Multiple sequence alignment - TraesCS2A01G100300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G100300 chr2A 100.000 3242 0 0 1 3242 53292201 53288960 0.000000e+00 5987.0
1 TraesCS2A01G100300 chr2A 100.000 291 0 0 3558 3848 53288644 53288354 4.370000e-149 538.0
2 TraesCS2A01G100300 chr2A 92.754 138 10 0 2478 2615 53278321 53278184 2.340000e-47 200.0
3 TraesCS2A01G100300 chr2B 90.893 2207 114 36 726 2862 80538899 80536710 0.000000e+00 2881.0
4 TraesCS2A01G100300 chr2B 85.714 210 25 3 3562 3771 80534298 80534094 2.330000e-52 217.0
5 TraesCS2A01G100300 chr2B 98.276 58 1 0 3163 3220 80536727 80536670 6.800000e-18 102.0
6 TraesCS2A01G100300 chr2D 92.239 1907 95 22 988 2862 42729569 42731454 0.000000e+00 2652.0
7 TraesCS2A01G100300 chr2D 92.626 1329 70 19 1551 2862 52025176 52023859 0.000000e+00 1886.0
8 TraesCS2A01G100300 chr2D 89.263 801 35 18 726 1475 52025981 52025181 0.000000e+00 955.0
9 TraesCS2A01G100300 chr2D 93.793 290 15 3 3561 3848 52023753 52023465 2.120000e-117 433.0
10 TraesCS2A01G100300 chr2D 93.258 267 13 1 726 987 42728410 42728676 4.660000e-104 388.0
11 TraesCS2A01G100300 chr2D 90.580 276 23 2 3574 3848 42731591 42731864 2.830000e-96 363.0
12 TraesCS2A01G100300 chr6A 94.822 309 15 1 2857 3164 181909845 181910153 7.480000e-132 481.0
13 TraesCS2A01G100300 chr6A 94.156 308 16 2 2858 3164 22626314 22626620 5.820000e-128 468.0
14 TraesCS2A01G100300 chr3B 94.754 305 15 1 2861 3164 623667583 623667279 1.250000e-129 473.0
15 TraesCS2A01G100300 chr3B 94.426 305 15 2 2861 3163 766049401 766049705 5.820000e-128 468.0
16 TraesCS2A01G100300 chr3B 91.691 337 23 4 2847 3181 8462714 8463047 2.710000e-126 462.0
17 TraesCS2A01G100300 chr7A 94.463 307 16 1 2861 3166 92082238 92081932 4.500000e-129 472.0
18 TraesCS2A01G100300 chr6B 94.444 306 15 2 2861 3164 551769915 551770220 1.620000e-128 470.0
19 TraesCS2A01G100300 chr6B 93.631 314 16 3 2852 3164 12389113 12388803 2.090000e-127 466.0
20 TraesCS2A01G100300 chr5A 94.175 309 17 1 2856 3163 60443740 60444048 1.620000e-128 470.0
21 TraesCS2A01G100300 chr4A 90.596 319 26 2 245 562 30311275 30311590 1.650000e-113 420.0
22 TraesCS2A01G100300 chr4A 92.982 114 8 0 601 714 30312153 30312266 2.380000e-37 167.0
23 TraesCS2A01G100300 chr4A 100.000 29 0 0 576 604 30311820 30311848 2.000000e-03 54.7
24 TraesCS2A01G100300 chr5D 86.520 319 38 4 245 562 460214948 460215262 2.850000e-91 346.0
25 TraesCS2A01G100300 chr5D 100.000 28 0 0 640 667 390453311 390453284 7.000000e-03 52.8
26 TraesCS2A01G100300 chr6D 91.566 166 14 0 1 166 406654831 406654996 2.990000e-56 230.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G100300 chr2A 53288354 53292201 3847 True 3262.500000 5987 100.000000 1 3848 2 chr2A.!!$R2 3847
1 TraesCS2A01G100300 chr2B 80534094 80538899 4805 True 1066.666667 2881 91.627667 726 3771 3 chr2B.!!$R1 3045
2 TraesCS2A01G100300 chr2D 42728410 42731864 3454 False 1134.333333 2652 92.025667 726 3848 3 chr2D.!!$F1 3122
3 TraesCS2A01G100300 chr2D 52023465 52025981 2516 True 1091.333333 1886 91.894000 726 3848 3 chr2D.!!$R1 3122
4 TraesCS2A01G100300 chr4A 30311275 30312266 991 False 213.900000 420 94.526000 245 714 3 chr4A.!!$F1 469

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
389 391 0.030773 TGGCGATGCATCTCGTAGAC 59.969 55.000 23.73 10.98 40.73 2.59 F
569 571 0.174389 TCAGCTGGACGAAGATGAGC 59.826 55.000 15.13 0.00 37.66 4.26 F
570 572 0.175302 CAGCTGGACGAAGATGAGCT 59.825 55.000 5.57 0.00 40.67 4.09 F
715 1241 0.249120 TCGTACGACCGGGTCTTAGA 59.751 55.000 23.86 14.62 0.00 2.10 F
716 1242 1.134401 TCGTACGACCGGGTCTTAGAT 60.134 52.381 23.86 7.62 0.00 1.98 F
1201 2665 1.518133 GCTCGGCTGCTACTGTCAG 60.518 63.158 0.00 0.00 34.79 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2298 3796 0.322816 TGGCAGAGATCCAGGCAAAC 60.323 55.000 3.84 0.0 34.72 2.93 R
2329 3827 1.336148 CGCACCAACATGAAGCACATT 60.336 47.619 0.00 0.0 37.07 2.71 R
2334 3832 1.730547 GCACGCACCAACATGAAGC 60.731 57.895 0.00 0.0 0.00 3.86 R
2678 4179 0.546122 CCATTAGCCTGCACACCCTA 59.454 55.000 0.00 0.0 0.00 3.53 R
2700 4201 7.347252 AGTTCTGTACACTATGACTATCCAGA 58.653 38.462 0.00 0.0 0.00 3.86 R
3043 4579 0.028110 GATTCCGGCGATGTGCTTTC 59.972 55.000 9.30 0.0 45.43 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.645921 GCGGTGCTGCAACCCAAC 62.646 66.667 12.81 0.00 36.84 3.77
32 33 4.326766 CGGTGCTGCAACCCAACG 62.327 66.667 12.81 3.57 36.84 4.10
33 34 3.977244 GGTGCTGCAACCCAACGG 61.977 66.667 6.36 0.00 33.79 4.44
34 35 2.904866 GTGCTGCAACCCAACGGA 60.905 61.111 2.77 0.00 0.00 4.69
35 36 2.594303 TGCTGCAACCCAACGGAG 60.594 61.111 0.00 0.00 0.00 4.63
36 37 3.365265 GCTGCAACCCAACGGAGG 61.365 66.667 0.00 0.00 0.00 4.30
37 38 3.365265 CTGCAACCCAACGGAGGC 61.365 66.667 0.00 0.00 33.93 4.70
40 41 3.047877 CAACCCAACGGAGGCGAC 61.048 66.667 0.00 0.00 0.00 5.19
41 42 3.552384 AACCCAACGGAGGCGACA 61.552 61.111 0.00 0.00 0.00 4.35
42 43 3.819877 AACCCAACGGAGGCGACAC 62.820 63.158 0.00 0.00 0.00 3.67
43 44 4.308458 CCCAACGGAGGCGACACA 62.308 66.667 0.00 0.00 0.00 3.72
44 45 2.280524 CCAACGGAGGCGACACAA 60.281 61.111 0.00 0.00 0.00 3.33
45 46 2.604174 CCAACGGAGGCGACACAAC 61.604 63.158 0.00 0.00 0.00 3.32
46 47 1.885388 CAACGGAGGCGACACAACA 60.885 57.895 0.00 0.00 0.00 3.33
47 48 1.885850 AACGGAGGCGACACAACAC 60.886 57.895 0.00 0.00 0.00 3.32
48 49 3.403057 CGGAGGCGACACAACACG 61.403 66.667 0.00 0.00 0.00 4.49
54 55 3.403057 CGACACAACACGCGGGAG 61.403 66.667 19.19 10.15 0.00 4.30
55 56 3.041940 GACACAACACGCGGGAGG 61.042 66.667 19.19 9.28 0.00 4.30
56 57 3.509137 GACACAACACGCGGGAGGA 62.509 63.158 19.19 0.00 0.00 3.71
57 58 2.738521 CACAACACGCGGGAGGAG 60.739 66.667 19.19 3.64 0.00 3.69
58 59 4.003788 ACAACACGCGGGAGGAGG 62.004 66.667 19.19 1.06 0.00 4.30
72 73 4.521062 GAGGCGCCTGCTCGTCAT 62.521 66.667 38.41 6.10 42.25 3.06
73 74 4.087892 AGGCGCCTGCTCGTCATT 62.088 61.111 32.33 0.00 42.25 2.57
74 75 3.869272 GGCGCCTGCTCGTCATTG 61.869 66.667 22.15 0.00 42.25 2.82
75 76 4.527157 GCGCCTGCTCGTCATTGC 62.527 66.667 0.00 0.00 38.39 3.56
76 77 2.816958 CGCCTGCTCGTCATTGCT 60.817 61.111 0.00 0.00 0.00 3.91
77 78 2.789917 GCCTGCTCGTCATTGCTG 59.210 61.111 0.00 0.00 0.00 4.41
78 79 2.789917 CCTGCTCGTCATTGCTGC 59.210 61.111 0.00 0.00 0.00 5.25
79 80 2.758089 CCTGCTCGTCATTGCTGCC 61.758 63.158 0.00 0.00 0.00 4.85
80 81 3.092192 CTGCTCGTCATTGCTGCCG 62.092 63.158 0.00 0.00 0.00 5.69
81 82 3.869272 GCTCGTCATTGCTGCCGG 61.869 66.667 0.00 0.00 0.00 6.13
82 83 3.869272 CTCGTCATTGCTGCCGGC 61.869 66.667 22.73 22.73 42.22 6.13
85 86 3.204827 GTCATTGCTGCCGGCGAT 61.205 61.111 23.90 10.29 45.31 4.58
