Multiple sequence alignment - TraesCS2A01G102100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G102100 chr2A 100.000 5869 0 0 1 5869 55178095 55172227 0.000000e+00 10839.0
1 TraesCS2A01G102100 chr2B 93.000 4086 195 39 4 4029 85326042 85321988 0.000000e+00 5877.0
2 TraesCS2A01G102100 chr2B 93.995 1482 62 15 4026 5484 85321898 85320421 0.000000e+00 2218.0
3 TraesCS2A01G102100 chr2D 93.167 3966 151 40 136 4029 54678247 54674330 0.000000e+00 5712.0
4 TraesCS2A01G102100 chr2D 93.502 1262 60 12 4026 5279 54674236 54672989 0.000000e+00 1857.0
5 TraesCS2A01G102100 chr2D 83.951 405 61 2 2281 2682 481505127 481504724 9.230000e-103 385.0
6 TraesCS2A01G102100 chr2D 93.000 100 7 0 1 100 54678341 54678242 4.740000e-31 147.0
7 TraesCS2A01G102100 chrUn 84.236 406 60 2 2281 2682 29397061 29396656 5.510000e-105 392.0
8 TraesCS2A01G102100 chrUn 84.236 406 59 3 2281 2682 341056012 341056416 1.980000e-104 390.0
9 TraesCS2A01G102100 chrUn 84.236 406 59 3 2281 2682 370094342 370093938 1.980000e-104 390.0
10 TraesCS2A01G102100 chr5D 84.236 406 57 5 2281 2682 72440510 72440912 7.130000e-104 388.0
11 TraesCS2A01G102100 chr6D 84.029 407 58 4 2281 2682 18220986 18221390 9.230000e-103 385.0
12 TraesCS2A01G102100 chr6D 87.500 56 3 2 2067 2120 91441628 91441575 1.770000e-05 62.1
13 TraesCS2A01G102100 chr3D 83.990 406 60 3 2281 2682 68961581 68961177 9.230000e-103 385.0
14 TraesCS2A01G102100 chr3D 87.500 56 3 3 2067 2120 57685230 57685177 1.770000e-05 62.1
15 TraesCS2A01G102100 chr4B 91.964 112 8 1 2160 2270 371986511 371986400 7.870000e-34 156.0
16 TraesCS2A01G102100 chr4B 83.333 66 7 3 2064 2127 195999420 195999357 2.280000e-04 58.4
17 TraesCS2A01G102100 chr4D 87.500 56 3 3 2067 2120 366085288 366085235 1.770000e-05 62.1
18 TraesCS2A01G102100 chr3B 86.667 60 2 5 2064 2120 229931830 229931774 1.770000e-05 62.1
19 TraesCS2A01G102100 chr1D 87.500 56 3 3 2067 2120 203612591 203612644 1.770000e-05 62.1
20 TraesCS2A01G102100 chr1A 87.500 56 3 3 2067 2120 226418295 226418242 1.770000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G102100 chr2A 55172227 55178095 5868 True 10839.0 10839 100.0000 1 5869 1 chr2A.!!$R1 5868
1 TraesCS2A01G102100 chr2B 85320421 85326042 5621 True 4047.5 5877 93.4975 4 5484 2 chr2B.!!$R1 5480
2 TraesCS2A01G102100 chr2D 54672989 54678341 5352 True 2572.0 5712 93.2230 1 5279 3 chr2D.!!$R2 5278

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
294 297 0.821517 TGTACTGCCGTGACTATGGG 59.178 55.0 0.00 0.00 33.30 4.00 F
1260 1286 0.888619 TCCACGTCTTCTGCTTCGAT 59.111 50.0 0.00 0.00 0.00 3.59 F
1390 1416 0.624254 AATTCCGTTCCCCTTCCTCC 59.376 55.0 0.00 0.00 0.00 4.30 F
1540 1566 0.765510 AGAGTTGGGGTGAGTGGTTC 59.234 55.0 0.00 0.00 0.00 3.62 F
2578 2644 0.802994 ACGCATGCATGGCAAAATCG 60.803 50.0 27.34 20.95 43.62 3.34 F
3559 3656 0.037590 TTGTGCTCTGCGGGGTAATT 59.962 50.0 0.00 0.00 0.00 1.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1327 1353 1.064296 CCAGATCCGACGGACGAAG 59.936 63.158 21.02 9.49 45.77 3.79 R
2621 2687 0.030638 CAACGGTGGAAAGTTGGCAG 59.969 55.000 0.00 0.00 42.72 4.85 R
3153 3229 3.074412 AGCAGAGGGTTCACAAATTACG 58.926 45.455 0.00 0.00 0.00 3.18 R
3502 3583 1.812922 CAGCTCAGACCGATGGCAC 60.813 63.158 0.00 0.00 0.00 5.01 R
3819 3927 2.280308 TGGGCTGGGAACTAACCTAT 57.720 50.000 0.00 0.00 0.00 2.57 R
5487 5722 0.034767 TGGGAGATGCTTTGCCAGAG 60.035 55.000 0.00 0.00 31.88 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 2.103094 GCATCCATGTGTCTACAGGCTA 59.897 50.000 0.00 0.00 40.79 3.93
69 70 3.244353 GCATCCATGTGTCTACAGGCTAT 60.244 47.826 0.00 0.00 40.79 2.97
73 74 7.418368 GCATCCATGTGTCTACAGGCTATATAT 60.418 40.741 0.00 0.00 40.79 0.86
76 77 8.531982 TCCATGTGTCTACAGGCTATATATTTC 58.468 37.037 0.00 0.00 40.79 2.17
100 101 3.989167 GAGCTTCTCTTCATCGATGATGG 59.011 47.826 30.19 23.86 40.15 3.51
104 105 3.461061 TCTCTTCATCGATGATGGTTGC 58.539 45.455 30.19 0.00 40.15 4.17
116 117 1.859427 ATGGTTGCTCTGTTGCGCTG 61.859 55.000 9.73 0.00 35.36 5.18
122 123 4.680237 TCTGTTGCGCTGGTCCCG 62.680 66.667 9.73 0.00 0.00 5.14
143 144 3.458189 GGGAGGTCTTAACATGATGACG 58.542 50.000 0.00 0.00 0.00 4.35
155 156 2.438868 TGATGACGTCCTCACTGTTG 57.561 50.000 18.12 0.00 0.00 3.33
181 182 1.338674 ACAAGATTTGTCCGGCATCGA 60.339 47.619 0.00 0.00 40.56 3.59
188 189 1.004918 GTCCGGCATCGATAAGGGG 60.005 63.158 0.00 0.00 39.00 4.79
195 196 1.868519 GCATCGATAAGGGGTGACGAC 60.869 57.143 0.00 0.00 35.91 4.34
206 207 3.601685 TGACGACGGCAGCACTCA 61.602 61.111 0.00 0.00 0.00 3.41
214 215 1.001974 ACGGCAGCACTCATTTGACTA 59.998 47.619 0.00 0.00 0.00 2.59
294 297 0.821517 TGTACTGCCGTGACTATGGG 59.178 55.000 0.00 0.00 33.30 4.00
346 354 5.803020 AAGTTTAACTGGATCGCTGAATC 57.197 39.130 0.00 0.00 0.00 2.52
359 367 1.675714 GCTGAATCCATCACCACGTCA 60.676 52.381 0.00 0.00 33.47 4.35
569 582 3.731766 AACCCGCACAAGCAACCCT 62.732 57.895 0.00 0.00 42.27 4.34
771 790 2.589442 GTCAAACCCACCGACGCA 60.589 61.111 0.00 0.00 0.00 5.24
835 854 3.610669 CCTCCATCCCTCGCCTCG 61.611 72.222 0.00 0.00 0.00 4.63
836 855 4.292178 CTCCATCCCTCGCCTCGC 62.292 72.222 0.00 0.00 0.00 5.03
1260 1286 0.888619 TCCACGTCTTCTGCTTCGAT 59.111 50.000 0.00 0.00 0.00 3.59
1317 1343 2.093106 GAGCTCTTCGTCCAGGTAAGA 58.907 52.381 6.43 0.00 0.00 2.10
1327 1353 1.595357 CAGGTAAGACGACCACCCC 59.405 63.158 0.00 0.00 42.47 4.95
1335 1361 4.430765 CGACCACCCCTTCGTCCG 62.431 72.222 0.00 0.00 0.00 4.79
1353 1379 0.747255 CGTCGGATCTGGATCTGGTT 59.253 55.000 16.48 0.00 42.90 3.67
1388 1414 1.282157 CTGAATTCCGTTCCCCTTCCT 59.718 52.381 2.27 0.00 35.91 3.36
1389 1415 1.280998 TGAATTCCGTTCCCCTTCCTC 59.719 52.381 2.27 0.00 35.91 3.71
1390 1416 0.624254 AATTCCGTTCCCCTTCCTCC 59.376 55.000 0.00 0.00 0.00 4.30
1487 1513 3.160269 CATTGAGAAGGCCAAGGAAGTT 58.840 45.455 5.01 0.00 0.00 2.66
1540 1566 0.765510 AGAGTTGGGGTGAGTGGTTC 59.234 55.000 0.00 0.00 0.00 3.62
1542 1568 2.112297 TTGGGGTGAGTGGTTCGC 59.888 61.111 0.00 0.00 35.52 4.70
1586 1612 3.496884 TCGGTGCTTGTTGATGTTCTTAC 59.503 43.478 0.00 0.00 0.00 2.34
1598 1624 4.994852 TGATGTTCTTACCTTCCTTGTTCG 59.005 41.667 0.00 0.00 0.00 3.95
1653 1679 4.195416 GAGCAGGAAAATCCGAAGAGATT 58.805 43.478 0.00 0.00 42.75 2.40
1858 1909 7.178712 TCTTCTTCGTGAAAAGAGTTCATTC 57.821 36.000 0.00 0.00 36.66 2.67
1980 2031 8.897752 GTTTCATGTTATTCTAAGGCTCTTGAT 58.102 33.333 0.00 0.00 0.00 2.57
2130 2186 9.414295 CATAACCAAAGTATGATTGCATATTGG 57.586 33.333 13.01 13.01 44.88 3.16
2290 2348 9.458374 TGTACAAGAAGTAAATAAAGCAAAAGC 57.542 29.630 0.00 0.00 33.72 3.51
2315 2373 5.831702 ATGTCAATTCTTTCAGAGCCATC 57.168 39.130 0.00 0.00 0.00 3.51
2329 2387 4.454847 CAGAGCCATCTTACATTGCTATGG 59.545 45.833 12.77 0.00 37.56 2.74
2339 2397 4.073293 ACATTGCTATGGTACTGTAGCC 57.927 45.455 19.98 6.96 40.59 3.93
2394 2457 8.574251 AAGTGATAAGGTTTGTGCACATTATA 57.426 30.769 22.39 10.20 34.56 0.98
2578 2644 0.802994 ACGCATGCATGGCAAAATCG 60.803 50.000 27.34 20.95 43.62 3.34
2616 2682 0.896923 TCCAATGGCCAACAATGCTC 59.103 50.000 10.96 0.00 0.00 4.26
2619 2685 1.606885 AATGGCCAACAATGCTCGGG 61.607 55.000 10.96 0.00 0.00 5.14
2620 2686 4.133796 GGCCAACAATGCTCGGGC 62.134 66.667 0.00 0.00 43.86 6.13
2621 2687 4.133796 GCCAACAATGCTCGGGCC 62.134 66.667 3.94 0.00 38.70 5.80
2671 2737 6.684613 GCTTCATCCAACAGCCAATATTCAAT 60.685 38.462 0.00 0.00 0.00 2.57
2775 2850 3.811083 CCTAGTAGAGGTCAGATCGTGT 58.189 50.000 0.00 0.00 40.98 4.49
3070 3146 3.568430 AGCTTTTCCTTAAAGGGACAACG 59.432 43.478 0.00 0.00 42.89 4.10
3100 3176 8.906867 CATCTTTATGTCCACAGGTTGATATTT 58.093 33.333 0.00 0.00 0.00 1.40
3139 3215 1.271379 TGCTGTTCCTCCTGTTTAGCC 60.271 52.381 0.00 0.00 0.00 3.93
3153 3229 5.007724 CCTGTTTAGCCGAATTATTGTCCTC 59.992 44.000 0.00 0.00 0.00 3.71
3253 3329 2.084546 GTGGTACTGTCCTGCAAATCC 58.915 52.381 0.00 0.00 0.00 3.01
3355 3434 5.989168 TCACCGCAATACATTAATGACCTAG 59.011 40.000 22.16 8.50 0.00 3.02
3392 3473 7.630242 TGGGAGTGAGAAATTTCATGATAAC 57.370 36.000 19.99 8.42 0.00 1.89
3502 3583 5.796935 GCAACTGCATTGTAGACAAACATAG 59.203 40.000 8.86 0.00 40.77 2.23
