Multiple sequence alignment - TraesCS2A01G102300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G102300 chr2A 100.000 6172 0 0 1 6172 55849493 55855664 0.000000e+00 11398.0
1 TraesCS2A01G102300 chr2A 100.000 29 0 0 1159 1187 55850712 55850740 3.000000e-03 54.7
2 TraesCS2A01G102300 chr2D 90.590 5377 236 103 948 6154 55056572 55061848 0.000000e+00 6878.0
3 TraesCS2A01G102300 chr2D 87.597 645 31 17 154 774 55055959 55056578 0.000000e+00 702.0
4 TraesCS2A01G102300 chr2B 89.523 4992 221 108 1001 5840 86210282 86215123 0.000000e+00 6043.0
5 TraesCS2A01G102300 chr2B 85.597 611 53 16 5286 5874 86690512 86691109 5.290000e-170 608.0
6 TraesCS2A01G102300 chr2B 83.788 660 47 28 154 774 86209574 86210212 6.940000e-159 571.0
7 TraesCS2A01G102300 chr2B 90.437 366 14 9 4429 4790 765341707 765341359 4.360000e-126 462.0
8 TraesCS2A01G102300 chr7B 86.293 963 51 31 4434 5339 502266496 502265558 0.000000e+00 972.0
9 TraesCS2A01G102300 chr7B 85.981 963 55 26 4434 5339 66954569 66953630 0.000000e+00 957.0
10 TraesCS2A01G102300 chr7B 86.364 176 22 1 776 949 138667127 138666952 2.270000e-44 191.0
11 TraesCS2A01G102300 chr6A 96.855 159 3 1 3 161 394619133 394619289 1.320000e-66 265.0
12 TraesCS2A01G102300 chr7A 96.273 161 3 2 3 162 421792586 421792744 1.710000e-65 261.0
13 TraesCS2A01G102300 chr7A 96.815 157 3 1 3 159 436169000 436168846 1.710000e-65 261.0
14 TraesCS2A01G102300 chr7A 86.441 177 21 2 776 949 294417407 294417231 2.270000e-44 191.0
15 TraesCS2A01G102300 chr4B 96.815 157 3 1 3 159 584587714 584587560 1.710000e-65 261.0
16 TraesCS2A01G102300 chr4B 96.815 157 3 1 3 159 653652977 653653131 1.710000e-65 261.0
17 TraesCS2A01G102300 chr4B 85.165 182 27 0 776 957 640979473 640979292 2.940000e-43 187.0
18 TraesCS2A01G102300 chr4A 96.815 157 3 1 3 159 606756541 606756695 1.710000e-65 261.0
19 TraesCS2A01G102300 chr3B 96.815 157 3 1 1 157 192003740 192003894 1.710000e-65 261.0
20 TraesCS2A01G102300 chr3B 89.080 174 19 0 776 949 586516532 586516705 3.750000e-52 217.0
21 TraesCS2A01G102300 chr3B 83.803 142 20 3 2753 2893 747699349 747699488 1.400000e-26 132.0
22 TraesCS2A01G102300 chr1B 96.250 160 4 1 3 162 494221817 494221974 1.710000e-65 261.0
23 TraesCS2A01G102300 chr1B 88.506 174 18 1 777 948 367429051 367428878 6.270000e-50 209.0
24 TraesCS2A01G102300 chr1B 87.079 178 20 2 777 951 647568325 647568502 1.360000e-46 198.0
25 TraesCS2A01G102300 chr3A 93.258 178 7 4 3 179 106283068 106282895 2.210000e-64 257.0
26 TraesCS2A01G102300 chr3D 84.091 264 31 9 2629 2886 11399632 11399890 1.720000e-60 244.0
27 TraesCS2A01G102300 chr4D 87.283 173 18 3 778 947 435661896 435661725 1.760000e-45 195.0
28 TraesCS2A01G102300 chr5B 86.034 179 23 2 776 952 19354240 19354062 2.270000e-44 191.0
29 TraesCS2A01G102300 chr5B 89.320 103 11 0 3329 3431 268432472 268432574 5.020000e-26 130.0
30 TraesCS2A01G102300 chr1D 86.207 174 22 2 786 958 436121496 436121668 2.940000e-43 187.0
31 TraesCS2A01G102300 chr5D 90.291 103 10 0 3329 3431 236662764 236662662 1.080000e-27 135.0
32 TraesCS2A01G102300 chr5A 90.291 103 10 0 3329 3431 318756941 318757043 1.080000e-27 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G102300 chr2A 55849493 55855664 6171 False 11398 11398 100.0000 1 6172 1 chr2A.!!$F1 6171
1 TraesCS2A01G102300 chr2D 55055959 55061848 5889 False 3790 6878 89.0935 154 6154 2 chr2D.!!$F1 6000
2 TraesCS2A01G102300 chr2B 86209574 86215123 5549 False 3307 6043 86.6555 154 5840 2 chr2B.!!$F2 5686
3 TraesCS2A01G102300 chr2B 86690512 86691109 597 False 608 608 85.5970 5286 5874 1 chr2B.!!$F1 588
4 TraesCS2A01G102300 chr7B 502265558 502266496 938 True 972 972 86.2930 4434 5339 1 chr7B.!!$R3 905
5 TraesCS2A01G102300 chr7B 66953630 66954569 939 True 957 957 85.9810 4434 5339 1 chr7B.!!$R1 905

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
878 929 0.179059 TGTGTGCTGACGTGAATGGT 60.179 50.0 0.0 0.0 0.00 3.55 F
1161 1273 0.106708 ATACATAGGTGCTGCCGGTG 59.893 55.0 1.9 0.0 43.70 4.94 F
1403 1564 0.257328 TGTCTGCTGGGTTTGGTTGA 59.743 50.0 0.0 0.0 0.00 3.18 F
1405 1566 0.550914 TCTGCTGGGTTTGGTTGAGT 59.449 50.0 0.0 0.0 0.00 3.41 F
2981 3154 0.853530 ACAAGGAGAAGGGCAAGGTT 59.146 50.0 0.0 0.0 0.00 3.50 F
4653 4858 0.038310 ACTAGCAACCCCAAGGCTTC 59.962 55.0 0.0 0.0 39.01 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2511 2678 0.175531 TGCGAATCGGAGAGCAATCA 59.824 50.0 4.35 0.0 43.63 2.57 R
3041 3217 0.392863 TCATGGGGATGTCGCTGTTG 60.393 55.0 0.00 0.0 0.00 3.33 R
3046 3222 0.466189 AATGGTCATGGGGATGTCGC 60.466 55.0 0.00 0.0 0.00 5.19 R
3243 3424 0.997932 GAATCTCAGCTCAGCACACG 59.002 55.0 0.00 0.0 0.00 4.49 R
4767 4978 0.250793 TGGCGGTGGTAGTATTGGTG 59.749 55.0 0.00 0.0 0.00 4.17 R
5972 6326 0.471211 TCCCAGGACACGGAGACTTT 60.471 55.0 0.00 0.0 0.00 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.841957 AGACTCATTATGCATTGGAAACC 57.158 39.130 3.54 0.00 0.00 3.27
26 27 4.336433 AGACTCATTATGCATTGGAAACCG 59.664 41.667 3.54 0.00 0.00 4.44
27 28 3.181487 ACTCATTATGCATTGGAAACCGC 60.181 43.478 3.54 0.00 0.00 5.68
28 29 3.023119 TCATTATGCATTGGAAACCGCT 58.977 40.909 3.54 0.00 0.00 5.52
29 30 4.203226 TCATTATGCATTGGAAACCGCTA 58.797 39.130 3.54 0.00 0.00 4.26
30 31 4.826733 TCATTATGCATTGGAAACCGCTAT 59.173 37.500 3.54 0.00 0.00 2.97
31 32 4.566545 TTATGCATTGGAAACCGCTATG 57.433 40.909 3.54 0.00 0.00 2.23
32 33 1.832883 TGCATTGGAAACCGCTATGT 58.167 45.000 0.00 0.00 0.00 2.29
33 34 1.472082 TGCATTGGAAACCGCTATGTG 59.528 47.619 0.00 0.00 0.00 3.21
34 35 1.472480 GCATTGGAAACCGCTATGTGT 59.528 47.619 0.00 0.00 0.00 3.72
35 36 2.731968 GCATTGGAAACCGCTATGTGTG 60.732 50.000 0.00 0.00 0.00 3.82
36 37 2.552599 TTGGAAACCGCTATGTGTGA 57.447 45.000 0.00 0.00 0.00 3.58
37 38 2.779755 TGGAAACCGCTATGTGTGAT 57.220 45.000 0.00 0.00 0.00 3.06
38 39 2.355197 TGGAAACCGCTATGTGTGATG 58.645 47.619 0.00 0.00 0.00 3.07
39 40 1.670811 GGAAACCGCTATGTGTGATGG 59.329 52.381 0.00 0.00 0.00 3.51
40 41 2.356135 GAAACCGCTATGTGTGATGGT 58.644 47.619 0.00 0.00 0.00 3.55
41 42 3.527533 GAAACCGCTATGTGTGATGGTA 58.472 45.455 0.00 0.00 0.00 3.25
42 43 3.620427 AACCGCTATGTGTGATGGTAA 57.380 42.857 0.00 0.00 0.00 2.85
43 44 2.901249 ACCGCTATGTGTGATGGTAAC 58.099 47.619 0.00 0.00 0.00 2.50
72 73 5.599999 TGTTACTCTATTTGCCTCTCTCC 57.400 43.478 0.00 0.00 0.00 3.71
73 74 5.273208 TGTTACTCTATTTGCCTCTCTCCT 58.727 41.667 0.00 0.00 0.00 3.69
74 75 5.361285 TGTTACTCTATTTGCCTCTCTCCTC 59.639 44.000 0.00 0.00 0.00 3.71
75 76 3.987745 ACTCTATTTGCCTCTCTCCTCA 58.012 45.455 0.00 0.00 0.00 3.86
76 77 4.555689 ACTCTATTTGCCTCTCTCCTCAT 58.444 43.478 0.00 0.00 0.00 2.90
77 78 4.968080 ACTCTATTTGCCTCTCTCCTCATT 59.032 41.667 0.00 0.00 0.00 2.57
78 79 6.139671 ACTCTATTTGCCTCTCTCCTCATTA 58.860 40.000 0.00 0.00 0.00 1.90
79 80 6.613271 ACTCTATTTGCCTCTCTCCTCATTAA 59.387 38.462 0.00 0.00 0.00 1.40
80 81 6.821388 TCTATTTGCCTCTCTCCTCATTAAC 58.179 40.000 0.00 0.00 0.00 2.01
81 82 5.707066 ATTTGCCTCTCTCCTCATTAACT 57.293 39.130 0.00 0.00 0.00 2.24
82 83 6.814954 ATTTGCCTCTCTCCTCATTAACTA 57.185 37.500 0.00 0.00 0.00 2.24
83 84 5.860941 TTGCCTCTCTCCTCATTAACTAG 57.139 43.478 0.00 0.00 0.00 2.57
84 85 4.873010 TGCCTCTCTCCTCATTAACTAGT 58.127 43.478 0.00 0.00 0.00 2.57
85 86 5.273208 TGCCTCTCTCCTCATTAACTAGTT 58.727 41.667 13.68 13.68 0.00 2.24
86 87 5.127845 TGCCTCTCTCCTCATTAACTAGTTG 59.872 44.000 18.56 2.32 0.00 3.16
87 88 5.596845 CCTCTCTCCTCATTAACTAGTTGC 58.403 45.833 18.56 0.00 0.00 4.17
88 89 5.452636 CCTCTCTCCTCATTAACTAGTTGCC 60.453 48.000 18.56 0.00 0.00 4.52