105 106 4.166011 GATGCCGCGCTTGACCAC 62.166 66.667 5.56 0.00 0.00 4.16
111 112 3.712881 GCGCTTGACCACGACCAC 61.713 66.667 0.00 0.00 0.00 4.16
112 113 3.041940 CGCTTGACCACGACCACC 61.042 66.667 0.00 0.00 0.00 4.61
113 114 3.041940 GCTTGACCACGACCACCG 61.042 66.667 0.00 0.00 45.44 4.94
114 115 2.357034 CTTGACCACGACCACCGG 60.357 66.667 0.00 0.00 43.93 5.28
115 116 3.155861 TTGACCACGACCACCGGT 61.156 61.111 0.00 0.00 43.93 5.28
116 117 3.448533 TTGACCACGACCACCGGTG 62.449 63.158 28.26 28.26 43.93 4.94
117 118 3.920196 GACCACGACCACCGGTGT 61.920 66.667 31.80 20.22 43.93 4.16
118 119 3.450043 GACCACGACCACCGGTGTT 62.450 63.158 31.80 20.57 43.93 3.32
119 120 2.970324 CCACGACCACCGGTGTTG 60.970 66.667 31.80 23.71 43.93 3.33
120 121 2.202960 CACGACCACCGGTGTTGT 60.203 61.111 31.80 23.50 43.93 3.32
121 122 2.202960 ACGACCACCGGTGTTGTG 60.203 61.111 31.80 19.28 43.93 3.33
122 123 2.107343 CGACCACCGGTGTTGTGA 59.893 61.111 31.80 0.00 35.25 3.58
123 124 2.241880 CGACCACCGGTGTTGTGAC 61.242 63.158 31.80 15.96 35.25 3.67
124 125 2.202960 ACCACCGGTGTTGTGACG 60.203 61.111 31.80 17.46 35.74 4.35
125 126 3.645975 CCACCGGTGTTGTGACGC 61.646 66.667 31.80 0.00 35.74 5.19
126 127 3.995669 CACCGGTGTTGTGACGCG 61.996 66.667 26.95 3.53 37.15 6.01
160 161 4.403137 GCCGTGCTGCGATGCAAA 62.403 61.111 4.40 0.00 45.12 3.68
161 162 2.486504 CCGTGCTGCGATGCAAAT 59.513 55.556 4.40 0.00 45.12 2.32
162 163 1.584483 CCGTGCTGCGATGCAAATC 60.584 57.895 4.40 0.00 45.12 2.17
163 164 1.931137 CGTGCTGCGATGCAAATCG 60.931 57.895 5.34 5.34 45.12 3.34
164 165 1.135315 GTGCTGCGATGCAAATCGT 59.865 52.632 11.09 0.00 45.12 3.73
165 166 0.858961 GTGCTGCGATGCAAATCGTC 60.859 55.000 11.09 4.77 45.12 4.20
166 167 1.297893 GCTGCGATGCAAATCGTCC 60.298 57.895 11.09 0.00 45.11 4.79
167 168 1.980951 GCTGCGATGCAAATCGTCCA 61.981 55.000 11.09 1.53 45.11 4.02
168 169 0.247814 CTGCGATGCAAATCGTCCAC 60.248 55.000 11.09 0.00 45.11 4.02
169 170 1.296867 GCGATGCAAATCGTCCACG 60.297 57.895 11.09 0.00 45.11 4.94
185 186 4.544762 CGACAACCGTCATCGACA 57.455 55.556 0.00 0.00 42.74 4.35
186 187 2.059575 CGACAACCGTCATCGACAC 58.940 57.895 0.00 0.00 42.74 3.67
187 188 1.342082 CGACAACCGTCATCGACACC 61.342 60.000 0.00 0.00 42.74 4.16
188 189 1.005394 ACAACCGTCATCGACACCC 60.005 57.895 0.00 0.00 39.71 4.61
189 190 2.092291 CAACCGTCATCGACACCCG 61.092 63.158 0.00 0.00 39.71 5.28
190 191 3.927163 AACCGTCATCGACACCCGC 62.927 63.158 0.00 0.00 39.71 6.13
191 192 4.129737 CCGTCATCGACACCCGCT 62.130 66.667 0.00 0.00 39.71 5.52
192 193 2.880879 CGTCATCGACACCCGCTG 60.881 66.667 0.00 0.00 39.71 5.18
193 194 3.188786 GTCATCGACACCCGCTGC 61.189 66.667 0.00 0.00 34.67 5.25
194 195 3.690280 TCATCGACACCCGCTGCA 61.690 61.111 0.00 0.00 34.67 4.41
195 196 2.512286 CATCGACACCCGCTGCAT 60.512 61.111 0.00 0.00 38.37 3.96
196 197 1.227234 CATCGACACCCGCTGCATA 60.227 57.895 0.00 0.00 38.37 3.14
197 198 1.068083 ATCGACACCCGCTGCATAG 59.932 57.895 0.00 0.00 38.37 2.23
198 199 2.978452 ATCGACACCCGCTGCATAGC 62.978 60.000 0.00 0.00 46.62 2.97
208 209 4.897357 TGCATAGCAGCTCCGGCG 62.897 66.667 0.00 0.00 44.37 6.46
209 210 4.592192 GCATAGCAGCTCCGGCGA 62.592 66.667 9.30 0.00 44.37 5.54
210 211 2.106938 CATAGCAGCTCCGGCGAA 59.893 61.111 9.30 0.00 44.37 4.70
211 212 1.953138 CATAGCAGCTCCGGCGAAG 60.953 63.158 9.30 0.00 44.37 3.79
212 213 2.427245 ATAGCAGCTCCGGCGAAGT 61.427 57.895 9.30 0.00 44.37 3.01
213 214 2.356818 ATAGCAGCTCCGGCGAAGTC 62.357 60.000 9.30 0.00 44.37 3.01
224 225 3.175240 CGAAGTCGACGGCTGCTG 61.175 66.667 10.46 6.98 43.02 4.41
225 226 2.258591 GAAGTCGACGGCTGCTGA 59.741 61.111 16.72 0.00 0.00 4.26
226 227 1.372997 GAAGTCGACGGCTGCTGAA 60.373 57.895 16.72 0.00 0.00 3.02
227 228 1.347817 GAAGTCGACGGCTGCTGAAG 61.348 60.000 16.72 8.45 0.00 3.02
228 229 2.049063 GTCGACGGCTGCTGAAGT 60.049 61.111 16.72 2.86 0.00 3.01
229 230 2.049156 TCGACGGCTGCTGAAGTG 60.049 61.111 16.72 1.76 0.00 3.16
230 231 3.782244 CGACGGCTGCTGAAGTGC 61.782 66.667 16.72 0.00 0.00 4.40
231 232 2.666190 GACGGCTGCTGAAGTGCA 60.666 61.111 16.72 0.00 41.05 4.57
232 233 2.959357 GACGGCTGCTGAAGTGCAC 61.959 63.158 16.72 9.40 38.12 4.57
233 234 3.730761 CGGCTGCTGAAGTGCACC 61.731 66.667 14.63 0.00 38.12 5.01
234 235 2.282040 GGCTGCTGAAGTGCACCT 60.282 61.111 14.63 0.00 38.12 4.00
235 236 2.331132 GGCTGCTGAAGTGCACCTC 61.331 63.158 14.63 11.38 38.12 3.85
236 237 2.331132 GCTGCTGAAGTGCACCTCC 61.331 63.158 14.63 3.35 38.12 4.30
237 238 2.031012 TGCTGAAGTGCACCTCCG 59.969 61.111 14.63 7.95 38.12 4.63
238 239 2.743928 GCTGAAGTGCACCTCCGG 60.744 66.667 14.63 9.10 0.00 5.14
239 240 2.743928 CTGAAGTGCACCTCCGGC 60.744 66.667 14.63 0.00 0.00 6.13
240 241 4.680237 TGAAGTGCACCTCCGGCG 62.680 66.667 14.63 0.00 0.00 6.46
247 248 2.267642 CACCTCCGGCGGAATCAA 59.732 61.111 30.59 7.15 0.00 2.57
250 251 1.153168 CCTCCGGCGGAATCAATGT 60.153 57.895 30.59 0.00 0.00 2.71
264 265 0.247185 CAATGTTGGGCGCAATTCCT 59.753 50.000 19.93 2.23 0.00 3.36
267 268 1.102154 TGTTGGGCGCAATTCCTATG 58.898 50.000 19.93 0.00 0.00 2.23
280 281 0.744874 TCCTATGCTCGTGGCTACAC 59.255 55.000 0.00 0.00 44.23 2.90
281 282 0.249489 CCTATGCTCGTGGCTACACC 60.249 60.000 0.00 0.00 44.86 4.16
310 311 1.807165 GCGACGAGCTCTTGCATCA 60.807 57.895 12.85 0.00 44.04 3.07
359 360 1.832912 GGATCTCGTCAGCCCCATT 59.167 57.895 0.00 0.00 0.00 3.16
365 367 2.268920 GTCAGCCCCATTCTCGCA 59.731 61.111 0.00 0.00 0.00 5.10
368 370 3.720601 AGCCCCATTCTCGCAGCA 61.721 61.111 0.00 0.00 0.00 4.41
372 374 1.731433 CCCCATTCTCGCAGCAATGG 61.731 60.000 13.77 13.77 46.10 3.16
386 388 1.501169 CAATGGCGATGCATCTCGTA 58.499 50.000 23.73 9.59 40.73 3.43
389 391 0.030773 TGGCGATGCATCTCGTAGAC 59.969 55.000 23.73 10.98 40.73 2.59
484 486 4.367023 GGCACCACCGACGCACTA 62.367 66.667 0.00 0.00 0.00 2.74
514 516 0.178068 ATGGTTAAGCATCTCGCCGT 59.822 50.000 14.31 0.00 44.04 5.68
526 528 0.935831 CTCGCCGTCGTTGTGTTACA 60.936 55.000 0.00 0.00 36.96 2.41
528 530 1.210545 CGCCGTCGTTGTGTTACACT 61.211 55.000 16.79 0.00 35.11 3.55
538 540 2.403259 TGTGTTACACTGATGCGTCTG 58.597 47.619 16.79 10.96 35.11 3.51
539 541 2.223947 TGTGTTACACTGATGCGTCTGT 60.224 45.455 16.79 12.28 37.04 3.41
562 564 2.111999 CTGGGGTTCAGCTGGACGAA 62.112 60.000 19.01 6.00 36.60 3.85
563 565 1.376037 GGGGTTCAGCTGGACGAAG 60.376 63.158 19.01 0.00 0.00 3.79
564 566 1.671742 GGGTTCAGCTGGACGAAGA 59.328 57.895 19.01 0.00 0.00 2.87
565 567 0.250513 GGGTTCAGCTGGACGAAGAT 59.749 55.000 19.01 0.00 0.00 2.40
566 568 1.363744 GGTTCAGCTGGACGAAGATG 58.636 55.000 19.01 0.00 34.85 2.90
567 569 1.066858 GGTTCAGCTGGACGAAGATGA 60.067 52.381 19.01 0.00 40.67 2.92