3517 3614 1.410517 ACATAGTGCCATCGGTCTGAG 59.589 52.381 0.00 0.00 0.00 3.35
3559 3656 0.037590 TTGTGCTCTGCGGGGTAATT 59.962 50.000 0.00 0.00 0.00 1.40
3610 3707 5.687285 TGACATCACATGATTATTCTCGTCG 59.313 40.000 0.00 0.00 31.21 5.12
3850 3958 1.457346 CCAGCCCATTCAGTGAAGTC 58.543 55.000 11.91 0.63 0.00 3.01
4076 4283 1.472480 GCCAATACAAACCACGAGCAT 59.528 47.619 0.00 0.00 0.00 3.79
4089 4296 5.798132 ACCACGAGCATATTATGACATGAT 58.202 37.500 7.87 0.00 0.00 2.45
4360 4570 1.039856 TTTTCTTTGACAGGGCTGCC 58.960 50.000 11.05 11.05 0.00 4.85
4403 4613 3.449018 TGATTCTAGCACTGTCCTCCTTC 59.551 47.826 0.00 0.00 0.00 3.46
4437 4647 5.751243 TTCACTTGTTTGCTACTCTTTCC 57.249 39.130 0.00 0.00 0.00 3.13
4634 4844 5.068067 TCCATACATTTGCATGGATCTTGTG 59.932 40.000 8.19 0.00 44.55 3.33
4682 4892 4.162509 GGATTTGGTAAGAGGCTCAGTACT 59.837 45.833 18.26 2.81 0.00 2.73
4687 4897 6.070951 TGGTAAGAGGCTCAGTACTAAGTA 57.929 41.667 18.26 2.63 0.00 2.24
4711 4921 6.757897 AAAAATGTCCATCATCGTGTACAT 57.242 33.333 0.00 0.00 35.48 2.29
4717 4927 7.519032 TGTCCATCATCGTGTACATCTATTA 57.481 36.000 0.00 0.00 0.00 0.98
4875 5085 2.882761 GCATCTTCATCATAGGCAGCAA 59.117 45.455 0.00 0.00 0.00 3.91
4887 5097 0.962356 GGCAGCAACCAGTGTAGCAT 60.962 55.000 0.00 0.00 32.73 3.79
4918 5128 2.276409 GTGGGAGCATGGGCATGA 59.724 61.111 0.00 0.00 44.61 3.07
4949 5159 3.903530 AGAAGTTTTGGATTCAGGGGT 57.096 42.857 0.00 0.00 0.00 4.95
4950 5160 3.767711 AGAAGTTTTGGATTCAGGGGTC 58.232 45.455 0.00 0.00 0.00 4.46
4970 5182 3.617263 GTCTACATTTAGCCGGTTCTGTG 59.383 47.826 1.90 0.00 0.00 3.66
5001 5214 2.226437 CCCTGAAGTCACCATTTTGTCG 59.774 50.000 0.00 0.00 0.00 4.35
5202 5419 6.092748 GGGCATAAACACATTGTTCACTTAG 58.907 40.000 0.00 0.00 40.14 2.18
5205 5422 2.969443 ACACATTGTTCACTTAGCGC 57.031 45.000 0.00 0.00 0.00 5.92
5239 5456 8.325421 TGTTCGTTGCCATATTTTAAACTCTA 57.675 30.769 0.00 0.00 0.00 2.43
5292 5514 2.102252 GGCCTCAGAACTCGAGATCATT 59.898 50.000 21.68 1.88 31.84 2.57
5303 5538 3.653344 TCGAGATCATTCAATTAGGCCG 58.347 45.455 0.00 0.00 0.00 6.13
5306 5541 2.162681 GATCATTCAATTAGGCCGGGG 58.837 52.381 2.18 0.00 0.00 5.73
5325 5560 3.660571 CCATGGACACCTGCCCCA 61.661 66.667 5.56 0.00 0.00 4.96
5373 5608 1.944676 CCGACGCCTACAAGATCGC 60.945 63.158 0.00 0.00 0.00 4.58
5410 5645 2.125147 CGATCCGGAGCCAAGCAA 60.125 61.111 15.35 0.00 0.00 3.91
5422 5657 1.710013 CCAAGCAATACGACGTCTGT 58.290 50.000 14.70 15.08 0.00 3.41
5428 5663 3.064545 AGCAATACGACGTCTGTACCTAC 59.935 47.826 14.70 8.26 0.00 3.18
5434 5669 1.663135 GACGTCTGTACCTACGACTCC 59.337 57.143 20.05 6.14 41.55 3.85
5439 5674 3.204827 TACCTACGACTCCGGCGC 61.205 66.667 0.00 0.00 40.78 6.53
5475 5710 2.824489 GCCTACTGCCTTTCCGCC 60.824 66.667 0.00 0.00 0.00 6.13
5496 5731 2.669569 GCAGGACGCTCTGGCAAA 60.670 61.111 7.56 0.00 38.60 3.68
5497 5732 2.684843 GCAGGACGCTCTGGCAAAG 61.685 63.158 7.56 0.00 38.60 2.77
5498 5733 2.359230 AGGACGCTCTGGCAAAGC 60.359 61.111 1.80 1.80 38.60 3.51
5499 5734 2.669569 GGACGCTCTGGCAAAGCA 60.670 61.111 14.03 0.00 39.81 3.91
5500 5735 2.042831 GGACGCTCTGGCAAAGCAT 61.043 57.895 14.03 0.00 39.81 3.79
5501 5736 1.427020 GACGCTCTGGCAAAGCATC 59.573 57.895 14.03 2.79 39.81 3.91
5502 5737 1.002868 ACGCTCTGGCAAAGCATCT 60.003 52.632 14.03 0.00 39.81 2.90
5503 5738 1.023513 ACGCTCTGGCAAAGCATCTC 61.024 55.000 14.03 0.00 39.81 2.75
5504 5739 1.712977 CGCTCTGGCAAAGCATCTCC 61.713 60.000 14.03 0.00 39.81 3.71
5505 5740 1.382692 GCTCTGGCAAAGCATCTCCC 61.383 60.000 8.18 0.00 39.61 4.30
5506 5741 0.034767 CTCTGGCAAAGCATCTCCCA 60.035 55.000 0.00 0.00 0.00 4.37
5507 5742 0.405198 TCTGGCAAAGCATCTCCCAA 59.595 50.000 0.00 0.00 0.00 4.12
5508 5743 1.203038 TCTGGCAAAGCATCTCCCAAA 60.203 47.619 0.00 0.00 0.00 3.28
5509 5744 1.203994 CTGGCAAAGCATCTCCCAAAG 59.796 52.381 0.00 0.00 0.00 2.77
5510 5745 0.533951 GGCAAAGCATCTCCCAAAGG 59.466 55.000 0.00 0.00 0.00 3.11
5511 5746 1.549203 GCAAAGCATCTCCCAAAGGA 58.451 50.000 0.00 0.00 41.08 3.36
5512 5747 2.105766 GCAAAGCATCTCCCAAAGGAT 58.894 47.619 0.00 0.00 42.93 3.24
5513 5748 2.159142 GCAAAGCATCTCCCAAAGGATG 60.159 50.000 0.00 0.00 42.93 3.51
5514 5749 3.094572 CAAAGCATCTCCCAAAGGATGT 58.905 45.455 0.00 0.00 42.93 3.06
5515 5750 3.463048 AAGCATCTCCCAAAGGATGTT 57.537 42.857 0.00 0.00 42.93 2.71
5516 5751 3.010200 AGCATCTCCCAAAGGATGTTC 57.990 47.619 0.00 0.00 42.93 3.18
5517 5752 2.579860 AGCATCTCCCAAAGGATGTTCT 59.420 45.455 0.00 0.00 42.93 3.01
5518 5753 2.948315 GCATCTCCCAAAGGATGTTCTC 59.052 50.000 0.00 0.00 42.93 2.87
5519 5754 3.371380 GCATCTCCCAAAGGATGTTCTCT 60.371 47.826 0.00 0.00 42.93 3.10
5520 5755 4.141620 GCATCTCCCAAAGGATGTTCTCTA 60.142 45.833 0.00 0.00 42.93 2.43
5521 5756 5.363939 CATCTCCCAAAGGATGTTCTCTAC 58.636 45.833 0.00 0.00 42.93 2.59
5522 5757 3.775316 TCTCCCAAAGGATGTTCTCTACC 59.225 47.826 0.00 0.00 42.93 3.18
5523 5758 3.777522 CTCCCAAAGGATGTTCTCTACCT 59.222 47.826 0.00 0.00 42.93 3.08
5524 5759 3.519510 TCCCAAAGGATGTTCTCTACCTG 59.480 47.826 0.00 0.00 37.19 4.00
5525 5760 3.519510 CCCAAAGGATGTTCTCTACCTGA 59.480 47.826 0.00 0.00 33.47 3.86
5526 5761 4.164988 CCCAAAGGATGTTCTCTACCTGAT 59.835 45.833 0.00 0.00 33.47 2.90
5527 5762 5.121811 CCAAAGGATGTTCTCTACCTGATG 58.878 45.833 0.00 0.00 32.73 3.07
5528 5763 5.104776 CCAAAGGATGTTCTCTACCTGATGA 60.105 44.000 0.00 0.00 32.73 2.92
5529 5764 5.606348 AAGGATGTTCTCTACCTGATGAC 57.394 43.478 0.00 0.00 32.73 3.06
5530 5765 3.634448 AGGATGTTCTCTACCTGATGACG 59.366 47.826 0.00 0.00 0.00 4.35
5531 5766 3.632604 GGATGTTCTCTACCTGATGACGA 59.367 47.826 0.00 0.00 0.00 4.20
5532 5767 4.098044 GGATGTTCTCTACCTGATGACGAA 59.902 45.833 0.00 0.00 0.00 3.85
5533 5768 5.221342 GGATGTTCTCTACCTGATGACGAAT 60.221 44.000 0.00 0.00 0.00 3.34
5534 5769 4.998788 TGTTCTCTACCTGATGACGAATG 58.001 43.478 0.00 0.00 0.00 2.67
5535 5770 3.717400 TCTCTACCTGATGACGAATGC 57.283 47.619 0.00 0.00 0.00 3.56
5536 5771 2.362397 TCTCTACCTGATGACGAATGCC 59.638 50.000 0.00 0.00 0.00 4.40
5537 5772 1.067060 TCTACCTGATGACGAATGCCG 59.933 52.381 0.00 0.00 45.44 5.69
5538 5773 0.104120 TACCTGATGACGAATGCCGG 59.896 55.000 0.00 0.00 43.93 6.13
5556 5791 3.968568 CCCACACGACGACCACGA 61.969 66.667 0.00 0.00 42.66 4.35
5557 5792 2.428569 CCACACGACGACCACGAG 60.429 66.667 0.00 0.00 42.66 4.18
5558 5793 2.330393 CACACGACGACCACGAGT 59.670 61.111 0.00 0.00 42.66 4.18
5559 5794 1.724929 CACACGACGACCACGAGTC 60.725 63.158 0.00 0.00 42.66 3.36
5570 5805 3.223226 ACGAGTCGTGGGTGGTTT 58.777 55.556 19.16 0.00 39.18 3.27
5571 5806 1.068585 ACGAGTCGTGGGTGGTTTC 59.931 57.895 19.16 0.00 39.18 2.78
5572 5807 2.019951 CGAGTCGTGGGTGGTTTCG 61.020 63.158 3.82 0.00 0.00 3.46
5573 5808 1.364901 GAGTCGTGGGTGGTTTCGA 59.635 57.895 0.00 0.00 0.00 3.71
5574 5809 0.037605 GAGTCGTGGGTGGTTTCGAT 60.038 55.000 0.00 0.00 34.93 3.59
5575 5810 0.037605 AGTCGTGGGTGGTTTCGATC 60.038 55.000 0.00 0.00 34.93 3.69
5576 5811 1.080366 TCGTGGGTGGTTTCGATCG 60.080 57.895 9.36 9.36 0.00 3.69
5577 5812 1.080366 CGTGGGTGGTTTCGATCGA 60.080 57.895 15.15 15.15 0.00 3.59
5578 5813 1.349259 CGTGGGTGGTTTCGATCGAC 61.349 60.000 19.26 7.95 0.00 4.20
5579 5814 0.320073 GTGGGTGGTTTCGATCGACA 60.320 55.000 19.26 8.97 0.00 4.35
5580 5815 0.611200 TGGGTGGTTTCGATCGACAT 59.389 50.000 19.26 0.00 0.00 3.06
5581 5816 1.006832 GGGTGGTTTCGATCGACATG 58.993 55.000 19.26 0.00 0.00 3.21
5582 5817 1.404986 GGGTGGTTTCGATCGACATGA 60.405 52.381 19.26 0.00 0.00 3.07
5583 5818 1.927174 GGTGGTTTCGATCGACATGAG 59.073 52.381 19.26 0.00 0.00 2.90
5584 5819 1.927174 GTGGTTTCGATCGACATGAGG 59.073 52.381 19.26 0.00 0.00 3.86
5585 5820 1.822371 TGGTTTCGATCGACATGAGGA 59.178 47.619 19.26 0.00 0.00 3.71
5586 5821 2.232696 TGGTTTCGATCGACATGAGGAA 59.767 45.455 19.26 4.54 0.00 3.36
5587 5822 2.860735 GGTTTCGATCGACATGAGGAAG 59.139 50.000 19.26 0.00 0.00 3.46
5588 5823 3.428999 GGTTTCGATCGACATGAGGAAGA 60.429 47.826 19.26 0.00 0.00 2.87
5589 5824 4.174009 GTTTCGATCGACATGAGGAAGAA 58.826 43.478 19.26 2.10 0.00 2.52
