTCCCTCCGCC 58.282 63.158 18.10 0.00 39.28 6.13
532 533 0.822944 GAGTAGTACTCCCTCCGCCC 60.823 65.000 18.10 0.00 39.28 6.13
533 534 2.192187 GTAGTACTCCCTCCGCCCG 61.192 68.421 0.00 0.00 0.00 6.13
534 535 3.426309 TAGTACTCCCTCCGCCCGG 62.426 68.421 0.00 0.00 0.00 5.73
535 536 4.828296 GTACTCCCTCCGCCCGGA 62.828 72.222 0.73 9.31 42.90 5.14
536 537 4.828296 TACTCCCTCCGCCCGGAC 62.828 72.222 0.73 0.00 39.76 4.79
556 557 2.561858 ACGGAGGGAGTAGTTGAGAAAC 59.438 50.000 0.00 0.00 0.00 2.78
578 579 1.009108 CACACATTTTCCGTGCGCA 60.009 52.632 5.66 5.66 37.93 6.09
579 580 1.008995 ACACATTTTCCGTGCGCAC 60.009 52.632 30.42 30.42 37.93 5.34
581 582 2.501650 CATTTTCCGTGCGCACCG 60.502 61.111 33.23 26.86 0.00 4.94
600 601 2.847234 AGGTCCGCACCAACCAGA 60.847 61.111 0.00 0.00 46.68 3.86
606 607 2.431683 GCACCAACCAGAGGCAGA 59.568 61.111 0.00 0.00 0.00 4.26
607 608 1.001641 GCACCAACCAGAGGCAGAT 60.002 57.895 0.00 0.00 0.00 2.90
608 609 1.028868 GCACCAACCAGAGGCAGATC 61.029 60.000 0.00 0.00 0.00 2.75
609 610 0.393537 CACCAACCAGAGGCAGATCC 60.394 60.000 0.00 0.00 0.00 3.36
662 670 4.039357 ACCGACGGTGCTCACTCG 62.039 66.667 21.02 2.82 32.98 4.18
669 677 3.418068 GTGCTCACTCGCTGCCAC 61.418 66.667 0.00 0.00 0.00 5.01
672 680 3.699894 CTCACTCGCTGCCACCCT 61.700 66.667 0.00 0.00 0.00 4.34
705 722 1.842381 CTTTCTTCCACCTCCCGCCT 61.842 60.000 0.00 0.00 0.00 5.52
725 742 1.303317 GCTGGCCGGGAGAGAAAAA 60.303 57.895 15.02 0.00 0.00 1.94
727 744 1.408266 GCTGGCCGGGAGAGAAAAATA 60.408 52.381 15.02 0.00 0.00 1.40
728 745 2.749800 GCTGGCCGGGAGAGAAAAATAT 60.750 50.000 15.02 0.00 0.00 1.28
730 747 3.954258 CTGGCCGGGAGAGAAAAATATTT 59.046 43.478 2.57 0.00 0.00 1.40
734 751 5.106673 GGCCGGGAGAGAAAAATATTTATCG 60.107 44.000 2.18 0.00 40.76 2.92
735 752 5.469084 GCCGGGAGAGAAAAATATTTATCGT 59.531 40.000 2.18 0.00 40.76 3.73
736 753 6.347483 GCCGGGAGAGAAAAATATTTATCGTC 60.347 42.308 2.18 0.00 40.76 4.20
737 754 6.704493 CCGGGAGAGAAAAATATTTATCGTCA 59.296 38.462 0.01 0.00 40.76 4.35
738 755 7.095607 CCGGGAGAGAAAAATATTTATCGTCAG 60.096 40.741 0.01 0.93 40.76 3.51
739 756 7.095607 CGGGAGAGAAAAATATTTATCGTCAGG 60.096 40.741 0.01 0.00 40.76 3.86
740 757 7.931948 GGGAGAGAAAAATATTTATCGTCAGGA 59.068 37.037 0.01 0.00 40.76 3.86
741 758 9.495572 GGAGAGAAAAATATTTATCGTCAGGAT 57.504 33.333 0.01 0.00 40.76 3.24
745 762 9.220767 AGAAAAATATTTATCGTCAGGATAGCC 57.779 33.333 0.01 0.00 38.79 3.93
749 766 8.918202 AATATTTATCGTCAGGATAGCCAAAA 57.082 30.769 0.00 0.00 38.79 2.44
750 767 6.619801 ATTTATCGTCAGGATAGCCAAAAC 57.380 37.500 0.00 0.00 38.79 2.43
765 783 0.037605 AAAACGAACGCGGAGATCCT 60.038 50.000 12.47 0.00 43.17 3.24
767 785 0.736325 AACGAACGCGGAGATCCTTG 60.736 55.000 12.47 0.00 43.17 3.61
770 788 2.579684 GAACGCGGAGATCCTTGGCT 62.580 60.000 12.47 0.00 0.00 4.75
791 809 5.634896 GCTAATGGCCGATTAATCAATCAG 58.365 41.667 15.57 4.22 40.61 2.90
792 810 5.182001 GCTAATGGCCGATTAATCAATCAGT 59.818 40.000 15.57 10.55 40.61 3.41
794 812 4.149511 TGGCCGATTAATCAATCAGTCA 57.850 40.909 15.57 3.47 40.61 3.41
795 813 4.129380 TGGCCGATTAATCAATCAGTCAG 58.871 43.478 15.57 0.00 40.61 3.51
797 815 4.212214 GGCCGATTAATCAATCAGTCAGTC 59.788 45.833 15.57 0.00 40.61 3.51
798 816 4.084849 GCCGATTAATCAATCAGTCAGTCG 60.085 45.833 15.57 0.00 40.61 4.18
799 817 4.084849 CCGATTAATCAATCAGTCAGTCGC 60.085 45.833 15.57 0.00 40.61 5.19
800 818 4.084849 CGATTAATCAATCAGTCAGTCGCC 60.085 45.833 15.57 0.00 40.61 5.54
818 836 2.480555 CATGGAAACCGACAGCGC 59.519 61.111 0.00 0.00 35.83 5.92
824 842 2.711185 GAAACCGACAGCGCAACCAC 62.711 60.000 11.47 0.00 35.83 4.16
826 844 4.988598 CCGACAGCGCAACCACCT 62.989 66.667 11.47 0.00 35.83 4.00
831 849 3.872603 AGCGCAACCACCTCACCA 61.873 61.111 11.47 0.00 0.00 4.17
832 850 2.672996 GCGCAACCACCTCACCAT 60.673 61.111 0.30 0.00 0.00 3.55
836 854 1.966762 CAACCACCTCACCATTGGC 59.033 57.895 1.54 0.00 33.25 4.52
840 858 1.075482 CACCTCACCATTGGCCTGT 59.925 57.895 3.32 0.00 0.00 4.00
841 859 0.962356 CACCTCACCATTGGCCTGTC 60.962 60.000 3.32 0.00 0.00 3.51
842 860 1.379044 CCTCACCATTGGCCTGTCC 60.379 63.158 3.32 0.00 0.00 4.02
843 861 1.687612 CTCACCATTGGCCTGTCCT 59.312 57.895 3.32 0.00 35.26 3.85
844 862 0.038744 CTCACCATTGGCCTGTCCTT 59.961 55.000 3.32 0.00 35.26 3.36
845 863 0.482446 TCACCATTGGCCTGTCCTTT 59.518 50.000 3.32 0.00 35.26 3.11
846 864 1.133199 TCACCATTGGCCTGTCCTTTT 60.133 47.619 3.32 0.00 35.26 2.27
854 886 1.299976 CCTGTCCTTTTCCCTCCCG 59.700 63.158 0.00 0.00 0.00 5.14
881 913 1.221021 CCCCCTCCGTTAGTTGAGC 59.779 63.158 0.00 0.00 0.00 4.26
882 914 1.153628 CCCCTCCGTTAGTTGAGCG 60.154 63.158 0.00 0.00 0.00 5.03
883 915 1.153628 CCCTCCGTTAGTTGAGCGG 60.154 63.158 0.00 0.00 46.12 5.52
965 1034 3.394836 GAACCCCGCTCCAGCTCT 61.395 66.667 0.00 0.00 39.32 4.09
968 1037 4.154347 CCCCGCTCCAGCTCTGTC 62.154 72.222 0.00 0.00 39.32 3.51
977 1046 4.406173 AGCTCTGTCGTCGGTGCG 62.406 66.667 9.32 0.00 42.21 5.34
1057 1132 3.753797 GCGGATCTTTTTCAAGAACCTCT 59.246 43.478 8.98 0.00 45.69 3.69
1067 1142 5.695851 TTCAAGAACCTCTCTTTGCATTC 57.304 39.130 0.00 0.00 41.97 2.67
1069 1144 2.704572 AGAACCTCTCTTTGCATTCCG 58.295 47.619 0.00 0.00 0.00 4.30
1103 1200 1.493134 GGTTTGACCGCGTCTCGTTT 61.493 55.000 4.92 0.00 36.19 3.60
1104 1201 0.382636 GTTTGACCGCGTCTCGTTTG 60.383 55.000 4.92 0.00 36.19 2.93
1106 1203 0.806884 TTGACCGCGTCTCGTTTGTT 60.807 50.000 4.92 0.00 36.19 2.83
1107 1204 1.200839 GACCGCGTCTCGTTTGTTG 59.799 57.895 4.92 0.00 36.19 3.33
1108 1205 1.485032 GACCGCGTCTCGTTTGTTGT 61.485 55.000 4.92 0.00 36.19 3.32
1109 1206 1.200839 CCGCGTCTCGTTTGTTGTC 59.799 57.895 4.92 0.00 36.19 3.18
1312 1411 0.602905 ACAAGCGCCACAGAGGTAAC 60.603 55.000 2.29 0.00 40.61 2.50
1313 1412 1.374252 AAGCGCCACAGAGGTAACG 60.374 57.895 2.29 0.00 46.39 3.18
1314 1413 3.488090 GCGCCACAGAGGTAACGC 61.488 66.667 0.00 0.00 41.31 4.84
1316 1415 2.436115 GCCACAGAGGTAACGCCC 60.436 66.667 0.00 0.00 46.39 6.13
1317 1416 2.125673 CCACAGAGGTAACGCCCG 60.126 66.667 0.00 0.00 46.39 6.13