89 90 5.023452 TCTCTCCTCATTAACTAGTTGCCA 58.977 41.667 18.56 2.52 0.00 4.92
90 91 5.086104 TCTCCTCATTAACTAGTTGCCAC 57.914 43.478 18.56 0.00 0.00 5.01
91 92 4.530553 TCTCCTCATTAACTAGTTGCCACA 59.469 41.667 18.56 0.00 0.00 4.17
92 93 5.189736 TCTCCTCATTAACTAGTTGCCACAT 59.810 40.000 18.56 0.00 0.00 3.21
93 94 5.428253 TCCTCATTAACTAGTTGCCACATC 58.572 41.667 18.56 0.00 0.00 3.06
94 95 5.045942 TCCTCATTAACTAGTTGCCACATCA 60.046 40.000 18.56 0.00 0.00 3.07
95 96 5.065218 CCTCATTAACTAGTTGCCACATCAC 59.935 44.000 18.56 0.00 0.00 3.06
96 97 4.941263 TCATTAACTAGTTGCCACATCACC 59.059 41.667 18.56 0.00 0.00 4.02
97 98 2.949177 AACTAGTTGCCACATCACCA 57.051 45.000 7.48 0.00 0.00 4.17
98 99 2.949177 ACTAGTTGCCACATCACCAA 57.051 45.000 0.00 0.00 0.00 3.67
99 100 3.439857 ACTAGTTGCCACATCACCAAT 57.560 42.857 0.00 0.00 0.00 3.16
100 101 3.766545 ACTAGTTGCCACATCACCAATT 58.233 40.909 0.00 0.00 0.00 2.32
101 102 4.151883 ACTAGTTGCCACATCACCAATTT 58.848 39.130 0.00 0.00 0.00 1.82
102 103 4.588528 ACTAGTTGCCACATCACCAATTTT 59.411 37.500 0.00 0.00 0.00 1.82
103 104 3.731089 AGTTGCCACATCACCAATTTTG 58.269 40.909 0.00 0.00 0.00 2.44
104 105 2.166821 TGCCACATCACCAATTTTGC 57.833 45.000 0.00 0.00 0.00 3.68
105 106 1.693062 TGCCACATCACCAATTTTGCT 59.307 42.857 0.00 0.00 0.00 3.91
106 107 2.104451 TGCCACATCACCAATTTTGCTT 59.896 40.909 0.00 0.00 0.00 3.91
107 108 3.323115 TGCCACATCACCAATTTTGCTTA 59.677 39.130 0.00 0.00 0.00 3.09
108 109 4.020396 TGCCACATCACCAATTTTGCTTAT 60.020 37.500 0.00 0.00 0.00 1.73
109 110 4.330620 GCCACATCACCAATTTTGCTTATG 59.669 41.667 0.00 0.00 0.00 1.90
110 111 5.481105 CCACATCACCAATTTTGCTTATGT 58.519 37.500 0.00 0.00 0.00 2.29
111 112 5.349270 CCACATCACCAATTTTGCTTATGTG 59.651 40.000 15.68 15.68 38.31 3.21
112 113 5.349270 CACATCACCAATTTTGCTTATGTGG 59.651 40.000 15.23 0.00 36.82 4.17
113 114 3.924144 TCACCAATTTTGCTTATGTGGC 58.076 40.909 0.00 0.00 0.00 5.01
114 115 3.323115 TCACCAATTTTGCTTATGTGGCA 59.677 39.130 0.00 0.00 37.97 4.92
115 116 4.020396 TCACCAATTTTGCTTATGTGGCAT 60.020 37.500 0.00 0.00 39.54 4.40
116 117 4.330620 CACCAATTTTGCTTATGTGGCATC 59.669 41.667 0.00 0.00 39.54 3.91
117 118 4.223477 ACCAATTTTGCTTATGTGGCATCT 59.777 37.500 0.00 0.00 39.54 2.90
118 119 5.421693 ACCAATTTTGCTTATGTGGCATCTA 59.578 36.000 0.00 0.00 39.54 1.98
119 120 6.098695 ACCAATTTTGCTTATGTGGCATCTAT 59.901 34.615 0.00 0.00 39.54 1.98
120 121 6.422701 CCAATTTTGCTTATGTGGCATCTATG 59.577 38.462 0.00 0.00 39.54 2.23
121 122 6.720112 ATTTTGCTTATGTGGCATCTATGT 57.280 33.333 0.00 0.00 39.54 2.29
122 123 6.528537 TTTTGCTTATGTGGCATCTATGTT 57.471 33.333 0.00 0.00 39.54 2.71
123 124 7.637631 TTTTGCTTATGTGGCATCTATGTTA 57.362 32.000 0.00 0.00 39.54 2.41
124 125 7.822161 TTTGCTTATGTGGCATCTATGTTAT 57.178 32.000 0.00 0.00 39.54 1.89
125 126 7.822161 TTGCTTATGTGGCATCTATGTTATT 57.178 32.000 0.00 0.00 39.54 1.40
126 127 8.916628 TTGCTTATGTGGCATCTATGTTATTA 57.083 30.769 0.00 0.00 39.54 0.98
127 128 8.322906 TGCTTATGTGGCATCTATGTTATTAC 57.677 34.615 0.00 0.00 34.56 1.89
128 129 7.390440 TGCTTATGTGGCATCTATGTTATTACC 59.610 37.037 0.00 0.00 34.56 2.85
129 130 7.607991 GCTTATGTGGCATCTATGTTATTACCT 59.392 37.037 0.00 0.00 0.00 3.08
133 134 7.973402 TGTGGCATCTATGTTATTACCTATGT 58.027 34.615 0.00 0.00 0.00 2.29
134 135 8.436778 TGTGGCATCTATGTTATTACCTATGTT 58.563 33.333 0.00 0.00 0.00 2.71
135 136 9.938280 GTGGCATCTATGTTATTACCTATGTTA 57.062 33.333 0.00 0.00 0.00 2.41
136 137 9.938280 TGGCATCTATGTTATTACCTATGTTAC 57.062 33.333 0.00 0.00 0.00 2.50
141 142 9.886337 TCTATGTTATTACCTATGTTACTCCCA 57.114 33.333 0.00 0.00 0.00 4.37
149 150 6.435292 ACCTATGTTACTCCCATTATGACC 57.565 41.667 0.00 0.00 0.00 4.02
150 151 5.908831 ACCTATGTTACTCCCATTATGACCA 59.091 40.000 0.00 0.00 0.00 4.02
151 152 6.043243 ACCTATGTTACTCCCATTATGACCAG 59.957 42.308 0.00 0.00 0.00 4.00
152 153 4.150897 TGTTACTCCCATTATGACCAGC 57.849 45.455 0.00 0.00 0.00 4.85
163 164 6.825721 CCCATTATGACCAGCCTAATAAGATC 59.174 42.308 0.00 0.00 0.00 2.75
167 168 5.282055 TGACCAGCCTAATAAGATCAGTG 57.718 43.478 0.00 0.00 0.00 3.66
176 178 6.869388 GCCTAATAAGATCAGTGCTACTAACC 59.131 42.308 0.00 0.00 0.00 2.85
198 200 5.688807 CCAGAGAACAATAATCATCTGGGT 58.311 41.667 10.52 0.00 46.53 4.51
199 201 6.125029 CCAGAGAACAATAATCATCTGGGTT 58.875 40.000 10.52 0.00 46.53 4.11
200 202 6.261826 CCAGAGAACAATAATCATCTGGGTTC 59.738 42.308 10.52 0.00 46.53 3.62
201 203 6.825213 CAGAGAACAATAATCATCTGGGTTCA 59.175 38.462 0.00 0.00 36.52 3.18
205 208 8.526147 AGAACAATAATCATCTGGGTTCAAAAG 58.474 33.333 0.00 0.00 36.52 2.27
206 209 8.421249 AACAATAATCATCTGGGTTCAAAAGA 57.579 30.769 0.00 0.00 0.00 2.52
214 217 5.220710 TCTGGGTTCAAAAGAGAGAAGAG 57.779 43.478 0.00 0.00 0.00 2.85
221 224 6.311690 GGTTCAAAAGAGAGAAGAGTAATCGG 59.688 42.308 0.00 0.00 0.00 4.18
226 229 5.331876 AGAGAGAAGAGTAATCGGGTTTG 57.668 43.478 0.00 0.00 0.00 2.93
269 272 5.701224 ACAAGGATCTGGGAGTAAACAAAA 58.299 37.500 0.00 0.00 0.00 2.44
270 273 5.535030 ACAAGGATCTGGGAGTAAACAAAAC 59.465 40.000 0.00 0.00 0.00 2.43
272 275 4.354087 AGGATCTGGGAGTAAACAAAACCT 59.646 41.667 0.00 0.00 0.00 3.50
301 304 2.660802 GGAAAGGCGAACGAGGGA 59.339 61.111 0.00 0.00 0.00 4.20
302 305 1.448013 GGAAAGGCGAACGAGGGAG 60.448 63.158 0.00 0.00 0.00 4.30
306 309 3.145551 GGCGAACGAGGGAGGCTA 61.146 66.667 0.00 0.00 0.00 3.93
307 310 2.413765 GCGAACGAGGGAGGCTAG 59.586 66.667 0.00 0.00 0.00 3.42
308 311 2.416432 GCGAACGAGGGAGGCTAGT 61.416 63.158 0.00 0.00 0.00 2.57
309 312 1.728672 CGAACGAGGGAGGCTAGTC 59.271 63.158 0.00 0.00 0.00 2.59
366 369 6.120220 ACGGAGGAAAGGAGTATAAAAATGG 58.880 40.000 0.00 0.00 0.00 3.16
548 583 1.635663 GGCCGTTCCAGTCAATCACG 61.636 60.000 0.00 0.00 34.01 4.35
565 600 3.127533 GCACGCACAGATCCACCC 61.128 66.667 0.00 0.00 0.00 4.61
566 601 2.436646 CACGCACAGATCCACCCC 60.437 66.667 0.00 0.00 0.00 4.95
567 602 4.082523 ACGCACAGATCCACCCCG 62.083 66.667 0.00 0.00 0.00 5.73
568 603 4.838152 CGCACAGATCCACCCCGG 62.838 72.222 0.00 0.00 0.00 5.73
622 657 2.766313 ACTCAAAATCACAGCGCAGTA 58.234 42.857 11.47 0.00 0.00 2.74
641 676 2.622962 GCACCGCTTTTTACCGCCT 61.623 57.895 0.00 0.00 0.00 5.52
652 687 4.695217 TTTTACCGCCTGATTGATTGAC 57.305 40.909 0.00 0.00 0.00 3.18
664 699 2.385013 TGATTGACTGGATGACGGTG 57.615 50.000 0.00 0.00 39.29 4.94
665 700 1.009829 GATTGACTGGATGACGGTGC 58.990 55.000 0.00 0.00 39.29 5.01
666 701 0.392998 ATTGACTGGATGACGGTGCC 60.393 55.000 0.00 0.00 39.29 5.01
695 736 3.057526 GGTAATTTGGCATTCCTATCCGC 60.058 47.826 0.00 0.00 0.00 5.54
700 741 2.743718 CATTCCTATCCGCCCGCT 59.256 61.111 0.00 0.00 0.00 5.52
701 742 1.669115 CATTCCTATCCGCCCGCTG 60.669 63.158 0.00 0.00 0.00 5.18
702 743 3.537206 ATTCCTATCCGCCCGCTGC 62.537 63.158 0.00 0.00 0.00 5.25
720 761 2.365586 CCCCCAGAGAGCACAGGAG 61.366 68.421 0.00 0.00 0.00 3.69
741 782 5.474876 GGAGGAATGCAGAGAAAAGAAAAGA 59.525 40.000 0.00 0.00 0.00 2.52
774 825 3.493503 GGCGGTGGATCGAGTTTTTATAG 59.506 47.826 0.00 0.00 0.00 1.31
776 827 4.208666 GCGGTGGATCGAGTTTTTATAGAC 59.791 45.833 0.00 0.00 0.00 2.59
777 828 5.345702 CGGTGGATCGAGTTTTTATAGACA 58.654 41.667 0.00 0.00 0.00 3.41
778 829 5.459107 CGGTGGATCGAGTTTTTATAGACAG 59.541 44.000 0.00 0.00 0.00 3.51
779 830 6.338937 GGTGGATCGAGTTTTTATAGACAGT 58.661 40.000 0.00 0.00 0.00 3.55
780 831 6.817140 GGTGGATCGAGTTTTTATAGACAGTT 59.183 38.462 0.00 0.00 0.00 3.16
781 832 7.333672 GGTGGATCGAGTTTTTATAGACAGTTT 59.666 37.037 0.00 0.00 0.00 2.66
782 833 8.718734 GTGGATCGAGTTTTTATAGACAGTTTT 58.281 33.333 0.00 0.00 0.00 2.43