568 570 2.266554 GTTCAGCTGGACGAAGATGAG 58.733 52.381 15.13 0.00 43.03 2.90
569 571 0.174389 TCAGCTGGACGAAGATGAGC 59.826 55.000 15.13 0.00 37.66 4.26
570 572 0.175302 CAGCTGGACGAAGATGAGCT 59.825 55.000 5.57 0.00 40.67 4.09
572 574 6.931418 TTCAGCTGGACGAAGATGAGCTTC 62.931 50.000 15.13 0.00 43.03 3.86
614 1140 2.283460 AAGCTGAAAGGGCAGGGC 60.283 61.111 0.00 0.00 36.41 5.19
668 1194 3.758554 AGATTTGTATTGCCAGGTGTCAC 59.241 43.478 0.00 0.00 0.00 3.67
677 1203 0.606401 CCAGGTGTCACGCAAGGAAT 60.606 55.000 0.00 0.00 46.39 3.01
678 1204 0.798776 CAGGTGTCACGCAAGGAATC 59.201 55.000 0.00 0.00 46.39 2.52
714 1240 1.086696 TTCGTACGACCGGGTCTTAG 58.913 55.000 23.86 11.77 0.00 2.18
715 1241 0.249120 TCGTACGACCGGGTCTTAGA 59.751 55.000 23.86 14.62 0.00 2.10
716 1242 1.134401 TCGTACGACCGGGTCTTAGAT 60.134 52.381 23.86 7.62 0.00 1.98
717 1243 1.672881 CGTACGACCGGGTCTTAGATT 59.327 52.381 23.86 4.87 0.00 2.40
718 1244 2.098117 CGTACGACCGGGTCTTAGATTT 59.902 50.000 23.86 3.28 0.00 2.17
719 1245 3.428045 CGTACGACCGGGTCTTAGATTTT 60.428 47.826 23.86 2.02 0.00 1.82
720 1246 3.242549 ACGACCGGGTCTTAGATTTTC 57.757 47.619 23.86 0.00 0.00 2.29
721 1247 2.830321 ACGACCGGGTCTTAGATTTTCT 59.170 45.455 23.86 0.00 0.00 2.52
722 1248 3.260128 ACGACCGGGTCTTAGATTTTCTT 59.740 43.478 23.86 0.00 0.00 2.52
723 1249 3.864003 CGACCGGGTCTTAGATTTTCTTC 59.136 47.826 23.86 0.00 0.00 2.87
724 1250 4.190001 GACCGGGTCTTAGATTTTCTTCC 58.810 47.826 19.92 0.00 0.00 3.46
1024 2484 2.885644 CCGATCGTTCACGGGCTG 60.886 66.667 15.09 0.00 44.59 4.85
1055 2515 1.936880 CTCGCAGATCTCGTGTCGC 60.937 63.158 12.27 3.11 33.89 5.19
1198 2662 4.135153 CCGCTCGGCTGCTACTGT 62.135 66.667 0.00 0.00 0.00 3.55
1201 2665 1.518133 GCTCGGCTGCTACTGTCAG 60.518 63.158 0.00 0.00 34.79 3.51
1524 3005 2.827959 GAATTGTTCCGTCCGCGTGC 62.828 60.000 4.92 0.00 36.15 5.34
1979 3464 2.121538 CACCCGATCGGAGCTCTGA 61.122 63.158 35.42 27.03 37.50 3.27
2031 3524 2.769617 GATCGCGTCGTGTTGGTG 59.230 61.111 5.77 0.00 0.00 4.17
2219 3712 1.539929 GGGAGTGGCTCATCAAGATCG 60.540 57.143 0.00 0.00 31.08 3.69
2298 3796 1.800586 CCAGACATGAACAGGAACACG 59.199 52.381 0.00 0.00 0.00 4.49
2329 3827 3.076079 TCTCTGCCATTTTGCTCATGA 57.924 42.857 0.00 0.00 0.00 3.07
2334 3832 3.591023 TGCCATTTTGCTCATGAATGTG 58.409 40.909 0.00 0.00 0.00 3.21
2463 3964 4.699522 GCGCAGGACCGGAACCTT 62.700 66.667 18.98 5.69 35.35 3.50
2678 4179 4.070552 GTCGGGCTGCGAGAAGGT 62.071 66.667 0.00 0.00 0.00 3.50
2700 4201 1.686115 GGGTGTGCAGGCTAATGGATT 60.686 52.381 0.00 0.00 0.00 3.01
2729 4265 9.069082 GGATAGTCATAGTGTACAGAACTACAT 57.931 37.037 0.00 0.00 33.11 2.29
2730 4266 9.885934 GATAGTCATAGTGTACAGAACTACATG 57.114 37.037 0.00 0.00 33.11 3.21
2731 4267 7.939784 AGTCATAGTGTACAGAACTACATGA 57.060 36.000 0.00 0.00 33.11 3.07
2732 4268 7.990917 AGTCATAGTGTACAGAACTACATGAG 58.009 38.462 0.00 0.00 33.11 2.90
2733 4269 7.067615 AGTCATAGTGTACAGAACTACATGAGG 59.932 40.741 0.00 0.00 33.11 3.86
2734 4270 7.067129 GTCATAGTGTACAGAACTACATGAGGA 59.933 40.741 0.00 0.00 33.11 3.71
2735 4271 7.614192 TCATAGTGTACAGAACTACATGAGGAA 59.386 37.037 0.00 0.00 33.11 3.36
2736 4272 6.665992 AGTGTACAGAACTACATGAGGAAA 57.334 37.500 0.00 0.00 0.00 3.13
2737 4273 6.456501 AGTGTACAGAACTACATGAGGAAAC 58.543 40.000 0.00 0.00 0.00 2.78
2739 4275 6.929606 GTGTACAGAACTACATGAGGAAACTT 59.070 38.462 0.00 0.00 44.43 2.66
2740 4276 7.441458 GTGTACAGAACTACATGAGGAAACTTT 59.559 37.037 0.00 0.00 44.43 2.66
2741 4277 7.990886 TGTACAGAACTACATGAGGAAACTTTT 59.009 33.333 0.00 0.00 44.43 2.27
2742 4278 7.881775 ACAGAACTACATGAGGAAACTTTTT 57.118 32.000 0.00 0.00 44.43 1.94
2789 4325 6.260936 ACTGTAGGAAACATGTTGTTCTTCTG 59.739 38.462 12.82 12.80 40.14 3.02
2792 4328 5.894807 AGGAAACATGTTGTTCTTCTGTTG 58.105 37.500 12.82 0.00 40.14 3.33
2813 4349 1.451028 AGCAGCGGGATTCTTGCTC 60.451 57.895 1.06 0.00 36.69 4.26
2862 4398 6.686630 TCACGCCATGTTCTATTTTTCATTT 58.313 32.000 0.00 0.00 0.00 2.32
2863 4399 7.151308 TCACGCCATGTTCTATTTTTCATTTT 58.849 30.769 0.00 0.00 0.00 1.82
2864 4400 7.655328 TCACGCCATGTTCTATTTTTCATTTTT 59.345 29.630 0.00 0.00 0.00 1.94
2888 4424 8.568732 TTTTTAGCATAAGTACAAACACAAGC 57.431 30.769 0.00 0.00 0.00 4.01
2889 4425 4.404507 AGCATAAGTACAAACACAAGCG 57.595 40.909 0.00 0.00 0.00 4.68
2890 4426 2.908626 GCATAAGTACAAACACAAGCGC 59.091 45.455 0.00 0.00 0.00 5.92
2891 4427 3.364964 GCATAAGTACAAACACAAGCGCT 60.365 43.478 2.64 2.64 0.00 5.92
2892 4428 4.394795 CATAAGTACAAACACAAGCGCTC 58.605 43.478 12.06 0.00 0.00 5.03
2893 4429 1.948104 AGTACAAACACAAGCGCTCA 58.052 45.000 12.06 0.00 0.00 4.26
2894 4430 2.494059 AGTACAAACACAAGCGCTCAT 58.506 42.857 12.06 0.00 0.00 2.90
2895 4431 3.659786 AGTACAAACACAAGCGCTCATA 58.340 40.909 12.06 0.00 0.00 2.15
2896 4432 4.253685 AGTACAAACACAAGCGCTCATAT 58.746 39.130 12.06 0.00 0.00 1.78
2897 4433 5.416083 AGTACAAACACAAGCGCTCATATA 58.584 37.500 12.06 0.00 0.00 0.86
2898 4434 4.600012 ACAAACACAAGCGCTCATATAC 57.400 40.909 12.06 0.00 0.00 1.47
2899 4435 4.000325 ACAAACACAAGCGCTCATATACA 59.000 39.130 12.06 0.00 0.00 2.29
2900 4436 4.142902 ACAAACACAAGCGCTCATATACAC 60.143 41.667 12.06 0.00 0.00 2.90
2901 4437 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
2902 4438 2.193447 CACAAGCGCTCATATACACGT 58.807 47.619 12.06 0.00 0.00 4.49
2903 4439 2.034591 CACAAGCGCTCATATACACGTG 60.035 50.000 12.06 15.48 0.00 4.49
2904 4440 1.071239 CAAGCGCTCATATACACGTGC 60.071 52.381 17.22 0.00 0.00 5.34
2905 4441 0.102300 AGCGCTCATATACACGTGCA 59.898 50.000 17.22 2.06 35.49 4.57
2906 4442 1.139989 GCGCTCATATACACGTGCAT 58.860 50.000 17.22 11.52 33.41 3.96
2907 4443 2.030274 AGCGCTCATATACACGTGCATA 60.030 45.455 17.22 13.68 35.49 3.14
2908 4444 2.090658 GCGCTCATATACACGTGCATAC 59.909 50.000 17.22 0.00 33.41 2.39
2909 4445 3.305110 CGCTCATATACACGTGCATACA 58.695 45.455 17.22 2.39 0.00 2.29
2910 4446 3.119628 CGCTCATATACACGTGCATACAC 59.880 47.826 17.22 2.67 43.76 2.90
2911 4447 4.299155 GCTCATATACACGTGCATACACT 58.701 43.478 17.22 0.00 45.10 3.55
2912 4448 4.383052 GCTCATATACACGTGCATACACTC 59.617 45.833 17.22 0.27 45.10 3.51
2913 4449 5.508200 TCATATACACGTGCATACACTCA 57.492 39.130 17.22 0.00 45.10 3.41
2914 4450 6.084326 TCATATACACGTGCATACACTCAT 57.916 37.500 17.22 0.00 45.10 2.90
2915 4451 6.149633 TCATATACACGTGCATACACTCATC 58.850 40.000 17.22 0.00 45.10 2.92
2916 4452 2.010145 ACACGTGCATACACTCATCC 57.990 50.000 17.22 0.00 45.10 3.51
2917 4453 1.290203 CACGTGCATACACTCATCCC 58.710 55.000 0.82 0.00 45.10 3.85
2918 4454 1.134699 CACGTGCATACACTCATCCCT 60.135 52.381 0.82 0.00 45.10 4.20
2919 4455 2.100749 CACGTGCATACACTCATCCCTA 59.899 50.000 0.82 0.00 45.10 3.53