1318 1417 2.813908 CACAGAGGTAACGCCCGC 60.814 66.667 0.00 0.00 46.39 6.13
1319 1418 4.078516 ACAGAGGTAACGCCCGCC 62.079 66.667 0.00 0.00 46.39 6.13
1320 1419 4.077184 CAGAGGTAACGCCCGCCA 62.077 66.667 0.00 0.00 46.39 5.69
1322 1421 2.588034 GAGGTAACGCCCGCCATC 60.588 66.667 0.00 0.00 46.39 3.51
1323 1422 4.171103 AGGTAACGCCCGCCATCC 62.171 66.667 0.00 0.00 46.39 3.51
1324 1423 4.476752 GGTAACGCCCGCCATCCA 62.477 66.667 0.00 0.00 0.00 3.41
1325 1424 2.437002 GTAACGCCCGCCATCCAA 60.437 61.111 0.00 0.00 0.00 3.53
1326 1425 1.822186 GTAACGCCCGCCATCCAAT 60.822 57.895 0.00 0.00 0.00 3.16
1353 1467 1.070134 CGGACGGATCTCTCTCTCTCT 59.930 57.143 0.00 0.00 0.00 3.10
1404 1519 4.543084 GCCGCCTGCAATTCGAGC 62.543 66.667 3.84 0.00 40.77 5.03
1437 1552 1.066716 AGCGCACCCGACAAGTTTATA 60.067 47.619 11.47 0.00 36.29 0.98
1442 1557 4.676196 CGCACCCGACAAGTTTATACTAGT 60.676 45.833 0.00 0.00 36.29 2.57
1446 1561 6.976925 CACCCGACAAGTTTATACTAGTTAGG 59.023 42.308 0.00 0.00 33.17 2.69
1484 1605 3.366052 TCCCCTTTTGTAGATCTTGCC 57.634 47.619 0.00 0.00 0.00 4.52
1488 1612 3.191371 CCCTTTTGTAGATCTTGCCACAC 59.809 47.826 0.00 0.00 0.00 3.82
1510 1634 4.106197 CCATTCTTGTCGTGAGCTAGTAC 58.894 47.826 0.00 0.00 0.00 2.73
1512 1636 5.066117 CCATTCTTGTCGTGAGCTAGTACTA 59.934 44.000 1.89 1.89 0.00 1.82
1566 1690 9.722056 CTTACACCATTCTTATAATTTGTCTGC 57.278 33.333 0.00 0.00 0.00 4.26
1584 1708 1.098050 GCCTGGGTGAATTGTAGCTG 58.902 55.000 0.00 0.00 0.00 4.24
1659 1783 6.917477 TGACTGCAATTTAGTGTTGAAACATC 59.083 34.615 0.00 0.00 41.59 3.06
1966 2090 3.809324 GCCAGGTTGGTGCTAAAGAGTTA 60.809 47.826 0.00 0.00 40.46 2.24
1968 2092 5.010282 CCAGGTTGGTGCTAAAGAGTTATT 58.990 41.667 0.00 0.00 31.35 1.40
1995 2121 8.583810 TTAATAGGTTTTGACGAGAATATCCG 57.416 34.615 0.00 0.00 0.00 4.18
1998 2124 3.937079 GGTTTTGACGAGAATATCCGGTT 59.063 43.478 0.00 0.00 0.00 4.44
2072 2198 1.474143 GGAGAAATCCCTGGAGCTTCG 60.474 57.143 0.00 0.00 0.00 3.79
2084 2210 1.216122 GAGCTTCGCCTGATCATCAC 58.784 55.000 0.00 0.00 0.00 3.06
2196 2325 4.370917 GTGTTCCATTTTGCAACACTCAT 58.629 39.130 0.00 0.00 44.32 2.90
2263 2428 1.196012 ATCCGTCAAGGGAGTTCTCC 58.804 55.000 10.13 10.13 40.02 3.71
2441 2606 3.006967 AGACGCTTTACTGTGAGTTCCAT 59.993 43.478 0.00 0.00 0.00 3.41
2471 2636 8.206867 CCTCCTCTTCACATTCATATCTTACAA 58.793 37.037 0.00 0.00 0.00 2.41
2495 2660 2.351157 GCATCTGCTGTTTGTCAGTTCC 60.351 50.000 0.00 0.00 45.23 3.62
2510 2675 3.569701 TCAGTTCCAAACCTGATTGAAGC 59.430 43.478 0.00 0.00 31.84 3.86
2513 2678 5.416952 CAGTTCCAAACCTGATTGAAGCTAT 59.583 40.000 0.00 0.00 31.84 2.97
2525 2690 7.418368 CCTGATTGAAGCTATGAGTTAGGAGAA 60.418 40.741 0.00 0.00 0.00 2.87
2699 2901 2.529632 AGAAAAGTCCCCATTGCTTCC 58.470 47.619 0.00 0.00 0.00 3.46
2940 3146 6.459923 AGGTGATCTTCTTAACAGTTCTGTC 58.540 40.000 5.91 0.00 0.00 3.51
2953 3159 4.141711 ACAGTTCTGTCCTTAGTTGAAGCA 60.142 41.667 0.00 0.00 33.36 3.91
3272 3480 0.329596 ACATTGAACCCAGAGCTCCC 59.670 55.000 10.93 0.00 0.00 4.30
3795 4025 1.291877 CTCGTGAAAAGCGTCCTGGG 61.292 60.000 0.00 0.00 0.00 4.45
4163 4398 4.380973 CGCAGTTCTCTCCTGAATTCACTA 60.381 45.833 3.38 0.00 31.38 2.74
4584 4819 7.765695 TCTTTATTTTCTTGCATCTTCCACT 57.234 32.000 0.00 0.00 0.00 4.00
4606 4841 5.418840 ACTGCCCAATTCCTTATACTGTTTG 59.581 40.000 0.00 0.00 0.00 2.93
4613 4848 7.201821 CCAATTCCTTATACTGTTTGGTCATCC 60.202 40.741 0.00 0.00 0.00 3.51
5044 5810 8.855110 TGCTCTGGAGAAACAAAAATATGTTAA 58.145 29.630 1.35 0.00 42.49 2.01
5123 5889 4.641541 TGCAAATGATATGTCTCAGTTGGG 59.358 41.667 13.87 0.00 46.13 4.12
5928 6694 7.035004 CGACCATTTTGATCATTAACATGGTT 58.965 34.615 12.88 0.03 39.67 3.67
5943 6709 2.331451 GTTGGTGTCGTTGCTGGC 59.669 61.111 0.00 0.00 0.00 4.85
6244 7010 7.041721 ACAGAAAATATAACAGTGATCGAGCA 58.958 34.615 0.00 0.00 0.00 4.26
6247 7013 7.549134 AGAAAATATAACAGTGATCGAGCAACA 59.451 33.333 4.22 0.00 0.00 3.33
6251 7017 0.798776 CAGTGATCGAGCAACAACCC 59.201 55.000 4.22 0.00 0.00 4.11
6253 7019 2.032634 TGATCGAGCAACAACCCGC 61.033 57.895 0.00 0.00 0.00 6.13
6465 7235 6.159575 TGGATTGTAGGAATGGACCTATGAAA 59.840 38.462 0.00 0.00 43.25 2.69
6467 7237 7.175641 GGATTGTAGGAATGGACCTATGAAATG 59.824 40.741 0.00 0.00 43.25 2.32
6530 7301 9.369904 CACATTTTGGAGGAGTTTTAAATATGG 57.630 33.333 0.00 0.00 0.00 2.74
6535 7306 5.254267 TGGAGGAGTTTTAAATATGGGGTCA 59.746 40.000 0.00 0.00 0.00 4.02
6587 7358 4.893524 TCCAAGAGTTTTTCTTTCCCTTCC 59.106 41.667 0.00 0.00 43.68 3.46
6640 7411 5.236047 GCAAAATTGTTGTAGTGCATCCAAA 59.764 36.000 0.00 0.00 32.29 3.28
6643 7414 4.566545 TTGTTGTAGTGCATCCAAACAG 57.433 40.909 0.00 0.00 0.00 3.16
6661 7433 3.030291 ACAGCAACTTTGTGGAATTCCA 58.970 40.909 23.63 23.63 45.30 3.53
6700 7480 2.549754 AGAAATCGGCAACACAAGACAG 59.450 45.455 0.00 0.00 0.00 3.51
6740 7520 9.729281 TTCTTTTACCTATTCCTATGTTTTCGT 57.271 29.630 0.00 0.00 0.00 3.85
6955 7736 5.895636 TTGACCAACAATTACTATGCCAG 57.104 39.130 0.00 0.00 33.18 4.85
6974 7755 7.320443 TGCCAGAGTATTTATAGCACAAAAG 57.680 36.000 0.00 0.00 0.00 2.27
7017 7798 5.074584 AGTTACAGCTTGGCTCTACTTAC 57.925 43.478 0.00 0.00 36.40 2.34
7018 7799 4.527038 AGTTACAGCTTGGCTCTACTTACA 59.473 41.667 0.00 0.00 36.40 2.41
7132 7913 3.399330 AGTTGTAGATGTCACCCAAACG 58.601 45.455 0.00 0.00 0.00 3.60
7147 7928 6.203338 TCACCCAAACGTTTCTAAAGTATGTC 59.797 38.462 11.37 0.00 0.00 3.06
7148 7929 5.178067 ACCCAAACGTTTCTAAAGTATGTCG 59.822 40.000 11.37 0.00 0.00 4.35
7149 7930 5.178067 CCCAAACGTTTCTAAAGTATGTCGT 59.822 40.000 11.37 0.00 0.00 4.34
7150 7931 6.293027 CCCAAACGTTTCTAAAGTATGTCGTT 60.293 38.462 11.37 0.00 40.92 3.85
7151 7932 7.127686 CCAAACGTTTCTAAAGTATGTCGTTT 58.872 34.615 11.37 0.00 46.04 3.60
7152 7933 7.319615 CCAAACGTTTCTAAAGTATGTCGTTTC 59.680 37.037 11.37 0.00 44.33 2.78
7153 7934 7.704789 AACGTTTCTAAAGTATGTCGTTTCT 57.295 32.000 0.00 0.00 37.04 2.52
7154 7935 8.801715 AACGTTTCTAAAGTATGTCGTTTCTA 57.198 30.769 0.00 0.00 37.04 2.10
7155 7936 8.801715 ACGTTTCTAAAGTATGTCGTTTCTAA 57.198 30.769 0.00 0.00 0.00 2.10