783 834 8.717821 TGGATCGAGTTTTTATAGACAGTTTTG 58.282 33.333 0.00 0.00 0.00 2.44
784 835 8.718734 GGATCGAGTTTTTATAGACAGTTTTGT 58.281 33.333 0.00 0.00 41.18 2.83
799 850 7.055667 ACAGTTTTGTCAGAACTCATCTAGA 57.944 36.000 5.80 0.00 35.73 2.43
800 851 7.675062 ACAGTTTTGTCAGAACTCATCTAGAT 58.325 34.615 5.80 0.00 35.73 1.98
801 852 8.807118 ACAGTTTTGTCAGAACTCATCTAGATA 58.193 33.333 4.54 0.00 35.73 1.98
802 853 9.645059 CAGTTTTGTCAGAACTCATCTAGATAA 57.355 33.333 4.54 0.00 36.32 1.75
803 854 9.868277 AGTTTTGTCAGAACTCATCTAGATAAG 57.132 33.333 4.54 2.61 36.32 1.73
804 855 9.862371 GTTTTGTCAGAACTCATCTAGATAAGA 57.138 33.333 10.05 1.38 36.32 2.10
849 900 9.918630 ATCTTTTATAGCCATTAAATGTGATGC 57.081 29.630 0.00 0.00 0.00 3.91
850 901 9.135189 TCTTTTATAGCCATTAAATGTGATGCT 57.865 29.630 0.00 0.00 0.00 3.79
856 907 9.964354 ATAGCCATTAAATGTGATGCTATAAGA 57.036 29.630 0.00 0.00 0.00 2.10
857 908 8.874744 AGCCATTAAATGTGATGCTATAAGAT 57.125 30.769 0.00 0.00 0.00 2.40
858 909 8.737175 AGCCATTAAATGTGATGCTATAAGATG 58.263 33.333 0.00 0.00 0.00 2.90
859 910 8.517878 GCCATTAAATGTGATGCTATAAGATGT 58.482 33.333 0.00 0.00 0.00 3.06
860 911 9.836076 CCATTAAATGTGATGCTATAAGATGTG 57.164 33.333 0.00 0.00 0.00 3.21
863 914 7.870509 AAATGTGATGCTATAAGATGTGTGT 57.129 32.000 0.00 0.00 0.00 3.72
864 915 6.856135 ATGTGATGCTATAAGATGTGTGTG 57.144 37.500 0.00 0.00 0.00 3.82
865 916 4.571984 TGTGATGCTATAAGATGTGTGTGC 59.428 41.667 0.00 0.00 0.00 4.57
866 917 4.813161 GTGATGCTATAAGATGTGTGTGCT 59.187 41.667 0.00 0.00 0.00 4.40
867 918 4.812626 TGATGCTATAAGATGTGTGTGCTG 59.187 41.667 0.00 0.00 0.00 4.41
868 919 4.470334 TGCTATAAGATGTGTGTGCTGA 57.530 40.909 0.00 0.00 0.00 4.26
869 920 4.183865 TGCTATAAGATGTGTGTGCTGAC 58.816 43.478 0.00 0.00 0.00 3.51
870 921 3.243877 GCTATAAGATGTGTGTGCTGACG 59.756 47.826 0.00 0.00 0.00 4.35
871 922 2.812358 TAAGATGTGTGTGCTGACGT 57.188 45.000 0.00 0.00 0.00 4.34
872 923 1.220529 AAGATGTGTGTGCTGACGTG 58.779 50.000 0.00 0.00 0.00 4.49
873 924 0.389025 AGATGTGTGTGCTGACGTGA 59.611 50.000 0.00 0.00 0.00 4.35
874 925 1.202521 AGATGTGTGTGCTGACGTGAA 60.203 47.619 0.00 0.00 0.00 3.18
875 926 1.800586 GATGTGTGTGCTGACGTGAAT 59.199 47.619 0.00 0.00 0.00 2.57
876 927 0.936600 TGTGTGTGCTGACGTGAATG 59.063 50.000 0.00 0.00 0.00 2.67
877 928 0.235665 GTGTGTGCTGACGTGAATGG 59.764 55.000 0.00 0.00 0.00 3.16
878 929 0.179059 TGTGTGCTGACGTGAATGGT 60.179 50.000 0.00 0.00 0.00 3.55
879 930 1.069358 TGTGTGCTGACGTGAATGGTA 59.931 47.619 0.00 0.00 0.00 3.25
880 931 2.289382 TGTGTGCTGACGTGAATGGTAT 60.289 45.455 0.00 0.00 0.00 2.73
881 932 3.056465 TGTGTGCTGACGTGAATGGTATA 60.056 43.478 0.00 0.00 0.00 1.47
882 933 4.119862 GTGTGCTGACGTGAATGGTATAT 58.880 43.478 0.00 0.00 0.00 0.86
883 934 4.025730 GTGTGCTGACGTGAATGGTATATG 60.026 45.833 0.00 0.00 0.00 1.78
884 935 4.119862 GTGCTGACGTGAATGGTATATGT 58.880 43.478 0.00 0.00 0.00 2.29
885 936 4.570772 GTGCTGACGTGAATGGTATATGTT 59.429 41.667 0.00 0.00 0.00 2.71
886 937 5.064707 GTGCTGACGTGAATGGTATATGTTT 59.935 40.000 0.00 0.00 0.00 2.83
887 938 5.645929 TGCTGACGTGAATGGTATATGTTTT 59.354 36.000 0.00 0.00 0.00 2.43
888 939 6.150307 TGCTGACGTGAATGGTATATGTTTTT 59.850 34.615 0.00 0.00 0.00 1.94
889 940 6.468956 GCTGACGTGAATGGTATATGTTTTTG 59.531 38.462 0.00 0.00 0.00 2.44
890 941 7.441890 TGACGTGAATGGTATATGTTTTTGT 57.558 32.000 0.00 0.00 0.00 2.83
891 942 7.877003 TGACGTGAATGGTATATGTTTTTGTT 58.123 30.769 0.00 0.00 0.00 2.83
892 943 8.353684 TGACGTGAATGGTATATGTTTTTGTTT 58.646 29.630 0.00 0.00 0.00 2.83
893 944 9.187455 GACGTGAATGGTATATGTTTTTGTTTT 57.813 29.630 0.00 0.00 0.00 2.43
894 945 9.535878 ACGTGAATGGTATATGTTTTTGTTTTT 57.464 25.926 0.00 0.00 0.00 1.94
913 964 9.883142 TTGTTTTTCAAATAATTGAGACCAAGT 57.117 25.926 0.00 0.00 45.82 3.16
914 965 9.883142 TGTTTTTCAAATAATTGAGACCAAGTT 57.117 25.926 0.00 0.00 45.82 2.66
928 979 9.868160 TTGAGACCAAGTTATATCTCATCTAGA 57.132 33.333 11.60 0.00 45.22 2.43
945 996 9.921637 CTCATCTAGATGAATTTTAGGTACTCC 57.078 37.037 30.28 0.00 46.10 3.85
946 997 8.871125 TCATCTAGATGAATTTTAGGTACTCCC 58.129 37.037 29.15 0.00 44.14 4.30
947 998 8.875168 CATCTAGATGAATTTTAGGTACTCCCT 58.125 37.037 25.78 0.00 43.27 4.20
948 999 8.855804 TCTAGATGAATTTTAGGTACTCCCTT 57.144 34.615 0.00 0.00 42.73 3.95
949 1000 9.280456 TCTAGATGAATTTTAGGTACTCCCTTT 57.720 33.333 0.00 0.00 42.73 3.11
950 1001 9.907229 CTAGATGAATTTTAGGTACTCCCTTTT 57.093 33.333 0.00 0.00 42.73 2.27
965 1016 2.703536 CCCTTTTATAAATGGGGCCACC 59.296 50.000 29.49 2.19 45.14 4.61
1063 1157 3.879351 GACAGGCGCGTTTTGCAGG 62.879 63.158 8.43 0.00 46.97 4.85
1064 1158 4.705519 CAGGCGCGTTTTGCAGGG 62.706 66.667 8.43 0.00 46.97 4.45
1118 1222 2.684104 CCTCGTCCTCTCCTCCCA 59.316 66.667 0.00 0.00 0.00 4.37
1151 1263 1.002087 GCGGCCAGCTTATACATAGGT 59.998 52.381 2.24 0.00 44.04 3.08
1152 1264 2.688507 CGGCCAGCTTATACATAGGTG 58.311 52.381 2.24 0.00 40.03 4.00
1153 1265 2.427506 GGCCAGCTTATACATAGGTGC 58.572 52.381 0.00 0.00 39.24 5.01
1154 1266 2.039084 GGCCAGCTTATACATAGGTGCT 59.961 50.000 0.00 0.00 39.24 4.40
1155 1267 3.070018 GCCAGCTTATACATAGGTGCTG 58.930 50.000 9.81 9.81 44.97 4.41
1156 1268 3.070018 CCAGCTTATACATAGGTGCTGC 58.930 50.000 10.98 0.00 44.30 5.25
1157 1269 3.070018 CAGCTTATACATAGGTGCTGCC 58.930 50.000 4.88 0.00 40.75 4.85
1160 1272 1.712056 TATACATAGGTGCTGCCGGT 58.288 50.000 1.90 0.00 43.70 5.28
1161 1273 0.106708 ATACATAGGTGCTGCCGGTG 59.893 55.000 1.90 0.00 43.70 4.94
1162 1274 2.587322 TACATAGGTGCTGCCGGTGC 62.587 60.000 13.41 13.41 43.70 5.01
1163 1275 3.402681 ATAGGTGCTGCCGGTGCT 61.403 61.111 19.25 5.40 43.70 4.40
1164 1276 3.687321 ATAGGTGCTGCCGGTGCTG 62.687 63.158 19.25 4.91 43.70 4.41
1211 1323 1.911702 GACGGAAGGGAAGGGAAGGG 61.912 65.000 0.00 0.00 0.00 3.95
1212 1324 1.615424 CGGAAGGGAAGGGAAGGGA 60.615 63.158 0.00 0.00 0.00 4.20
1213 1325 1.205460 CGGAAGGGAAGGGAAGGGAA 61.205 60.000 0.00 0.00 0.00 3.97
1215 1327 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
1216 1328 0.851332 AAGGGAAGGGAAGGGAAGGG 60.851 60.000 0.00 0.00 0.00 3.95
1217 1329 1.230182 GGGAAGGGAAGGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
1218 1330 0.849540 GGGAAGGGAAGGGAAGGGAA 60.850 60.000 0.00 0.00 0.00 3.97
1219 1331 0.626382 GGAAGGGAAGGGAAGGGAAG 59.374 60.000 0.00 0.00 0.00 3.46
1220 1332 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
1224 1344 1.501654 GGAAGGGAAGGGAAGGTGCT 61.502 60.000 0.00 0.00 0.00 4.40
1227 1347 2.361737 GGAAGGGAAGGTGCTGCC 60.362 66.667 0.00 0.00 37.58 4.85
1229 1349 4.351054 AAGGGAAGGTGCTGCCGG 62.351 66.667 0.00 0.00 43.70 6.13
1262 1398 1.154814 GCTCGCTAGCTAACCCTTGC 61.155 60.000 13.93 0.00 45.85 4.01
1263 1399 0.530870 CTCGCTAGCTAACCCTTGCC 60.531 60.000 13.93 0.00 31.29 4.52
1264 1400 1.220749 CGCTAGCTAACCCTTGCCA 59.779 57.895 13.93 0.00 31.29 4.92
1265 1401 1.090052 CGCTAGCTAACCCTTGCCAC 61.090 60.000 13.93 0.00 31.29 5.01
1266 1402 0.748367 GCTAGCTAACCCTTGCCACC 60.748 60.000 7.70 0.00 0.00 4.61
1267 1403 0.618458 CTAGCTAACCCTTGCCACCA 59.382 55.000 0.00 0.00 0.00 4.17
1268 1404 0.326927 TAGCTAACCCTTGCCACCAC 59.673 55.000 0.00 0.00 0.00 4.16
1276 1412 4.329545 TTGCCACCACCGAGCTCC 62.330 66.667 8.47 0.00 0.00 4.70
1353 1500 4.671590 TGTGCGAGGACGGGAGGA 62.672 66.667 0.00 0.00 40.15 3.71
1354 1501 3.827898 GTGCGAGGACGGGAGGAG 61.828 72.222 0.00 0.00 40.15 3.69
1387 1534 0.765510 AGAAGGGGTGTGAGGTTGTC 59.234 55.000 0.00 0.00 0.00 3.18
1392 1539 0.886490 GGGTGTGAGGTTGTCTGCTG 60.886 60.000 0.00 0.00 0.00 4.41
1402 1563 1.110442 TTGTCTGCTGGGTTTGGTTG 58.890 50.000 0.00 0.00 0.00 3.77