5590 5825 3.699779 TCGATCGACATGAGGAAGAAG 57.300 47.619 15.15 0.00 0.00 2.85
5591 5826 3.279434 TCGATCGACATGAGGAAGAAGA 58.721 45.455 15.15 0.00 0.00 2.87
5592 5827 3.065510 TCGATCGACATGAGGAAGAAGAC 59.934 47.826 15.15 0.00 0.00 3.01
5593 5828 2.921634 TCGACATGAGGAAGAAGACG 57.078 50.000 0.00 0.00 0.00 4.18
5594 5829 1.472878 TCGACATGAGGAAGAAGACGG 59.527 52.381 0.00 0.00 0.00 4.79
5595 5830 1.202582 CGACATGAGGAAGAAGACGGT 59.797 52.381 0.00 0.00 0.00 4.83
5596 5831 2.611518 GACATGAGGAAGAAGACGGTG 58.388 52.381 0.00 0.00 0.00 4.94
5597 5832 1.276421 ACATGAGGAAGAAGACGGTGG 59.724 52.381 0.00 0.00 0.00 4.61
5598 5833 1.550524 CATGAGGAAGAAGACGGTGGA 59.449 52.381 0.00 0.00 0.00 4.02
5599 5834 1.257743 TGAGGAAGAAGACGGTGGAG 58.742 55.000 0.00 0.00 0.00 3.86
5600 5835 0.108567 GAGGAAGAAGACGGTGGAGC 60.109 60.000 0.00 0.00 0.00 4.70
5601 5836 1.446272 GGAAGAAGACGGTGGAGCG 60.446 63.158 0.00 0.00 0.00 5.03
5602 5837 1.585006 GAAGAAGACGGTGGAGCGA 59.415 57.895 5.07 0.00 0.00 4.93
5603 5838 0.456995 GAAGAAGACGGTGGAGCGAG 60.457 60.000 5.07 0.00 0.00 5.03
5604 5839 1.179814 AAGAAGACGGTGGAGCGAGT 61.180 55.000 5.07 0.00 0.00 4.18
5605 5840 1.444553 GAAGACGGTGGAGCGAGTG 60.445 63.158 5.07 0.00 0.00 3.51
5606 5841 2.820767 GAAGACGGTGGAGCGAGTGG 62.821 65.000 5.07 0.00 0.00 4.00
5610 5845 4.329545 GGTGGAGCGAGTGGCCAA 62.330 66.667 7.24 0.00 45.17 4.52
5611 5846 2.743928 GTGGAGCGAGTGGCCAAG 60.744 66.667 7.24 2.81 45.17 3.61
5612 5847 3.241530 TGGAGCGAGTGGCCAAGT 61.242 61.111 7.24 0.00 45.17 3.16
5613 5848 2.032681 GGAGCGAGTGGCCAAGTT 59.967 61.111 7.24 0.00 45.17 2.66
5614 5849 2.035442 GGAGCGAGTGGCCAAGTTC 61.035 63.158 7.24 9.77 45.17 3.01
5615 5850 1.301716 GAGCGAGTGGCCAAGTTCA 60.302 57.895 7.24 0.00 45.17 3.18
5616 5851 1.569479 GAGCGAGTGGCCAAGTTCAC 61.569 60.000 7.24 0.00 45.17 3.18
5617 5852 2.617274 GCGAGTGGCCAAGTTCACC 61.617 63.158 7.24 0.00 34.67 4.02
5618 5853 1.227823 CGAGTGGCCAAGTTCACCA 60.228 57.895 7.24 0.00 34.67 4.17
5619 5854 1.230635 CGAGTGGCCAAGTTCACCAG 61.231 60.000 7.24 0.00 33.12 4.00
5620 5855 0.108585 GAGTGGCCAAGTTCACCAGA 59.891 55.000 7.24 0.00 33.12 3.86
5621 5856 0.179018 AGTGGCCAAGTTCACCAGAC 60.179 55.000 7.24 0.00 33.12 3.51
5622 5857 0.465460 GTGGCCAAGTTCACCAGACA 60.465 55.000 7.24 0.00 33.12 3.41
5623 5858 0.257328 TGGCCAAGTTCACCAGACAA 59.743 50.000 0.61 0.00 0.00 3.18
5624 5859 0.954452 GGCCAAGTTCACCAGACAAG 59.046 55.000 0.00 0.00 0.00 3.16
5625 5860 0.954452 GCCAAGTTCACCAGACAAGG 59.046 55.000 0.00 0.00 0.00 3.61
5626 5861 1.476833 GCCAAGTTCACCAGACAAGGA 60.477 52.381 0.00 0.00 0.00 3.36
5627 5862 2.498167 CCAAGTTCACCAGACAAGGAG 58.502 52.381 0.00 0.00 0.00 3.69
5628 5863 2.104792 CCAAGTTCACCAGACAAGGAGA 59.895 50.000 0.00 0.00 0.00 3.71
5629 5864 3.433598 CCAAGTTCACCAGACAAGGAGAA 60.434 47.826 0.00 0.00 36.17 2.87
5630 5865 3.760580 AGTTCACCAGACAAGGAGAAG 57.239 47.619 0.00 0.00 38.62 2.85
5631 5866 2.147150 GTTCACCAGACAAGGAGAAGC 58.853 52.381 0.00 0.00 38.62 3.86
5632 5867 1.722034 TCACCAGACAAGGAGAAGCT 58.278 50.000 0.00 0.00 0.00 3.74
5633 5868 2.050144 TCACCAGACAAGGAGAAGCTT 58.950 47.619 0.00 0.00 0.00 3.74
5634 5869 2.149578 CACCAGACAAGGAGAAGCTTG 58.850 52.381 2.10 0.00 36.70 4.01
5635 5870 1.163554 CCAGACAAGGAGAAGCTTGC 58.836 55.000 2.10 0.00 34.20 4.01
5636 5871 1.544093 CCAGACAAGGAGAAGCTTGCA 60.544 52.381 2.10 0.00 34.20 4.08
5637 5872 2.434428 CAGACAAGGAGAAGCTTGCAT 58.566 47.619 2.10 0.00 34.20 3.96
5638 5873 2.161808 CAGACAAGGAGAAGCTTGCATG 59.838 50.000 2.10 1.82 34.20 4.06
5639 5874 1.471684 GACAAGGAGAAGCTTGCATGG 59.528 52.381 2.10 0.00 34.20 3.66
5640 5875 1.074405 ACAAGGAGAAGCTTGCATGGA 59.926 47.619 2.10 0.00 34.20 3.41
5641 5876 1.471684 CAAGGAGAAGCTTGCATGGAC 59.528 52.381 2.10 0.00 0.00 4.02
5642 5877 0.990374 AGGAGAAGCTTGCATGGACT 59.010 50.000 2.10 0.00 0.00 3.85
5643 5878 1.353694 AGGAGAAGCTTGCATGGACTT 59.646 47.619 2.10 0.00 0.00 3.01
5644 5879 1.742268 GGAGAAGCTTGCATGGACTTC 59.258 52.381 2.10 8.89 39.03 3.01
5645 5880 1.396301 GAGAAGCTTGCATGGACTTCG 59.604 52.381 2.10 0.00 42.61 3.79
5646 5881 0.179179 GAAGCTTGCATGGACTTCGC 60.179 55.000 2.10 0.00 30.23 4.70
5647 5882 1.589716 AAGCTTGCATGGACTTCGCC 61.590 55.000 0.00 0.00 0.00 5.54
5648 5883 2.042831 GCTTGCATGGACTTCGCCT 61.043 57.895 1.34 0.00 0.00 5.52
5649 5884 0.744414 GCTTGCATGGACTTCGCCTA 60.744 55.000 1.34 0.00 0.00 3.93
5650 5885 1.009829 CTTGCATGGACTTCGCCTAC 58.990 55.000 0.00 0.00 0.00 3.18
5651 5886 0.323302 TTGCATGGACTTCGCCTACA 59.677 50.000 0.00 0.00 0.00 2.74
5652 5887 0.541392 TGCATGGACTTCGCCTACAT 59.459 50.000 0.00 0.00 0.00 2.29
5653 5888 0.940126 GCATGGACTTCGCCTACATG 59.060 55.000 0.00 0.00 41.26 3.21
5654 5889 0.940126 CATGGACTTCGCCTACATGC 59.060 55.000 0.00 0.00 33.45 4.06
5662 5897 3.102097 GCCTACATGCGCACTTCC 58.898 61.111 14.90 0.00 0.00 3.46
5663 5898 1.745115 GCCTACATGCGCACTTCCA 60.745 57.895 14.90 0.00 0.00 3.53
5664 5899 1.097547 GCCTACATGCGCACTTCCAT 61.098 55.000 14.90 0.00 0.00 3.41
5665 5900 0.940126 CCTACATGCGCACTTCCATC 59.060 55.000 14.90 0.00 0.00 3.51
5666 5901 1.473965 CCTACATGCGCACTTCCATCT 60.474 52.381 14.90 0.00 0.00 2.90
5667 5902 1.863454 CTACATGCGCACTTCCATCTC 59.137 52.381 14.90 0.00 0.00 2.75
5668 5903 0.745845 ACATGCGCACTTCCATCTCC 60.746 55.000 14.90 0.00 0.00 3.71
5669 5904 0.745486 CATGCGCACTTCCATCTCCA 60.745 55.000 14.90 0.00 0.00 3.86
5670 5905 0.035152 ATGCGCACTTCCATCTCCAA 60.035 50.000 14.90 0.00 0.00 3.53
5671 5906 0.955428 TGCGCACTTCCATCTCCAAC 60.955 55.000 5.66 0.00 0.00 3.77
5672 5907 0.674895 GCGCACTTCCATCTCCAACT 60.675 55.000 0.30 0.00 0.00 3.16
5673 5908 1.405526 GCGCACTTCCATCTCCAACTA 60.406 52.381 0.30 0.00 0.00 2.24
5674 5909 2.743183 GCGCACTTCCATCTCCAACTAT 60.743 50.000 0.30 0.00 0.00 2.12
5675 5910 3.126831 CGCACTTCCATCTCCAACTATC 58.873 50.000 0.00 0.00 0.00 2.08
5676 5911 3.181471 CGCACTTCCATCTCCAACTATCT 60.181 47.826 0.00 0.00 0.00 1.98
5677 5912 4.681781 CGCACTTCCATCTCCAACTATCTT 60.682 45.833 0.00 0.00 0.00 2.40
5678 5913 4.574013 GCACTTCCATCTCCAACTATCTTG 59.426 45.833 0.00 0.00 0.00 3.02
5679 5914 4.574013 CACTTCCATCTCCAACTATCTTGC 59.426 45.833 0.00 0.00 0.00 4.01
5680 5915 4.472833 ACTTCCATCTCCAACTATCTTGCT 59.527 41.667 0.00 0.00 0.00 3.91
5681 5916 4.679373 TCCATCTCCAACTATCTTGCTC 57.321 45.455 0.00 0.00 0.00 4.26
5682 5917 3.389329 TCCATCTCCAACTATCTTGCTCC 59.611 47.826 0.00 0.00 0.00 4.70
5683 5918 3.135348 CCATCTCCAACTATCTTGCTCCA 59.865 47.826 0.00 0.00 0.00 3.86
5684 5919 4.384537 CCATCTCCAACTATCTTGCTCCAA 60.385 45.833 0.00 0.00 0.00 3.53
5685 5920 4.478206 TCTCCAACTATCTTGCTCCAAG 57.522 45.455 0.00 0.00 42.25 3.61
5694 5929 3.623906 TCTTGCTCCAAGAAGAGATGG 57.376 47.619 5.26 0.00 45.84 3.51
5695 5930 3.176411 TCTTGCTCCAAGAAGAGATGGA 58.824 45.455 5.26 0.00 45.84 3.41
5696 5931 3.584406 TCTTGCTCCAAGAAGAGATGGAA 59.416 43.478 5.26 0.00 45.84 3.53
5697 5932 4.042062 TCTTGCTCCAAGAAGAGATGGAAA 59.958 41.667 5.26 0.00 45.84 3.13
5698 5933 3.947868 TGCTCCAAGAAGAGATGGAAAG 58.052 45.455 0.00 0.00 44.77 2.62
5699 5934 3.277715 GCTCCAAGAAGAGATGGAAAGG 58.722 50.000 0.00 0.00 44.77 3.11
5700 5935 3.883669 CTCCAAGAAGAGATGGAAAGGG 58.116 50.000 0.00 0.00 44.77 3.95
5701 5936 2.025887 TCCAAGAAGAGATGGAAAGGGC 60.026 50.000 0.00 0.00 42.61 5.19
5702 5937 2.291153 CCAAGAAGAGATGGAAAGGGCA 60.291 50.000 0.00 0.00 39.12 5.36
5703 5938 3.424703 CAAGAAGAGATGGAAAGGGCAA 58.575 45.455 0.00 0.00 0.00 4.52
5704 5939 3.078891 AGAAGAGATGGAAAGGGCAAC 57.921 47.619 0.00 0.00 0.00 4.17
5705 5940 2.376518 AGAAGAGATGGAAAGGGCAACA 59.623 45.455 0.00 0.00 39.74 3.33
5706 5941 2.978156 AGAGATGGAAAGGGCAACAA 57.022 45.000 0.00 0.00 39.74 2.83
5707 5942 2.519013 AGAGATGGAAAGGGCAACAAC 58.481 47.619 0.00 0.00 39.74 3.32
5708 5943 2.158475 AGAGATGGAAAGGGCAACAACA 60.158 45.455 0.00 0.00 39.74 3.33
5709 5944 2.627699 GAGATGGAAAGGGCAACAACAA 59.372 45.455 0.00 0.00 39.74 2.83
5710 5945 2.365293 AGATGGAAAGGGCAACAACAAC 59.635 45.455 0.00 0.00 39.74 3.32
5711 5946 1.561643 TGGAAAGGGCAACAACAACA 58.438 45.000 0.00 0.00 39.74 3.33