7156 7937 9.248291 ACGTTTCTAAAGTATGTCGTTTCTAAA 57.752 29.630 0.00 0.00 0.00 1.85
7157 7938 9.723299 CGTTTCTAAAGTATGTCGTTTCTAAAG 57.277 33.333 0.00 0.00 0.00 1.85
7165 7946 9.924650 AAGTATGTCGTTTCTAAAGTATGTTCT 57.075 29.630 0.00 0.00 0.00 3.01
7166 7947 9.924650 AGTATGTCGTTTCTAAAGTATGTTCTT 57.075 29.630 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.339814 ACGACATGTGTTACCCAAAAACAT 59.660 37.500 1.15 0.00 38.95 2.71
2 3 3.695060 ACGACATGTGTTACCCAAAAACA 59.305 39.130 1.15 0.00 34.56 2.83
3 4 4.039032 CACGACATGTGTTACCCAAAAAC 58.961 43.478 1.15 0.00 43.88 2.43
4 5 4.294416 CACGACATGTGTTACCCAAAAA 57.706 40.909 1.15 0.00 43.88 1.94
5 6 3.972950 CACGACATGTGTTACCCAAAA 57.027 42.857 1.15 0.00 43.88 2.44
25 26 7.570140 CACATATGATTGTGCCTCGATAGAAAC 60.570 40.741 10.38 0.00 42.14 2.78
26 27 6.424812 CACATATGATTGTGCCTCGATAGAAA 59.575 38.462 10.38 0.00 42.14 2.52
27 28 5.928264 CACATATGATTGTGCCTCGATAGAA 59.072 40.000 10.38 0.00 42.14 2.10
28 29 5.243730 TCACATATGATTGTGCCTCGATAGA 59.756 40.000 10.38 0.00 45.29 1.98
29 30 5.473039 TCACATATGATTGTGCCTCGATAG 58.527 41.667 10.38 0.00 45.29 2.08
30 31 5.467035 TCACATATGATTGTGCCTCGATA 57.533 39.130 10.38 0.00 45.29 2.92
31 32 4.341366 TCACATATGATTGTGCCTCGAT 57.659 40.909 10.38 0.00 45.29 3.59
32 33 3.817709 TCACATATGATTGTGCCTCGA 57.182 42.857 10.38 0.00 45.29 4.04
33 34 4.060205 TCATCACATATGATTGTGCCTCG 58.940 43.478 10.38 0.00 43.40 4.63
34 35 5.061853 AGTCATCACATATGATTGTGCCTC 58.938 41.667 10.38 0.00 43.40 4.70
35 36 5.045012 AGTCATCACATATGATTGTGCCT 57.955 39.130 10.38 0.00 43.40 4.75
36 37 5.297527 TGAAGTCATCACATATGATTGTGCC 59.702 40.000 10.38 0.00 43.40 5.01
37 38 6.367686 TGAAGTCATCACATATGATTGTGC 57.632 37.500 10.38 2.68 43.40 4.57
38 39 6.427974 GCTGAAGTCATCACATATGATTGTG 58.572 40.000 10.38 0.00 43.40 3.33
39 40 5.235831 CGCTGAAGTCATCACATATGATTGT 59.764 40.000 10.38 0.00 43.40 2.71
40 41 5.464389 TCGCTGAAGTCATCACATATGATTG 59.536 40.000 10.38 4.01 43.40 2.67
41 42 5.604565 TCGCTGAAGTCATCACATATGATT 58.395 37.500 10.38 0.00 43.40 2.57
43 44 4.654091 TCGCTGAAGTCATCACATATGA 57.346 40.909 10.38 0.00 39.83 2.15
44 45 5.228665 AGATCGCTGAAGTCATCACATATG 58.771 41.667 0.00 0.00 33.47 1.78
45 46 5.465532 AGATCGCTGAAGTCATCACATAT 57.534 39.130 0.00 0.00 33.47 1.78
46 47 4.926140 AGATCGCTGAAGTCATCACATA 57.074 40.909 0.00 0.00 33.47 2.29
47 48 3.815856 AGATCGCTGAAGTCATCACAT 57.184 42.857 0.00 0.00 33.47 3.21
48 49 3.256558 CAAGATCGCTGAAGTCATCACA 58.743 45.455 0.00 0.00 33.47 3.58
49 50 2.606725 CCAAGATCGCTGAAGTCATCAC 59.393 50.000 0.00 0.00 33.47 3.06
50 51 2.419159 CCCAAGATCGCTGAAGTCATCA 60.419 50.000 0.00 0.00 36.38 3.07
51 52 2.208431 CCCAAGATCGCTGAAGTCATC 58.792 52.381 0.00 0.00 0.00 2.92
52 53 1.556911 ACCCAAGATCGCTGAAGTCAT 59.443 47.619 0.00 0.00 0.00 3.06
53 54 0.976641 ACCCAAGATCGCTGAAGTCA 59.023 50.000 0.00 0.00 0.00 3.41
54 55 2.427453 TCTACCCAAGATCGCTGAAGTC 59.573 50.000 0.00 0.00 0.00 3.01
55 56 2.457598 TCTACCCAAGATCGCTGAAGT 58.542 47.619 0.00 0.73 0.00 3.01
56 57 3.388308 CATCTACCCAAGATCGCTGAAG 58.612 50.000 0.00 0.00 43.42 3.02
57 58 2.483714 GCATCTACCCAAGATCGCTGAA 60.484 50.000 0.00 0.00 43.42 3.02
58 59 1.069204 GCATCTACCCAAGATCGCTGA 59.931 52.381 0.00 0.00 43.42 4.26
59 60 1.069823 AGCATCTACCCAAGATCGCTG 59.930 52.381 9.57 0.00 43.42 5.18
60 61 1.418334 AGCATCTACCCAAGATCGCT 58.582 50.000 0.00 6.29 43.42 4.93
61 62 2.678324 GTAGCATCTACCCAAGATCGC 58.322 52.381 0.00 0.00 43.42 4.58
62 63 2.351835 CCGTAGCATCTACCCAAGATCG 60.352 54.545 0.00 0.00 43.42 3.69
63 64 2.028930 CCCGTAGCATCTACCCAAGATC 60.029 54.545 0.00 0.00 43.42 2.75
64 65 1.971357 CCCGTAGCATCTACCCAAGAT 59.029 52.381 0.00 0.00 46.36 2.40
65 66 1.063492 TCCCGTAGCATCTACCCAAGA 60.063 52.381 0.00 0.00 39.02 3.02
66 67 1.341531 CTCCCGTAGCATCTACCCAAG 59.658 57.143 0.00 0.00 0.00 3.61
67 68 1.342674 ACTCCCGTAGCATCTACCCAA 60.343 52.381 0.00 0.00 0.00 4.12
68 69 0.260816 ACTCCCGTAGCATCTACCCA 59.739 55.000 0.00 0.00 0.00 4.51
69 70 1.068741 CAACTCCCGTAGCATCTACCC 59.931 57.143 0.00 0.00 0.00 3.69
70 71 1.755380 ACAACTCCCGTAGCATCTACC 59.245 52.381 0.00 0.00 0.00 3.18
71 72 2.165845 ACACAACTCCCGTAGCATCTAC 59.834 50.000 0.00 0.00 0.00 2.59
72 73 2.165641 CACACAACTCCCGTAGCATCTA 59.834 50.000 0.00 0.00 0.00 1.98
73 74 1.066858 CACACAACTCCCGTAGCATCT 60.067 52.381 0.00 0.00 0.00 2.90
74 75 1.359848 CACACAACTCCCGTAGCATC 58.640 55.000 0.00 0.00 0.00 3.91
75 76 0.673644 GCACACAACTCCCGTAGCAT 60.674 55.000 0.00 0.00 0.00 3.79
76 77 1.301401 GCACACAACTCCCGTAGCA 60.301 57.895 0.00 0.00 0.00 3.49
77 78 0.673644 ATGCACACAACTCCCGTAGC 60.674 55.000 0.00 0.00 0.00 3.58
78 79 1.078709 CATGCACACAACTCCCGTAG 58.921 55.000 0.00 0.00 0.00 3.51
79 80 0.394938 ACATGCACACAACTCCCGTA 59.605 50.000 0.00 0.00 0.00 4.02
80 81 1.148273 ACATGCACACAACTCCCGT 59.852 52.632 0.00 0.00 0.00 5.28
81 82 0.884259 TCACATGCACACAACTCCCG 60.884 55.000 0.00 0.00 0.00 5.14
82 83 1.200716 CATCACATGCACACAACTCCC 59.799 52.381 0.00 0.00 0.00 4.30
83 84 2.153645 TCATCACATGCACACAACTCC 58.846 47.619 0.00 0.00 0.00 3.85
84 85 3.189910 ACATCATCACATGCACACAACTC 59.810 43.478 0.00 0.00 0.00 3.01
85 86 3.057806 CACATCATCACATGCACACAACT 60.058 43.478 0.00 0.00 0.00 3.16
86 87 3.239254 CACATCATCACATGCACACAAC 58.761 45.455 0.00 0.00 0.00 3.32
87 88 2.351932 GCACATCATCACATGCACACAA 60.352 45.455 0.00 0.00 38.00 3.33
88 89 1.200484 GCACATCATCACATGCACACA 59.800 47.619 0.00 0.00 38.00 3.72
89 90 1.200484 TGCACATCATCACATGCACAC 59.800 47.619 0.00 0.00 42.92 3.82
90 91 1.535833 TGCACATCATCACATGCACA 58.464 45.000 0.00 0.00 42.92 4.57
92 93 2.094957 CAGTTGCACATCATCACATGCA 60.095 45.455 0.00 0.00 45.94 3.96
93 94 2.526077 CAGTTGCACATCATCACATGC 58.474 47.619 0.00 0.00 38.59 4.06
94 95 2.526077 GCAGTTGCACATCATCACATG 58.474 47.619 0.00 0.00 41.59 3.21
95 96 1.131693 CGCAGTTGCACATCATCACAT 59.868 47.619 4.84 0.00 42.21 3.21
96 97 0.518195 CGCAGTTGCACATCATCACA 59.482 50.000 4.84 0.00 42.21 3.58