1403 1564 0.257328 TGTCTGCTGGGTTTGGTTGA 59.743 50.000 0.00 0.00 0.00 3.18
1404 1565 0.954452 GTCTGCTGGGTTTGGTTGAG 59.046 55.000 0.00 0.00 0.00 3.02
1405 1566 0.550914 TCTGCTGGGTTTGGTTGAGT 59.449 50.000 0.00 0.00 0.00 3.41
1406 1567 1.064017 TCTGCTGGGTTTGGTTGAGTT 60.064 47.619 0.00 0.00 0.00 3.01
1407 1568 1.067516 CTGCTGGGTTTGGTTGAGTTG 59.932 52.381 0.00 0.00 0.00 3.16
1408 1569 1.341482 TGCTGGGTTTGGTTGAGTTGA 60.341 47.619 0.00 0.00 0.00 3.18
1409 1570 1.338020 GCTGGGTTTGGTTGAGTTGAG 59.662 52.381 0.00 0.00 0.00 3.02
1410 1571 1.338020 CTGGGTTTGGTTGAGTTGAGC 59.662 52.381 0.00 0.00 0.00 4.26
1689 1850 1.227497 CTCCTCGCCCTTCATGCTC 60.227 63.158 0.00 0.00 0.00 4.26
1704 1865 2.578178 CTCTCGCGCCAGAACTCG 60.578 66.667 6.12 0.00 0.00 4.18
1914 2078 4.162690 CCCTTCTTCGGCGGGGAG 62.163 72.222 12.17 7.16 41.25 4.30
2018 2185 2.261671 GCTCCCGCTCTTCGACAA 59.738 61.111 0.00 0.00 41.67 3.18
2269 2436 2.988839 GCCAAGATGGACCAGGCCT 61.989 63.158 10.72 0.00 40.96 5.19
2504 2671 3.186047 CGTTTCTACCAGCGGGCG 61.186 66.667 1.46 0.00 37.90 6.13
2722 2889 3.757493 CGTCTCCAACTACTTCAGGTACT 59.243 47.826 0.00 0.00 43.88 2.73
2757 2925 1.140589 CTCGCACCCACAGCTCTAG 59.859 63.158 0.00 0.00 0.00 2.43
2822 2995 4.529219 CGCAGCATCTACGGCCCA 62.529 66.667 0.00 0.00 0.00 5.36
2981 3154 0.853530 ACAAGGAGAAGGGCAAGGTT 59.146 50.000 0.00 0.00 0.00 3.50
3041 3217 2.818274 CTTCCGGCCGCAGTAACC 60.818 66.667 22.85 0.00 0.00 2.85
3046 3222 2.677003 CGGCCGCAGTAACCAACAG 61.677 63.158 14.67 0.00 0.00 3.16
3047 3223 2.561373 GCCGCAGTAACCAACAGC 59.439 61.111 0.00 0.00 37.26 4.40
3070 3251 4.216257 CGACATCCCCATGACCATTTATTC 59.784 45.833 0.00 0.00 33.72 1.75
3200 3381 3.119316 TGGTTCGTCATTGTTGCAACTTT 60.119 39.130 28.61 14.21 0.00 2.66
3243 3424 4.514066 TGTTCATATGCATGATGAGTGAGC 59.486 41.667 10.16 6.68 40.85 4.26
3274 3455 4.260170 AGCTGAGATTCTTGTGTTGGATC 58.740 43.478 0.00 0.00 0.00 3.36
3492 3674 2.776526 TTCAGCCCCACCCACACT 60.777 61.111 0.00 0.00 0.00 3.55
3493 3675 2.391130 TTCAGCCCCACCCACACTT 61.391 57.895 0.00 0.00 0.00 3.16
3504 3686 3.716006 CACACTTCTGCCGCCACG 61.716 66.667 0.00 0.00 0.00 4.94
3570 3754 4.225042 TGGCCAACAGAGAAGAGCTTATTA 59.775 41.667 0.61 0.00 0.00 0.98
3571 3755 5.104360 TGGCCAACAGAGAAGAGCTTATTAT 60.104 40.000 0.61 0.00 0.00 1.28
3572 3756 5.825151 GGCCAACAGAGAAGAGCTTATTATT 59.175 40.000 0.00 0.00 0.00 1.40
3629 3813 0.950555 TGCCGTGCTGATCTTGTGTC 60.951 55.000 0.00 0.00 0.00 3.67
3666 3850 1.598701 ATGGCTGCGGCTTCCTTTTC 61.599 55.000 18.85 0.00 38.73 2.29
3874 4058 5.222254 ACCAAACTGATCTTTTAGCCCCTTA 60.222 40.000 0.00 0.00 0.00 2.69
3974 4158 3.202706 GATCCTTTCGCGCCCACC 61.203 66.667 0.00 0.00 0.00 4.61
4041 4225 0.918619 CTACAACGGCGGTATCAACG 59.081 55.000 13.24 0.00 0.00 4.10
4059 4243 2.568090 GCAATGGTGCCAGGAACG 59.432 61.111 0.00 0.00 45.68 3.95
4060 4244 2.993471 GCAATGGTGCCAGGAACGG 61.993 63.158 0.00 0.00 45.68 4.44
4142 4326 1.379044 CTTCCCCATGTCCAGGTGC 60.379 63.158 0.00 0.00 0.00 5.01
4143 4327 1.852157 TTCCCCATGTCCAGGTGCT 60.852 57.895 0.00 0.00 0.00 4.40
4144 4328 2.044650 CCCCATGTCCAGGTGCTG 60.045 66.667 0.00 0.00 0.00 4.41
4189 4373 3.554934 TGTCCCATGCATAGTTCCATTC 58.445 45.455 0.00 0.00 0.00 2.67
4331 4515 3.559384 GCCTAATCATAGTAAGCACCCCC 60.559 52.174 0.00 0.00 0.00 5.40
4332 4516 3.650942 CCTAATCATAGTAAGCACCCCCA 59.349 47.826 0.00 0.00 0.00 4.96
4333 4517 4.289672 CCTAATCATAGTAAGCACCCCCAT 59.710 45.833 0.00 0.00 0.00 4.00
4362 4546 0.618458 TACCAGCCCATCAACACCTC 59.382 55.000 0.00 0.00 0.00 3.85
4383 4567 2.378038 GCTCCCCAGTAAAATCATGCA 58.622 47.619 0.00 0.00 0.00 3.96
4401 4585 3.988819 TGCAATGCCTTTTTCACTTACC 58.011 40.909 1.53 0.00 0.00 2.85
4440 4640 5.622346 AACCTTGGATCCTTCTCTATGTC 57.378 43.478 14.23 0.00 0.00 3.06
4579 4783 0.179051 CCTCTCCTCAAGCTGATGGC 60.179 60.000 0.00 0.00 42.19 4.40
4581 4785 0.251354 TCTCCTCAAGCTGATGGCAC 59.749 55.000 0.00 0.00 44.79 5.01
4582 4786 0.747283 CTCCTCAAGCTGATGGCACC 60.747 60.000 0.00 0.00 44.79 5.01
4653 4858 0.038310 ACTAGCAACCCCAAGGCTTC 59.962 55.000 0.00 0.00 39.01 3.86
4723 4933 8.888579 ACCATATGCATTAGTTACTGTTAGTC 57.111 34.615 3.54 0.00 0.00 2.59
4744 4954 3.564644 TCGATTACTCCTGCTGCTACTAC 59.435 47.826 0.00 0.00 0.00 2.73
4747 4957 5.106869 CGATTACTCCTGCTGCTACTACTAG 60.107 48.000 0.00 0.00 0.00 2.57
4762 4973 5.261040 ACTACTAGTAGTACCACCACCAA 57.739 43.478 29.96 0.00 43.98 3.67
4767 4978 2.105306 AGTAGTACCACCACCAACAACC 59.895 50.000 0.00 0.00 0.00 3.77
4783 4994 2.289819 ACAACCACCAATACTACCACCG 60.290 50.000 0.00 0.00 0.00 4.94
4848 5068 3.559171 CCACCGCCAATATAATAGCCACT 60.559 47.826 0.00 0.00 0.00 4.00
4849 5069 4.323180 CCACCGCCAATATAATAGCCACTA 60.323 45.833 0.00 0.00 0.00 2.74
4850 5070 4.630069 CACCGCCAATATAATAGCCACTAC 59.370 45.833 0.00 0.00 0.00 2.73
4851 5071 4.530946 ACCGCCAATATAATAGCCACTACT 59.469 41.667 0.00 0.00 0.00 2.57
4852 5072 5.718130 ACCGCCAATATAATAGCCACTACTA 59.282 40.000 0.00 0.00 0.00 1.82
4853 5073 6.127423 ACCGCCAATATAATAGCCACTACTAG 60.127 42.308 0.00 0.00 0.00 2.57
4962 5186 0.801451 CTAGTGCTCTGCTCGCTGTG 60.801 60.000 0.00 0.00 0.00 3.66
5114 5375 2.200370 TCGTGTCAGGGTGAGGGT 59.800 61.111 0.00 0.00 0.00 4.34
5121 5382 2.928396 AGGGTGAGGGTTGGACCG 60.928 66.667 0.00 0.00 39.83 4.79
5125 5386 3.691342 TGAGGGTTGGACCGCTCG 61.691 66.667 9.50 0.00 39.83 5.03
5238 5534 6.884280 TGATTTTTGACTTTCTCCTTCTCC 57.116 37.500 0.00 0.00 0.00 3.71
5248 5544 1.625818 TCTCCTTCTCCTTTGTCCTGC 59.374 52.381 0.00 0.00 0.00 4.85
5290 5586 3.879351 CTGTGCCGTTGCTTTCCGC 62.879 63.158 0.00 0.00 38.71 5.54
5469 5780 0.313987 GCCCAGAACAGAAAAACCGG 59.686 55.000 0.00 0.00 0.00 5.28
5473 5784 0.179040 AGAACAGAAAAACCGGGCGA 60.179 50.000 6.32 0.00 0.00 5.54
5522 5834 2.438021 CACGATTATTCCCCTCCTTGGA 59.562 50.000 0.00 0.00 38.35 3.53
5536 5853 5.187576 CCCTCCTTGGAGATGAGATTAGATC 59.812 48.000 17.55 0.00 38.35 2.75
5546 5863 8.686334 GGAGATGAGATTAGATCAGATTAGACC 58.314 40.741 0.00 0.00 0.00 3.85
5604 5924 2.414029 GCAGCCAAAACGAATTCGATCA 60.414 45.455 33.05 0.00 43.02 2.92
5616 5950 1.095600 TTCGATCAGTGGAGAGACGG 58.904 55.000 0.00 0.00 0.00 4.79
5617 5951 0.252197 TCGATCAGTGGAGAGACGGA 59.748 55.000 0.00 0.00 0.00 4.69
5635 5969 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
5636 5970 1.231928 GGAGGAGGAGGAGGAGGAC 59.768 68.421 0.00 0.00 0.00 3.85
5637 5971 1.152839 GAGGAGGAGGAGGAGGACG 60.153 68.421 0.00 0.00 0.00 4.79
5755 6106 1.044231 TCTGGGCGCCGGATACTTTA 61.044 55.000 22.54 0.00 33.41 1.85
5756 6107 0.034896 CTGGGCGCCGGATACTTTAT 59.965 55.000 22.54 0.00 29.82 1.40
5812 6163 0.597377 CGTTTTCAGGTGCTTTGGCC 60.597 55.000 0.00 0.00 37.74 5.36
5840 6191 0.546598 AAAGCTCCTAATCACCCGGG 59.453 55.000 22.25 22.25 0.00 5.73
5842 6193 1.049289 AGCTCCTAATCACCCGGGAC 61.049 60.000 32.02 2.64 0.00 4.46
5858 6212 1.670811 GGGACAGTTGCCGTTATGATG 59.329 52.381 0.00 0.00 0.00 3.07
5860 6214 2.351726 GGACAGTTGCCGTTATGATGAC 59.648 50.000 0.00 0.00 0.00 3.06
5868 6222 1.491670 CGTTATGATGACGCCTCCTG 58.508 55.000 0.00 0.00 33.42 3.86
5882 6236 1.356124 CTCCTGTGGGCTATGGCTAT 58.644 55.000 0.00 0.00 38.73 2.97
5884 6238 0.607489 CCTGTGGGCTATGGCTATGC 60.607 60.000 0.00 0.00 38.73 3.14
5925 6279 7.387265 TTTTCCAGGTCTATTATGGCTATGA 57.613 36.000 0.00 0.00 33.92 2.15
5926 6280 7.387265 TTTCCAGGTCTATTATGGCTATGAA 57.613 36.000 0.00 0.00 33.92 2.57
5932 6286 8.099537 CAGGTCTATTATGGCTATGAATGTCTT 58.900 37.037 0.00 0.00 0.00 3.01
5945 6299 5.910637 TGAATGTCTTCAAGCAAAAATGC 57.089 34.783 0.00 0.00 38.43 3.56