2920 4456 2.965831 ACGTGCATACACTCATCCCTAT 59.034 45.455 0.00 0.00 45.10 2.57
2921 4457 3.243873 ACGTGCATACACTCATCCCTATG 60.244 47.826 0.00 0.00 45.10 2.23
2922 4458 3.005791 CGTGCATACACTCATCCCTATGA 59.994 47.826 0.00 0.00 45.10 2.15
2923 4459 4.501400 CGTGCATACACTCATCCCTATGAA 60.501 45.833 0.00 0.00 45.10 2.57
2924 4460 5.555017 GTGCATACACTCATCCCTATGAAT 58.445 41.667 0.00 0.00 41.57 2.57
2925 4461 5.410746 GTGCATACACTCATCCCTATGAATG 59.589 44.000 0.00 0.00 43.41 2.67
2926 4462 4.394300 GCATACACTCATCCCTATGAATGC 59.606 45.833 6.88 6.88 41.91 3.56
2927 4463 5.554070 CATACACTCATCCCTATGAATGCA 58.446 41.667 0.00 0.00 41.91 3.96
2928 4464 3.813443 ACACTCATCCCTATGAATGCAC 58.187 45.455 0.00 0.00 41.91 4.57
2929 4465 3.200605 ACACTCATCCCTATGAATGCACA 59.799 43.478 0.00 0.00 41.91 4.57
2930 4466 3.562973 CACTCATCCCTATGAATGCACAC 59.437 47.826 0.00 0.00 41.57 3.82
2931 4467 3.200605 ACTCATCCCTATGAATGCACACA 59.799 43.478 0.00 0.00 41.57 3.72
2932 4468 3.544684 TCATCCCTATGAATGCACACAC 58.455 45.455 0.00 0.00 39.20 3.82
2933 4469 2.022764 TCCCTATGAATGCACACACG 57.977 50.000 0.00 0.00 0.00 4.49
2934 4470 0.378257 CCCTATGAATGCACACACGC 59.622 55.000 0.00 0.00 0.00 5.34
2936 4472 1.202065 CCTATGAATGCACACACGCAC 60.202 52.381 0.00 0.00 46.56 5.34
2937 4473 1.464219 CTATGAATGCACACACGCACA 59.536 47.619 0.00 0.00 46.56 4.57
2938 4474 0.040157 ATGAATGCACACACGCACAC 60.040 50.000 0.00 0.00 46.56 3.82
2939 4475 1.370414 GAATGCACACACGCACACC 60.370 57.895 0.00 0.00 46.56 4.16
2940 4476 2.731587 GAATGCACACACGCACACCC 62.732 60.000 0.00 0.00 46.56 4.61
2941 4477 3.772853 ATGCACACACGCACACCCT 62.773 57.895 0.00 0.00 46.56 4.34
2942 4478 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
2943 4479 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
2944 4480 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
2945 4481 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
2946 4482 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
2947 4483 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
2948 4484 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
2949 4485 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
2950 4486 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
2951 4487 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
2952 4488 1.209621 GCACACCCTACCCCTATGAA 58.790 55.000 0.00 0.00 0.00 2.57
2953 4489 1.134189 GCACACCCTACCCCTATGAAC 60.134 57.143 0.00 0.00 0.00 3.18
2954 4490 2.193127 CACACCCTACCCCTATGAACA 58.807 52.381 0.00 0.00 0.00 3.18
2955 4491 2.093128 CACACCCTACCCCTATGAACAC 60.093 54.545 0.00 0.00 0.00 3.32
2956 4492 1.489230 CACCCTACCCCTATGAACACC 59.511 57.143 0.00 0.00 0.00 4.16
2957 4493 1.368558 ACCCTACCCCTATGAACACCT 59.631 52.381 0.00 0.00 0.00 4.00
2958 4494 2.047830 CCCTACCCCTATGAACACCTC 58.952 57.143 0.00 0.00 0.00 3.85
2959 4495 2.047830 CCTACCCCTATGAACACCTCC 58.952 57.143 0.00 0.00 0.00 4.30
2960 4496 1.687123 CTACCCCTATGAACACCTCCG 59.313 57.143 0.00 0.00 0.00 4.63
2961 4497 0.042131 ACCCCTATGAACACCTCCGA 59.958 55.000 0.00 0.00 0.00 4.55
2962 4498 0.753262 CCCCTATGAACACCTCCGAG 59.247 60.000 0.00 0.00 0.00 4.63
2963 4499 1.688311 CCCCTATGAACACCTCCGAGA 60.688 57.143 0.00 0.00 0.00 4.04
2964 4500 2.108168 CCCTATGAACACCTCCGAGAA 58.892 52.381 0.00 0.00 0.00 2.87
2965 4501 2.500098 CCCTATGAACACCTCCGAGAAA 59.500 50.000 0.00 0.00 0.00 2.52
2966 4502 3.522553 CCTATGAACACCTCCGAGAAAC 58.477 50.000 0.00 0.00 0.00 2.78
2967 4503 3.195825 CCTATGAACACCTCCGAGAAACT 59.804 47.826 0.00 0.00 0.00 2.66
2968 4504 2.526304 TGAACACCTCCGAGAAACTG 57.474 50.000 0.00 0.00 0.00 3.16
2969 4505 2.036387 TGAACACCTCCGAGAAACTGA 58.964 47.619 0.00 0.00 0.00 3.41
2970 4506 2.035961 TGAACACCTCCGAGAAACTGAG 59.964 50.000 0.00 0.00 0.00 3.35
2971 4507 0.318762 ACACCTCCGAGAAACTGAGC 59.681 55.000 0.00 0.00 0.00 4.26
2972 4508 0.390472 CACCTCCGAGAAACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
2973 4509 1.153745 CCTCCGAGAAACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
2974 4510 1.153745 CTCCGAGAAACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
2975 4511 2.815647 CCGAGAAACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
2976 4512 2.048222 CGAGAAACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
2977 4513 1.448540 CGAGAAACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
2978 4514 0.179111 CGAGAAACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
2979 4515 1.539065 CGAGAAACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
2980 4516 2.139118 GAGAAACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
2981 4517 1.486310 AGAAACTGAGCCGGCATATCA 59.514 47.619 31.54 22.44 0.00 2.15
2982 4518 2.105477 AGAAACTGAGCCGGCATATCAT 59.895 45.455 31.54 10.64 0.00 2.45
2983 4519 2.175878 AACTGAGCCGGCATATCATC 57.824 50.000 31.54 16.99 0.00 2.92
2984 4520 1.346062 ACTGAGCCGGCATATCATCT 58.654 50.000 31.54 4.27 0.00 2.90
2985 4521 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
2986 4522 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
2987 4523 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
2988 4524 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
2989 4525 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
2990 4526 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
2991 4527 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
2992 4528 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
2993 4529 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
2994 4530 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
2995 4531 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
2996 4532 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
2997 4533 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
2998 4534 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
2999 4535 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
3000 4536 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
3001 4537 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
3002 4538 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
3003 4539 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
3004 4540 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
3005 4541 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
3006 4542 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
3007 4543 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
3020 4556 2.099831 CGTAGGTGCCTCGTCGTC 59.900 66.667 0.00 0.00 0.00 4.20
3021 4557 2.099831 GTAGGTGCCTCGTCGTCG 59.900 66.667 0.00 0.00 38.55 5.12