97 98 0.795735 GCGCAGTTGCACATCATCAC 60.796 55.000 0.30 0.00 42.21 3.06
98 99 1.235948 TGCGCAGTTGCACATCATCA 61.236 50.000 5.66 0.00 40.62 3.07
99 100 1.503091 TGCGCAGTTGCACATCATC 59.497 52.632 5.66 0.00 40.62 2.92
100 101 3.670989 TGCGCAGTTGCACATCAT 58.329 50.000 5.66 0.00 40.62 2.45
113 114 9.882996 AATATGTAAATGTATATATGCATGCGC 57.117 29.630 15.92 0.00 33.33 6.09
126 127 9.373603 GGCCACGTCATATAATATGTAAATGTA 57.626 33.333 0.00 0.00 0.00 2.29
127 128 8.100791 AGGCCACGTCATATAATATGTAAATGT 58.899 33.333 5.01 0.00 0.00 2.71
128 129 8.492673 AGGCCACGTCATATAATATGTAAATG 57.507 34.615 5.01 0.00 0.00 2.32
129 130 9.595823 GTAGGCCACGTCATATAATATGTAAAT 57.404 33.333 5.01 0.00 0.00 1.40
130 131 8.586744 TGTAGGCCACGTCATATAATATGTAAA 58.413 33.333 5.01 0.00 0.00 2.01
131 132 8.124808 TGTAGGCCACGTCATATAATATGTAA 57.875 34.615 5.01 0.00 0.00 2.41
132 133 7.706100 TGTAGGCCACGTCATATAATATGTA 57.294 36.000 5.01 0.00 0.00 2.29
133 134 6.599356 TGTAGGCCACGTCATATAATATGT 57.401 37.500 5.01 0.00 0.00 2.29
134 135 7.064609 CCTTTGTAGGCCACGTCATATAATATG 59.935 40.741 5.01 0.00 33.99 1.78
135 136 7.103641 CCTTTGTAGGCCACGTCATATAATAT 58.896 38.462 5.01 0.00 33.99 1.28
136 137 6.460781 CCTTTGTAGGCCACGTCATATAATA 58.539 40.000 5.01 0.00 33.99 0.98
137 138 5.305585 CCTTTGTAGGCCACGTCATATAAT 58.694 41.667 5.01 0.00 33.99 1.28
138 139 4.443739 CCCTTTGTAGGCCACGTCATATAA 60.444 45.833 5.01 0.00 40.50 0.98
139 140 3.070446 CCCTTTGTAGGCCACGTCATATA 59.930 47.826 5.01 0.00 40.50 0.86
140 141 2.158813 CCCTTTGTAGGCCACGTCATAT 60.159 50.000 5.01 0.00 40.50 1.78
141 142 1.208535 CCCTTTGTAGGCCACGTCATA 59.791 52.381 5.01 0.00 40.50 2.15
142 143 0.035439 CCCTTTGTAGGCCACGTCAT 60.035 55.000 5.01 0.00 40.50 3.06
143 144 1.122632 TCCCTTTGTAGGCCACGTCA 61.123 55.000 5.01 0.00 40.50 4.35
144 145 0.035739 TTCCCTTTGTAGGCCACGTC 59.964 55.000 5.01 0.00 40.50 4.34
145 146 0.696501 ATTCCCTTTGTAGGCCACGT 59.303 50.000 5.01 0.00 40.50 4.49
146 147 2.702592 TATTCCCTTTGTAGGCCACG 57.297 50.000 5.01 0.00 40.50 4.94
147 148 4.519350 GCTTATATTCCCTTTGTAGGCCAC 59.481 45.833 5.01 1.31 40.50 5.01
148 149 4.167113 TGCTTATATTCCCTTTGTAGGCCA 59.833 41.667 5.01 0.00 40.50 5.36
149 150 4.519350 GTGCTTATATTCCCTTTGTAGGCC 59.481 45.833 0.00 0.00 40.50 5.19
150 151 4.213482 CGTGCTTATATTCCCTTTGTAGGC 59.787 45.833 0.00 0.00 40.50 3.93
151 152 4.755123 CCGTGCTTATATTCCCTTTGTAGG 59.245 45.833 0.00 0.00 41.60 3.18
152 153 4.213482 GCCGTGCTTATATTCCCTTTGTAG 59.787 45.833 0.00 0.00 0.00 2.74
153 154 4.131596 GCCGTGCTTATATTCCCTTTGTA 58.868 43.478 0.00 0.00 0.00 2.41
154 155 2.949644 GCCGTGCTTATATTCCCTTTGT 59.050 45.455 0.00 0.00 0.00 2.83
155 156 2.032030 CGCCGTGCTTATATTCCCTTTG 60.032 50.000 0.00 0.00 0.00 2.77
156 157 2.158871 TCGCCGTGCTTATATTCCCTTT 60.159 45.455 0.00 0.00 0.00 3.11
157 158 1.414919 TCGCCGTGCTTATATTCCCTT 59.585 47.619 0.00 0.00 0.00 3.95
158 159 1.045407 TCGCCGTGCTTATATTCCCT 58.955 50.000 0.00 0.00 0.00 4.20
159 160 1.873698 TTCGCCGTGCTTATATTCCC 58.126 50.000 0.00 0.00 0.00 3.97
160 161 4.927425 TCTTATTCGCCGTGCTTATATTCC 59.073 41.667 0.00 0.00 0.00 3.01
161 162 5.862323 TCTCTTATTCGCCGTGCTTATATTC 59.138 40.000 0.00 0.00 0.00 1.75
162 163 5.779922 TCTCTTATTCGCCGTGCTTATATT 58.220 37.500 0.00 0.00 0.00 1.28
163 164 5.386958 TCTCTTATTCGCCGTGCTTATAT 57.613 39.130 0.00 0.00 0.00 0.86
164 165 4.841443 TCTCTTATTCGCCGTGCTTATA 57.159 40.909 0.00 0.00 0.00 0.98
165 166 3.728076 TCTCTTATTCGCCGTGCTTAT 57.272 42.857 0.00 0.00 0.00 1.73
166 167 3.513680 TTCTCTTATTCGCCGTGCTTA 57.486 42.857 0.00 0.00 0.00 3.09
167 168 2.380084 TTCTCTTATTCGCCGTGCTT 57.620 45.000 0.00 0.00 0.00 3.91
168 169 2.205074 CATTCTCTTATTCGCCGTGCT 58.795 47.619 0.00 0.00 0.00 4.40
169 170 1.261619 CCATTCTCTTATTCGCCGTGC 59.738 52.381 0.00 0.00 0.00 5.34
170 171 1.867233 CCCATTCTCTTATTCGCCGTG 59.133 52.381 0.00 0.00 0.00 4.94
171 172 1.810412 GCCCATTCTCTTATTCGCCGT 60.810 52.381 0.00 0.00 0.00 5.68
172 173 0.868406 GCCCATTCTCTTATTCGCCG 59.132 55.000 0.00 0.00 0.00 6.46
173 174 1.967319 TGCCCATTCTCTTATTCGCC 58.033 50.000 0.00 0.00 0.00 5.54
174 175 4.370364 TTTTGCCCATTCTCTTATTCGC 57.630 40.909 0.00 0.00 0.00 4.70
193 194 3.576861 CACCTTCCCCTTTCTCCTTTTT 58.423 45.455 0.00 0.00 0.00 1.94
194 195 2.756576 GCACCTTCCCCTTTCTCCTTTT 60.757 50.000 0.00 0.00 0.00 2.27
195 196 1.203063 GCACCTTCCCCTTTCTCCTTT 60.203 52.381 0.00 0.00 0.00 3.11
196 197 0.405973 GCACCTTCCCCTTTCTCCTT 59.594 55.000 0.00 0.00 0.00 3.36
197 198 1.501654 GGCACCTTCCCCTTTCTCCT 61.502 60.000 0.00 0.00 0.00 3.69
198 199 1.000771 GGCACCTTCCCCTTTCTCC 60.001 63.158 0.00 0.00 0.00 3.71
199 200 4.745116 GGCACCTTCCCCTTTCTC 57.255 61.111 0.00 0.00 0.00 2.87
212 213 0.739813 CACACTAACTAGCCGGGCAC 60.740 60.000 23.09 0.00 0.00 5.01
213 214 1.594833 CACACTAACTAGCCGGGCA 59.405 57.895 23.09 6.38 0.00 5.36
214 215 1.153429 CCACACTAACTAGCCGGGC 60.153 63.158 12.11 12.11 0.00 6.13
215 216 1.153429 GCCACACTAACTAGCCGGG 60.153 63.158 2.18 0.00 0.00 5.73
216 217 1.153429 GGCCACACTAACTAGCCGG 60.153 63.158 0.00 0.00 33.18 6.13
217 218 4.515404 GGCCACACTAACTAGCCG 57.485 61.111 0.00 0.00 33.18 5.52
218 219 0.459759 GTCGGCCACACTAACTAGCC 60.460 60.000 2.24 0.00 40.33 3.93
219 220 0.801067 CGTCGGCCACACTAACTAGC 60.801 60.000 2.24 0.00 0.00 3.42
220 221 0.179145 CCGTCGGCCACACTAACTAG 60.179 60.000 2.24 0.00 0.00 2.57
221 222 1.885157 CCGTCGGCCACACTAACTA 59.115 57.895 2.24 0.00 0.00 2.24
222 223 2.654877 CCGTCGGCCACACTAACT 59.345 61.111 2.24 0.00 0.00 2.24
223 224 3.116531 GCCGTCGGCCACACTAAC 61.117 66.667 26.23 0.00 44.06 2.34
238 239 4.803426 CTCCGACTCCACAGCGCC 62.803 72.222 2.29 0.00 0.00 6.53
239 240 2.564553 ATTCTCCGACTCCACAGCGC 62.565 60.000 0.00 0.00 0.00 5.92
240 241 0.108615 AATTCTCCGACTCCACAGCG 60.109 55.000 0.00 0.00 0.00 5.18
241 242 1.363744 CAATTCTCCGACTCCACAGC 58.636 55.000 0.00 0.00 0.00 4.40
242 243 1.338105 TGCAATTCTCCGACTCCACAG 60.338 52.381 0.00 0.00 0.00 3.66
243 244 0.684535 TGCAATTCTCCGACTCCACA 59.315 50.000 0.00 0.00 0.00 4.17