5948 6302 1.456923 GTCTTCAAGCAAAAATGCCGC 59.543 47.619 0.00 0.00 34.90 6.53
5965 6319 0.168128 CGCGGGGCTTCTAAAAACAG 59.832 55.000 0.00 0.00 0.00 3.16
5972 6326 3.317993 GGGCTTCTAAAAACAGTCTTGCA 59.682 43.478 0.00 0.00 0.00 4.08
5983 6337 1.528586 CAGTCTTGCAAAGTCTCCGTG 59.471 52.381 0.00 0.00 46.34 4.94
5984 6338 1.139058 AGTCTTGCAAAGTCTCCGTGT 59.861 47.619 0.00 0.00 46.34 4.49
5992 6346 0.471211 AAGTCTCCGTGTCCTGGGAA 60.471 55.000 0.00 0.00 0.00 3.97
5996 6350 1.702957 TCTCCGTGTCCTGGGAATTTT 59.297 47.619 0.00 0.00 0.00 1.82
5997 6351 1.812571 CTCCGTGTCCTGGGAATTTTG 59.187 52.381 0.00 0.00 0.00 2.44
5998 6352 1.144093 TCCGTGTCCTGGGAATTTTGT 59.856 47.619 0.00 0.00 0.00 2.83
6000 6354 2.747446 CCGTGTCCTGGGAATTTTGTAG 59.253 50.000 0.00 0.00 0.00 2.74
6004 6358 3.245122 TGTCCTGGGAATTTTGTAGGTCC 60.245 47.826 0.00 0.00 0.00 4.46
6039 6393 9.107177 GCTATATCCATGAGATTTATGTTGAGG 57.893 37.037 0.00 0.00 36.33 3.86
6049 6403 6.469410 AGATTTATGTTGAGGTCCGTACAAA 58.531 36.000 0.00 0.00 0.00 2.83
6050 6404 6.938030 AGATTTATGTTGAGGTCCGTACAAAA 59.062 34.615 0.00 0.00 0.00 2.44
6051 6405 6.939132 TTTATGTTGAGGTCCGTACAAAAA 57.061 33.333 0.00 0.00 0.00 1.94
6054 6408 5.427036 TGTTGAGGTCCGTACAAAAATTC 57.573 39.130 0.00 0.00 0.00 2.17
6056 6410 5.591067 TGTTGAGGTCCGTACAAAAATTCTT 59.409 36.000 0.00 0.00 0.00 2.52
6102 6456 4.758688 TCTTGCATGTTATGTCACTCGAT 58.241 39.130 0.00 0.00 0.00 3.59
6108 6462 4.649088 TGTTATGTCACTCGATTCGGAT 57.351 40.909 6.18 0.00 0.00 4.18
6112 6466 6.695713 TGTTATGTCACTCGATTCGGATTTAG 59.304 38.462 6.18 0.00 0.00 1.85
6120 6474 8.195436 TCACTCGATTCGGATTTAGTTAAATCT 58.805 33.333 18.84 4.82 46.63 2.40
6121 6475 8.818057 CACTCGATTCGGATTTAGTTAAATCTT 58.182 33.333 18.84 6.93 46.63 2.40
6122 6476 9.032420 ACTCGATTCGGATTTAGTTAAATCTTC 57.968 33.333 18.84 12.16 46.63 2.87
6128 6482 6.470235 TCGGATTTAGTTAAATCTTCGTCGAC 59.530 38.462 18.84 5.18 46.63 4.20
6132 6486 8.928270 ATTTAGTTAAATCTTCGTCGACTGAT 57.072 30.769 14.70 11.26 30.50 2.90
6143 6497 2.421073 CGTCGACTGATACCTAACCACA 59.579 50.000 14.70 0.00 0.00 4.17
6146 6500 2.494471 CGACTGATACCTAACCACACCA 59.506 50.000 0.00 0.00 0.00 4.17
6149 6503 5.099042 ACTGATACCTAACCACACCATTC 57.901 43.478 0.00 0.00 0.00 2.67
6154 6508 7.691213 TGATACCTAACCACACCATTCTAAAA 58.309 34.615 0.00 0.00 0.00 1.52
6155 6509 8.333235 TGATACCTAACCACACCATTCTAAAAT 58.667 33.333 0.00 0.00 0.00 1.82
6156 6510 9.841295 GATACCTAACCACACCATTCTAAAATA 57.159 33.333 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.387673 CGGTTTCCAATGCATAATGAGTCTATA 59.612 37.037 0.00 0.00 0.00 1.31
1 2 6.205464 CGGTTTCCAATGCATAATGAGTCTAT 59.795 38.462 0.00 0.00 0.00 1.98
2 3 5.527214 CGGTTTCCAATGCATAATGAGTCTA 59.473 40.000 0.00 0.00 0.00 2.59
3 4 4.336433 CGGTTTCCAATGCATAATGAGTCT 59.664 41.667 0.00 0.00 0.00 3.24
4 5 4.601019 CGGTTTCCAATGCATAATGAGTC 58.399 43.478 0.00 0.00 0.00 3.36
5 6 3.181487 GCGGTTTCCAATGCATAATGAGT 60.181 43.478 0.00 0.00 0.00 3.41
6 7 3.067180 AGCGGTTTCCAATGCATAATGAG 59.933 43.478 0.00 0.00 0.00 2.90
7 8 3.023119 AGCGGTTTCCAATGCATAATGA 58.977 40.909 0.00 0.00 0.00 2.57
8 9 3.441496 AGCGGTTTCCAATGCATAATG 57.559 42.857 0.00 0.00 0.00 1.90
9 10 4.584325 ACATAGCGGTTTCCAATGCATAAT 59.416 37.500 0.00 0.00 0.00 1.28
10 11 3.951037 ACATAGCGGTTTCCAATGCATAA 59.049 39.130 0.00 0.00 0.00 1.90
11 12 3.314913 CACATAGCGGTTTCCAATGCATA 59.685 43.478 0.00 0.00 0.00 3.14
12 13 2.099592 CACATAGCGGTTTCCAATGCAT 59.900 45.455 0.00 0.00 0.00 3.96
13 14 1.472082 CACATAGCGGTTTCCAATGCA 59.528 47.619 0.00 0.00 0.00 3.96
14 15 1.472480 ACACATAGCGGTTTCCAATGC 59.528 47.619 0.00 0.00 0.00 3.56
15 16 2.746904 TCACACATAGCGGTTTCCAATG 59.253 45.455 0.00 0.00 0.00 2.82
16 17 3.066291 TCACACATAGCGGTTTCCAAT 57.934 42.857 0.00 0.00 0.00 3.16
17 18 2.552599 TCACACATAGCGGTTTCCAA 57.447 45.000 0.00 0.00 0.00 3.53
18 19 2.355197 CATCACACATAGCGGTTTCCA 58.645 47.619 0.00 0.00 0.00 3.53
19 20 1.670811 CCATCACACATAGCGGTTTCC 59.329 52.381 0.00 0.00 0.00 3.13
20 21 2.356135 ACCATCACACATAGCGGTTTC 58.644 47.619 0.00 0.00 0.00 2.78
21 22 2.489938 ACCATCACACATAGCGGTTT 57.510 45.000 0.00 0.00 0.00 3.27
22 23 3.267483 GTTACCATCACACATAGCGGTT 58.733 45.455 0.00 0.00 0.00 4.44
23 24 2.235155 TGTTACCATCACACATAGCGGT 59.765 45.455 0.00 0.00 0.00 5.68
24 25 2.899976 TGTTACCATCACACATAGCGG 58.100 47.619 0.00 0.00 0.00 5.52
25 26 6.785488 AATATGTTACCATCACACATAGCG 57.215 37.500 0.00 0.00 36.94 4.26
26 27 9.219603 ACATAATATGTTACCATCACACATAGC 57.780 33.333 0.00 0.00 41.63 2.97
46 47 8.371699 GGAGAGAGGCAAATAGAGTAACATAAT 58.628 37.037 0.00 0.00 0.00 1.28
47 48 7.565398 AGGAGAGAGGCAAATAGAGTAACATAA 59.435 37.037 0.00 0.00 0.00 1.90
48 49 7.069986 AGGAGAGAGGCAAATAGAGTAACATA 58.930 38.462 0.00 0.00 0.00 2.29
49 50 5.902431 AGGAGAGAGGCAAATAGAGTAACAT 59.098 40.000 0.00 0.00 0.00 2.71
50 51 5.273208 AGGAGAGAGGCAAATAGAGTAACA 58.727 41.667 0.00 0.00 0.00 2.41
51 52 5.361285 TGAGGAGAGAGGCAAATAGAGTAAC 59.639 44.000 0.00 0.00 0.00 2.50
52 53 5.519808 TGAGGAGAGAGGCAAATAGAGTAA 58.480 41.667 0.00 0.00 0.00 2.24
53 54 5.130705 TGAGGAGAGAGGCAAATAGAGTA 57.869 43.478 0.00 0.00 0.00 2.59
54 55 3.987745 TGAGGAGAGAGGCAAATAGAGT 58.012 45.455 0.00 0.00 0.00 3.24
55 56 5.549742 AATGAGGAGAGAGGCAAATAGAG 57.450 43.478 0.00 0.00 0.00 2.43
56 57 6.613271 AGTTAATGAGGAGAGAGGCAAATAGA 59.387 38.462 0.00 0.00 0.00 1.98
57 58 6.825610 AGTTAATGAGGAGAGAGGCAAATAG 58.174 40.000 0.00 0.00 0.00 1.73
58 59 6.814954 AGTTAATGAGGAGAGAGGCAAATA 57.185 37.500 0.00 0.00 0.00 1.40
59 60 5.707066 AGTTAATGAGGAGAGAGGCAAAT 57.293 39.130 0.00 0.00 0.00 2.32
60 61 5.721960 ACTAGTTAATGAGGAGAGAGGCAAA 59.278 40.000 0.00 0.00 0.00 3.68
61 62 5.273208 ACTAGTTAATGAGGAGAGAGGCAA 58.727 41.667 0.00 0.00 0.00 4.52
62 63 4.873010 ACTAGTTAATGAGGAGAGAGGCA 58.127 43.478 0.00 0.00 0.00 4.75
63 64 5.596845 CAACTAGTTAATGAGGAGAGAGGC 58.403 45.833 8.04 0.00 0.00 4.70
64 65 5.452636 GGCAACTAGTTAATGAGGAGAGAGG 60.453 48.000 8.04 0.00 0.00 3.69
65 66 5.127845 TGGCAACTAGTTAATGAGGAGAGAG 59.872 44.000 8.04 0.00 37.61 3.20
66 67 5.023452 TGGCAACTAGTTAATGAGGAGAGA 58.977 41.667 8.04 0.00 37.61 3.10
67 68 5.112686 GTGGCAACTAGTTAATGAGGAGAG 58.887 45.833 8.04 0.00 37.61 3.20
68 69 4.530553 TGTGGCAACTAGTTAATGAGGAGA 59.469 41.667 8.04 0.00 37.61 3.71
69 70 4.832248 TGTGGCAACTAGTTAATGAGGAG 58.168 43.478 8.04 0.00 37.61 3.69
70 71 4.901197 TGTGGCAACTAGTTAATGAGGA 57.099 40.909 8.04 0.00 37.61 3.71
71 72 5.065218 GTGATGTGGCAACTAGTTAATGAGG 59.935 44.000 8.04 0.00 37.61 3.86
72 73 5.065218 GGTGATGTGGCAACTAGTTAATGAG 59.935 44.000 8.04 0.00 37.61 2.90
73 74 4.941263 GGTGATGTGGCAACTAGTTAATGA 59.059 41.667 8.04 0.00 37.61 2.57
74 75 4.699735 TGGTGATGTGGCAACTAGTTAATG 59.300 41.667 8.04 0.00 37.61 1.90
75 76 4.917385 TGGTGATGTGGCAACTAGTTAAT 58.083 39.130 8.04 0.00 37.61 1.40
76 77 4.359434 TGGTGATGTGGCAACTAGTTAA 57.641 40.909 8.04 0.00 37.61 2.01
77 78 4.359434 TTGGTGATGTGGCAACTAGTTA 57.641 40.909 8.04 0.00 37.61 2.24
78 79 2.949177 TGGTGATGTGGCAACTAGTT 57.051 45.000 1.12 1.12 37.61 2.24
79 80 2.949177 TTGGTGATGTGGCAACTAGT 57.051 45.000 0.00 0.00 37.61 2.57
80 81 4.789012 AAATTGGTGATGTGGCAACTAG 57.211 40.909 0.00 0.00 37.61 2.57
81 82 4.798924 GCAAAATTGGTGATGTGGCAACTA 60.799 41.667 0.00 0.00 37.61 2.24
82 83 3.731089 CAAAATTGGTGATGTGGCAACT 58.269 40.909 0.00 0.00 37.61 3.16
83 84 2.223845 GCAAAATTGGTGATGTGGCAAC 59.776 45.455 0.00 0.00 0.00 4.17
84 85 2.104451 AGCAAAATTGGTGATGTGGCAA 59.896 40.909 0.00 0.00 37.53 4.52