5712 5947 2.114616 TGGAAAGGGCAACAACAACAT 58.885 42.857 0.00 0.00 39.74 2.71
5713 5948 2.158986 TGGAAAGGGCAACAACAACATG 60.159 45.455 0.00 0.00 39.74 3.21
5714 5949 2.102252 GGAAAGGGCAACAACAACATGA 59.898 45.455 0.00 0.00 39.74 3.07
5715 5950 3.431486 GGAAAGGGCAACAACAACATGAA 60.431 43.478 0.00 0.00 39.74 2.57
5716 5951 3.457610 AAGGGCAACAACAACATGAAG 57.542 42.857 0.00 0.00 39.74 3.02
5717 5952 1.069049 AGGGCAACAACAACATGAAGC 59.931 47.619 0.00 0.00 39.74 3.86
5718 5953 1.130955 GGCAACAACAACATGAAGCG 58.869 50.000 0.00 0.00 0.00 4.68
5719 5954 1.268999 GGCAACAACAACATGAAGCGA 60.269 47.619 0.00 0.00 0.00 4.93
5720 5955 1.780860 GCAACAACAACATGAAGCGAC 59.219 47.619 0.00 0.00 0.00 5.19
5721 5956 2.036217 CAACAACAACATGAAGCGACG 58.964 47.619 0.00 0.00 0.00 5.12
5722 5957 1.577468 ACAACAACATGAAGCGACGA 58.423 45.000 0.00 0.00 0.00 4.20
5723 5958 1.526887 ACAACAACATGAAGCGACGAG 59.473 47.619 0.00 0.00 0.00 4.18
5724 5959 1.136252 CAACAACATGAAGCGACGAGG 60.136 52.381 0.00 0.00 0.00 4.63
5725 5960 0.317160 ACAACATGAAGCGACGAGGA 59.683 50.000 0.00 0.00 0.00 3.71
5726 5961 1.066858 ACAACATGAAGCGACGAGGAT 60.067 47.619 0.00 0.00 0.00 3.24
5727 5962 2.002586 CAACATGAAGCGACGAGGATT 58.997 47.619 0.00 0.00 0.00 3.01
5728 5963 1.645034 ACATGAAGCGACGAGGATTG 58.355 50.000 0.00 0.00 0.00 2.67
5729 5964 1.066858 ACATGAAGCGACGAGGATTGT 60.067 47.619 0.00 0.00 33.40 2.71
5730 5965 2.002586 CATGAAGCGACGAGGATTGTT 58.997 47.619 0.00 0.00 28.27 2.83
5731 5966 1.428448 TGAAGCGACGAGGATTGTTG 58.572 50.000 0.00 0.00 36.92 3.33
5732 5967 1.270094 TGAAGCGACGAGGATTGTTGT 60.270 47.619 0.00 0.00 36.19 3.32
5733 5968 1.798813 GAAGCGACGAGGATTGTTGTT 59.201 47.619 0.00 0.00 36.19 2.83
5734 5969 1.148310 AGCGACGAGGATTGTTGTTG 58.852 50.000 0.00 0.00 36.19 3.33
5735 5970 0.452784 GCGACGAGGATTGTTGTTGC 60.453 55.000 0.00 0.00 36.19 4.17
5736 5971 0.165944 CGACGAGGATTGTTGTTGCC 59.834 55.000 0.00 0.00 28.27 4.52
5737 5972 1.234821 GACGAGGATTGTTGTTGCCA 58.765 50.000 0.00 0.00 28.27 4.92
5738 5973 1.606668 GACGAGGATTGTTGTTGCCAA 59.393 47.619 0.00 0.00 28.27 4.52
5739 5974 1.608590 ACGAGGATTGTTGTTGCCAAG 59.391 47.619 0.00 0.00 0.00 3.61
5740 5975 1.879380 CGAGGATTGTTGTTGCCAAGA 59.121 47.619 0.00 0.00 0.00 3.02
5741 5976 2.489329 CGAGGATTGTTGTTGCCAAGAT 59.511 45.455 0.00 0.00 0.00 2.40
5742 5977 3.689161 CGAGGATTGTTGTTGCCAAGATA 59.311 43.478 0.00 0.00 0.00 1.98
5743 5978 4.437390 CGAGGATTGTTGTTGCCAAGATAC 60.437 45.833 0.00 0.00 0.00 2.24
5744 5979 4.406456 AGGATTGTTGTTGCCAAGATACA 58.594 39.130 0.00 0.00 0.00 2.29
5745 5980 5.018809 AGGATTGTTGTTGCCAAGATACAT 58.981 37.500 0.00 0.00 0.00 2.29
5746 5981 5.126061 AGGATTGTTGTTGCCAAGATACATC 59.874 40.000 0.00 0.00 0.00 3.06
5747 5982 4.418013 TTGTTGTTGCCAAGATACATCG 57.582 40.909 0.00 0.00 0.00 3.84
5748 5983 2.746904 TGTTGTTGCCAAGATACATCGG 59.253 45.455 0.00 0.00 0.00 4.18
5749 5984 1.378531 TGTTGCCAAGATACATCGGC 58.621 50.000 0.00 0.00 45.11 5.54
5753 5988 1.953559 GCCAAGATACATCGGCAAGA 58.046 50.000 0.00 0.00 44.25 3.02
5754 5989 2.288666 GCCAAGATACATCGGCAAGAA 58.711 47.619 0.00 0.00 44.25 2.52
5755 5990 2.289002 GCCAAGATACATCGGCAAGAAG 59.711 50.000 0.00 0.00 44.25 2.85
5756 5991 2.289002 CCAAGATACATCGGCAAGAAGC 59.711 50.000 0.00 0.00 44.65 3.86
5766 6001 2.436646 CAAGAAGCCGCGGGTGAT 60.437 61.111 33.14 19.92 0.00 3.06
5767 6002 2.125106 AAGAAGCCGCGGGTGATC 60.125 61.111 33.14 25.16 0.00 2.92
5768 6003 4.514577 AGAAGCCGCGGGTGATCG 62.515 66.667 33.14 0.12 0.00 3.69
5773 6008 3.192922 CCGCGGGTGATCGGTTTC 61.193 66.667 20.10 0.00 40.72 2.78
5774 6009 2.433491 CGCGGGTGATCGGTTTCA 60.433 61.111 0.00 0.00 0.00 2.69
5775 6010 1.813753 CGCGGGTGATCGGTTTCAT 60.814 57.895 0.00 0.00 0.00 2.57
5776 6011 1.721487 GCGGGTGATCGGTTTCATG 59.279 57.895 0.00 0.00 0.00 3.07
5777 6012 1.721487 CGGGTGATCGGTTTCATGC 59.279 57.895 0.00 0.00 0.00 4.06
5778 6013 1.714899 CGGGTGATCGGTTTCATGCC 61.715 60.000 0.00 0.00 0.00 4.40
5779 6014 1.384222 GGGTGATCGGTTTCATGCCC 61.384 60.000 0.00 0.00 0.00 5.36
5780 6015 0.394352 GGTGATCGGTTTCATGCCCT 60.394 55.000 0.00 0.00 0.00 5.19
5781 6016 1.017387 GTGATCGGTTTCATGCCCTC 58.983 55.000 0.00 0.00 0.00 4.30
5782 6017 0.107214 TGATCGGTTTCATGCCCTCC 60.107 55.000 0.00 0.00 0.00 4.30
5783 6018 0.181350 GATCGGTTTCATGCCCTCCT 59.819 55.000 0.00 0.00 0.00 3.69
5784 6019 0.181350 ATCGGTTTCATGCCCTCCTC 59.819 55.000 0.00 0.00 0.00 3.71
5785 6020 1.452108 CGGTTTCATGCCCTCCTCC 60.452 63.158 0.00 0.00 0.00 4.30
5786 6021 1.452108 GGTTTCATGCCCTCCTCCG 60.452 63.158 0.00 0.00 0.00 4.63
5787 6022 1.452108 GTTTCATGCCCTCCTCCGG 60.452 63.158 0.00 0.00 0.00 5.14
5789 6024 3.943137 TTCATGCCCTCCTCCGGGT 62.943 63.158 0.00 0.00 46.47 5.28
5790 6025 2.445845 CATGCCCTCCTCCGGGTA 60.446 66.667 0.00 0.00 46.47 3.69
5791 6026 2.621115 ATGCCCTCCTCCGGGTAT 59.379 61.111 0.00 0.00 46.47 2.73
5792 6027 1.843376 ATGCCCTCCTCCGGGTATG 60.843 63.158 0.00 0.00 46.26 2.39
5793 6028 3.242291 GCCCTCCTCCGGGTATGG 61.242 72.222 0.00 0.00 46.47 2.74
5794 6029 2.285868 CCCTCCTCCGGGTATGGT 59.714 66.667 0.00 0.00 39.51 3.55
5795 6030 1.384082 CCCTCCTCCGGGTATGGTT 60.384 63.158 0.00 0.00 39.51 3.67
5796 6031 1.696097 CCCTCCTCCGGGTATGGTTG 61.696 65.000 0.00 0.00 39.51 3.77
5797 6032 1.146263 CTCCTCCGGGTATGGTTGC 59.854 63.158 0.00 0.00 0.00 4.17
5798 6033 2.203015 CCTCCGGGTATGGTTGCG 60.203 66.667 0.00 0.00 0.00 4.85
5799 6034 2.727392 CCTCCGGGTATGGTTGCGA 61.727 63.158 0.00 0.00 0.00 5.10
5800 6035 1.445942 CTCCGGGTATGGTTGCGAT 59.554 57.895 0.00 0.00 0.00 4.58
5801 6036 0.600255 CTCCGGGTATGGTTGCGATC 60.600 60.000 0.00 0.00 0.00 3.69
5802 6037 1.954146 CCGGGTATGGTTGCGATCG 60.954 63.158 11.69 11.69 0.00 3.69
5803 6038 1.066752 CGGGTATGGTTGCGATCGA 59.933 57.895 21.57 0.59 0.00 3.59
5804 6039 0.939577 CGGGTATGGTTGCGATCGAG 60.940 60.000 21.57 0.00 0.00 4.04
5805 6040 0.104304 GGGTATGGTTGCGATCGAGT 59.896 55.000 21.57 0.00 0.00 4.18
5806 6041 1.209128 GGTATGGTTGCGATCGAGTG 58.791 55.000 21.57 0.00 0.00 3.51
5807 6042 1.202371 GGTATGGTTGCGATCGAGTGA 60.202 52.381 21.57 0.00 0.00 3.41
5808 6043 2.536365 GTATGGTTGCGATCGAGTGAA 58.464 47.619 21.57 2.11 0.00 3.18
5809 6044 1.359848 ATGGTTGCGATCGAGTGAAC 58.640 50.000 21.57 14.18 0.00 3.18
5810 6045 1.006825 TGGTTGCGATCGAGTGAACG 61.007 55.000 21.57 0.00 42.60 3.95
5811 6046 1.683790 GGTTGCGATCGAGTGAACGG 61.684 60.000 21.57 0.00 40.36 4.44
5812 6047 0.731514 GTTGCGATCGAGTGAACGGA 60.732 55.000 21.57 0.00 40.36 4.69
5813 6048 0.456142 TTGCGATCGAGTGAACGGAG 60.456 55.000 21.57 0.00 41.33 4.63
5814 6049 1.586564 GCGATCGAGTGAACGGAGG 60.587 63.158 21.57 0.00 40.36 4.30
5815 6050 1.064296 CGATCGAGTGAACGGAGGG 59.936 63.158 10.26 0.00 36.82 4.30
5816 6051 1.437986 GATCGAGTGAACGGAGGGG 59.562 63.158 0.00 0.00 0.00 4.79
5817 6052 2.017559 GATCGAGTGAACGGAGGGGG 62.018 65.000 0.00 0.00 0.00 5.40
5818 6053 2.800159 ATCGAGTGAACGGAGGGGGT 62.800 60.000 0.00 0.00 0.00 4.95
5819 6054 2.663196 GAGTGAACGGAGGGGGTG 59.337 66.667 0.00 0.00 0.00 4.61
5820 6055 1.911766 GAGTGAACGGAGGGGGTGA 60.912 63.158 0.00 0.00 0.00 4.02
5821 6056 1.229529 AGTGAACGGAGGGGGTGAT 60.230 57.895 0.00 0.00 0.00 3.06
5822 6057 1.078426 GTGAACGGAGGGGGTGATG 60.078 63.158 0.00 0.00 0.00 3.07
5823 6058 1.229368 TGAACGGAGGGGGTGATGA 60.229 57.895 0.00 0.00 0.00 2.92
5824 6059 0.620410 TGAACGGAGGGGGTGATGAT 60.620 55.000 0.00 0.00 0.00 2.45
5825 6060 0.179045 GAACGGAGGGGGTGATGATG 60.179 60.000 0.00 0.00 0.00 3.07
5826 6061 1.635817 AACGGAGGGGGTGATGATGG 61.636 60.000 0.00 0.00 0.00 3.51
5827 6062 2.822637 CGGAGGGGGTGATGATGGG 61.823 68.421 0.00 0.00 0.00 4.00
5828 6063 2.464403 GGAGGGGGTGATGATGGGG 61.464 68.421 0.00 0.00 0.00 4.96
5829 6064 1.385915 GAGGGGGTGATGATGGGGA 60.386 63.158 0.00 0.00 0.00 4.81
5830 6065 0.773700 GAGGGGGTGATGATGGGGAT 60.774 60.000 0.00 0.00 0.00 3.85
5831 6066 1.070127 AGGGGGTGATGATGGGGATG 61.070 60.000 0.00 0.00 0.00 3.51
5832 6067 1.067762 GGGGGTGATGATGGGGATGA 61.068 60.000 0.00 0.00 0.00 2.92
5833 6068 1.078955 GGGGTGATGATGGGGATGAT 58.921 55.000 0.00 0.00 0.00 2.45