244 245 1.079503 GTGCAATTCTCCGACTCCAC 58.920 55.000 0.00 0.00 0.00 4.02
245 246 0.684535 TGTGCAATTCTCCGACTCCA 59.315 50.000 0.00 0.00 0.00 3.86
246 247 1.338200 ACTGTGCAATTCTCCGACTCC 60.338 52.381 0.00 0.00 0.00 3.85
247 248 1.728971 CACTGTGCAATTCTCCGACTC 59.271 52.381 0.00 0.00 0.00 3.36
248 249 1.070758 ACACTGTGCAATTCTCCGACT 59.929 47.619 7.90 0.00 0.00 4.18
249 250 1.512926 ACACTGTGCAATTCTCCGAC 58.487 50.000 7.90 0.00 0.00 4.79
250 251 2.254546 AACACTGTGCAATTCTCCGA 57.745 45.000 7.90 0.00 0.00 4.55
251 252 2.159627 GGTAACACTGTGCAATTCTCCG 59.840 50.000 7.90 0.00 0.00 4.63
252 253 2.488153 GGGTAACACTGTGCAATTCTCC 59.512 50.000 7.90 2.30 39.74 3.71
253 254 3.412386 AGGGTAACACTGTGCAATTCTC 58.588 45.455 7.90 0.00 39.74 2.87
254 255 3.508845 AGGGTAACACTGTGCAATTCT 57.491 42.857 7.90 0.00 39.74 2.40
255 256 4.298332 CAAAGGGTAACACTGTGCAATTC 58.702 43.478 7.90 0.00 39.74 2.17
256 257 3.069443 CCAAAGGGTAACACTGTGCAATT 59.931 43.478 7.90 0.00 39.74 2.32
257 258 2.627699 CCAAAGGGTAACACTGTGCAAT 59.372 45.455 7.90 0.00 39.74 3.56
258 259 2.028130 CCAAAGGGTAACACTGTGCAA 58.972 47.619 7.90 0.00 39.74 4.08
259 260 1.686355 CCAAAGGGTAACACTGTGCA 58.314 50.000 7.90 0.00 39.74 4.57
260 261 0.313987 GCCAAAGGGTAACACTGTGC 59.686 55.000 7.90 0.00 36.17 4.57
261 262 1.981256 AGCCAAAGGGTAACACTGTG 58.019 50.000 6.19 6.19 36.17 3.66
262 263 2.306847 CAAGCCAAAGGGTAACACTGT 58.693 47.619 0.00 0.00 36.17 3.55
263 264 2.306847 ACAAGCCAAAGGGTAACACTG 58.693 47.619 0.00 0.00 36.17 3.66
264 265 2.748209 ACAAGCCAAAGGGTAACACT 57.252 45.000 0.00 0.00 36.17 3.55
265 266 6.578163 TTAATACAAGCCAAAGGGTAACAC 57.422 37.500 0.00 0.00 36.17 3.32
266 267 7.784470 ATTTAATACAAGCCAAAGGGTAACA 57.216 32.000 0.00 0.00 36.17 2.41
267 268 8.931775 CAAATTTAATACAAGCCAAAGGGTAAC 58.068 33.333 0.00 0.00 36.17 2.50
268 269 8.871125 TCAAATTTAATACAAGCCAAAGGGTAA 58.129 29.630 0.00 0.00 36.17 2.85
269 270 8.423906 TCAAATTTAATACAAGCCAAAGGGTA 57.576 30.769 0.00 0.00 36.17 3.69
270 271 7.309770 TCAAATTTAATACAAGCCAAAGGGT 57.690 32.000 0.00 0.00 36.17 4.34
307 308 9.974980 GTGGGACTTTTAGACAAAATAAATGAA 57.025 29.630 0.00 0.00 33.27 2.57
308 309 8.293867 CGTGGGACTTTTAGACAAAATAAATGA 58.706 33.333 0.00 0.00 33.27 2.57
309 310 8.293867 TCGTGGGACTTTTAGACAAAATAAATG 58.706 33.333 0.00 0.00 33.27 2.32
310 311 8.294577 GTCGTGGGACTTTTAGACAAAATAAAT 58.705 33.333 0.00 0.00 40.15 1.40
311 312 7.255208 GGTCGTGGGACTTTTAGACAAAATAAA 60.255 37.037 0.00 0.00 42.97 1.40
312 313 6.205270 GGTCGTGGGACTTTTAGACAAAATAA 59.795 38.462 0.00 0.00 42.97 1.40
313 314 5.702209 GGTCGTGGGACTTTTAGACAAAATA 59.298 40.000 0.00 0.00 42.97 1.40
314 315 4.517832 GGTCGTGGGACTTTTAGACAAAAT 59.482 41.667 0.00 0.00 42.97 1.82
315 316 3.878699 GGTCGTGGGACTTTTAGACAAAA 59.121 43.478 0.00 0.00 42.97 2.44
316 317 3.469739 GGTCGTGGGACTTTTAGACAAA 58.530 45.455 0.00 0.00 42.97 2.83
317 318 2.224354 GGGTCGTGGGACTTTTAGACAA 60.224 50.000 0.00 0.00 42.97 3.18
318 319 1.345415 GGGTCGTGGGACTTTTAGACA 59.655 52.381 0.00 0.00 42.97 3.41
319 320 1.622312 AGGGTCGTGGGACTTTTAGAC 59.378 52.381 0.00 0.00 42.97 2.59
320 321 2.019807 AGGGTCGTGGGACTTTTAGA 57.980 50.000 0.00 0.00 42.97 2.10
321 322 2.812011 CAAAGGGTCGTGGGACTTTTAG 59.188 50.000 0.00 0.00 42.97 1.85
322 323 2.487625 CCAAAGGGTCGTGGGACTTTTA 60.488 50.000 0.00 0.00 42.97 1.52
323 324 1.687563 CAAAGGGTCGTGGGACTTTT 58.312 50.000 0.00 0.00 42.97 2.27
324 325 0.179001 CCAAAGGGTCGTGGGACTTT 60.179 55.000 0.00 0.00 42.97 2.66
325 326 1.454539 CCAAAGGGTCGTGGGACTT 59.545 57.895 0.00 0.00 42.97 3.01
326 327 3.157680 CCAAAGGGTCGTGGGACT 58.842 61.111 0.00 0.00 42.97 3.85
327 328 2.671963 GCCAAAGGGTCGTGGGAC 60.672 66.667 0.00 0.00 42.66 4.46
328 329 2.457323 AAGCCAAAGGGTCGTGGGA 61.457 57.895 0.00 0.00 35.28 4.37
329 330 2.115266 AAGCCAAAGGGTCGTGGG 59.885 61.111 0.00 0.00 35.28 4.61
330 331 0.821711 TTCAAGCCAAAGGGTCGTGG 60.822 55.000 0.00 0.00 38.00 4.94
331 332 0.310854 GTTCAAGCCAAAGGGTCGTG 59.689 55.000 0.00 0.00 36.17 4.35
332 333 0.822121 GGTTCAAGCCAAAGGGTCGT 60.822 55.000 0.00 0.00 36.17 4.34
333 334 0.821711 TGGTTCAAGCCAAAGGGTCG 60.822 55.000 0.00 0.00 35.25 4.79
334 335 0.961753 CTGGTTCAAGCCAAAGGGTC 59.038 55.000 0.00 0.00 38.18 4.46
335 336 0.469892 CCTGGTTCAAGCCAAAGGGT 60.470 55.000 0.00 0.00 38.18 4.34
336 337 0.178964 TCCTGGTTCAAGCCAAAGGG 60.179 55.000 0.00 0.00 38.18 3.95
337 338 1.547372 CATCCTGGTTCAAGCCAAAGG 59.453 52.381 0.00 0.00 38.18 3.11
338 339 2.517959 TCATCCTGGTTCAAGCCAAAG 58.482 47.619 0.00 0.00 38.18 2.77
339 340 2.673775 TCATCCTGGTTCAAGCCAAA 57.326 45.000 0.00 0.00 38.18 3.28
340 341 2.673775 TTCATCCTGGTTCAAGCCAA 57.326 45.000 0.00 0.00 38.18 4.52
341 342 2.041485 TCATTCATCCTGGTTCAAGCCA 59.959 45.455 0.00 0.00 36.97 4.75
342 343 2.726821 TCATTCATCCTGGTTCAAGCC 58.273 47.619 0.00 0.00 0.00 4.35
343 344 4.996788 ATTCATTCATCCTGGTTCAAGC 57.003 40.909 0.00 0.00 0.00 4.01
344 345 6.276832 ACAATTCATTCATCCTGGTTCAAG 57.723 37.500 0.00 0.00 0.00 3.02
345 346 6.457355 CAACAATTCATTCATCCTGGTTCAA 58.543 36.000 0.00 0.00 0.00 2.69
346 347 5.047164 CCAACAATTCATTCATCCTGGTTCA 60.047 40.000 0.00 0.00 0.00 3.18
347 348 5.413499 CCAACAATTCATTCATCCTGGTTC 58.587 41.667 0.00 0.00 0.00 3.62
348 349 4.322953 GCCAACAATTCATTCATCCTGGTT 60.323 41.667 0.00 0.00 0.00 3.67
349 350 3.196254 GCCAACAATTCATTCATCCTGGT 59.804 43.478 0.00 0.00 0.00 4.00
350 351 3.735820 CGCCAACAATTCATTCATCCTGG 60.736 47.826 0.00 0.00 0.00 4.45
351 352 3.441163 CGCCAACAATTCATTCATCCTG 58.559 45.455 0.00 0.00 0.00 3.86
352 353 2.428171 CCGCCAACAATTCATTCATCCT 59.572 45.455 0.00 0.00 0.00 3.24
353 354 2.166254 ACCGCCAACAATTCATTCATCC 59.834 45.455 0.00 0.00 0.00 3.51
354 355 3.508744 ACCGCCAACAATTCATTCATC 57.491 42.857 0.00 0.00 0.00 2.92
355 356 3.006752 ACAACCGCCAACAATTCATTCAT 59.993 39.130 0.00 0.00 0.00 2.57
356 357 2.363680 ACAACCGCCAACAATTCATTCA 59.636 40.909 0.00 0.00 0.00 2.57
357 358 2.730928 CACAACCGCCAACAATTCATTC 59.269 45.455 0.00 0.00 0.00 2.67