85 86 1.693062 AGCAAAATTGGTGATGTGGCA 59.307 42.857 0.00 0.00 37.53 4.92
86 87 2.460757 AGCAAAATTGGTGATGTGGC 57.539 45.000 0.00 0.00 37.53 5.01
91 92 4.020396 TGCCACATAAGCAAAATTGGTGAT 60.020 37.500 0.00 0.00 39.13 3.06
92 93 3.323115 TGCCACATAAGCAAAATTGGTGA 59.677 39.130 0.00 0.00 39.13 4.02
93 94 3.661944 TGCCACATAAGCAAAATTGGTG 58.338 40.909 0.00 0.00 39.13 4.17
94 95 4.223477 AGATGCCACATAAGCAAAATTGGT 59.777 37.500 0.00 0.00 44.83 3.67
95 96 4.761975 AGATGCCACATAAGCAAAATTGG 58.238 39.130 0.00 0.00 44.83 3.16
96 97 6.982141 ACATAGATGCCACATAAGCAAAATTG 59.018 34.615 0.00 0.00 44.83 2.32
97 98 7.116075 ACATAGATGCCACATAAGCAAAATT 57.884 32.000 0.00 0.00 44.83 1.82
98 99 6.720112 ACATAGATGCCACATAAGCAAAAT 57.280 33.333 0.00 0.00 44.83 1.82
99 100 6.528537 AACATAGATGCCACATAAGCAAAA 57.471 33.333 0.00 0.00 44.83 2.44
100 101 7.822161 ATAACATAGATGCCACATAAGCAAA 57.178 32.000 0.00 0.00 44.83 3.68
101 102 7.822161 AATAACATAGATGCCACATAAGCAA 57.178 32.000 0.00 0.00 44.83 3.91
102 103 7.390440 GGTAATAACATAGATGCCACATAAGCA 59.610 37.037 0.00 0.00 45.94 3.91
103 104 7.607991 AGGTAATAACATAGATGCCACATAAGC 59.392 37.037 0.00 0.00 0.00 3.09
107 108 8.605947 ACATAGGTAATAACATAGATGCCACAT 58.394 33.333 0.00 0.00 0.00 3.21
108 109 7.973402 ACATAGGTAATAACATAGATGCCACA 58.027 34.615 0.00 0.00 0.00 4.17
109 110 8.848474 AACATAGGTAATAACATAGATGCCAC 57.152 34.615 0.00 0.00 0.00 5.01
110 111 9.938280 GTAACATAGGTAATAACATAGATGCCA 57.062 33.333 0.00 0.00 0.00 4.92
115 116 9.886337 TGGGAGTAACATAGGTAATAACATAGA 57.114 33.333 0.00 0.00 0.00 1.98
123 124 8.603304 GGTCATAATGGGAGTAACATAGGTAAT 58.397 37.037 0.00 0.00 0.00 1.89
124 125 7.569485 TGGTCATAATGGGAGTAACATAGGTAA 59.431 37.037 0.00 0.00 0.00 2.85
125 126 7.077095 TGGTCATAATGGGAGTAACATAGGTA 58.923 38.462 0.00 0.00 0.00 3.08
126 127 5.908831 TGGTCATAATGGGAGTAACATAGGT 59.091 40.000 0.00 0.00 0.00 3.08
127 128 6.433847 TGGTCATAATGGGAGTAACATAGG 57.566 41.667 0.00 0.00 0.00 2.57
128 129 5.934625 GCTGGTCATAATGGGAGTAACATAG 59.065 44.000 0.00 0.00 0.00 2.23
129 130 5.221843 GGCTGGTCATAATGGGAGTAACATA 60.222 44.000 0.00 0.00 0.00 2.29
130 131 4.446311 GGCTGGTCATAATGGGAGTAACAT 60.446 45.833 0.00 0.00 0.00 2.71
131 132 3.118038 GGCTGGTCATAATGGGAGTAACA 60.118 47.826 0.00 0.00 0.00 2.41
132 133 3.136626 AGGCTGGTCATAATGGGAGTAAC 59.863 47.826 0.00 0.00 0.00 2.50
133 134 3.393687 AGGCTGGTCATAATGGGAGTAA 58.606 45.455 0.00 0.00 0.00 2.24
134 135 3.060479 AGGCTGGTCATAATGGGAGTA 57.940 47.619 0.00 0.00 0.00 2.59
135 136 1.898863 AGGCTGGTCATAATGGGAGT 58.101 50.000 0.00 0.00 0.00 3.85
136 137 4.647564 ATTAGGCTGGTCATAATGGGAG 57.352 45.455 0.00 0.00 31.19 4.30
137 138 5.849475 TCTTATTAGGCTGGTCATAATGGGA 59.151 40.000 0.00 0.00 34.04 4.37
138 139 6.126863 TCTTATTAGGCTGGTCATAATGGG 57.873 41.667 0.00 0.00 34.04 4.00
139 140 7.397221 TGATCTTATTAGGCTGGTCATAATGG 58.603 38.462 0.00 0.00 34.04 3.16
140 141 8.099537 ACTGATCTTATTAGGCTGGTCATAATG 58.900 37.037 0.00 0.00 34.04 1.90
141 142 8.099537 CACTGATCTTATTAGGCTGGTCATAAT 58.900 37.037 0.00 0.00 35.94 1.28
142 143 7.445121 CACTGATCTTATTAGGCTGGTCATAA 58.555 38.462 0.00 0.00 0.00 1.90
143 144 6.519043 GCACTGATCTTATTAGGCTGGTCATA 60.519 42.308 0.00 0.00 0.00 2.15
144 145 5.744300 GCACTGATCTTATTAGGCTGGTCAT 60.744 44.000 0.00 0.00 0.00 3.06
145 146 4.443457 GCACTGATCTTATTAGGCTGGTCA 60.443 45.833 0.00 0.00 0.00 4.02
146 147 4.061596 GCACTGATCTTATTAGGCTGGTC 58.938 47.826 0.00 0.00 0.00 4.02
147 148 3.713764 AGCACTGATCTTATTAGGCTGGT 59.286 43.478 0.00 0.00 0.00 4.00
148 149 4.348863 AGCACTGATCTTATTAGGCTGG 57.651 45.455 0.00 0.00 0.00 4.85
149 150 6.095432 AGTAGCACTGATCTTATTAGGCTG 57.905 41.667 0.00 0.00 0.00 4.85
150 151 7.256012 GGTTAGTAGCACTGATCTTATTAGGCT 60.256 40.741 0.00 0.00 0.00 4.58
151 152 6.869388 GGTTAGTAGCACTGATCTTATTAGGC 59.131 42.308 0.00 0.00 0.00 3.93
152 153 7.952671 TGGTTAGTAGCACTGATCTTATTAGG 58.047 38.462 0.00 0.00 0.00 2.69
163 164 4.521130 TGTTCTCTGGTTAGTAGCACTG 57.479 45.455 0.00 0.00 0.00 3.66
167 168 8.894768 ATGATTATTGTTCTCTGGTTAGTAGC 57.105 34.615 0.00 0.00 0.00 3.58
176 178 6.825213 TGAACCCAGATGATTATTGTTCTCTG 59.175 38.462 0.00 0.00 33.57 3.35
197 199 6.311690 CCCGATTACTCTTCTCTCTTTTGAAC 59.688 42.308 0.00 0.00 0.00 3.18
198 200 6.014499 ACCCGATTACTCTTCTCTCTTTTGAA 60.014 38.462 0.00 0.00 0.00 2.69
199 201 5.480772 ACCCGATTACTCTTCTCTCTTTTGA 59.519 40.000 0.00 0.00 0.00 2.69
200 202 5.725362 ACCCGATTACTCTTCTCTCTTTTG 58.275 41.667 0.00 0.00 0.00 2.44
201 203 6.361768 AACCCGATTACTCTTCTCTCTTTT 57.638 37.500 0.00 0.00 0.00 2.27
205 208 3.866327 GCAAACCCGATTACTCTTCTCTC 59.134 47.826 0.00 0.00 0.00 3.20
206 209 3.260884 TGCAAACCCGATTACTCTTCTCT 59.739 43.478 0.00 0.00 0.00 3.10
214 217 0.878416 TGCTGTGCAAACCCGATTAC 59.122 50.000 0.00 0.00 34.76 1.89
221 224 2.730094 CCCACTGCTGTGCAAACC 59.270 61.111 17.57 0.00 42.54 3.27
226 229 3.677648 CTTGCCCCACTGCTGTGC 61.678 66.667 17.57 7.80 42.54 4.57
269 272 0.179067 TTTCCGTCGCTTCACAAGGT 60.179 50.000 0.00 0.00 0.00 3.50
270 273 0.512952 CTTTCCGTCGCTTCACAAGG 59.487 55.000 0.00 0.00 0.00 3.61
272 275 1.503818 GCCTTTCCGTCGCTTCACAA 61.504 55.000 0.00 0.00 0.00 3.33
548 583 3.127533 GGGTGGATCTGTGCGTGC 61.128 66.667 0.00 0.00 0.00 5.34
622 657 2.622962 GGCGGTAAAAAGCGGTGCT 61.623 57.895 0.00 0.00 42.56 4.40
629 664 5.095490 GTCAATCAATCAGGCGGTAAAAAG 58.905 41.667 0.00 0.00 0.00 2.27
641 676 3.055167 ACCGTCATCCAGTCAATCAATCA 60.055 43.478 0.00 0.00 0.00 2.57
652 687 0.465705 ATAGTGGCACCGTCATCCAG 59.534 55.000 15.27 0.00 0.00 3.86
664 699 8.089724 AGGAATGCCAAATTACCAATAGTGGC 62.090 42.308 9.63 14.94 45.56 5.01
665 700 5.363580 AGGAATGCCAAATTACCAATAGTGG 59.636 40.000 7.88 7.88 43.67 4.00
666 701 6.469782 AGGAATGCCAAATTACCAATAGTG 57.530 37.500 0.00 0.00 36.29 2.74
700 741 3.324930 CTGTGCTCTCTGGGGGCA 61.325 66.667 0.00 0.00 0.00 5.36
701 742 4.106925 CCTGTGCTCTCTGGGGGC 62.107 72.222 0.00 0.00 0.00 5.80
702 743 2.284921 TCCTGTGCTCTCTGGGGG 60.285 66.667 0.00 0.00 0.00 5.40
703 744 2.365586 CCTCCTGTGCTCTCTGGGG 61.366 68.421 0.00 0.00 0.00 4.96
704 745 0.906756 TTCCTCCTGTGCTCTCTGGG 60.907 60.000 0.00 0.00 0.00 4.45
707 748 0.540923 GCATTCCTCCTGTGCTCTCT 59.459 55.000 0.00 0.00 36.02 3.10
720 761 5.149977 CGTCTTTTCTTTTCTCTGCATTCC 58.850 41.667 0.00 0.00 0.00 3.01
741 782 3.991051 CACCGCCTCTGTCACCGT 61.991 66.667 0.00 0.00 0.00 4.83
774 825 7.148641 TCTAGATGAGTTCTGACAAAACTGTC 58.851 38.462 0.00 0.00 37.10 3.51
776 827 9.645059 TTATCTAGATGAGTTCTGACAAAACTG 57.355 33.333 15.79 0.00 37.10 3.16
777 828 9.868277 CTTATCTAGATGAGTTCTGACAAAACT 57.132 33.333 15.79 0.00 39.61 2.66
778 829 9.862371 TCTTATCTAGATGAGTTCTGACAAAAC 57.138 33.333 20.53 0.00 35.79 2.43
823 874 9.918630 GCATCACATTTAATGGCTATAAAAGAT 57.081 29.630 9.88 4.84 33.60 2.40
824 875 9.135189 AGCATCACATTTAATGGCTATAAAAGA 57.865 29.630 9.88 3.31 33.60 2.52
830 881 9.964354 TCTTATAGCATCACATTTAATGGCTAT 57.036 29.630 21.11 21.11 32.32 2.97
831 882 9.964354 ATCTTATAGCATCACATTTAATGGCTA 57.036 29.630 9.88 11.83 33.60 3.93
832 883 8.737175 CATCTTATAGCATCACATTTAATGGCT 58.263 33.333 9.88 10.13 33.60 4.75
833 884 8.517878 ACATCTTATAGCATCACATTTAATGGC 58.482 33.333 9.88 3.12 33.60 4.40
834 885 9.836076 CACATCTTATAGCATCACATTTAATGG 57.164 33.333 9.88 0.00 33.60 3.16
837 888 9.394767 ACACACATCTTATAGCATCACATTTAA 57.605 29.630 0.00 0.00 0.00 1.52
838 889 8.829612 CACACACATCTTATAGCATCACATTTA 58.170 33.333 0.00 0.00 0.00 1.40
839 890 7.680350 GCACACACATCTTATAGCATCACATTT 60.680 37.037 0.00 0.00 0.00 2.32