3022 4558 2.046988 TAGGTGCCTCGTCGTCGA 60.047 61.111 4.42 4.42 44.12 4.20
3023 4559 2.393768 TAGGTGCCTCGTCGTCGAC 61.394 63.158 15.51 15.51 41.35 4.20
3032 4568 4.068302 GTCGTCGACGGGAATGTC 57.932 61.111 35.05 14.32 40.29 3.06
3033 4569 1.505353 GTCGTCGACGGGAATGTCT 59.495 57.895 35.05 0.00 40.29 3.41
3034 4570 0.522915 GTCGTCGACGGGAATGTCTC 60.523 60.000 35.05 12.17 40.29 3.36
3035 4571 1.226603 CGTCGACGGGAATGTCTCC 60.227 63.158 29.70 0.00 44.54 3.71
3036 4572 1.654954 CGTCGACGGGAATGTCTCCT 61.655 60.000 29.70 0.00 44.68 3.69
3037 4573 0.100861 GTCGACGGGAATGTCTCCTC 59.899 60.000 0.00 0.00 44.68 3.71
3038 4574 1.035932 TCGACGGGAATGTCTCCTCC 61.036 60.000 0.00 0.00 44.68 4.30
3039 4575 1.823976 GACGGGAATGTCTCCTCCC 59.176 63.158 0.00 0.00 46.97 4.30
3044 4580 1.573108 GGAATGTCTCCTCCCACTGA 58.427 55.000 0.00 0.00 41.61 3.41
3045 4581 1.909302 GGAATGTCTCCTCCCACTGAA 59.091 52.381 0.00 0.00 41.61 3.02
3046 4582 2.305927 GGAATGTCTCCTCCCACTGAAA 59.694 50.000 0.00 0.00 41.61 2.69
3047 4583 3.604582 GAATGTCTCCTCCCACTGAAAG 58.395 50.000 0.00 0.00 42.29 2.62
3048 4584 0.687354 TGTCTCCTCCCACTGAAAGC 59.313 55.000 0.00 0.00 37.60 3.51
3049 4585 0.687354 GTCTCCTCCCACTGAAAGCA 59.313 55.000 0.00 0.00 37.60 3.91
3050 4586 0.687354 TCTCCTCCCACTGAAAGCAC 59.313 55.000 0.00 0.00 37.60 4.40
3051 4587 0.397941 CTCCTCCCACTGAAAGCACA 59.602 55.000 0.00 0.00 37.60 4.57
3052 4588 1.004044 CTCCTCCCACTGAAAGCACAT 59.996 52.381 0.00 0.00 37.60 3.21
3053 4589 1.003580 TCCTCCCACTGAAAGCACATC 59.996 52.381 0.00 0.00 37.60 3.06
3054 4590 1.081892 CTCCCACTGAAAGCACATCG 58.918 55.000 0.00 0.00 37.60 3.84
3055 4591 0.955428 TCCCACTGAAAGCACATCGC 60.955 55.000 0.00 0.00 37.60 4.58
3056 4592 1.503542 CCACTGAAAGCACATCGCC 59.496 57.895 0.00 0.00 44.04 5.54
3057 4593 1.133253 CACTGAAAGCACATCGCCG 59.867 57.895 0.00 0.00 44.04 6.46
3058 4594 2.034879 ACTGAAAGCACATCGCCGG 61.035 57.895 0.00 0.00 44.04 6.13
3059 4595 1.741401 CTGAAAGCACATCGCCGGA 60.741 57.895 5.05 0.00 44.04 5.14
3060 4596 1.298157 CTGAAAGCACATCGCCGGAA 61.298 55.000 5.05 0.00 44.04 4.30
3061 4597 0.676466 TGAAAGCACATCGCCGGAAT 60.676 50.000 5.05 0.00 44.04 3.01
3062 4598 0.028110 GAAAGCACATCGCCGGAATC 59.972 55.000 5.05 0.00 44.04 2.52
3063 4599 1.376609 AAAGCACATCGCCGGAATCC 61.377 55.000 5.05 0.00 44.04 3.01
3064 4600 2.203070 GCACATCGCCGGAATCCT 60.203 61.111 5.05 0.00 32.94 3.24
3065 4601 2.537560 GCACATCGCCGGAATCCTG 61.538 63.158 5.05 0.00 32.94 3.86
3066 4602 1.143838 CACATCGCCGGAATCCTGA 59.856 57.895 5.05 0.00 0.00 3.86
3067 4603 0.461870 CACATCGCCGGAATCCTGAA 60.462 55.000 5.05 0.00 0.00 3.02
3068 4604 0.251916 ACATCGCCGGAATCCTGAAA 59.748 50.000 5.05 0.00 0.00 2.69
3069 4605 1.134098 ACATCGCCGGAATCCTGAAAT 60.134 47.619 5.05 0.00 0.00 2.17
3070 4606 2.104111 ACATCGCCGGAATCCTGAAATA 59.896 45.455 5.05 0.00 0.00 1.40
3071 4607 2.992124 TCGCCGGAATCCTGAAATAA 57.008 45.000 5.05 0.00 0.00 1.40
3072 4608 3.269538 TCGCCGGAATCCTGAAATAAA 57.730 42.857 5.05 0.00 0.00 1.40
3073 4609 3.815809 TCGCCGGAATCCTGAAATAAAT 58.184 40.909 5.05 0.00 0.00 1.40
3074 4610 4.204012 TCGCCGGAATCCTGAAATAAATT 58.796 39.130 5.05 0.00 0.00 1.82
3075 4611 4.274950 TCGCCGGAATCCTGAAATAAATTC 59.725 41.667 5.05 0.00 38.60 2.17
3076 4612 4.036262 CGCCGGAATCCTGAAATAAATTCA 59.964 41.667 5.05 0.00 45.71 2.57
3090 4626 9.236691 TGAAATAAATTCAGAAATAATGCGAGC 57.763 29.630 0.00 0.00 43.08 5.03
3091 4627 9.236691 GAAATAAATTCAGAAATAATGCGAGCA 57.763 29.630 0.00 0.00 37.99 4.26
3092 4628 8.566008 AATAAATTCAGAAATAATGCGAGCAC 57.434 30.769 0.00 0.00 0.00 4.40
3093 4629 4.558538 ATTCAGAAATAATGCGAGCACC 57.441 40.909 0.00 0.00 0.00 5.01
3094 4630 2.984562 TCAGAAATAATGCGAGCACCA 58.015 42.857 0.00 0.00 0.00 4.17
3095 4631 3.342719 TCAGAAATAATGCGAGCACCAA 58.657 40.909 0.00 0.00 0.00 3.67
3096 4632 3.374988 TCAGAAATAATGCGAGCACCAAG 59.625 43.478 0.00 0.00 0.00 3.61
3097 4633 3.374988 CAGAAATAATGCGAGCACCAAGA 59.625 43.478 0.00 0.00 0.00 3.02
3098 4634 4.036027 CAGAAATAATGCGAGCACCAAGAT 59.964 41.667 0.00 0.00 0.00 2.40
3099 4635 4.641989 AGAAATAATGCGAGCACCAAGATT 59.358 37.500 0.00 0.00 0.00 2.40
3100 4636 4.989279 AATAATGCGAGCACCAAGATTT 57.011 36.364 0.00 0.00 0.00 2.17
3101 4637 6.318648 AGAAATAATGCGAGCACCAAGATTTA 59.681 34.615 0.00 0.00 0.00 1.40
3102 4638 6.449635 AATAATGCGAGCACCAAGATTTAA 57.550 33.333 0.00 0.00 0.00 1.52
3103 4639 4.782019 AATGCGAGCACCAAGATTTAAA 57.218 36.364 0.00 0.00 0.00 1.52
3104 4640 3.552604 TGCGAGCACCAAGATTTAAAC 57.447 42.857 0.00 0.00 0.00 2.01
3105 4641 2.227865 TGCGAGCACCAAGATTTAAACC 59.772 45.455 0.00 0.00 0.00 3.27
3106 4642 2.488153 GCGAGCACCAAGATTTAAACCT 59.512 45.455 0.00 0.00 0.00 3.50
3107 4643 3.057526 GCGAGCACCAAGATTTAAACCTT 60.058 43.478 0.00 0.00 0.00 3.50
3108 4644 4.475944 CGAGCACCAAGATTTAAACCTTG 58.524 43.478 14.52 14.52 39.43 3.61
3118 4654 4.718143 AAACCTTGGTGGGTTGGG 57.282 55.556 0.00 0.00 45.67 4.12
3119 4655 1.074850 AAACCTTGGTGGGTTGGGG 60.075 57.895 0.00 0.00 45.67 4.96
3120 4656 1.595058 AAACCTTGGTGGGTTGGGGA 61.595 55.000 0.00 0.00 45.67 4.81
3121 4657 1.376249 AACCTTGGTGGGTTGGGGAT 61.376 55.000 0.00 0.00 46.51 3.85
3122 4658 0.478789 ACCTTGGTGGGTTGGGGATA 60.479 55.000 0.00 0.00 41.11 2.59
3123 4659 0.033503 CCTTGGTGGGTTGGGGATAC 60.034 60.000 0.00 0.00 0.00 2.24
3138 4674 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
3139 4675 2.169978 GGATACCACTGTCCACCTAACC 59.830 54.545 0.00 0.00 34.57 2.85
3140 4676 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
3141 4677 1.513858 ACCACTGTCCACCTAACCAA 58.486 50.000 0.00 0.00 0.00 3.67
3142 4678 1.142262 ACCACTGTCCACCTAACCAAC 59.858 52.381 0.00 0.00 0.00 3.77
3143 4679 1.420138 CCACTGTCCACCTAACCAACT 59.580 52.381 0.00 0.00 0.00 3.16
3144 4680 2.550208 CCACTGTCCACCTAACCAACTC 60.550 54.545 0.00 0.00 0.00 3.01
3145 4681 2.104111 CACTGTCCACCTAACCAACTCA 59.896 50.000 0.00 0.00 0.00 3.41
3146 4682 2.775384 ACTGTCCACCTAACCAACTCAA 59.225 45.455 0.00 0.00 0.00 3.02
3147 4683 3.139077 CTGTCCACCTAACCAACTCAAC 58.861 50.000 0.00 0.00 0.00 3.18
3148 4684 2.158726 TGTCCACCTAACCAACTCAACC 60.159 50.000 0.00 0.00 0.00 3.77
3149 4685 2.128535 TCCACCTAACCAACTCAACCA 58.871 47.619 0.00 0.00 0.00 3.67
3150 4686 2.158726 TCCACCTAACCAACTCAACCAC 60.159 50.000 0.00 0.00 0.00 4.16
3151 4687 2.422235 CCACCTAACCAACTCAACCACA 60.422 50.000 0.00 0.00 0.00 4.17
3152 4688 2.878406 CACCTAACCAACTCAACCACAG 59.122 50.000 0.00 0.00 0.00 3.66
3153 4689 2.158667 ACCTAACCAACTCAACCACAGG 60.159 50.000 0.00 0.00 0.00 4.00
3154 4690 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
3163 4699 3.412722 AACCACAGGTTGATTCGCA 57.587 47.368 0.00 0.00 45.07 5.10