358 359 2.547642 CCACAACCGCCAACAATTCATT 60.548 45.455 0.00 0.00 0.00 2.57
359 360 1.000731 CCACAACCGCCAACAATTCAT 59.999 47.619 0.00 0.00 0.00 2.57
360 361 0.387202 CCACAACCGCCAACAATTCA 59.613 50.000 0.00 0.00 0.00 2.57
361 362 0.387565 ACCACAACCGCCAACAATTC 59.612 50.000 0.00 0.00 0.00 2.17
362 363 0.827368 AACCACAACCGCCAACAATT 59.173 45.000 0.00 0.00 0.00 2.32
363 364 0.387565 GAACCACAACCGCCAACAAT 59.612 50.000 0.00 0.00 0.00 2.71
364 365 1.668101 GGAACCACAACCGCCAACAA 61.668 55.000 0.00 0.00 0.00 2.83
365 366 2.122167 GGAACCACAACCGCCAACA 61.122 57.895 0.00 0.00 0.00 3.33
366 367 1.388837 AAGGAACCACAACCGCCAAC 61.389 55.000 0.00 0.00 0.00 3.77
367 368 0.684805 AAAGGAACCACAACCGCCAA 60.685 50.000 0.00 0.00 0.00 4.52
368 369 0.684805 AAAAGGAACCACAACCGCCA 60.685 50.000 0.00 0.00 0.00 5.69
369 370 0.031585 GAAAAGGAACCACAACCGCC 59.968 55.000 0.00 0.00 0.00 6.13
370 371 1.029681 AGAAAAGGAACCACAACCGC 58.970 50.000 0.00 0.00 0.00 5.68
371 372 2.294074 TCAGAAAAGGAACCACAACCG 58.706 47.619 0.00 0.00 0.00 4.44
372 373 4.340950 TCATTCAGAAAAGGAACCACAACC 59.659 41.667 0.00 0.00 0.00 3.77
373 374 5.514274 TCATTCAGAAAAGGAACCACAAC 57.486 39.130 0.00 0.00 0.00 3.32
374 375 6.537453 TTTCATTCAGAAAAGGAACCACAA 57.463 33.333 0.00 0.00 43.00 3.33
396 397 1.550639 GGAACCCCCGGTACCATTTTT 60.551 52.381 13.54 0.00 33.12 1.94
397 398 0.040058 GGAACCCCCGGTACCATTTT 59.960 55.000 13.54 0.00 33.12 1.82
398 399 1.141410 TGGAACCCCCGGTACCATTT 61.141 55.000 13.54 0.00 33.12 2.32
399 400 1.541871 TGGAACCCCCGGTACCATT 60.542 57.895 13.54 0.00 33.12 3.16
400 401 2.125453 TGGAACCCCCGGTACCAT 59.875 61.111 13.54 0.00 33.12 3.55
401 402 2.929477 GTGGAACCCCCGGTACCA 60.929 66.667 13.54 0.00 33.12 3.25
412 413 3.353557 GTGGAAATAAGAGGGGTGGAAC 58.646 50.000 0.00 0.00 0.00 3.62
413 414 2.026636 CGTGGAAATAAGAGGGGTGGAA 60.027 50.000 0.00 0.00 0.00 3.53
414 415 1.557832 CGTGGAAATAAGAGGGGTGGA 59.442 52.381 0.00 0.00 0.00 4.02
415 416 1.408266 CCGTGGAAATAAGAGGGGTGG 60.408 57.143 0.00 0.00 0.00 4.61
416 417 2.017113 GCCGTGGAAATAAGAGGGGTG 61.017 57.143 0.00 0.00 0.00 4.61
417 418 0.255033 GCCGTGGAAATAAGAGGGGT 59.745 55.000 0.00 0.00 0.00 4.95
418 419 0.465642 GGCCGTGGAAATAAGAGGGG 60.466 60.000 0.00 0.00 0.00 4.79
419 420 0.465642 GGGCCGTGGAAATAAGAGGG 60.466 60.000 0.00 0.00 0.00 4.30
420 421 0.546598 AGGGCCGTGGAAATAAGAGG 59.453 55.000 0.00 0.00 0.00 3.69
421 422 2.289565 GAAGGGCCGTGGAAATAAGAG 58.710 52.381 0.00 0.00 0.00 2.85
422 423 1.631388 TGAAGGGCCGTGGAAATAAGA 59.369 47.619 0.00 0.00 0.00 2.10
423 424 2.122783 TGAAGGGCCGTGGAAATAAG 57.877 50.000 0.00 0.00 0.00 1.73
424 425 2.291282 ACATGAAGGGCCGTGGAAATAA 60.291 45.455 0.00 0.00 0.00 1.40
425 426 1.283613 ACATGAAGGGCCGTGGAAATA 59.716 47.619 0.00 0.00 0.00 1.40
426 427 0.039618 ACATGAAGGGCCGTGGAAAT 59.960 50.000 0.00 0.00 0.00 2.17
427 428 0.893270 CACATGAAGGGCCGTGGAAA 60.893 55.000 0.00 0.00 0.00 3.13
428 429 1.303236 CACATGAAGGGCCGTGGAA 60.303 57.895 0.00 0.00 0.00 3.53
429 430 2.350895 CACATGAAGGGCCGTGGA 59.649 61.111 0.00 0.00 0.00 4.02
430 431 3.443045 GCACATGAAGGGCCGTGG 61.443 66.667 0.00 0.00 42.32 4.94
436 437 2.422479 CACATGAAGAGCACATGAAGGG 59.578 50.000 13.54 0.00 45.22 3.95
437 438 2.159421 GCACATGAAGAGCACATGAAGG 60.159 50.000 13.54 5.26 45.22 3.46
438 439 2.159421 GGCACATGAAGAGCACATGAAG 60.159 50.000 13.54 7.51 45.22 3.02
439 440 1.814394 GGCACATGAAGAGCACATGAA 59.186 47.619 13.54 0.00 45.22 2.57
440 441 1.456296 GGCACATGAAGAGCACATGA 58.544 50.000 13.54 0.00 45.22 3.07
441 442 0.098200 CGGCACATGAAGAGCACATG 59.902 55.000 0.00 0.00 46.96 3.21
442 443 1.028330 CCGGCACATGAAGAGCACAT 61.028 55.000 0.00 0.00 35.32 3.21
443 444 1.672030 CCGGCACATGAAGAGCACA 60.672 57.895 0.00 0.00 35.32 4.57
444 445 3.044059 GCCGGCACATGAAGAGCAC 62.044 63.158 24.80 0.00 35.32 4.40
445 446 2.747460 GCCGGCACATGAAGAGCA 60.747 61.111 24.80 0.00 35.32 4.26
446 447 2.042831 AAGCCGGCACATGAAGAGC 61.043 57.895 31.54 0.00 0.00 4.09
447 448 0.957395 ACAAGCCGGCACATGAAGAG 60.957 55.000 31.54 9.20 0.00 2.85
448 449 1.073025 ACAAGCCGGCACATGAAGA 59.927 52.632 31.54 0.00 0.00 2.87
449 450 1.210931 CACAAGCCGGCACATGAAG 59.789 57.895 31.54 17.12 0.00 3.02
450 451 0.608856 ATCACAAGCCGGCACATGAA 60.609 50.000 31.54 17.02 0.00 2.57
451 452 1.002257 ATCACAAGCCGGCACATGA 60.002 52.632 31.54 26.74 0.00 3.07
452 453 1.138036 CATCACAAGCCGGCACATG 59.862 57.895 31.54 25.33 0.00 3.21
453 454 0.895100 AACATCACAAGCCGGCACAT 60.895 50.000 31.54 11.91 0.00 3.21
454 455 1.106351 AAACATCACAAGCCGGCACA 61.106 50.000 31.54 7.29 0.00 4.57
455 456 0.031994 AAAACATCACAAGCCGGCAC 59.968 50.000 31.54 0.00 0.00 5.01
456 457 1.610363 TAAAACATCACAAGCCGGCA 58.390 45.000 31.54 7.75 0.00 5.69
457 458 2.324860 GTTAAAACATCACAAGCCGGC 58.675 47.619 21.89 21.89 0.00 6.13
458 459 2.667171 CGGTTAAAACATCACAAGCCGG 60.667 50.000 0.00 0.00 33.87 6.13
459 460 2.031508 ACGGTTAAAACATCACAAGCCG 60.032 45.455 0.00 0.00 41.99 5.52
460 461 3.243267 ACACGGTTAAAACATCACAAGCC 60.243 43.478 0.00 0.00 0.00 4.35
461 462 3.959943 ACACGGTTAAAACATCACAAGC 58.040 40.909 0.00 0.00 0.00 4.01
462 463 5.007823 TGGTACACGGTTAAAACATCACAAG 59.992 40.000 0.00 0.00 0.00 3.16
463 464 4.880120 TGGTACACGGTTAAAACATCACAA 59.120 37.500 0.00 0.00 0.00 3.33
464 465 4.449131 TGGTACACGGTTAAAACATCACA 58.551 39.130 0.00 0.00 0.00 3.58
480 481 0.677288 CTGACGGTGGAAGTGGTACA 59.323 55.000 0.00 0.00 0.00 2.90
481 482 0.669625 GCTGACGGTGGAAGTGGTAC 60.670 60.000 0.00 0.00 0.00 3.34
482 483 0.830444 AGCTGACGGTGGAAGTGGTA 60.830 55.000 0.00 0.00 0.00 3.25
483 484 1.696097 AAGCTGACGGTGGAAGTGGT 61.696 55.000 0.00 0.00 0.00 4.16
484 485 1.071471 AAGCTGACGGTGGAAGTGG 59.929 57.895 0.00 0.00 0.00 4.00
485 486 0.249868 TCAAGCTGACGGTGGAAGTG 60.250 55.000 0.00 0.00 0.00 3.16
486 487 0.687354 ATCAAGCTGACGGTGGAAGT 59.313 50.000 0.00 0.00 0.00 3.01
487 488 1.466167 CAATCAAGCTGACGGTGGAAG 59.534 52.381 0.00 0.00 0.00 3.46
488 489 1.522668 CAATCAAGCTGACGGTGGAA 58.477 50.000 0.00 0.00 0.00 3.53