840 891 6.238566 GCACACACATCTTATAGCATCACATT 60.239 38.462 0.00 0.00 0.00 2.71
841 892 5.237996 GCACACACATCTTATAGCATCACAT 59.762 40.000 0.00 0.00 0.00 3.21
842 893 4.571984 GCACACACATCTTATAGCATCACA 59.428 41.667 0.00 0.00 0.00 3.58
843 894 4.813161 AGCACACACATCTTATAGCATCAC 59.187 41.667 0.00 0.00 0.00 3.06
844 895 4.812626 CAGCACACACATCTTATAGCATCA 59.187 41.667 0.00 0.00 0.00 3.07
845 896 5.050499 GTCAGCACACACATCTTATAGCATC 60.050 44.000 0.00 0.00 0.00 3.91
846 897 4.813161 GTCAGCACACACATCTTATAGCAT 59.187 41.667 0.00 0.00 0.00 3.79
847 898 4.183865 GTCAGCACACACATCTTATAGCA 58.816 43.478 0.00 0.00 0.00 3.49
848 899 3.243877 CGTCAGCACACACATCTTATAGC 59.756 47.826 0.00 0.00 0.00 2.97
849 900 4.266265 CACGTCAGCACACACATCTTATAG 59.734 45.833 0.00 0.00 0.00 1.31
850 901 4.082463 TCACGTCAGCACACACATCTTATA 60.082 41.667 0.00 0.00 0.00 0.98
851 902 2.995939 CACGTCAGCACACACATCTTAT 59.004 45.455 0.00 0.00 0.00 1.73
852 903 2.035321 TCACGTCAGCACACACATCTTA 59.965 45.455 0.00 0.00 0.00 2.10
853 904 1.202521 TCACGTCAGCACACACATCTT 60.203 47.619 0.00 0.00 0.00 2.40
854 905 0.389025 TCACGTCAGCACACACATCT 59.611 50.000 0.00 0.00 0.00 2.90
855 906 1.217001 TTCACGTCAGCACACACATC 58.783 50.000 0.00 0.00 0.00 3.06
856 907 1.532437 CATTCACGTCAGCACACACAT 59.468 47.619 0.00 0.00 0.00 3.21
857 908 0.936600 CATTCACGTCAGCACACACA 59.063 50.000 0.00 0.00 0.00 3.72
858 909 0.235665 CCATTCACGTCAGCACACAC 59.764 55.000 0.00 0.00 0.00 3.82
859 910 0.179059 ACCATTCACGTCAGCACACA 60.179 50.000 0.00 0.00 0.00 3.72
860 911 1.790755 TACCATTCACGTCAGCACAC 58.209 50.000 0.00 0.00 0.00 3.82
861 912 2.760634 ATACCATTCACGTCAGCACA 57.239 45.000 0.00 0.00 0.00 4.57
862 913 4.119862 ACATATACCATTCACGTCAGCAC 58.880 43.478 0.00 0.00 0.00 4.40
863 914 4.400529 ACATATACCATTCACGTCAGCA 57.599 40.909 0.00 0.00 0.00 4.41
864 915 5.734855 AAACATATACCATTCACGTCAGC 57.265 39.130 0.00 0.00 0.00 4.26
865 916 7.526608 ACAAAAACATATACCATTCACGTCAG 58.473 34.615 0.00 0.00 0.00 3.51
866 917 7.441890 ACAAAAACATATACCATTCACGTCA 57.558 32.000 0.00 0.00 0.00 4.35
867 918 8.736751 AAACAAAAACATATACCATTCACGTC 57.263 30.769 0.00 0.00 0.00 4.34
868 919 9.535878 AAAAACAAAAACATATACCATTCACGT 57.464 25.926 0.00 0.00 0.00 4.49
887 938 9.883142 ACTTGGTCTCAATTATTTGAAAAACAA 57.117 25.926 10.24 10.24 41.22 2.83
888 939 9.883142 AACTTGGTCTCAATTATTTGAAAAACA 57.117 25.926 2.00 0.30 41.22 2.83
902 953 9.868160 TCTAGATGAGATATAACTTGGTCTCAA 57.132 33.333 7.86 0.00 46.97 3.02
920 971 8.871125 GGGAGTACCTAAAATTCATCTAGATGA 58.129 37.037 27.93 27.93 40.12 2.92
944 995 2.703536 GGTGGCCCCATTTATAAAAGGG 59.296 50.000 25.46 25.46 44.53 3.95
945 996 2.364002 CGGTGGCCCCATTTATAAAAGG 59.636 50.000 11.74 11.74 0.00 3.11
946 997 3.292460 TCGGTGGCCCCATTTATAAAAG 58.708 45.455 0.00 0.00 0.00 2.27
947 998 3.053544 TCTCGGTGGCCCCATTTATAAAA 60.054 43.478 0.00 0.00 0.00 1.52
948 999 2.510382 TCTCGGTGGCCCCATTTATAAA 59.490 45.455 0.00 0.00 0.00 1.40
949 1000 2.128535 TCTCGGTGGCCCCATTTATAA 58.871 47.619 0.00 0.00 0.00 0.98
950 1001 1.809133 TCTCGGTGGCCCCATTTATA 58.191 50.000 0.00 0.00 0.00 0.98
951 1002 1.073923 GATCTCGGTGGCCCCATTTAT 59.926 52.381 0.00 0.00 0.00 1.40
952 1003 0.472471 GATCTCGGTGGCCCCATTTA 59.528 55.000 0.00 0.00 0.00 1.40
953 1004 1.227383 GATCTCGGTGGCCCCATTT 59.773 57.895 0.00 0.00 0.00 2.32
954 1005 2.757124 GGATCTCGGTGGCCCCATT 61.757 63.158 0.00 0.00 0.00 3.16
955 1006 3.171388 GGATCTCGGTGGCCCCAT 61.171 66.667 0.00 0.00 0.00 4.00
956 1007 4.731853 TGGATCTCGGTGGCCCCA 62.732 66.667 0.00 0.00 0.00 4.96
965 1016 7.824289 GGGATAGATAGATAGATCTGGATCTCG 59.176 44.444 15.31 0.00 44.37 4.04
986 1037 2.115480 CTCGAGGGAGGCGGGATA 59.885 66.667 3.91 0.00 36.61 2.59
1050 1134 4.700365 GGTCCCTGCAAAACGCGC 62.700 66.667 5.73 0.00 46.97 6.86
1118 1222 4.717313 GCCGCCGTCCCTTTTCCT 62.717 66.667 0.00 0.00 0.00 3.36
1170 1282 1.604185 CCCTCGAGCTATGCTACTTGC 60.604 57.143 6.99 0.00 39.88 4.01
1171 1283 1.000283 CCCCTCGAGCTATGCTACTTG 60.000 57.143 6.99 0.00 39.88 3.16
1172 1284 1.333177 CCCCTCGAGCTATGCTACTT 58.667 55.000 6.99 0.00 39.88 2.24
1173 1285 0.540830 CCCCCTCGAGCTATGCTACT 60.541 60.000 6.99 0.00 39.88 2.57
1174 1286 0.539901 TCCCCCTCGAGCTATGCTAC 60.540 60.000 6.99 0.00 39.88 3.58
1175 1287 0.539901 GTCCCCCTCGAGCTATGCTA 60.540 60.000 6.99 0.00 39.88 3.49
1176 1288 1.834822 GTCCCCCTCGAGCTATGCT 60.835 63.158 6.99 0.00 43.88 3.79
1177 1289 2.737830 GTCCCCCTCGAGCTATGC 59.262 66.667 6.99 0.00 0.00 3.14
1178 1290 2.565645 CCGTCCCCCTCGAGCTATG 61.566 68.421 6.99 0.00 0.00 2.23
1179 1291 2.203509 CCGTCCCCCTCGAGCTAT 60.204 66.667 6.99 0.00 0.00 2.97
1180 1292 2.905935 CTTCCGTCCCCCTCGAGCTA 62.906 65.000 6.99 0.00 0.00 3.32
1184 1296 4.772231 CCCTTCCGTCCCCCTCGA 62.772 72.222 0.00 0.00 0.00 4.04
1211 1323 2.747855 CGGCAGCACCTTCCCTTC 60.748 66.667 0.00 0.00 35.61 3.46
1212 1324 4.351054 CCGGCAGCACCTTCCCTT 62.351 66.667 0.00 0.00 35.61 3.95
1259 1395 4.329545 GGAGCTCGGTGGTGGCAA 62.330 66.667 7.83 0.00 0.00 4.52
1276 1412 1.595382 GCGACTCCATGAATCCCCG 60.595 63.158 0.00 0.00 0.00 5.73
1353 1500 3.254035 TTCTTCCTCCTCCCGCCCT 62.254 63.158 0.00 0.00 0.00 5.19
1354 1501 2.687566 TTCTTCCTCCTCCCGCCC 60.688 66.667 0.00 0.00 0.00 6.13
1355 1502 2.736826 CCTTCTTCCTCCTCCCGCC 61.737 68.421 0.00 0.00 0.00 6.13
1356 1503 2.736826 CCCTTCTTCCTCCTCCCGC 61.737 68.421 0.00 0.00 0.00 6.13
1357 1504 2.066999 CCCCTTCTTCCTCCTCCCG 61.067 68.421 0.00 0.00 0.00 5.14
1387 1534 1.067516 CAACTCAACCAAACCCAGCAG 59.932 52.381 0.00 0.00 0.00 4.24
1392 1539 0.310854 CGCTCAACTCAACCAAACCC 59.689 55.000 0.00 0.00 0.00 4.11
1402 1563 1.445238 AAGCTCGCTCGCTCAACTC 60.445 57.895 0.00 0.00 39.86 3.01
1403 1564 1.735920 CAAGCTCGCTCGCTCAACT 60.736 57.895 0.00 0.00 39.86 3.16
1404 1565 2.734673 CCAAGCTCGCTCGCTCAAC 61.735 63.158 0.00 0.00 39.86 3.18
1405 1566 2.433145 CCAAGCTCGCTCGCTCAA 60.433 61.111 0.00 0.00 39.86 3.02
1406 1567 3.633094 GACCAAGCTCGCTCGCTCA 62.633 63.158 0.00 0.00 39.86 4.26
1407 1568 2.883253 GACCAAGCTCGCTCGCTC 60.883 66.667 0.00 0.00 39.86 5.03
1408 1569 4.785512 CGACCAAGCTCGCTCGCT 62.786 66.667 0.00 0.00 43.31 4.93
1409 1570 4.778415 TCGACCAAGCTCGCTCGC 62.778 66.667 0.00 0.00 33.47 5.03
1410 1571 1.941734 GATCGACCAAGCTCGCTCG 60.942 63.158 0.00 0.00 33.47 5.03
1455 1616 4.072088 CGCGCGAACACCACCTTC 62.072 66.667 28.94 0.00 0.00 3.46
1667 1828 3.036429 ATGAAGGGCGAGGAGTGGC 62.036 63.158 0.00 0.00 0.00 5.01
2166 2333 2.352457 CGCGCGTAGTAGAGGCAG 60.352 66.667 24.19 0.00 38.95 4.85
2253 2420 1.225704 GGAGGCCTGGTCCATCTTG 59.774 63.158 12.00 0.00 33.84 3.02
2269 2436 4.687215 GCACTGCTGCTCCACGGA 62.687 66.667 0.00 0.00 40.63 4.69
2504 2671 0.809241 CGGAGAGCAATCAGTGAGCC 60.809 60.000 0.00 0.00 0.00 4.70
2511 2678 0.175531 TGCGAATCGGAGAGCAATCA 59.824 50.000 4.35 0.00 43.63 2.57
2767 2940 1.568606 GTTAATTCCGGCGAGACCTC 58.431 55.000 9.30 0.00 35.61 3.85
2769 2942 1.149964 CGGTTAATTCCGGCGAGACC 61.150 60.000 9.30 5.88 45.88 3.85
2780 2953 1.633945 AGGGGAAGAGCACGGTTAATT 59.366 47.619 0.00 0.00 0.00 1.40
2822 2995 4.357947 ATGCGCACGTCGTGGACT 62.358 61.111 25.70 5.41 41.07 3.85
3041 3217 0.392863 TCATGGGGATGTCGCTGTTG 60.393 55.000 0.00 0.00 0.00 3.33
3046 3222 0.466189 AATGGTCATGGGGATGTCGC 60.466 55.000 0.00 0.00 0.00 5.19
3047 3223 2.057137 AAATGGTCATGGGGATGTCG 57.943 50.000 0.00 0.00 0.00 4.35
3070 3251 3.429141 CTGCAGAGCAACAGCGGG 61.429 66.667 8.42 0.00 38.41 6.13
3200 3381 7.263496 TGAACATGAACAATCAACAAACATGA 58.737 30.769 0.00 0.00 39.49 3.07
3243 3424 0.997932 GAATCTCAGCTCAGCACACG 59.002 55.000 0.00 0.00 0.00 4.49