5834 6069 2.278245 GGGGTGATGATGGGGATGATA 58.722 52.381 0.00 0.00 0.00 2.15
5835 6070 2.854967 GGGGTGATGATGGGGATGATAT 59.145 50.000 0.00 0.00 0.00 1.63
5836 6071 3.372349 GGGGTGATGATGGGGATGATATG 60.372 52.174 0.00 0.00 0.00 1.78
5837 6072 3.372349 GGGTGATGATGGGGATGATATGG 60.372 52.174 0.00 0.00 0.00 2.74
5838 6073 3.524789 GGTGATGATGGGGATGATATGGA 59.475 47.826 0.00 0.00 0.00 3.41
5839 6074 4.521146 GTGATGATGGGGATGATATGGAC 58.479 47.826 0.00 0.00 0.00 4.02
5840 6075 4.226846 GTGATGATGGGGATGATATGGACT 59.773 45.833 0.00 0.00 0.00 3.85
5841 6076 4.853856 TGATGATGGGGATGATATGGACTT 59.146 41.667 0.00 0.00 0.00 3.01
5842 6077 4.645863 TGATGGGGATGATATGGACTTG 57.354 45.455 0.00 0.00 0.00 3.16
5843 6078 3.331591 TGATGGGGATGATATGGACTTGG 59.668 47.826 0.00 0.00 0.00 3.61
5844 6079 3.073411 TGGGGATGATATGGACTTGGA 57.927 47.619 0.00 0.00 0.00 3.53
5845 6080 3.612458 TGGGGATGATATGGACTTGGAT 58.388 45.455 0.00 0.00 0.00 3.41
5846 6081 3.989558 TGGGGATGATATGGACTTGGATT 59.010 43.478 0.00 0.00 0.00 3.01
5847 6082 5.169438 TGGGGATGATATGGACTTGGATTA 58.831 41.667 0.00 0.00 0.00 1.75
5848 6083 5.251468 TGGGGATGATATGGACTTGGATTAG 59.749 44.000 0.00 0.00 0.00 1.73
5849 6084 5.339530 GGGGATGATATGGACTTGGATTAGG 60.340 48.000 0.00 0.00 0.00 2.69
5850 6085 5.251700 GGGATGATATGGACTTGGATTAGGT 59.748 44.000 0.00 0.00 0.00 3.08
5851 6086 6.176183 GGATGATATGGACTTGGATTAGGTG 58.824 44.000 0.00 0.00 0.00 4.00
5852 6087 6.013379 GGATGATATGGACTTGGATTAGGTGA 60.013 42.308 0.00 0.00 0.00 4.02
5853 6088 7.311549 GGATGATATGGACTTGGATTAGGTGAT 60.312 40.741 0.00 0.00 0.00 3.06
5854 6089 7.392766 TGATATGGACTTGGATTAGGTGATT 57.607 36.000 0.00 0.00 0.00 2.57
5855 6090 7.226441 TGATATGGACTTGGATTAGGTGATTG 58.774 38.462 0.00 0.00 0.00 2.67
5856 6091 5.715439 ATGGACTTGGATTAGGTGATTGA 57.285 39.130 0.00 0.00 0.00 2.57
5857 6092 5.102953 TGGACTTGGATTAGGTGATTGAG 57.897 43.478 0.00 0.00 0.00 3.02
5858 6093 4.536090 TGGACTTGGATTAGGTGATTGAGT 59.464 41.667 0.00 0.00 0.00 3.41
5859 6094 5.724370 TGGACTTGGATTAGGTGATTGAGTA 59.276 40.000 0.00 0.00 0.00 2.59
5860 6095 6.386927 TGGACTTGGATTAGGTGATTGAGTAT 59.613 38.462 0.00 0.00 0.00 2.12
5861 6096 6.708054 GGACTTGGATTAGGTGATTGAGTATG 59.292 42.308 0.00 0.00 0.00 2.39
5862 6097 6.595682 ACTTGGATTAGGTGATTGAGTATGG 58.404 40.000 0.00 0.00 0.00 2.74
5863 6098 4.973168 TGGATTAGGTGATTGAGTATGGC 58.027 43.478 0.00 0.00 0.00 4.40
5864 6099 4.411869 TGGATTAGGTGATTGAGTATGGCA 59.588 41.667 0.00 0.00 0.00 4.92
5865 6100 4.757149 GGATTAGGTGATTGAGTATGGCAC 59.243 45.833 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 8.801299 TCGATGAAGAGAAGCTCAGAAATATAT 58.199 33.333 0.00 0.00 32.06 0.86
69 70 8.171164 TCGATGAAGAGAAGCTCAGAAATATA 57.829 34.615 0.00 0.00 32.06 0.86
73 74 4.790765 TCGATGAAGAGAAGCTCAGAAA 57.209 40.909 0.00 0.00 32.06 2.52
76 77 4.304537 TCATCGATGAAGAGAAGCTCAG 57.695 45.455 25.44 0.00 33.08 3.35
100 101 2.253452 CCAGCGCAACAGAGCAAC 59.747 61.111 11.47 0.00 35.48 4.17
104 105 2.743928 GGGACCAGCGCAACAGAG 60.744 66.667 11.47 0.00 0.00 3.35
116 117 0.906282 TGTTAAGACCTCCCGGGACC 60.906 60.000 22.63 12.04 38.76 4.46
122 123 3.118738 ACGTCATCATGTTAAGACCTCCC 60.119 47.826 0.00 0.00 0.00 4.30
123 124 4.113354 GACGTCATCATGTTAAGACCTCC 58.887 47.826 11.55 0.00 0.00 4.30
124 125 4.113354 GGACGTCATCATGTTAAGACCTC 58.887 47.826 18.91 0.00 0.00 3.85
139 140 1.069090 GGCAACAGTGAGGACGTCA 59.931 57.895 18.91 0.00 0.00 4.35
155 156 1.335872 CCGGACAAATCTTGTTGTGGC 60.336 52.381 0.00 0.00 45.52 5.01
181 182 1.956629 CTGCCGTCGTCACCCCTTAT 61.957 60.000 0.00 0.00 0.00 1.73
188 189 3.106407 GAGTGCTGCCGTCGTCAC 61.106 66.667 0.00 0.00 0.00 3.67
195 196 1.662629 CTAGTCAAATGAGTGCTGCCG 59.337 52.381 0.00 0.00 0.00 5.69
206 207 8.970859 AATATAAGCACTGAAGCTAGTCAAAT 57.029 30.769 0.00 0.00 45.89 2.32
322 330 6.349363 GGATTCAGCGATCCAGTTAAACTTTT 60.349 38.462 10.69 0.00 44.15 2.27
346 354 1.859398 CGTGTTGACGTGGTGATGG 59.141 57.895 0.00 0.00 40.91 3.51
359 367 1.598130 GCCAACCAGAGAGCGTGTT 60.598 57.895 0.00 0.00 0.00 3.32
747 766 2.265904 GGTGGGTTTGACTTCGGGC 61.266 63.158 0.00 0.00 0.00 6.13
775 794 2.822701 GGAGTTTTAGGCGGGCGG 60.823 66.667 0.00 0.00 0.00 6.13
1260 1286 1.685224 GACCAGATCCAGGTTGCCA 59.315 57.895 8.69 0.00 40.09 4.92
1317 1343 3.308705 GGACGAAGGGGTGGTCGT 61.309 66.667 0.00 0.00 41.76 4.34
1327 1353 1.064296 CCAGATCCGACGGACGAAG 59.936 63.158 21.02 9.49 45.77 3.79
1335 1361 2.990066 AAACCAGATCCAGATCCGAC 57.010 50.000 4.01 0.00 38.58 4.79
1353 1379 4.943705 GGAATTCAGCTGACAATGACCTAA 59.056 41.667 18.03 0.00 0.00 2.69
1390 1416 1.373371 GGCTTTTTCTGCAAGGGCG 60.373 57.895 0.00 0.00 45.35 6.13
1487 1513 3.427425 CGCAATTCGGCCGGAACA 61.427 61.111 27.83 1.61 37.50 3.18
1496 1522 2.395690 GTCTGGTCGCGCAATTCG 59.604 61.111 8.75 0.00 42.12 3.34
1520 1546 1.975680 GAACCACTCACCCCAACTCTA 59.024 52.381 0.00 0.00 0.00 2.43
1540 1566 7.162546 CGATTACAAAATCAATTAGTGTGAGCG 59.837 37.037 7.18 7.18 41.44 5.03
1542 1568 8.450964 ACCGATTACAAAATCAATTAGTGTGAG 58.549 33.333 0.00 0.00 41.44 3.51
1586 1612 1.873591 CCTGTGAACGAACAAGGAAGG 59.126 52.381 0.00 0.00 0.00 3.46
1598 1624 1.656441 CCTGCTGTTGCCTGTGAAC 59.344 57.895 0.00 0.00 38.71 3.18
1653 1679 2.235016 AGACCATTTACCGCTTGCAAA 58.765 42.857 0.00 0.00 0.00 3.68
1699 1750 1.832883 AACCCGCAATGCAGACAATA 58.167 45.000 5.91 0.00 0.00 1.90
1733 1784 8.527810 ACAAAAACCTCACTCAAACATAAAGAA 58.472 29.630 0.00 0.00 0.00 2.52
1735 1786 8.702163 AACAAAAACCTCACTCAAACATAAAG 57.298 30.769 0.00 0.00 0.00 1.85
1737 1788 9.743057 CATAACAAAAACCTCACTCAAACATAA 57.257 29.630 0.00 0.00 0.00 1.90
1738 1789 8.908903 ACATAACAAAAACCTCACTCAAACATA 58.091 29.630 0.00 0.00 0.00 2.29
1739 1790 7.781056 ACATAACAAAAACCTCACTCAAACAT 58.219 30.769 0.00 0.00 0.00 2.71
1745 1796 9.836076 GGTAATAACATAACAAAAACCTCACTC 57.164 33.333 0.00 0.00 0.00 3.51
1762 1813 7.845037 TCAATCATGGCAAATTGGTAATAACA 58.155 30.769 19.65 2.51 34.37 2.41
1858 1909 1.315257 CCCAATCCGGCTGGTTCTTG 61.315 60.000 12.43 13.33 36.30 3.02
2130 2186 5.883661 AGTTGCTTGTGTTATGTGATATGC 58.116 37.500 0.00 0.00 0.00 3.14
2290 2348 4.154737 TGGCTCTGAAAGAATTGACATTCG 59.845 41.667 0.00 0.00 46.34 3.34
2315 2373 5.696724 GGCTACAGTACCATAGCAATGTAAG 59.303 44.000 21.41 4.87 44.70 2.34
2357 2420 9.884465 CAAACCTTATCACTTCAGTAAAGAAAG 57.116 33.333 0.00 0.00 38.44 2.62
2366 2429 4.275689 TGTGCACAAACCTTATCACTTCAG 59.724 41.667 19.28 0.00 0.00 3.02
2578 2644 8.993121 CCATTGGATATCTTATTCACTACACAC 58.007 37.037 2.05 0.00 0.00 3.82
2616 2682 3.373565 GGAAAGTTGGCAGGCCCG 61.374 66.667 8.02 0.00 35.87 6.13
2619 2685 2.919494 CGGTGGAAAGTTGGCAGGC 61.919 63.158 0.00 0.00 0.00 4.85
2620 2686 1.106944 AACGGTGGAAAGTTGGCAGG 61.107 55.000 0.00 0.00 0.00 4.85
2621 2687 0.030638 CAACGGTGGAAAGTTGGCAG 59.969 55.000 0.00 0.00 42.72 4.85
2716 2791 9.570488 GTTACCTTGAACTCTACTTACATACAG 57.430 37.037 0.00 0.00 0.00 2.74
2775 2850 4.617253 TTCCTAAACACTCTGCTTAGCA 57.383 40.909 6.76 6.76 36.92 3.49
2877 2953 9.338622 ACAGATAATTAATGGTAACCTGTAAGC 57.661 33.333 0.00 0.00 31.49 3.09
3070 3146 7.047891 TCAACCTGTGGACATAAAGATGATAC 58.952 38.462 0.00 0.00 36.48 2.24
3139 3215 7.680982 TCACAAATTACGAGGACAATAATTCG 58.319 34.615 0.00 0.00 38.88 3.34
3153 3229 3.074412 AGCAGAGGGTTCACAAATTACG 58.926 45.455 0.00 0.00 0.00 3.18
3253 3329 9.334947 ACTCATCAATCCAATTAGACATAACAG 57.665 33.333 0.00 0.00 0.00 3.16
3286 3364 9.533253 AATTACACATTTTTCTTCTTTCAGTGG 57.467 29.630 0.00 0.00 0.00 4.00
3325 3404 5.478233 TTAATGTATTGCGGTGACATGAC 57.522 39.130 0.00 0.00 34.10 3.06
3390 3471 9.290988 GGATTTTTACACATTTAAATTGGGGTT 57.709 29.630 0.00 0.00 0.00 4.11
3392 3473 8.854614 TGGATTTTTACACATTTAAATTGGGG 57.145 30.769 0.00 0.00 0.00 4.96
3453 3534 7.112984 GCCTTGAAACAGTGTTAAATAAAGTCG 59.887 37.037 9.37 0.16 0.00 4.18
3502 3583 1.812922 CAGCTCAGACCGATGGCAC 60.813 63.158 0.00 0.00 0.00 5.01
3559 3656 9.226606 CTTCCATTAGTGATACACCAAAAACTA 57.773 33.333 0.00 0.00 34.49 2.24
3819 3927 2.280308 TGGGCTGGGAACTAACCTAT 57.720 50.000 0.00 0.00 0.00 2.57