3164 4700 1.909700 AACCACAGGTTGATTCGCAT 58.090 45.000 0.00 0.00 45.07 4.73
3165 4701 1.167851 ACCACAGGTTGATTCGCATG 58.832 50.000 0.00 0.00 27.29 4.06
3166 4702 1.167851 CCACAGGTTGATTCGCATGT 58.832 50.000 0.00 0.00 0.00 3.21
3167 4703 1.541147 CCACAGGTTGATTCGCATGTT 59.459 47.619 0.00 0.00 0.00 2.71
3168 4704 2.414559 CCACAGGTTGATTCGCATGTTC 60.415 50.000 0.00 0.00 0.00 3.18
3169 4705 1.812571 ACAGGTTGATTCGCATGTTCC 59.187 47.619 0.00 0.00 0.00 3.62
3170 4706 1.811965 CAGGTTGATTCGCATGTTCCA 59.188 47.619 0.00 0.00 0.00 3.53
3171 4707 2.424601 CAGGTTGATTCGCATGTTCCAT 59.575 45.455 0.00 0.00 0.00 3.41
3172 4708 3.091545 AGGTTGATTCGCATGTTCCATT 58.908 40.909 0.00 0.00 0.00 3.16
3173 4709 3.511146 AGGTTGATTCGCATGTTCCATTT 59.489 39.130 0.00 0.00 0.00 2.32
3174 4710 4.021192 AGGTTGATTCGCATGTTCCATTTT 60.021 37.500 0.00 0.00 0.00 1.82
3175 4711 4.690280 GGTTGATTCGCATGTTCCATTTTT 59.310 37.500 0.00 0.00 0.00 1.94
3176 4712 5.163963 GGTTGATTCGCATGTTCCATTTTTC 60.164 40.000 0.00 0.00 0.00 2.29
3177 4713 5.131594 TGATTCGCATGTTCCATTTTTCA 57.868 34.783 0.00 0.00 0.00 2.69
3178 4714 5.722263 TGATTCGCATGTTCCATTTTTCAT 58.278 33.333 0.00 0.00 0.00 2.57
3179 4715 6.164876 TGATTCGCATGTTCCATTTTTCATT 58.835 32.000 0.00 0.00 0.00 2.57
3220 4756 9.935241 TCTATACAAAATCATCCATTAGAGCTC 57.065 33.333 5.27 5.27 0.00 4.09
3222 4758 5.136105 ACAAAATCATCCATTAGAGCTCCC 58.864 41.667 10.93 0.00 0.00 4.30
3223 4759 4.379302 AAATCATCCATTAGAGCTCCCC 57.621 45.455 10.93 0.00 0.00 4.81
3224 4760 2.803285 TCATCCATTAGAGCTCCCCT 57.197 50.000 10.93 0.00 0.00 4.79
3226 4762 3.511477 TCATCCATTAGAGCTCCCCTAC 58.489 50.000 10.93 0.00 0.00 3.18
3227 4763 3.116746 TCATCCATTAGAGCTCCCCTACA 60.117 47.826 10.93 0.00 0.00 2.74
3228 4764 3.414759 TCCATTAGAGCTCCCCTACAA 57.585 47.619 10.93 0.00 0.00 2.41
3229 4765 3.941629 TCCATTAGAGCTCCCCTACAAT 58.058 45.455 10.93 0.00 0.00 2.71
3231 4767 3.244700 CCATTAGAGCTCCCCTACAATGG 60.245 52.174 10.93 14.77 38.03 3.16
3232 4768 2.103153 TAGAGCTCCCCTACAATGGG 57.897 55.000 10.93 0.00 46.68 4.00
3234 4770 2.195956 GCTCCCCTACAATGGGCC 59.804 66.667 0.00 0.00 45.78 5.80
3236 4772 3.093835 TCCCCTACAATGGGCCGG 61.094 66.667 0.00 0.00 45.78 6.13
3237 4773 3.093835 CCCCTACAATGGGCCGGA 61.094 66.667 5.05 0.00 45.78 5.14
3238 4774 2.685534 CCCCTACAATGGGCCGGAA 61.686 63.158 5.05 0.00 45.78 4.30
3239 4775 1.536676 CCCTACAATGGGCCGGAAT 59.463 57.895 5.05 0.00 40.84 3.01
3241 4777 1.271379 CCCTACAATGGGCCGGAATAG 60.271 57.143 5.05 0.00 40.84 1.73
3590 7175 2.245438 TATGGCCGCGTCCACAATCA 62.245 55.000 12.81 0.00 39.25 2.57
3598 7183 2.738643 CGCGTCCACAATCAGGTATCTT 60.739 50.000 0.00 0.00 0.00 2.40
3605 7190 8.141909 CGTCCACAATCAGGTATCTTAAATCTA 58.858 37.037 0.00 0.00 0.00 1.98
3699 7286 7.338800 AGCATAGTTCAACCTAAATTCCATG 57.661 36.000 0.00 0.00 0.00 3.66
3738 7325 6.373216 ACGGTTCATCGGATCAAAAGATTTAA 59.627 34.615 0.00 0.00 0.00 1.52
3747 7334 8.673711 TCGGATCAAAAGATTTAATTCATCGTT 58.326 29.630 0.00 0.00 0.00 3.85
3765 7352 5.871465 TCGTTGCAGCATAGATAAAAACA 57.129 34.783 0.00 0.00 0.00 2.83
3796 7384 6.909909 ACTAAAAACTAAAATGGAAGCGAGG 58.090 36.000 0.00 0.00 0.00 4.63
3800 7388 0.746563 TAAAATGGAAGCGAGGGCGG 60.747 55.000 0.00 0.00 46.35 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 4.645921 GTTGGGTTGCAGCACCGC 62.646 66.667 0.00 0.00 37.76 5.68
15 16 4.326766 CGTTGGGTTGCAGCACCG 62.327 66.667 0.00 0.00 37.76 4.94
16 17 3.977244 CCGTTGGGTTGCAGCACC 61.977 66.667 0.00 0.00 35.88 5.01
17 18 2.904866 TCCGTTGGGTTGCAGCAC 60.905 61.111 2.05 0.00 33.83 4.40
18 19 2.594303 CTCCGTTGGGTTGCAGCA 60.594 61.111 2.05 0.00 33.83 4.41
19 20 3.365265 CCTCCGTTGGGTTGCAGC 61.365 66.667 0.00 0.00 33.83 5.25
20 21 3.365265 GCCTCCGTTGGGTTGCAG 61.365 66.667 0.00 0.00 33.18 4.41
23 24 3.047877 GTCGCCTCCGTTGGGTTG 61.048 66.667 0.00 0.00 35.54 3.77
24 25 3.552384 TGTCGCCTCCGTTGGGTT 61.552 61.111 0.00 0.00 35.54 4.11
25 26 4.309950 GTGTCGCCTCCGTTGGGT 62.310 66.667 0.00 0.00 35.54 4.51
26 27 3.818121 TTGTGTCGCCTCCGTTGGG 62.818 63.158 0.00 0.00 35.54 4.12
27 28 2.280524 TTGTGTCGCCTCCGTTGG 60.281 61.111 0.00 0.00 35.54 3.77
28 29 1.885388 TGTTGTGTCGCCTCCGTTG 60.885 57.895 0.00 0.00 35.54 4.10
29 30 1.885850 GTGTTGTGTCGCCTCCGTT 60.886 57.895 0.00 0.00 35.54 4.44
30 31 2.279918 GTGTTGTGTCGCCTCCGT 60.280 61.111 0.00 0.00 35.54 4.69
31 32 3.403057 CGTGTTGTGTCGCCTCCG 61.403 66.667 0.00 0.00 0.00 4.63
32 33 3.712881 GCGTGTTGTGTCGCCTCC 61.713 66.667 0.00 0.00 45.54 4.30
37 38 3.403057 CTCCCGCGTGTTGTGTCG 61.403 66.667 4.92 0.00 0.00 4.35
38 39 3.041940 CCTCCCGCGTGTTGTGTC 61.042 66.667 4.92 0.00 0.00 3.67
39 40 3.515316 CTCCTCCCGCGTGTTGTGT 62.515 63.158 4.92 0.00 0.00 3.72
40 41 2.738521 CTCCTCCCGCGTGTTGTG 60.739 66.667 4.92 0.00 0.00 3.33
41 42 4.003788 CCTCCTCCCGCGTGTTGT 62.004 66.667 4.92 0.00 0.00 3.32
55 56 4.521062 ATGACGAGCAGGCGCCTC 62.521 66.667 30.29 21.36 39.83 4.70
56 57 4.087892 AATGACGAGCAGGCGCCT 62.088 61.111 27.08 27.08 39.83 5.52
57 58 3.869272 CAATGACGAGCAGGCGCC 61.869 66.667 21.89 21.89 39.83 6.53
58 59 4.527157 GCAATGACGAGCAGGCGC 62.527 66.667 0.00 0.00 38.99 6.53
59 60 2.816958 AGCAATGACGAGCAGGCG 60.817 61.111 0.00 0.00 36.27 5.52
60 61 2.789917 CAGCAATGACGAGCAGGC 59.210 61.111 0.00 0.00 0.00 4.85
61 62 2.758089 GGCAGCAATGACGAGCAGG 61.758 63.158 0.00 0.00 0.00 4.85
62 63 2.789917 GGCAGCAATGACGAGCAG 59.210 61.111 0.00 0.00 0.00 4.24
63 64 3.120385 CGGCAGCAATGACGAGCA 61.120 61.111 0.00 0.00 44.30 4.26
64 65 3.869272 CCGGCAGCAATGACGAGC 61.869 66.667 4.80 0.00 44.30 5.03
65 66 3.869272 GCCGGCAGCAATGACGAG 61.869 66.667 24.80 0.00 44.30 4.18
68 69 3.204827 ATCGCCGGCAGCAATGAC 61.205 61.111 28.98 0.00 44.04 3.06
69 70 3.204119 CATCGCCGGCAGCAATGA 61.204 61.111 28.98 14.98 44.04 2.57
70 71 4.918129 GCATCGCCGGCAGCAATG 62.918 66.667 28.98 22.69 44.04 2.82
88 89 4.166011 GTGGTCAAGCGCGGCATC 62.166 66.667 8.83 0.00 0.00 3.91
94 95 3.712881 GTGGTCGTGGTCAAGCGC 61.713 66.667 0.00 0.00 0.00 5.92
95 96 3.041940 GGTGGTCGTGGTCAAGCG 61.042 66.667 0.00 0.00 0.00 4.68
96 97 3.041940 CGGTGGTCGTGGTCAAGC 61.042 66.667 0.00 0.00 0.00 4.01
97 98 2.357034 CCGGTGGTCGTGGTCAAG 60.357 66.667 0.00 0.00 37.11 3.02
98 99 3.155861 ACCGGTGGTCGTGGTCAA 61.156 61.111 6.12 0.00 37.11 3.18
99 100 3.918977 CACCGGTGGTCGTGGTCA 61.919 66.667 27.57 0.00 37.11 4.02
100 101 3.450043 AACACCGGTGGTCGTGGTC 62.450 63.158 36.47 0.00 37.11 4.02
101 102 3.472726 AACACCGGTGGTCGTGGT 61.473 61.111 36.47 12.80 37.11 4.16
102 103 2.970324 CAACACCGGTGGTCGTGG 60.970 66.667 36.47 16.42 37.11 4.94
103 104 2.202960 ACAACACCGGTGGTCGTG 60.203 61.111 36.47 27.76 37.11 4.35