489 490 0.955428 GCAATCAAGCTGACGGTGGA 60.955 55.000 0.00 0.00 0.00 4.02
490 491 1.236616 TGCAATCAAGCTGACGGTGG 61.237 55.000 0.00 0.00 34.99 4.61
491 492 0.806868 ATGCAATCAAGCTGACGGTG 59.193 50.000 0.00 0.00 34.99 4.94
492 493 2.283298 CTATGCAATCAAGCTGACGGT 58.717 47.619 0.00 0.00 34.99 4.83
493 494 1.600957 CCTATGCAATCAAGCTGACGG 59.399 52.381 0.00 0.00 34.99 4.79
494 495 2.543012 CTCCTATGCAATCAAGCTGACG 59.457 50.000 0.00 0.00 34.99 4.35
495 496 3.539604 ACTCCTATGCAATCAAGCTGAC 58.460 45.455 0.00 0.00 34.99 3.51
496 497 3.920231 ACTCCTATGCAATCAAGCTGA 57.080 42.857 0.00 0.00 34.99 4.26
497 498 4.701765 ACTACTCCTATGCAATCAAGCTG 58.298 43.478 0.00 0.00 34.99 4.24
498 499 5.600484 AGTACTACTCCTATGCAATCAAGCT 59.400 40.000 0.00 0.00 34.99 3.74
499 500 5.848406 AGTACTACTCCTATGCAATCAAGC 58.152 41.667 0.00 0.00 0.00 4.01
513 514 0.822944 GGGCGGAGGGAGTACTACTC 60.823 65.000 15.38 15.38 44.32 2.59
514 515 1.229643 GGGCGGAGGGAGTACTACT 59.770 63.158 4.77 1.85 0.00 2.57
515 516 2.192187 CGGGCGGAGGGAGTACTAC 61.192 68.421 0.00 0.00 0.00 2.73
516 517 2.194056 CGGGCGGAGGGAGTACTA 59.806 66.667 0.00 0.00 0.00 1.82
517 518 4.835891 CCGGGCGGAGGGAGTACT 62.836 72.222 0.00 0.00 37.50 2.73
518 519 4.828296 TCCGGGCGGAGGGAGTAC 62.828 72.222 0.00 0.00 39.76 2.73
519 520 4.828296 GTCCGGGCGGAGGGAGTA 62.828 72.222 0.00 0.00 46.16 2.59
529 530 4.828296 TACTCCCTCCGTCCGGGC 62.828 72.222 0.00 0.00 41.69 6.13
530 531 2.518825 CTACTCCCTCCGTCCGGG 60.519 72.222 0.00 0.00 43.38 5.73
531 532 1.379576 AACTACTCCCTCCGTCCGG 60.380 63.158 0.00 0.00 0.00 5.14
532 533 0.679002 TCAACTACTCCCTCCGTCCG 60.679 60.000 0.00 0.00 0.00 4.79
533 534 1.104630 CTCAACTACTCCCTCCGTCC 58.895 60.000 0.00 0.00 0.00 4.79
534 535 2.125773 TCTCAACTACTCCCTCCGTC 57.874 55.000 0.00 0.00 0.00 4.79
535 536 2.561858 GTTTCTCAACTACTCCCTCCGT 59.438 50.000 0.00 0.00 0.00 4.69
536 537 2.561419 TGTTTCTCAACTACTCCCTCCG 59.439 50.000 0.00 0.00 33.58 4.63
537 538 4.618920 TTGTTTCTCAACTACTCCCTCC 57.381 45.455 0.00 0.00 33.58 4.30
538 539 5.639931 GTGATTGTTTCTCAACTACTCCCTC 59.360 44.000 0.00 0.00 38.97 4.30
539 540 5.071788 TGTGATTGTTTCTCAACTACTCCCT 59.928 40.000 0.00 0.00 38.97 4.20
540 541 5.179555 GTGTGATTGTTTCTCAACTACTCCC 59.820 44.000 0.00 0.00 38.97 4.30
541 542 5.758296 TGTGTGATTGTTTCTCAACTACTCC 59.242 40.000 0.00 0.00 38.97 3.85
542 543 6.844696 TGTGTGATTGTTTCTCAACTACTC 57.155 37.500 0.00 0.00 38.97 2.59
581 582 4.947147 TGGTTGGTGCGGACCTGC 62.947 66.667 27.28 18.23 43.58 4.85
582 583 2.669569 CTGGTTGGTGCGGACCTG 60.670 66.667 27.28 8.25 43.58 4.00
583 584 2.847234 TCTGGTTGGTGCGGACCT 60.847 61.111 27.28 0.00 43.58 3.85
584 585 2.358737 CTCTGGTTGGTGCGGACC 60.359 66.667 20.69 20.69 43.48 4.46
585 586 2.358737 CCTCTGGTTGGTGCGGAC 60.359 66.667 0.00 0.00 0.00 4.79
586 587 4.329545 GCCTCTGGTTGGTGCGGA 62.330 66.667 0.00 0.00 0.00 5.54
587 588 4.641645 TGCCTCTGGTTGGTGCGG 62.642 66.667 0.00 0.00 0.00 5.69
588 589 2.809861 ATCTGCCTCTGGTTGGTGCG 62.810 60.000 0.00 0.00 0.00 5.34
589 590 1.001641 ATCTGCCTCTGGTTGGTGC 60.002 57.895 0.00 0.00 0.00 5.01
656 664 4.007644 CAGGGTGGCAGCGAGTGA 62.008 66.667 10.99 0.00 0.00 3.41
679 687 2.754375 GTGGAAGAAAGGCGGGGA 59.246 61.111 0.00 0.00 0.00 4.81
715 732 8.888579 TCCTGACGATAAATATTTTTCTCTCC 57.111 34.615 5.91 0.00 0.00 3.71
719 736 9.220767 GGCTATCCTGACGATAAATATTTTTCT 57.779 33.333 5.91 0.00 32.93 2.52
722 739 8.918202 TTGGCTATCCTGACGATAAATATTTT 57.082 30.769 5.91 0.00 32.93 1.82
725 742 7.117812 CGTTTTGGCTATCCTGACGATAAATAT 59.882 37.037 0.00 0.00 35.90 1.28
727 744 5.236478 CGTTTTGGCTATCCTGACGATAAAT 59.764 40.000 0.00 0.00 35.90 1.40
728 745 4.569162 CGTTTTGGCTATCCTGACGATAAA 59.431 41.667 0.00 0.00 35.90 1.40
730 747 3.382227 TCGTTTTGGCTATCCTGACGATA 59.618 43.478 0.00 0.00 37.02 2.92
734 751 2.093783 CGTTCGTTTTGGCTATCCTGAC 59.906 50.000 0.00 0.00 0.00 3.51
735 752 2.343101 CGTTCGTTTTGGCTATCCTGA 58.657 47.619 0.00 0.00 0.00 3.86
736 753 1.202031 GCGTTCGTTTTGGCTATCCTG 60.202 52.381 0.00 0.00 0.00 3.86
737 754 1.084289 GCGTTCGTTTTGGCTATCCT 58.916 50.000 0.00 0.00 0.00 3.24
738 755 0.247537 CGCGTTCGTTTTGGCTATCC 60.248 55.000 0.00 0.00 0.00 2.59
739 756 0.247537 CCGCGTTCGTTTTGGCTATC 60.248 55.000 4.92 0.00 0.00 2.08
740 757 0.671163 TCCGCGTTCGTTTTGGCTAT 60.671 50.000 4.92 0.00 0.00 2.97
741 758 1.286354 CTCCGCGTTCGTTTTGGCTA 61.286 55.000 4.92 0.00 0.00 3.93
743 760 1.908066 ATCTCCGCGTTCGTTTTGGC 61.908 55.000 4.92 0.00 0.00 4.52
745 762 0.094730 GGATCTCCGCGTTCGTTTTG 59.905 55.000 4.92 0.00 0.00 2.44
749 766 1.153823 CAAGGATCTCCGCGTTCGT 60.154 57.895 4.92 0.00 42.08 3.85
750 767 1.878522 CCAAGGATCTCCGCGTTCG 60.879 63.158 4.92 0.00 42.08 3.95
778 796 4.212214 GGGCGACTGACTGATTGATTAATC 59.788 45.833 8.60 8.60 42.45 1.75
779 797 4.130118 GGGCGACTGACTGATTGATTAAT 58.870 43.478 0.00 0.00 0.00 1.40
780 798 3.055458 TGGGCGACTGACTGATTGATTAA 60.055 43.478 0.00 0.00 0.00 1.40
785 803 1.012086 CATGGGCGACTGACTGATTG 58.988 55.000 0.00 0.00 0.00 2.67
791 809 1.305930 GGTTTCCATGGGCGACTGAC 61.306 60.000 13.02 0.64 0.00 3.51
792 810 1.002624 GGTTTCCATGGGCGACTGA 60.003 57.895 13.02 0.00 0.00 3.41
794 812 2.046314 CGGTTTCCATGGGCGACT 60.046 61.111 13.02 0.00 0.00 4.18
795 813 2.046700 TCGGTTTCCATGGGCGAC 60.047 61.111 13.02 8.14 0.00 5.19
797 815 2.359354 TGTCGGTTTCCATGGGCG 60.359 61.111 13.02 0.54 0.00 6.13
798 816 2.700773 GCTGTCGGTTTCCATGGGC 61.701 63.158 13.02 0.00 0.00 5.36
799 817 2.398554 CGCTGTCGGTTTCCATGGG 61.399 63.158 13.02 0.00 0.00 4.00
800 818 3.039202 GCGCTGTCGGTTTCCATGG 62.039 63.158 4.97 4.97 35.95 3.66
818 836 1.535204 GGCCAATGGTGAGGTGGTTG 61.535 60.000 0.00 0.00 34.71 3.77
824 842 1.379044 GGACAGGCCAATGGTGAGG 60.379 63.158 5.01 0.00 36.34 3.86
826 844 0.482446 AAAGGACAGGCCAATGGTGA 59.518 50.000 5.01 0.00 40.02 4.02
831 849 0.786435 AGGGAAAAGGACAGGCCAAT 59.214 50.000 5.01 0.00 40.02 3.16
832 850 0.112412 GAGGGAAAAGGACAGGCCAA 59.888 55.000 5.01 0.00 40.02 4.52