3850 3958 3.217626 AGCTGACTTCTTTTGGGAACAG 58.782 45.455 0.00 0.00 44.54 3.16
3929 4037 6.980978 CCTGTAGAGAATGGTAATGTACACAG 59.019 42.308 0.00 0.00 0.00 3.66
4034 4241 8.220755 TGGCTATGAGTTTTTATGGACATAAC 57.779 34.615 4.34 0.00 33.40 1.89
4089 4296 5.450592 TCAGCACAATGAAAACAAGCATA 57.549 34.783 0.00 0.00 0.00 3.14
4403 4613 6.921857 AGCAAACAAGTGAAATTCATCTTCAG 59.078 34.615 0.00 0.00 33.56 3.02
4652 4862 3.624707 GCCTCTTACCAAATCCATCCACA 60.625 47.826 0.00 0.00 0.00 4.17
4717 4927 8.814038 AGCAAAACAAATGAGATAGGTCTTAT 57.186 30.769 0.00 0.00 33.97 1.73
4720 4930 7.309438 GGAAAGCAAAACAAATGAGATAGGTCT 60.309 37.037 0.00 0.00 37.42 3.85
4721 4931 6.808704 GGAAAGCAAAACAAATGAGATAGGTC 59.191 38.462 0.00 0.00 0.00 3.85
4722 4932 6.267471 TGGAAAGCAAAACAAATGAGATAGGT 59.733 34.615 0.00 0.00 0.00 3.08
4723 4933 6.690530 TGGAAAGCAAAACAAATGAGATAGG 58.309 36.000 0.00 0.00 0.00 2.57
4724 4934 8.248945 AGATGGAAAGCAAAACAAATGAGATAG 58.751 33.333 0.00 0.00 0.00 2.08
4733 4943 4.121317 CTGCAAGATGGAAAGCAAAACAA 58.879 39.130 0.00 0.00 36.44 2.83
4734 4944 3.493002 CCTGCAAGATGGAAAGCAAAACA 60.493 43.478 0.00 0.00 36.44 2.83
4735 4945 3.062042 CCTGCAAGATGGAAAGCAAAAC 58.938 45.455 0.00 0.00 36.44 2.43
4739 4949 1.250328 CACCTGCAAGATGGAAAGCA 58.750 50.000 0.00 0.00 34.07 3.91
4875 5085 3.769739 TGTTTCTGATGCTACACTGGT 57.230 42.857 0.00 0.00 0.00 4.00
4887 5097 2.766313 CTCCCACGTTGATGTTTCTGA 58.234 47.619 0.00 0.00 0.00 3.27
4918 5128 3.135167 TCCAAAACTTCTTCTACGGTGGT 59.865 43.478 0.00 0.00 0.00 4.16
4949 5159 3.259876 ACACAGAACCGGCTAAATGTAGA 59.740 43.478 0.00 0.00 0.00 2.59
4950 5160 3.370978 CACACAGAACCGGCTAAATGTAG 59.629 47.826 0.00 0.00 0.00 2.74
4970 5182 4.404691 CTTCAGGGGGAAGCACAC 57.595 61.111 0.00 0.00 45.99 3.82
4990 5203 1.969589 GACCGGGCGACAAAATGGT 60.970 57.895 6.32 0.00 0.00 3.55
5001 5214 3.934391 CTGGACGAACTGACCGGGC 62.934 68.421 6.32 1.57 35.42 6.13
5202 5419 0.783579 AACGAACAATGCATTTGCGC 59.216 45.000 9.83 0.00 45.83 6.09
5205 5422 2.133553 TGGCAACGAACAATGCATTTG 58.866 42.857 9.83 5.67 44.32 2.32
5239 5456 4.637534 GGCAGACAATCACACAATGTAGAT 59.362 41.667 0.00 0.00 0.00 1.98
5303 5538 4.447342 CAGGTGTCCATGGCCCCC 62.447 72.222 6.96 6.07 0.00 5.40
5373 5608 2.202544 GGTGAGAGCAGAGCGTCG 60.203 66.667 0.00 0.00 0.00 5.12
5410 5645 2.860735 GTCGTAGGTACAGACGTCGTAT 59.139 50.000 18.42 8.52 40.16 3.06
5422 5657 3.204827 GCGCCGGAGTCGTAGGTA 61.205 66.667 5.05 0.00 33.95 3.08
5484 5719 1.002868 AGATGCTTTGCCAGAGCGT 60.003 52.632 0.92 0.92 44.31 5.07
5485 5720 1.712977 GGAGATGCTTTGCCAGAGCG 61.713 60.000 2.52 0.00 44.31 5.03
5486 5721 1.382692 GGGAGATGCTTTGCCAGAGC 61.383 60.000 0.00 0.00 40.53 4.09
5487 5722 0.034767 TGGGAGATGCTTTGCCAGAG 60.035 55.000 0.00 0.00 31.88 3.35
5488 5723 0.405198 TTGGGAGATGCTTTGCCAGA 59.595 50.000 0.00 0.00 37.35 3.86
5489 5724 1.203994 CTTTGGGAGATGCTTTGCCAG 59.796 52.381 0.00 0.00 37.35 4.85
5490 5725 1.259609 CTTTGGGAGATGCTTTGCCA 58.740 50.000 0.00 0.00 33.92 4.92
5491 5726 0.533951 CCTTTGGGAGATGCTTTGCC 59.466 55.000 0.00 0.00 33.58 4.52
5492 5727 1.549203 TCCTTTGGGAGATGCTTTGC 58.451 50.000 0.00 0.00 36.57 3.68
5493 5728 3.094572 ACATCCTTTGGGAGATGCTTTG 58.905 45.455 0.00 0.00 45.86 2.77
5494 5729 3.463048 ACATCCTTTGGGAGATGCTTT 57.537 42.857 0.00 0.00 45.86 3.51
5495 5730 3.011032 AGAACATCCTTTGGGAGATGCTT 59.989 43.478 0.00 0.00 45.86 3.91
5496 5731 2.579860 AGAACATCCTTTGGGAGATGCT 59.420 45.455 0.00 0.00 45.86 3.79
5497 5732 2.948315 GAGAACATCCTTTGGGAGATGC 59.052 50.000 0.00 0.00 45.86 3.91
5498 5733 4.500499 AGAGAACATCCTTTGGGAGATG 57.500 45.455 0.00 0.00 45.86 2.90
5499 5734 4.410555 GGTAGAGAACATCCTTTGGGAGAT 59.589 45.833 0.00 0.00 45.86 2.75
5500 5735 3.775316 GGTAGAGAACATCCTTTGGGAGA 59.225 47.826 0.00 0.00 45.86 3.71
5501 5736 3.777522 AGGTAGAGAACATCCTTTGGGAG 59.222 47.826 0.00 0.00 45.86 4.30
5502 5737 3.519510 CAGGTAGAGAACATCCTTTGGGA 59.480 47.826 0.00 0.00 46.81 4.37
5503 5738 3.519510 TCAGGTAGAGAACATCCTTTGGG 59.480 47.826 0.00 0.00 0.00 4.12
5504 5739 4.826274 TCAGGTAGAGAACATCCTTTGG 57.174 45.455 0.00 0.00 0.00 3.28
5505 5740 5.814705 GTCATCAGGTAGAGAACATCCTTTG 59.185 44.000 0.00 0.00 0.00 2.77
5506 5741 5.394663 CGTCATCAGGTAGAGAACATCCTTT 60.395 44.000 0.00 0.00 0.00 3.11
5507 5742 4.098654 CGTCATCAGGTAGAGAACATCCTT 59.901 45.833 0.00 0.00 0.00 3.36
5508 5743 3.634448 CGTCATCAGGTAGAGAACATCCT 59.366 47.826 0.00 0.00 0.00 3.24
5509 5744 3.632604 TCGTCATCAGGTAGAGAACATCC 59.367 47.826 0.00 0.00 0.00 3.51
5510 5745 4.902443 TCGTCATCAGGTAGAGAACATC 57.098 45.455 0.00 0.00 0.00 3.06
5511 5746 5.595885 CATTCGTCATCAGGTAGAGAACAT 58.404 41.667 0.00 0.00 0.00 2.71
5512 5747 4.678044 GCATTCGTCATCAGGTAGAGAACA 60.678 45.833 0.00 0.00 0.00 3.18
5513 5748 3.799420 GCATTCGTCATCAGGTAGAGAAC 59.201 47.826 0.00 0.00 0.00 3.01
5514 5749 3.181475 GGCATTCGTCATCAGGTAGAGAA 60.181 47.826 0.00 0.00 0.00 2.87
5515 5750 2.362397 GGCATTCGTCATCAGGTAGAGA 59.638 50.000 0.00 0.00 0.00 3.10
5516 5751 2.748605 GGCATTCGTCATCAGGTAGAG 58.251 52.381 0.00 0.00 0.00 2.43
5517 5752 1.067060 CGGCATTCGTCATCAGGTAGA 59.933 52.381 0.00 0.00 0.00 2.59
5518 5753 1.491670 CGGCATTCGTCATCAGGTAG 58.508 55.000 0.00 0.00 0.00 3.18
5519 5754 0.104120 CCGGCATTCGTCATCAGGTA 59.896 55.000 0.00 0.00 37.11 3.08
5520 5755 1.153369 CCGGCATTCGTCATCAGGT 60.153 57.895 0.00 0.00 37.11 4.00
5521 5756 2.537560 GCCGGCATTCGTCATCAGG 61.538 63.158 24.80 0.00 37.11 3.86
5522 5757 2.537560 GGCCGGCATTCGTCATCAG 61.538 63.158 30.85 0.00 37.11 2.90
5523 5758 2.513666 GGCCGGCATTCGTCATCA 60.514 61.111 30.85 0.00 37.11 3.07
5524 5759 3.279875 GGGCCGGCATTCGTCATC 61.280 66.667 30.85 6.91 37.11 2.92
5525 5760 4.108299 TGGGCCGGCATTCGTCAT 62.108 61.111 30.85 0.00 37.11 3.06
5539 5774 3.891586 CTCGTGGTCGTCGTGTGGG 62.892 68.421 0.00 0.00 38.33 4.61
5540 5775 2.428569 CTCGTGGTCGTCGTGTGG 60.429 66.667 0.00 0.00 38.33 4.17
5541 5776 1.724929 GACTCGTGGTCGTCGTGTG 60.725 63.158 0.00 0.00 35.68 3.82
5542 5777 2.635899 GACTCGTGGTCGTCGTGT 59.364 61.111 0.00 0.00 37.64 4.49
5553 5788 1.068585 GAAACCACCCACGACTCGT 59.931 57.895 0.00 0.00 42.36 4.18
5554 5789 2.019951 CGAAACCACCCACGACTCG 61.020 63.158 0.00 0.00 0.00 4.18
5555 5790 0.037605 ATCGAAACCACCCACGACTC 60.038 55.000 0.00 0.00 37.58 3.36
5556 5791 0.037605 GATCGAAACCACCCACGACT 60.038 55.000 0.00 0.00 37.58 4.18
5557 5792 1.349259 CGATCGAAACCACCCACGAC 61.349 60.000 10.26 0.00 37.58 4.34
5558 5793 1.080366 CGATCGAAACCACCCACGA 60.080 57.895 10.26 0.00 39.01 4.35
5559 5794 1.080366 TCGATCGAAACCACCCACG 60.080 57.895 16.99 0.00 0.00 4.94
5560 5795 0.320073 TGTCGATCGAAACCACCCAC 60.320 55.000 21.31 5.07 0.00 4.61
5561 5796 0.611200 ATGTCGATCGAAACCACCCA 59.389 50.000 21.31 12.06 0.00 4.51
5562 5797 1.006832 CATGTCGATCGAAACCACCC 58.993 55.000 21.31 6.01 0.00 4.61
5563 5798 1.927174 CTCATGTCGATCGAAACCACC 59.073 52.381 21.31 6.80 0.00 4.61
5564 5799 1.927174 CCTCATGTCGATCGAAACCAC 59.073 52.381 21.31 8.23 0.00 4.16
5565 5800 1.822371 TCCTCATGTCGATCGAAACCA 59.178 47.619 21.31 14.39 0.00 3.67
5566 5801 2.579207 TCCTCATGTCGATCGAAACC 57.421 50.000 21.31 8.41 0.00 3.27
5567 5802 3.770666 TCTTCCTCATGTCGATCGAAAC 58.229 45.455 21.31 9.85 0.00 2.78
5568 5803 4.157840 TCTTCTTCCTCATGTCGATCGAAA 59.842 41.667 21.31 16.23 0.00 3.46
5569 5804 3.694566 TCTTCTTCCTCATGTCGATCGAA 59.305 43.478 21.31 10.78 0.00 3.71
5570 5805 3.065510 GTCTTCTTCCTCATGTCGATCGA 59.934 47.826 15.15 15.15 0.00 3.59
5571 5806 3.367607 GTCTTCTTCCTCATGTCGATCG 58.632 50.000 9.36 9.36 0.00 3.69
5572 5807 3.367607 CGTCTTCTTCCTCATGTCGATC 58.632 50.000 0.00 0.00 0.00 3.69
5573 5808 2.099921 CCGTCTTCTTCCTCATGTCGAT 59.900 50.000 0.00 0.00 0.00 3.59
5574 5809 1.472878 CCGTCTTCTTCCTCATGTCGA 59.527 52.381 0.00 0.00 0.00 4.20
5575 5810 1.202582 ACCGTCTTCTTCCTCATGTCG 59.797 52.381 0.00 0.00 0.00 4.35
5576 5811 2.611518 CACCGTCTTCTTCCTCATGTC 58.388 52.381 0.00 0.00 0.00 3.06
5577 5812 1.276421 CCACCGTCTTCTTCCTCATGT 59.724 52.381 0.00 0.00 0.00 3.21