104 105 2.202960 CACAACACCGGTGGTCGT 60.203 61.111 36.47 26.63 37.11 4.34
105 106 2.107343 TCACAACACCGGTGGTCG 59.893 61.111 36.47 26.00 36.90 4.79
106 107 2.241880 CGTCACAACACCGGTGGTC 61.242 63.158 36.47 18.66 36.90 4.02
107 108 2.202960 CGTCACAACACCGGTGGT 60.203 61.111 36.47 30.56 36.90 4.16
108 109 3.645975 GCGTCACAACACCGGTGG 61.646 66.667 36.47 22.83 36.90 4.61
109 110 3.995669 CGCGTCACAACACCGGTG 61.996 66.667 32.83 32.83 37.60 4.94
143 144 3.688475 ATTTGCATCGCAGCACGGC 62.688 57.895 0.94 0.00 45.61 5.68
144 145 1.584483 GATTTGCATCGCAGCACGG 60.584 57.895 0.94 0.00 45.61 4.94
145 146 1.931137 CGATTTGCATCGCAGCACG 60.931 57.895 0.00 0.00 45.66 5.34
146 147 3.972537 CGATTTGCATCGCAGCAC 58.027 55.556 0.00 0.00 45.66 4.40
169 170 1.012486 GGGTGTCGATGACGGTTGTC 61.012 60.000 0.00 0.00 45.71 3.18
170 171 1.005394 GGGTGTCGATGACGGTTGT 60.005 57.895 0.00 0.00 40.21 3.32
171 172 2.092291 CGGGTGTCGATGACGGTTG 61.092 63.158 0.00 0.00 42.43 3.77
172 173 2.260434 CGGGTGTCGATGACGGTT 59.740 61.111 0.00 0.00 42.43 4.44
173 174 4.430765 GCGGGTGTCGATGACGGT 62.431 66.667 0.00 0.00 42.43 4.83
174 175 4.129737 AGCGGGTGTCGATGACGG 62.130 66.667 0.00 0.00 42.43 4.79
179 180 1.068083 CTATGCAGCGGGTGTCGAT 59.932 57.895 9.16 1.98 42.43 3.59
180 181 2.494445 CTATGCAGCGGGTGTCGA 59.506 61.111 9.16 0.00 42.43 4.20
181 182 3.264897 GCTATGCAGCGGGTGTCG 61.265 66.667 9.16 0.00 38.22 4.35
191 192 4.897357 CGCCGGAGCTGCTATGCA 62.897 66.667 5.05 0.00 36.60 3.96
192 193 4.592192 TCGCCGGAGCTGCTATGC 62.592 66.667 5.05 4.75 36.60 3.14
193 194 1.953138 CTTCGCCGGAGCTGCTATG 60.953 63.158 5.05 0.00 36.60 2.23
194 195 2.356818 GACTTCGCCGGAGCTGCTAT 62.357 60.000 5.05 0.00 36.60 2.97
195 196 3.064987 GACTTCGCCGGAGCTGCTA 62.065 63.158 5.05 0.00 36.60 3.49
196 197 4.443266 GACTTCGCCGGAGCTGCT 62.443 66.667 5.05 0.00 36.60 4.24
198 199 4.116328 TCGACTTCGCCGGAGCTG 62.116 66.667 5.05 0.00 39.60 4.24
199 200 4.117661 GTCGACTTCGCCGGAGCT 62.118 66.667 5.05 0.00 39.60 4.09
207 208 3.175240 CAGCAGCCGTCGACTTCG 61.175 66.667 14.70 0.00 41.45 3.79
208 209 1.347817 CTTCAGCAGCCGTCGACTTC 61.348 60.000 14.70 4.89 0.00 3.01
209 210 1.373497 CTTCAGCAGCCGTCGACTT 60.373 57.895 14.70 0.00 0.00 3.01
210 211 2.259818 CTTCAGCAGCCGTCGACT 59.740 61.111 14.70 0.00 0.00 4.18
211 212 2.049063 ACTTCAGCAGCCGTCGAC 60.049 61.111 5.18 5.18 0.00 4.20
212 213 2.049156 CACTTCAGCAGCCGTCGA 60.049 61.111 0.00 0.00 0.00 4.20
213 214 3.782244 GCACTTCAGCAGCCGTCG 61.782 66.667 0.00 0.00 0.00 5.12
214 215 2.666190 TGCACTTCAGCAGCCGTC 60.666 61.111 0.00 0.00 40.11 4.79
215 216 2.974698 GTGCACTTCAGCAGCCGT 60.975 61.111 10.32 0.00 46.69 5.68
219 220 2.031516 CGGAGGTGCACTTCAGCAG 61.032 63.158 27.73 13.39 46.69 4.24
220 221 2.031012 CGGAGGTGCACTTCAGCA 59.969 61.111 27.73 0.00 45.25 4.41
233 234 0.378257 CAACATTGATTCCGCCGGAG 59.622 55.000 5.05 0.00 31.21 4.63
234 235 1.029408 CCAACATTGATTCCGCCGGA 61.029 55.000 5.05 0.00 0.00 5.14
235 236 1.433064 CCAACATTGATTCCGCCGG 59.567 57.895 0.00 0.00 0.00 6.13
236 237 1.433064 CCCAACATTGATTCCGCCG 59.567 57.895 0.00 0.00 0.00 6.46
237 238 1.141665 GCCCAACATTGATTCCGCC 59.858 57.895 0.00 0.00 0.00 6.13
238 239 1.226660 CGCCCAACATTGATTCCGC 60.227 57.895 0.00 0.00 0.00 5.54
239 240 1.226660 GCGCCCAACATTGATTCCG 60.227 57.895 0.00 0.00 0.00 4.30
240 241 0.246086 TTGCGCCCAACATTGATTCC 59.754 50.000 4.18 0.00 0.00 3.01
241 242 2.298411 ATTGCGCCCAACATTGATTC 57.702 45.000 4.18 0.00 32.95 2.52
242 243 2.620242 GAATTGCGCCCAACATTGATT 58.380 42.857 4.18 0.00 32.95 2.57
243 244 1.134729 GGAATTGCGCCCAACATTGAT 60.135 47.619 4.18 0.00 32.95 2.57
247 248 1.682854 CATAGGAATTGCGCCCAACAT 59.317 47.619 4.18 0.00 32.95 2.71
250 251 0.395586 AGCATAGGAATTGCGCCCAA 60.396 50.000 4.18 0.00 44.82 4.12
267 268 2.184579 GGAGGTGTAGCCACGAGC 59.815 66.667 0.00 0.00 42.80 5.03
300 301 1.077644 AGCTGGGCTGATGCAAGAG 60.078 57.895 0.00 0.00 37.57 2.85
365 367 1.504647 CGAGATGCATCGCCATTGCT 61.505 55.000 22.57 2.70 40.77 3.91
368 370 1.341209 TCTACGAGATGCATCGCCATT 59.659 47.619 22.57 11.06 46.60 3.16
372 374 0.041224 TCGTCTACGAGATGCATCGC 60.041 55.000 20.67 19.99 46.60 4.58
386 388 3.507009 GAGTAGCGCCCGTCGTCT 61.507 66.667 2.29 0.00 41.07 4.18
429 431 4.036804 GCATCGTTGTTGCCGGCA 62.037 61.111 29.03 29.03 33.95 5.69
431 433 2.480555 GAGCATCGTTGTTGCCGG 59.519 61.111 0.00 0.00 41.06 6.13
433 435 1.796796 GAGGAGCATCGTTGTTGCC 59.203 57.895 0.00 0.00 41.06 4.52
434 436 1.014044 TCGAGGAGCATCGTTGTTGC 61.014 55.000 4.44 0.00 43.20 4.17
437 439 1.154016 CGTCGAGGAGCATCGTTGT 60.154 57.895 0.00 0.00 43.20 3.32
438 440 2.508891 GCGTCGAGGAGCATCGTTG 61.509 63.158 9.75 0.30 43.20 4.10
439 441 2.202623 GCGTCGAGGAGCATCGTT 60.203 61.111 9.75 0.00 43.20 3.85
440 442 4.194720 GGCGTCGAGGAGCATCGT 62.195 66.667 9.75 0.00 43.20 3.73
514 516 1.790043 CGCATCAGTGTAACACAACGA 59.210 47.619 0.00 0.00 41.43 3.85
526 528 0.947660 CAGTGCACAGACGCATCAGT 60.948 55.000 21.04 0.00 45.26 3.41
528 530 1.668793 CCAGTGCACAGACGCATCA 60.669 57.895 21.04 0.00 45.26 3.07
538 540 2.113986 AGCTGAACCCCAGTGCAC 59.886 61.111 9.40 9.40 44.71 4.57
539 541 2.113774 CAGCTGAACCCCAGTGCA 59.886 61.111 8.42 0.00 44.71 4.57
542 544 2.883828 CGTCCAGCTGAACCCCAGT 61.884 63.158 17.39 0.00 44.71 4.00
562 564 5.660417 TCATCTTCCTAACAGAAGCTCATCT 59.340 40.000 0.00 0.00 42.52 2.90
563 565 5.911752 TCATCTTCCTAACAGAAGCTCATC 58.088 41.667 0.00 0.00 42.52 2.92
564 566 5.946942 TCATCTTCCTAACAGAAGCTCAT 57.053 39.130 0.00 0.00 42.52 2.90
565 567 5.946942 ATCATCTTCCTAACAGAAGCTCA 57.053 39.130 0.00 0.00 42.52 4.26
566 568 6.344500 TGAATCATCTTCCTAACAGAAGCTC 58.656 40.000 0.00 0.00 42.52 4.09
567 569 6.155910 TCTGAATCATCTTCCTAACAGAAGCT 59.844 38.462 0.00 0.00 42.52 3.74
568 570 6.344500 TCTGAATCATCTTCCTAACAGAAGC 58.656 40.000 0.00 0.00 42.52 3.86
569 571 8.961294 AATCTGAATCATCTTCCTAACAGAAG 57.039 34.615 0.00 0.00 43.88 2.85
574 576 8.987890 GCTTCTAATCTGAATCATCTTCCTAAC 58.012 37.037 0.00 0.00 0.00 2.34
626 1152 0.891904 TAAAGCAGCCCACCCGTTTC 60.892 55.000 0.00 0.00 0.00 2.78
630 1156 0.394352 ATCTTAAAGCAGCCCACCCG 60.394 55.000 0.00 0.00 0.00 5.28
668 1194 1.521681 GGAGACCCGATTCCTTGCG 60.522 63.158 0.00 0.00 0.00 4.85
677 1203 2.419667 GAAACGAAATTGGAGACCCGA 58.580 47.619 0.00 0.00 34.29 5.14
678 1204 1.127951 CGAAACGAAATTGGAGACCCG 59.872 52.381 0.00 0.00 34.29 5.28
706 1232 3.528078 AGGGGGAAGAAAATCTAAGACCC 59.472 47.826 0.00 0.00 35.80 4.46
714 1240 2.487445 GGATCGGAGGGGGAAGAAAATC 60.487 54.545 0.00 0.00 0.00 2.17
715 1241 1.495148 GGATCGGAGGGGGAAGAAAAT 59.505 52.381 0.00 0.00 0.00 1.82