3420 3602 2.579738 GAGCGGGTCTTGAGGTCC 59.420 66.667 0.00 0.00 0.00 4.46
3570 3754 4.584638 TCTGTTGTGGCCAGGTAATAAT 57.415 40.909 5.11 0.00 0.00 1.28
3571 3755 4.269183 CATCTGTTGTGGCCAGGTAATAA 58.731 43.478 5.11 0.00 0.00 1.40
3572 3756 3.884895 CATCTGTTGTGGCCAGGTAATA 58.115 45.455 5.11 0.00 0.00 0.98
3613 3797 1.866601 TGTTGACACAAGATCAGCACG 59.133 47.619 0.00 0.00 33.03 5.34
3629 3813 0.901580 ATTGCCTTGCTCCCCTGTTG 60.902 55.000 0.00 0.00 0.00 3.33
3666 3850 0.321564 TGACCGCATTCTTGTGAGGG 60.322 55.000 1.94 0.00 42.57 4.30
3874 4058 1.399440 CGCTGCAGATTAGCACAACAT 59.601 47.619 20.43 0.00 41.18 2.71
3998 4182 3.936203 TTGCAACCGGTCGAGGCT 61.936 61.111 8.04 0.00 33.69 4.58
4059 4243 4.187810 GTGGTTAATGCCGCCGCC 62.188 66.667 0.00 0.00 33.14 6.13
4145 4329 4.128925 TGATAGAGATGGTGTCAAGCAC 57.871 45.455 0.00 0.00 46.97 4.40
4147 4331 5.121811 ACATTGATAGAGATGGTGTCAAGC 58.878 41.667 0.00 0.00 32.93 4.01
4148 4332 5.757320 GGACATTGATAGAGATGGTGTCAAG 59.243 44.000 0.00 0.00 36.97 3.02
4149 4333 5.396772 GGGACATTGATAGAGATGGTGTCAA 60.397 44.000 0.00 0.00 36.97 3.18
4150 4334 4.101585 GGGACATTGATAGAGATGGTGTCA 59.898 45.833 0.00 0.00 36.97 3.58
4151 4335 4.101585 TGGGACATTGATAGAGATGGTGTC 59.898 45.833 0.00 0.00 35.11 3.67
4331 4515 3.955471 TGGGCTGGTAAAAAGAGAGATG 58.045 45.455 0.00 0.00 0.00 2.90
4332 4516 4.228210 TGATGGGCTGGTAAAAAGAGAGAT 59.772 41.667 0.00 0.00 0.00 2.75
4333 4517 3.587061 TGATGGGCTGGTAAAAAGAGAGA 59.413 43.478 0.00 0.00 0.00 3.10
4362 4546 1.334869 GCATGATTTTACTGGGGAGCG 59.665 52.381 0.00 0.00 0.00 5.03
4383 4567 3.492337 TCCGGTAAGTGAAAAAGGCATT 58.508 40.909 0.00 0.00 0.00 3.56
4401 4585 3.873910 AGGTTAAGACACCATCATTCCG 58.126 45.455 0.00 0.00 39.62 4.30
4440 4640 1.212616 GCTGCTAGTATTCCTGCACG 58.787 55.000 0.00 0.00 0.00 5.34
4493 4696 2.627515 TGCTGCAACTTCTTCACTCT 57.372 45.000 0.00 0.00 0.00 3.24
4579 4783 1.642037 CTGAATCAGCTGGTGCGGTG 61.642 60.000 15.13 0.00 45.42 4.94
4581 4785 1.078918 TCTGAATCAGCTGGTGCGG 60.079 57.895 15.13 11.32 45.42 5.69
4582 4786 1.364626 GGTCTGAATCAGCTGGTGCG 61.365 60.000 15.13 1.92 45.42 5.34
4592 4796 1.066858 TCGCCTCTTGTGGTCTGAATC 60.067 52.381 0.00 0.00 0.00 2.52
4653 4858 6.348540 GCCCTAAGTATCTGACACTGTTTTTG 60.349 42.308 0.00 0.00 0.00 2.44
4723 4933 3.566322 AGTAGTAGCAGCAGGAGTAATCG 59.434 47.826 0.00 0.00 0.00 3.34
4744 4954 4.562143 GGTTGTTGGTGGTGGTACTACTAG 60.562 50.000 9.41 0.00 29.70 2.57
4747 4957 2.158784 TGGTTGTTGGTGGTGGTACTAC 60.159 50.000 0.00 0.00 0.00 2.73
4750 4960 1.026584 GTGGTTGTTGGTGGTGGTAC 58.973 55.000 0.00 0.00 0.00 3.34
4753 4963 0.972983 TTGGTGGTTGTTGGTGGTGG 60.973 55.000 0.00 0.00 0.00 4.61
4754 4964 1.118838 ATTGGTGGTTGTTGGTGGTG 58.881 50.000 0.00 0.00 0.00 4.17
4762 4973 2.289819 CGGTGGTAGTATTGGTGGTTGT 60.290 50.000 0.00 0.00 0.00 3.32
4767 4978 0.250793 TGGCGGTGGTAGTATTGGTG 59.749 55.000 0.00 0.00 0.00 4.17
5159 5435 4.175337 ACCATGATCCACGGCCGG 62.175 66.667 31.76 18.27 0.00 6.13
5160 5436 2.588877 GACCATGATCCACGGCCG 60.589 66.667 26.86 26.86 0.00 6.13
5223 5518 4.041075 AGGACAAAGGAGAAGGAGAAAGTC 59.959 45.833 0.00 0.00 0.00 3.01
5238 5534 5.675575 GCATTGTAGATTCAGCAGGACAAAG 60.676 44.000 0.00 0.00 31.19 2.77
5248 5544 5.352284 ACCGAACTAGCATTGTAGATTCAG 58.648 41.667 0.00 0.00 0.00 3.02
5410 5721 0.857311 CGCATTCGCATCCGTTTCAC 60.857 55.000 0.00 0.00 38.40 3.18
5469 5780 4.237349 TCACCTTTTCTTTTCAATCGCC 57.763 40.909 0.00 0.00 0.00 5.54
5473 5784 4.559153 CGGCATCACCTTTTCTTTTCAAT 58.441 39.130 0.00 0.00 35.61 2.57
5522 5834 7.148086 GCGGTCTAATCTGATCTAATCTCATCT 60.148 40.741 0.00 0.00 0.00 2.90
5536 5853 0.811616 GCCACCAGCGGTCTAATCTG 60.812 60.000 0.00 0.00 31.02 2.90
5604 5924 1.208844 TCCTCCTCCGTCTCTCCACT 61.209 60.000 0.00 0.00 0.00 4.00
5616 5950 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
5617 5951 1.087725 TCCTCCTCCTCCTCCTCCT 59.912 63.158 0.00 0.00 0.00 3.69
5635 5969 2.349755 CATCCCGTCCCCAAACGT 59.650 61.111 0.00 0.00 41.01 3.99
5636 5970 2.437716 CCATCCCGTCCCCAAACG 60.438 66.667 0.00 0.00 42.24 3.60
5637 5971 1.677633 CACCATCCCGTCCCCAAAC 60.678 63.158 0.00 0.00 0.00 2.93
5702 6052 2.190578 CAGCCTCCAATCCGACCC 59.809 66.667 0.00 0.00 0.00 4.46
5755 6106 6.992715 CCTAATCACCCGTCATTAGAAAAGAT 59.007 38.462 0.53 0.00 35.41 2.40
5756 6107 6.346096 CCTAATCACCCGTCATTAGAAAAGA 58.654 40.000 0.53 0.00 35.41 2.52
5812 6163 3.072476 TGATTAGGAGCTTTAATCCCGGG 59.928 47.826 16.85 16.85 36.93 5.73
5840 6191 2.029244 CGTCATCATAACGGCAACTGTC 59.971 50.000 0.00 0.00 36.51 3.51
5842 6193 1.267532 GCGTCATCATAACGGCAACTG 60.268 52.381 0.00 0.00 40.41 3.16
5907 6261 7.805083 AGACATTCATAGCCATAATAGACCT 57.195 36.000 0.00 0.00 0.00 3.85
5915 6269 5.683681 TGCTTGAAGACATTCATAGCCATA 58.316 37.500 15.75 3.31 44.75 2.74
5917 6271 3.954200 TGCTTGAAGACATTCATAGCCA 58.046 40.909 15.75 7.36 44.75 4.75
5918 6272 4.970662 TTGCTTGAAGACATTCATAGCC 57.029 40.909 15.75 5.81 44.75 3.93
5919 6273 7.672738 CATTTTTGCTTGAAGACATTCATAGC 58.327 34.615 0.00 13.44 44.75 2.97
5920 6274 7.201496 GGCATTTTTGCTTGAAGACATTCATAG 60.201 37.037 0.00 0.00 44.75 2.23
5921 6275 6.591062 GGCATTTTTGCTTGAAGACATTCATA 59.409 34.615 0.00 0.00 44.75 2.15
5923 6277 4.751098 GGCATTTTTGCTTGAAGACATTCA 59.249 37.500 0.00 0.00 43.72 2.57
5924 6278 4.143263 CGGCATTTTTGCTTGAAGACATTC 60.143 41.667 0.00 0.00 33.94 2.67
5925 6279 3.742369 CGGCATTTTTGCTTGAAGACATT 59.258 39.130 0.00 0.00 34.73 2.71
5926 6280 3.319755 CGGCATTTTTGCTTGAAGACAT 58.680 40.909 0.00 0.00 34.73 3.06
5932 6286 1.372748 CCGCGGCATTTTTGCTTGA 60.373 52.632 14.67 0.00 34.73 3.02
5945 6299 1.238625 TGTTTTTAGAAGCCCCGCGG 61.239 55.000 21.04 21.04 0.00 6.46
5948 6302 2.779506 AGACTGTTTTTAGAAGCCCCG 58.220 47.619 0.00 0.00 0.00 5.73
5953 6307 7.475840 AGACTTTGCAAGACTGTTTTTAGAAG 58.524 34.615 0.00 0.00 32.40 2.85
5957 6311 5.220777 CGGAGACTTTGCAAGACTGTTTTTA 60.221 40.000 0.00 0.00 33.75 1.52
5965 6319 1.527311 GACACGGAGACTTTGCAAGAC 59.473 52.381 0.00 0.00 0.00 3.01
5972 6326 0.471211 TCCCAGGACACGGAGACTTT 60.471 55.000 0.00 0.00 0.00 2.66
5983 6337 3.353557 GGACCTACAAAATTCCCAGGAC 58.646 50.000 0.00 0.00 0.00 3.85
5984 6338 2.310647 GGGACCTACAAAATTCCCAGGA 59.689 50.000 0.37 0.00 46.35 3.86
5992 6346 3.763897 GCATCAACTGGGACCTACAAAAT 59.236 43.478 0.00 0.00 0.00 1.82
5996 6350 1.656587 AGCATCAACTGGGACCTACA 58.343 50.000 0.00 0.00 0.00 2.74
5997 6351 5.337652 GGATATAGCATCAACTGGGACCTAC 60.338 48.000 0.00 0.00 0.00 3.18
5998 6352 4.777896 GGATATAGCATCAACTGGGACCTA 59.222 45.833 0.00 0.00 0.00 3.08
6000 6354 3.327757 TGGATATAGCATCAACTGGGACC 59.672 47.826 0.00 0.00 0.00 4.46
6004 6358 6.046290 TCTCATGGATATAGCATCAACTGG 57.954 41.667 0.00 0.00 0.00 4.00
6032 6386 5.127491 AGAATTTTTGTACGGACCTCAACA 58.873 37.500 0.00 0.00 0.00 3.33
6068 6422 9.979578 ACATAACATGCAAGAGAAAAATAAACA 57.020 25.926 0.00 0.00 0.00 2.83
6073 6427 7.889469 AGTGACATAACATGCAAGAGAAAAAT 58.111 30.769 0.00 0.00 0.00 1.82
6076 6430 5.120674 CGAGTGACATAACATGCAAGAGAAA 59.879 40.000 0.00 0.00 0.00 2.52
6108 6462 9.282247 GTATCAGTCGACGAAGATTTAACTAAA 57.718 33.333 20.61 3.97 0.00 1.85
6112 6466 6.264088 AGGTATCAGTCGACGAAGATTTAAC 58.736 40.000 20.61 14.67 0.00 2.01
6120 6474 3.127548 GTGGTTAGGTATCAGTCGACGAA 59.872 47.826 10.46 2.31 0.00 3.85
6121 6475 2.679837 GTGGTTAGGTATCAGTCGACGA 59.320 50.000 10.46 11.04 0.00 4.20
6122 6476 2.421073 TGTGGTTAGGTATCAGTCGACG 59.579 50.000 10.46 5.48 0.00 5.12
6128 6482 5.359194 AGAATGGTGTGGTTAGGTATCAG 57.641 43.478 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.