5578 5813 1.550524 TCCACCGTCTTCTTCCTCATG 59.449 52.381 0.00 0.00 0.00 3.07
5579 5814 1.827969 CTCCACCGTCTTCTTCCTCAT 59.172 52.381 0.00 0.00 0.00 2.90
5580 5815 1.257743 CTCCACCGTCTTCTTCCTCA 58.742 55.000 0.00 0.00 0.00 3.86
5581 5816 0.108567 GCTCCACCGTCTTCTTCCTC 60.109 60.000 0.00 0.00 0.00 3.71
5582 5817 1.878656 CGCTCCACCGTCTTCTTCCT 61.879 60.000 0.00 0.00 0.00 3.36
5583 5818 1.446272 CGCTCCACCGTCTTCTTCC 60.446 63.158 0.00 0.00 0.00 3.46
5584 5819 0.456995 CTCGCTCCACCGTCTTCTTC 60.457 60.000 0.00 0.00 0.00 2.87
5585 5820 1.179814 ACTCGCTCCACCGTCTTCTT 61.180 55.000 0.00 0.00 0.00 2.52
5586 5821 1.604023 ACTCGCTCCACCGTCTTCT 60.604 57.895 0.00 0.00 0.00 2.85
5587 5822 1.444553 CACTCGCTCCACCGTCTTC 60.445 63.158 0.00 0.00 0.00 2.87
5588 5823 2.651361 CACTCGCTCCACCGTCTT 59.349 61.111 0.00 0.00 0.00 3.01
5589 5824 3.374402 CCACTCGCTCCACCGTCT 61.374 66.667 0.00 0.00 0.00 4.18
5593 5828 4.329545 TTGGCCACTCGCTCCACC 62.330 66.667 3.88 0.00 37.74 4.61
5594 5829 2.743928 CTTGGCCACTCGCTCCAC 60.744 66.667 3.88 0.00 37.74 4.02
5595 5830 2.731691 GAACTTGGCCACTCGCTCCA 62.732 60.000 3.88 0.00 37.74 3.86
5596 5831 2.032681 AACTTGGCCACTCGCTCC 59.967 61.111 3.88 0.00 37.74 4.70
5597 5832 1.301716 TGAACTTGGCCACTCGCTC 60.302 57.895 3.88 0.00 37.74 5.03
5598 5833 1.598130 GTGAACTTGGCCACTCGCT 60.598 57.895 3.88 0.00 37.74 4.93
5599 5834 2.617274 GGTGAACTTGGCCACTCGC 61.617 63.158 3.88 9.40 33.99 5.03
5600 5835 1.227823 TGGTGAACTTGGCCACTCG 60.228 57.895 3.88 0.00 33.99 4.18
5601 5836 0.108585 TCTGGTGAACTTGGCCACTC 59.891 55.000 3.88 2.85 33.99 3.51
5602 5837 0.179018 GTCTGGTGAACTTGGCCACT 60.179 55.000 3.88 0.00 33.99 4.00
5603 5838 0.465460 TGTCTGGTGAACTTGGCCAC 60.465 55.000 3.88 0.00 0.00 5.01
5604 5839 0.257328 TTGTCTGGTGAACTTGGCCA 59.743 50.000 0.00 0.00 0.00 5.36
5605 5840 0.954452 CTTGTCTGGTGAACTTGGCC 59.046 55.000 0.00 0.00 0.00 5.36
5606 5841 0.954452 CCTTGTCTGGTGAACTTGGC 59.046 55.000 0.00 0.00 0.00 4.52
5607 5842 2.104792 TCTCCTTGTCTGGTGAACTTGG 59.895 50.000 0.00 0.00 0.00 3.61
5608 5843 3.475566 TCTCCTTGTCTGGTGAACTTG 57.524 47.619 0.00 0.00 0.00 3.16
5609 5844 3.745797 GCTTCTCCTTGTCTGGTGAACTT 60.746 47.826 0.00 0.00 35.48 2.66
5610 5845 2.224402 GCTTCTCCTTGTCTGGTGAACT 60.224 50.000 0.00 0.00 35.48 3.01
5611 5846 2.147150 GCTTCTCCTTGTCTGGTGAAC 58.853 52.381 0.00 0.00 35.48 3.18
5612 5847 2.050144 AGCTTCTCCTTGTCTGGTGAA 58.950 47.619 0.00 0.00 37.29 3.18
5613 5848 1.722034 AGCTTCTCCTTGTCTGGTGA 58.278 50.000 0.00 0.00 0.00 4.02
5614 5849 2.149578 CAAGCTTCTCCTTGTCTGGTG 58.850 52.381 0.00 0.00 37.89 4.17
5615 5850 1.544314 GCAAGCTTCTCCTTGTCTGGT 60.544 52.381 0.00 0.00 43.17 4.00
5616 5851 1.163554 GCAAGCTTCTCCTTGTCTGG 58.836 55.000 0.00 0.00 43.17 3.86
5617 5852 1.888215 TGCAAGCTTCTCCTTGTCTG 58.112 50.000 0.00 0.00 43.17 3.51
5618 5853 2.434428 CATGCAAGCTTCTCCTTGTCT 58.566 47.619 0.00 0.00 43.17 3.41
5619 5854 1.471684 CCATGCAAGCTTCTCCTTGTC 59.528 52.381 0.00 0.00 43.17 3.18
5620 5855 1.074405 TCCATGCAAGCTTCTCCTTGT 59.926 47.619 0.00 0.00 43.17 3.16
5621 5856 1.471684 GTCCATGCAAGCTTCTCCTTG 59.528 52.381 0.00 0.00 43.88 3.61
5622 5857 1.353694 AGTCCATGCAAGCTTCTCCTT 59.646 47.619 0.00 0.00 0.00 3.36
5623 5858 0.990374 AGTCCATGCAAGCTTCTCCT 59.010 50.000 0.00 0.00 0.00 3.69
5624 5859 1.742268 GAAGTCCATGCAAGCTTCTCC 59.258 52.381 0.00 0.00 35.69 3.71
5625 5860 1.396301 CGAAGTCCATGCAAGCTTCTC 59.604 52.381 0.00 0.00 36.23 2.87
5626 5861 1.446907 CGAAGTCCATGCAAGCTTCT 58.553 50.000 0.00 0.00 36.23 2.85
5627 5862 0.179179 GCGAAGTCCATGCAAGCTTC 60.179 55.000 0.00 1.66 35.35 3.86
5628 5863 1.589716 GGCGAAGTCCATGCAAGCTT 61.590 55.000 0.00 0.00 0.00 3.74
5629 5864 2.042831 GGCGAAGTCCATGCAAGCT 61.043 57.895 0.00 0.00 0.00 3.74
5630 5865 0.744414 TAGGCGAAGTCCATGCAAGC 60.744 55.000 0.00 0.00 0.00 4.01
5631 5866 1.009829 GTAGGCGAAGTCCATGCAAG 58.990 55.000 0.00 0.00 0.00 4.01
5632 5867 0.323302 TGTAGGCGAAGTCCATGCAA 59.677 50.000 0.00 0.00 0.00 4.08
5633 5868 0.541392 ATGTAGGCGAAGTCCATGCA 59.459 50.000 0.00 0.00 0.00 3.96
5634 5869 0.940126 CATGTAGGCGAAGTCCATGC 59.060 55.000 0.00 0.00 0.00 4.06
5635 5870 0.940126 GCATGTAGGCGAAGTCCATG 59.060 55.000 0.00 0.00 36.77 3.66
5636 5871 3.386543 GCATGTAGGCGAAGTCCAT 57.613 52.632 0.00 0.00 0.00 3.41
5637 5872 4.932789 GCATGTAGGCGAAGTCCA 57.067 55.556 0.00 0.00 0.00 4.02
5645 5880 1.097547 ATGGAAGTGCGCATGTAGGC 61.098 55.000 15.91 0.00 0.00 3.93
5646 5881 0.940126 GATGGAAGTGCGCATGTAGG 59.060 55.000 15.91 0.00 0.00 3.18
5647 5882 1.863454 GAGATGGAAGTGCGCATGTAG 59.137 52.381 15.91 0.00 0.00 2.74
5648 5883 1.473257 GGAGATGGAAGTGCGCATGTA 60.473 52.381 15.91 0.00 0.00 2.29
5649 5884 0.745845 GGAGATGGAAGTGCGCATGT 60.746 55.000 15.91 3.90 0.00 3.21
5650 5885 0.745486 TGGAGATGGAAGTGCGCATG 60.745 55.000 15.91 0.00 0.00 4.06
5651 5886 0.035152 TTGGAGATGGAAGTGCGCAT 60.035 50.000 15.91 0.00 0.00 4.73
5652 5887 0.955428 GTTGGAGATGGAAGTGCGCA 60.955 55.000 5.66 5.66 0.00 6.09
5653 5888 0.674895 AGTTGGAGATGGAAGTGCGC 60.675 55.000 0.00 0.00 0.00 6.09
5654 5889 2.672961 TAGTTGGAGATGGAAGTGCG 57.327 50.000 0.00 0.00 0.00 5.34
5655 5890 4.414337 AGATAGTTGGAGATGGAAGTGC 57.586 45.455 0.00 0.00 0.00 4.40
5656 5891 4.574013 GCAAGATAGTTGGAGATGGAAGTG 59.426 45.833 0.00 0.00 0.00 3.16
5657 5892 4.472833 AGCAAGATAGTTGGAGATGGAAGT 59.527 41.667 0.00 0.00 0.00 3.01
5658 5893 5.033589 AGCAAGATAGTTGGAGATGGAAG 57.966 43.478 0.00 0.00 0.00 3.46
5659 5894 4.141620 GGAGCAAGATAGTTGGAGATGGAA 60.142 45.833 0.00 0.00 0.00 3.53
5660 5895 3.389329 GGAGCAAGATAGTTGGAGATGGA 59.611 47.826 0.00 0.00 0.00 3.41
5661 5896 3.135348 TGGAGCAAGATAGTTGGAGATGG 59.865 47.826 0.00 0.00 0.00 3.51
5662 5897 4.412796 TGGAGCAAGATAGTTGGAGATG 57.587 45.455 0.00 0.00 0.00 2.90
5663 5898 4.718774 TCTTGGAGCAAGATAGTTGGAGAT 59.281 41.667 0.00 0.00 44.27 2.75
5664 5899 4.096681 TCTTGGAGCAAGATAGTTGGAGA 58.903 43.478 0.00 0.00 44.27 3.71
5665 5900 4.478206 TCTTGGAGCAAGATAGTTGGAG 57.522 45.455 0.00 0.00 44.27 3.86
5674 5909 3.176411 TCCATCTCTTCTTGGAGCAAGA 58.824 45.455 0.00 0.00 46.93 3.02
5675 5910 3.623906 TCCATCTCTTCTTGGAGCAAG 57.376 47.619 0.00 0.00 42.25 4.01
5676 5911 4.330250 CTTTCCATCTCTTCTTGGAGCAA 58.670 43.478 0.00 0.00 42.73 3.91
5677 5912 3.307975 CCTTTCCATCTCTTCTTGGAGCA 60.308 47.826 0.00 0.00 42.73 4.26
5678 5913 3.277715 CCTTTCCATCTCTTCTTGGAGC 58.722 50.000 0.00 0.00 42.73 4.70
5679 5914 3.883669 CCCTTTCCATCTCTTCTTGGAG 58.116 50.000 0.00 0.00 42.73 3.86
5680 5915 2.025887 GCCCTTTCCATCTCTTCTTGGA 60.026 50.000 0.00 0.00 40.24 3.53
5681 5916 2.291153 TGCCCTTTCCATCTCTTCTTGG 60.291 50.000 0.00 0.00 0.00 3.61
5682 5917 3.077484 TGCCCTTTCCATCTCTTCTTG 57.923 47.619 0.00 0.00 0.00 3.02
5683 5918 3.181429 TGTTGCCCTTTCCATCTCTTCTT 60.181 43.478 0.00 0.00 0.00 2.52
5684 5919 2.376518 TGTTGCCCTTTCCATCTCTTCT 59.623 45.455 0.00 0.00 0.00 2.85
5685 5920 2.795329 TGTTGCCCTTTCCATCTCTTC 58.205 47.619 0.00 0.00 0.00 2.87
5686 5921 2.893489 GTTGTTGCCCTTTCCATCTCTT 59.107 45.455 0.00 0.00 0.00 2.85
5687 5922 2.158475 TGTTGTTGCCCTTTCCATCTCT 60.158 45.455 0.00 0.00 0.00 3.10
5688 5923 2.238521 TGTTGTTGCCCTTTCCATCTC 58.761 47.619 0.00 0.00 0.00 2.75
5689 5924 2.365293 GTTGTTGTTGCCCTTTCCATCT 59.635 45.455 0.00 0.00 0.00 2.90
5690 5925 2.102252 TGTTGTTGTTGCCCTTTCCATC 59.898 45.455 0.00 0.00 0.00 3.51
5691 5926 2.114616 TGTTGTTGTTGCCCTTTCCAT 58.885 42.857 0.00 0.00 0.00 3.41
5692 5927 1.561643 TGTTGTTGTTGCCCTTTCCA 58.438 45.000 0.00 0.00 0.00 3.53
5693 5928 2.102252 TCATGTTGTTGTTGCCCTTTCC 59.898 45.455 0.00 0.00 0.00 3.13
5694 5929 3.451141 TCATGTTGTTGTTGCCCTTTC 57.549 42.857 0.00 0.00 0.00 2.62
5695 5930 3.795877 CTTCATGTTGTTGTTGCCCTTT 58.204 40.909 0.00 0.00 0.00 3.11
5696 5931 2.483538 GCTTCATGTTGTTGTTGCCCTT 60.484 45.455 0.00 0.00 0.00 3.95
5697 5932 1.069049 GCTTCATGTTGTTGTTGCCCT 59.931 47.619 0.00 0.00 0.00 5.19
5698 5933 1.501169 GCTTCATGTTGTTGTTGCCC 58.499 50.000 0.00 0.00 0.00 5.36
5699 5934 1.130955 CGCTTCATGTTGTTGTTGCC 58.869 50.000 0.00 0.00 0.00 4.52