836 854 1.299976 CGGGAGGGAAAAGGACAGG 59.700 63.158 0.00 0.00 0.00 4.00
840 858 1.921857 GGGACGGGAGGGAAAAGGA 60.922 63.158 0.00 0.00 0.00 3.36
841 859 2.675371 GGGACGGGAGGGAAAAGG 59.325 66.667 0.00 0.00 0.00 3.11
842 860 1.911702 GAGGGGACGGGAGGGAAAAG 61.912 65.000 0.00 0.00 0.00 2.27
843 861 1.921857 GAGGGGACGGGAGGGAAAA 60.922 63.158 0.00 0.00 0.00 2.29
844 862 2.285144 GAGGGGACGGGAGGGAAA 60.285 66.667 0.00 0.00 0.00 3.13
845 863 4.410033 GGAGGGGACGGGAGGGAA 62.410 72.222 0.00 0.00 0.00 3.97
865 897 4.496670 CGCTCAACTAACGGAGGG 57.503 61.111 0.00 0.00 37.67 4.30
869 901 3.186047 CGCCCGCTCAACTAACGG 61.186 66.667 0.00 0.00 46.50 4.44
871 903 3.497031 GGCGCCCGCTCAACTAAC 61.497 66.667 18.11 0.00 41.60 2.34
872 904 4.770874 GGGCGCCCGCTCAACTAA 62.771 66.667 33.60 0.00 42.14 2.24
891 923 0.251474 ACTAGTAGTGGTGGTGGCGA 60.251 55.000 0.85 0.00 0.00 5.54
965 1034 4.953868 CAACCCGCACCGACGACA 62.954 66.667 0.00 0.00 34.06 4.35
968 1037 4.752879 ATCCAACCCGCACCGACG 62.753 66.667 0.00 0.00 0.00 5.12
977 1046 2.514824 GGCAGAGCGATCCAACCC 60.515 66.667 0.00 0.00 0.00 4.11
1057 1132 3.439540 GCCCGCGGAATGCAAAGA 61.440 61.111 30.73 0.00 46.97 2.52
1103 1200 0.249868 CCGGACTTCTGCAGACAACA 60.250 55.000 18.03 0.00 0.00 3.33
1104 1201 0.951040 CCCGGACTTCTGCAGACAAC 60.951 60.000 18.03 10.12 0.00 3.32
1106 1203 1.533033 TCCCGGACTTCTGCAGACA 60.533 57.895 18.03 7.16 0.00 3.41
1107 1204 1.216710 CTCCCGGACTTCTGCAGAC 59.783 63.158 18.03 4.92 0.00 3.51
1108 1205 1.984570 CCTCCCGGACTTCTGCAGA 60.985 63.158 13.74 13.74 0.00 4.26
1109 1206 2.581354 CCTCCCGGACTTCTGCAG 59.419 66.667 7.63 7.63 0.00 4.41
1189 1288 4.717629 TCGCAGGCGGTGAAGACG 62.718 66.667 14.24 0.00 40.25 4.18
1314 1413 4.603535 GGGGGATTGGATGGCGGG 62.604 72.222 0.00 0.00 0.00 6.13
1316 1415 2.519302 GTGGGGGATTGGATGGCG 60.519 66.667 0.00 0.00 0.00 5.69
1317 1416 2.519302 CGTGGGGGATTGGATGGC 60.519 66.667 0.00 0.00 0.00 4.40
1318 1417 2.195683 CCGTGGGGGATTGGATGG 59.804 66.667 0.00 0.00 38.47 3.51
1319 1418 3.330192 TCCGTGGGGGATTGGATG 58.670 61.111 0.00 0.00 40.94 3.51
1326 1425 4.070265 AGATCCGTCCGTGGGGGA 62.070 66.667 2.73 2.73 44.68 4.81
1353 1467 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1404 1519 4.759564 GCGCTCAGCTCAATTGTG 57.240 55.556 5.13 4.05 44.04 3.33
1437 1552 6.187682 CCCATTTTGGATGTTCCTAACTAGT 58.812 40.000 0.00 0.00 40.96 2.57
1442 1557 4.683766 TCCCCATTTTGGATGTTCCTAA 57.316 40.909 0.00 0.00 40.96 2.69
1446 1561 2.700371 GGGATCCCCATTTTGGATGTTC 59.300 50.000 21.42 0.00 44.65 3.18
1484 1605 1.195448 GCTCACGACAAGAATGGTGTG 59.805 52.381 0.00 0.00 37.22 3.82
1488 1612 3.238108 ACTAGCTCACGACAAGAATGG 57.762 47.619 0.00 0.00 0.00 3.16
1510 1634 0.108472 GGGAACCGTCCGACCTTTAG 60.108 60.000 0.00 0.00 46.04 1.85
1512 1636 2.745698 GGGAACCGTCCGACCTTT 59.254 61.111 0.00 0.00 46.04 3.11
1555 1679 3.517296 TTCACCCAGGCAGACAAATTA 57.483 42.857 0.00 0.00 0.00 1.40
1566 1690 2.086869 CACAGCTACAATTCACCCAGG 58.913 52.381 0.00 0.00 0.00 4.45
1584 1708 4.381411 GGCTTCATATACTGGTTCTCCAC 58.619 47.826 0.00 0.00 39.03 4.02
1620 1744 2.234661 TGCAGTCAATGACTAGGAGGTG 59.765 50.000 16.28 3.94 41.37 4.00
1659 1783 2.098934 AGCTCAGCATAGACTCGACAAG 59.901 50.000 0.00 0.00 0.00 3.16
1984 2110 2.092211 GCGCATAAACCGGATATTCTCG 59.908 50.000 9.46 10.28 0.00 4.04
2263 2428 1.202290 GCAACATTCCCAATACTGCCG 60.202 52.381 0.00 0.00 0.00 5.69
2441 2606 2.619931 TGAATGTGAAGAGGAGGGTGA 58.380 47.619 0.00 0.00 0.00 4.02
2493 2658 5.178096 TCATAGCTTCAATCAGGTTTGGA 57.822 39.130 0.00 0.00 0.00 3.53
2495 2660 6.506500 AACTCATAGCTTCAATCAGGTTTG 57.493 37.500 0.00 0.00 0.00 2.93
2510 2675 9.646427 GTATAAAGGCATTCTCCTAACTCATAG 57.354 37.037 0.00 0.00 34.82 2.23
2513 2678 7.676683 AGTATAAAGGCATTCTCCTAACTCA 57.323 36.000 0.00 0.00 34.82 3.41
2525 2690 3.624777 AGCTGTGCAAGTATAAAGGCAT 58.375 40.909 0.00 0.00 38.68 4.40
2699 2901 7.561356 ACCATTCTGTAGGGATTTATTTTGGAG 59.439 37.037 0.00 0.00 0.00 3.86
2940 3146 5.059833 ACAAAGTCTCTGCTTCAACTAAGG 58.940 41.667 0.00 0.00 35.58 2.69
3272 3480 7.221838 TCAATTTTCTGGCAAAAGTAAAACTCG 59.778 33.333 0.00 0.00 0.00 4.18
3460 3668 6.712547 CCTTAGAAACTAGGGCATTTATCCTG 59.287 42.308 0.00 0.00 34.75 3.86
3679 3909 2.417515 GGTCAGAAAGAGGAGTTAGCCG 60.418 54.545 0.00 0.00 0.00 5.52
3795 4025 0.954452 CCTTCTTGTGGTGCTGGAAC 59.046 55.000 0.00 0.00 0.00 3.62
4163 4398 8.542497 TGTTACGCTATTGATTACTTGAAACT 57.458 30.769 0.00 0.00 0.00 2.66
4226 4461 5.464722 CAGTCCATCGACCAATCTTAGAATG 59.535 44.000 0.00 0.00 40.12 2.67
4278 4513 2.246469 TCTGCAGCAAGCCCAAAAATA 58.754 42.857 9.47 0.00 44.83 1.40
4584 4819 4.709397 CCAAACAGTATAAGGAATTGGGCA 59.291 41.667 0.00 0.00 33.80 5.36
4606 4841 1.331756 CAATAACTGCTGCGGATGACC 59.668 52.381 16.72 0.00 0.00 4.02
4613 4848 5.023920 CAGAAATGTACAATAACTGCTGCG 58.976 41.667 0.00 0.00 0.00 5.18
5928 6694 2.899838 GTGCCAGCAACGACACCA 60.900 61.111 0.00 0.00 0.00 4.17
5943 6709 0.249120 TGTTGATGGCGTAGGAGGTG 59.751 55.000 0.00 0.00 0.00 4.00
6251 7017 1.871080 AAATATTCTCTGGCTCCGCG 58.129 50.000 0.00 0.00 0.00 6.46
6253 7019 5.180117 CCAACATAAATATTCTCTGGCTCCG 59.820 44.000 0.00 0.00 0.00 4.63
6568 7339 3.467483 AGGGGAAGGGAAAGAAAAACTCT 59.533 43.478 0.00 0.00 35.13 3.24
6587 7358 3.519510 TGGTTTCTTACATGGAGAGAGGG 59.480 47.826 0.00 0.00 0.00 4.30
6640 7411 3.030291 TGGAATTCCACAAAGTTGCTGT 58.970 40.909 23.63 0.00 42.01 4.40
6700 7480 7.964604 AGGTAAAAGAAGTACATGAGTTCAC 57.035 36.000 0.00 0.00 39.63 3.18
6749 7529 2.386661 ACTCAGTATGCCGTTTGGAG 57.613 50.000 0.00 0.00 36.79 3.86
6820 7600 3.909430 TGATGACCGACAACTTCTACAC 58.091 45.455 0.00 0.00 0.00 2.90
6882 7662 5.742562 ATGTATTTTGGAAGGTATGGGGA 57.257 39.130 0.00 0.00 0.00 4.81
7017 7798 7.326789 CCTTAGTGCATTGTGTTTTTCTGTATG 59.673 37.037 0.00 0.00 0.00 2.39
7018 7799 7.370383 CCTTAGTGCATTGTGTTTTTCTGTAT 58.630 34.615 0.00 0.00 0.00 2.29
7078 7859 9.612620 AAAAGATGTGTAGAATTTAAAGAAGCG 57.387 29.630 0.00 0.00 0.00 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.