5700 5935 1.780860 GTCGCTTCATGTTGTTGTTGC 59.219 47.619 0.00 0.00 0.00 4.17
5701 5936 2.036217 CGTCGCTTCATGTTGTTGTTG 58.964 47.619 0.00 0.00 0.00 3.33
5702 5937 1.937223 TCGTCGCTTCATGTTGTTGTT 59.063 42.857 0.00 0.00 0.00 2.83
5703 5938 1.526887 CTCGTCGCTTCATGTTGTTGT 59.473 47.619 0.00 0.00 0.00 3.32
5704 5939 1.136252 CCTCGTCGCTTCATGTTGTTG 60.136 52.381 0.00 0.00 0.00 3.33
5705 5940 1.148310 CCTCGTCGCTTCATGTTGTT 58.852 50.000 0.00 0.00 0.00 2.83
5706 5941 0.317160 TCCTCGTCGCTTCATGTTGT 59.683 50.000 0.00 0.00 0.00 3.32
5707 5942 1.645034 ATCCTCGTCGCTTCATGTTG 58.355 50.000 0.00 0.00 0.00 3.33
5708 5943 2.002586 CAATCCTCGTCGCTTCATGTT 58.997 47.619 0.00 0.00 0.00 2.71
5709 5944 1.066858 ACAATCCTCGTCGCTTCATGT 60.067 47.619 0.00 0.00 0.00 3.21
5710 5945 1.645034 ACAATCCTCGTCGCTTCATG 58.355 50.000 0.00 0.00 0.00 3.07
5711 5946 2.002586 CAACAATCCTCGTCGCTTCAT 58.997 47.619 0.00 0.00 0.00 2.57
5712 5947 1.270094 ACAACAATCCTCGTCGCTTCA 60.270 47.619 0.00 0.00 0.00 3.02
5713 5948 1.429463 ACAACAATCCTCGTCGCTTC 58.571 50.000 0.00 0.00 0.00 3.86
5714 5949 1.531149 CAACAACAATCCTCGTCGCTT 59.469 47.619 0.00 0.00 0.00 4.68
5715 5950 1.148310 CAACAACAATCCTCGTCGCT 58.852 50.000 0.00 0.00 0.00 4.93
5716 5951 0.452784 GCAACAACAATCCTCGTCGC 60.453 55.000 0.00 0.00 0.00 5.19
5717 5952 0.165944 GGCAACAACAATCCTCGTCG 59.834 55.000 0.00 0.00 0.00 5.12
5735 5970 2.289002 GCTTCTTGCCGATGTATCTTGG 59.711 50.000 0.00 0.00 35.15 3.61
5736 5971 3.599046 GCTTCTTGCCGATGTATCTTG 57.401 47.619 0.00 0.00 35.15 3.02
5749 5984 2.436646 ATCACCCGCGGCTTCTTG 60.437 61.111 22.85 7.58 0.00 3.02
5750 5985 2.125106 GATCACCCGCGGCTTCTT 60.125 61.111 22.85 1.99 0.00 2.52
5751 5986 4.514577 CGATCACCCGCGGCTTCT 62.515 66.667 22.85 3.50 0.00 2.85
5757 5992 1.813753 ATGAAACCGATCACCCGCG 60.814 57.895 0.00 0.00 30.82 6.46
5758 5993 1.721487 CATGAAACCGATCACCCGC 59.279 57.895 0.00 0.00 30.82 6.13
5759 5994 1.714899 GGCATGAAACCGATCACCCG 61.715 60.000 0.00 0.00 30.82 5.28
5760 5995 1.384222 GGGCATGAAACCGATCACCC 61.384 60.000 0.00 0.00 30.92 4.61
5761 5996 0.394352 AGGGCATGAAACCGATCACC 60.394 55.000 0.00 0.00 30.82 4.02
5762 5997 1.017387 GAGGGCATGAAACCGATCAC 58.983 55.000 0.00 0.00 30.82 3.06
5763 5998 0.107214 GGAGGGCATGAAACCGATCA 60.107 55.000 0.00 0.00 0.00 2.92
5764 5999 0.181350 AGGAGGGCATGAAACCGATC 59.819 55.000 0.00 0.00 0.00 3.69
5765 6000 0.181350 GAGGAGGGCATGAAACCGAT 59.819 55.000 0.00 0.00 0.00 4.18
5766 6001 1.602237 GAGGAGGGCATGAAACCGA 59.398 57.895 0.00 0.00 0.00 4.69
5767 6002 1.452108 GGAGGAGGGCATGAAACCG 60.452 63.158 0.00 0.00 0.00 4.44
5768 6003 1.452108 CGGAGGAGGGCATGAAACC 60.452 63.158 0.00 0.00 0.00 3.27
5769 6004 4.225497 CGGAGGAGGGCATGAAAC 57.775 61.111 0.00 0.00 0.00 2.78
5782 6017 0.600255 GATCGCAACCATACCCGGAG 60.600 60.000 0.73 0.00 0.00 4.63
5783 6018 1.444250 GATCGCAACCATACCCGGA 59.556 57.895 0.73 0.00 0.00 5.14
5784 6019 1.954146 CGATCGCAACCATACCCGG 60.954 63.158 0.26 0.00 0.00 5.73
5785 6020 0.939577 CTCGATCGCAACCATACCCG 60.940 60.000 11.09 0.00 0.00 5.28
5786 6021 0.104304 ACTCGATCGCAACCATACCC 59.896 55.000 11.09 0.00 0.00 3.69
5787 6022 1.202371 TCACTCGATCGCAACCATACC 60.202 52.381 11.09 0.00 0.00 2.73
5788 6023 2.203800 TCACTCGATCGCAACCATAC 57.796 50.000 11.09 0.00 0.00 2.39
5789 6024 2.536365 GTTCACTCGATCGCAACCATA 58.464 47.619 11.09 0.00 0.00 2.74
5790 6025 1.359848 GTTCACTCGATCGCAACCAT 58.640 50.000 11.09 0.00 0.00 3.55
5791 6026 1.006825 CGTTCACTCGATCGCAACCA 61.007 55.000 11.09 0.00 0.00 3.67
5792 6027 1.683790 CCGTTCACTCGATCGCAACC 61.684 60.000 11.09 0.00 33.83 3.77
5793 6028 0.731514 TCCGTTCACTCGATCGCAAC 60.732 55.000 11.09 9.27 33.83 4.17
5794 6029 0.456142 CTCCGTTCACTCGATCGCAA 60.456 55.000 11.09 0.00 33.83 4.85
5795 6030 1.136774 CTCCGTTCACTCGATCGCA 59.863 57.895 11.09 0.00 33.83 5.10
5796 6031 1.586564 CCTCCGTTCACTCGATCGC 60.587 63.158 11.09 0.00 33.83 4.58
5797 6032 1.064296 CCCTCCGTTCACTCGATCG 59.936 63.158 9.36 9.36 34.74 3.69
5798 6033 1.437986 CCCCTCCGTTCACTCGATC 59.562 63.158 0.00 0.00 0.00 3.69
5799 6034 2.058595 CCCCCTCCGTTCACTCGAT 61.059 63.158 0.00 0.00 0.00 3.59
5800 6035 2.678934 CCCCCTCCGTTCACTCGA 60.679 66.667 0.00 0.00 0.00 4.04
5801 6036 2.995574 ACCCCCTCCGTTCACTCG 60.996 66.667 0.00 0.00 0.00 4.18
5802 6037 1.265454 ATCACCCCCTCCGTTCACTC 61.265 60.000 0.00 0.00 0.00 3.51
5803 6038 1.229529 ATCACCCCCTCCGTTCACT 60.230 57.895 0.00 0.00 0.00 3.41
5804 6039 1.078426 CATCACCCCCTCCGTTCAC 60.078 63.158 0.00 0.00 0.00 3.18
5805 6040 0.620410 ATCATCACCCCCTCCGTTCA 60.620 55.000 0.00 0.00 0.00 3.18
5806 6041 0.179045 CATCATCACCCCCTCCGTTC 60.179 60.000 0.00 0.00 0.00 3.95
5807 6042 1.635817 CCATCATCACCCCCTCCGTT 61.636 60.000 0.00 0.00 0.00 4.44
5808 6043 2.072487 CCATCATCACCCCCTCCGT 61.072 63.158 0.00 0.00 0.00 4.69
5809 6044 2.822637 CCCATCATCACCCCCTCCG 61.823 68.421 0.00 0.00 0.00 4.63
5810 6045 2.464403 CCCCATCATCACCCCCTCC 61.464 68.421 0.00 0.00 0.00 4.30
5811 6046 0.773700 ATCCCCATCATCACCCCCTC 60.774 60.000 0.00 0.00 0.00 4.30
5812 6047 1.070127 CATCCCCATCATCACCCCCT 61.070 60.000 0.00 0.00 0.00 4.79
5813 6048 1.067762 TCATCCCCATCATCACCCCC 61.068 60.000 0.00 0.00 0.00 5.40
5814 6049 1.078955 ATCATCCCCATCATCACCCC 58.921 55.000 0.00 0.00 0.00 4.95
5815 6050 3.372349 CCATATCATCCCCATCATCACCC 60.372 52.174 0.00 0.00 0.00 4.61
5816 6051 3.524789 TCCATATCATCCCCATCATCACC 59.475 47.826 0.00 0.00 0.00 4.02
5817 6052 4.226846 AGTCCATATCATCCCCATCATCAC 59.773 45.833 0.00 0.00 0.00 3.06
5818 6053 4.441757 AGTCCATATCATCCCCATCATCA 58.558 43.478 0.00 0.00 0.00 3.07
5819 6054 5.191426 CAAGTCCATATCATCCCCATCATC 58.809 45.833 0.00 0.00 0.00 2.92
5820 6055 4.017775 CCAAGTCCATATCATCCCCATCAT 60.018 45.833 0.00 0.00 0.00 2.45
5821 6056 3.331591 CCAAGTCCATATCATCCCCATCA 59.668 47.826 0.00 0.00 0.00 3.07
5822 6057 3.588842 TCCAAGTCCATATCATCCCCATC 59.411 47.826 0.00 0.00 0.00 3.51
5823 6058 3.612458 TCCAAGTCCATATCATCCCCAT 58.388 45.455 0.00 0.00 0.00 4.00
5824 6059 3.073411 TCCAAGTCCATATCATCCCCA 57.927 47.619 0.00 0.00 0.00 4.96
5825 6060 4.664688 AATCCAAGTCCATATCATCCCC 57.335 45.455 0.00 0.00 0.00 4.81
5826 6061 5.251700 ACCTAATCCAAGTCCATATCATCCC 59.748 44.000 0.00 0.00 0.00 3.85
5827 6062 6.013379 TCACCTAATCCAAGTCCATATCATCC 60.013 42.308 0.00 0.00 0.00 3.51
5828 6063 7.009179 TCACCTAATCCAAGTCCATATCATC 57.991 40.000 0.00 0.00 0.00 2.92
5829 6064 7.579940 ATCACCTAATCCAAGTCCATATCAT 57.420 36.000 0.00 0.00 0.00 2.45
5830 6065 7.072328 TCAATCACCTAATCCAAGTCCATATCA 59.928 37.037 0.00 0.00 0.00 2.15
5831 6066 7.453393 TCAATCACCTAATCCAAGTCCATATC 58.547 38.462 0.00 0.00 0.00 1.63
5832 6067 7.072961 ACTCAATCACCTAATCCAAGTCCATAT 59.927 37.037 0.00 0.00 0.00 1.78
5833 6068 6.386927 ACTCAATCACCTAATCCAAGTCCATA 59.613 38.462 0.00 0.00 0.00 2.74
5834 6069 5.192522 ACTCAATCACCTAATCCAAGTCCAT 59.807 40.000 0.00 0.00 0.00 3.41
5835 6070 4.536090 ACTCAATCACCTAATCCAAGTCCA 59.464 41.667 0.00 0.00 0.00 4.02
5836 6071 5.104259 ACTCAATCACCTAATCCAAGTCC 57.896 43.478 0.00 0.00 0.00 3.85
5837 6072 6.708054 CCATACTCAATCACCTAATCCAAGTC 59.292 42.308 0.00 0.00 0.00 3.01
5838 6073 6.595682 CCATACTCAATCACCTAATCCAAGT 58.404 40.000 0.00 0.00 0.00 3.16
5839 6074 5.471456 GCCATACTCAATCACCTAATCCAAG 59.529 44.000 0.00 0.00 0.00 3.61
5840 6075 5.104151 TGCCATACTCAATCACCTAATCCAA 60.104 40.000 0.00 0.00 0.00 3.53
5841 6076 4.411869 TGCCATACTCAATCACCTAATCCA 59.588 41.667 0.00 0.00 0.00 3.41
5842 6077 4.757149 GTGCCATACTCAATCACCTAATCC 59.243 45.833 0.00 0.00 0.00 3.01
5843 6078 5.237344 GTGTGCCATACTCAATCACCTAATC 59.763 44.000 0.00 0.00 0.00 1.75
5844 6079 5.126067 GTGTGCCATACTCAATCACCTAAT 58.874 41.667 0.00 0.00 0.00 1.73
5845 6080 4.019771 TGTGTGCCATACTCAATCACCTAA 60.020 41.667 0.00 0.00 30.42 2.69
5846 6081 3.517500 TGTGTGCCATACTCAATCACCTA 59.482 43.478 0.00 0.00 30.42 3.08
5847 6082 2.305635 TGTGTGCCATACTCAATCACCT 59.694 45.455 0.00 0.00 30.42 4.00
5848 6083 2.710377 TGTGTGCCATACTCAATCACC 58.290 47.619 0.00 0.00 30.42 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.