716 1242 0.916809 GGATCGGAGGGGGAAGAAAA 59.083 55.000 0.00 0.00 0.00 2.29
717 1243 0.986550 GGGATCGGAGGGGGAAGAAA 60.987 60.000 0.00 0.00 0.00 2.52
718 1244 1.384082 GGGATCGGAGGGGGAAGAA 60.384 63.158 0.00 0.00 0.00 2.52
719 1245 2.285868 GGGATCGGAGGGGGAAGA 59.714 66.667 0.00 0.00 0.00 2.87
720 1246 2.040884 TGGGATCGGAGGGGGAAG 60.041 66.667 0.00 0.00 0.00 3.46
721 1247 2.366435 GTGGGATCGGAGGGGGAA 60.366 66.667 0.00 0.00 0.00 3.97
722 1248 4.853142 CGTGGGATCGGAGGGGGA 62.853 72.222 0.00 0.00 0.00 4.81
1165 2629 1.764054 CGGGCTCTCCTCCAGGAAT 60.764 63.158 0.00 0.00 44.91 3.01
1795 3276 2.227089 GATGGCCTCGACGTGGTCTT 62.227 60.000 20.09 14.43 0.00 3.01
1964 3445 3.584406 ATAATTCAGAGCTCCGATCGG 57.416 47.619 28.62 28.62 0.00 4.18
1970 3451 6.523840 ACATCTCAGAATAATTCAGAGCTCC 58.476 40.000 10.93 0.00 41.48 4.70
1979 3464 7.800092 AGCAGGAAGTACATCTCAGAATAATT 58.200 34.615 0.00 0.00 0.00 1.40
1999 3484 1.728971 GCGATCGATCCATTAAGCAGG 59.271 52.381 21.57 2.78 0.00 4.85
2031 3524 2.820037 GCAGGAAGTACGGCTGCC 60.820 66.667 9.11 9.11 43.78 4.85
2140 3633 1.226974 CCCGATGTGCTCGTACCAG 60.227 63.158 0.00 0.00 46.18 4.00
2219 3712 2.429571 TTACCTCGTGCGCGTGAC 60.430 61.111 22.07 3.92 39.49 3.67
2278 3776 1.800586 CGTGTTCCTGTTCATGTCTGG 59.199 52.381 0.00 1.74 0.00 3.86
2298 3796 0.322816 TGGCAGAGATCCAGGCAAAC 60.323 55.000 3.84 0.00 34.72 2.93
2329 3827 1.336148 CGCACCAACATGAAGCACATT 60.336 47.619 0.00 0.00 37.07 2.71
2334 3832 1.730547 GCACGCACCAACATGAAGC 60.731 57.895 0.00 0.00 0.00 3.86
2526 4027 4.056125 CTGCTGCACTCGACCGGA 62.056 66.667 9.46 0.00 0.00 5.14
2678 4179 0.546122 CCATTAGCCTGCACACCCTA 59.454 55.000 0.00 0.00 0.00 3.53
2700 4201 7.347252 AGTTCTGTACACTATGACTATCCAGA 58.653 38.462 0.00 0.00 0.00 3.86
2740 4276 8.973182 AGTTTCCTCCTGTAATTGTGTTAAAAA 58.027 29.630 0.00 0.00 0.00 1.94
2741 4277 8.410141 CAGTTTCCTCCTGTAATTGTGTTAAAA 58.590 33.333 0.00 0.00 0.00 1.52
2742 4278 7.558444 ACAGTTTCCTCCTGTAATTGTGTTAAA 59.442 33.333 0.00 0.00 41.24 1.52
2743 4279 7.057894 ACAGTTTCCTCCTGTAATTGTGTTAA 58.942 34.615 0.00 0.00 41.24 2.01
2744 4280 6.597562 ACAGTTTCCTCCTGTAATTGTGTTA 58.402 36.000 0.00 0.00 41.24 2.41
2745 4281 5.445964 ACAGTTTCCTCCTGTAATTGTGTT 58.554 37.500 0.00 0.00 41.24 3.32
2746 4282 5.048846 ACAGTTTCCTCCTGTAATTGTGT 57.951 39.130 0.00 0.00 41.24 3.72
2747 4283 5.643777 CCTACAGTTTCCTCCTGTAATTGTG 59.356 44.000 0.00 0.00 42.97 3.33
2748 4284 5.546499 TCCTACAGTTTCCTCCTGTAATTGT 59.454 40.000 0.00 0.00 42.97 2.71
2749 4285 6.049955 TCCTACAGTTTCCTCCTGTAATTG 57.950 41.667 0.00 0.00 42.97 2.32
2750 4286 6.697641 TTCCTACAGTTTCCTCCTGTAATT 57.302 37.500 0.00 0.00 42.97 1.40
2751 4287 6.043938 TGTTTCCTACAGTTTCCTCCTGTAAT 59.956 38.462 0.00 0.00 42.97 1.89
2752 4288 5.367352 TGTTTCCTACAGTTTCCTCCTGTAA 59.633 40.000 0.00 0.00 42.97 2.41
2753 4289 4.903049 TGTTTCCTACAGTTTCCTCCTGTA 59.097 41.667 0.00 0.00 42.83 2.74
2754 4290 3.714798 TGTTTCCTACAGTTTCCTCCTGT 59.285 43.478 0.00 0.00 44.90 4.00
2755 4291 4.351874 TGTTTCCTACAGTTTCCTCCTG 57.648 45.455 0.00 0.00 36.01 3.86
2756 4292 4.351111 ACATGTTTCCTACAGTTTCCTCCT 59.649 41.667 0.00 0.00 40.83 3.69
2760 4296 5.767816 ACAACATGTTTCCTACAGTTTCC 57.232 39.130 8.77 0.00 40.83 3.13
2789 4325 0.674895 AGAATCCCGCTGCTGTCAAC 60.675 55.000 0.00 0.00 0.00 3.18
2792 4328 1.986575 GCAAGAATCCCGCTGCTGTC 61.987 60.000 0.00 0.00 0.00 3.51
2863 4399 7.377397 CGCTTGTGTTTGTACTTATGCTAAAAA 59.623 33.333 0.00 0.00 0.00 1.94
2864 4400 6.853872 CGCTTGTGTTTGTACTTATGCTAAAA 59.146 34.615 0.00 0.00 0.00 1.52
2865 4401 6.367421 CGCTTGTGTTTGTACTTATGCTAAA 58.633 36.000 0.00 0.00 0.00 1.85
2866 4402 5.615984 GCGCTTGTGTTTGTACTTATGCTAA 60.616 40.000 0.00 0.00 0.00 3.09
2867 4403 4.142988 GCGCTTGTGTTTGTACTTATGCTA 60.143 41.667 0.00 0.00 0.00 3.49
2868 4404 3.364964 GCGCTTGTGTTTGTACTTATGCT 60.365 43.478 0.00 0.00 0.00 3.79
2869 4405 2.908626 GCGCTTGTGTTTGTACTTATGC 59.091 45.455 0.00 0.00 0.00 3.14
2870 4406 4.084066 TGAGCGCTTGTGTTTGTACTTATG 60.084 41.667 13.26 0.00 0.00 1.90
2871 4407 4.062293 TGAGCGCTTGTGTTTGTACTTAT 58.938 39.130 13.26 0.00 0.00 1.73
2872 4408 3.459145 TGAGCGCTTGTGTTTGTACTTA 58.541 40.909 13.26 0.00 0.00 2.24
2873 4409 2.285083 TGAGCGCTTGTGTTTGTACTT 58.715 42.857 13.26 0.00 0.00 2.24
2874 4410 1.948104 TGAGCGCTTGTGTTTGTACT 58.052 45.000 13.26 0.00 0.00 2.73
2875 4411 2.969443 ATGAGCGCTTGTGTTTGTAC 57.031 45.000 13.26 0.00 0.00 2.90
2876 4412 5.062934 GTGTATATGAGCGCTTGTGTTTGTA 59.937 40.000 13.26 0.00 0.00 2.41
2877 4413 4.000325 TGTATATGAGCGCTTGTGTTTGT 59.000 39.130 13.26 0.00 0.00 2.83
2878 4414 4.334443 GTGTATATGAGCGCTTGTGTTTG 58.666 43.478 13.26 0.00 0.00 2.93
2879 4415 3.062099 CGTGTATATGAGCGCTTGTGTTT 59.938 43.478 13.26 0.00 0.00 2.83
2880 4416 2.603110 CGTGTATATGAGCGCTTGTGTT 59.397 45.455 13.26 0.00 0.00 3.32
2881 4417 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
2882 4418 2.034591 CACGTGTATATGAGCGCTTGTG 60.035 50.000 13.26 5.89 0.00 3.33
2883 4419 2.193447 CACGTGTATATGAGCGCTTGT 58.807 47.619 13.26 5.98 0.00 3.16
2884 4420 1.071239 GCACGTGTATATGAGCGCTTG 60.071 52.381 13.26 2.09 0.00 4.01
2885 4421 1.209128 GCACGTGTATATGAGCGCTT 58.791 50.000 13.26 0.00 0.00 4.68
2886 4422 0.102300 TGCACGTGTATATGAGCGCT 59.898 50.000 11.27 11.27 32.85 5.92
2887 4423 1.139989 ATGCACGTGTATATGAGCGC 58.860 50.000 18.03 0.00 32.85 5.92
2888 4424 3.119628 GTGTATGCACGTGTATATGAGCG 59.880 47.826 25.81 0.00 35.75 5.03
2889 4425 4.631133 GTGTATGCACGTGTATATGAGC 57.369 45.455 25.81 15.09 35.75 4.26
2901 4437 4.607293 TCATAGGGATGAGTGTATGCAC 57.393 45.455 5.71 5.71 45.57 4.57
2902 4438 5.554070 CATTCATAGGGATGAGTGTATGCA 58.446 41.667 0.00 0.00 43.03 3.96
2903 4439 4.394300 GCATTCATAGGGATGAGTGTATGC 59.606 45.833 0.00 8.64 46.40 3.14
2904 4440 5.410746 GTGCATTCATAGGGATGAGTGTATG 59.589 44.000 0.00 3.63 46.40 2.39
2905 4441 5.072193 TGTGCATTCATAGGGATGAGTGTAT 59.928 40.000 0.00 0.00 46.40 2.29
2906 4442 4.408596 TGTGCATTCATAGGGATGAGTGTA 59.591 41.667 0.00 5.11 46.40 2.90
2907 4443 3.200605 TGTGCATTCATAGGGATGAGTGT 59.799 43.478 0.00 0.00 46.40 3.55
2909 4445 3.200605 TGTGTGCATTCATAGGGATGAGT 59.799 43.478 0.00 0.00 43.03 3.41
2910 4446 3.562973 GTGTGTGCATTCATAGGGATGAG 59.437 47.826 0.00 0.00 43.03 2.90
2911 4447 3.544684 GTGTGTGCATTCATAGGGATGA 58.455 45.455 0.00 0.00 40.45 2.92
2912 4448 2.288729 CGTGTGTGCATTCATAGGGATG 59.711 50.000 0.00 0.00 0.00 3.51
2913 4449 2.564771 CGTGTGTGCATTCATAGGGAT 58.435 47.619 0.00 0.00 0.00 3.85
2914 4450 2.011548 GCGTGTGTGCATTCATAGGGA 61.012 52.381 0.00 0.00 34.15 4.20
2915 4451 0.378257 GCGTGTGTGCATTCATAGGG 59.622 55.000 0.00 0.00 34.15 3.53
2916 4452 1.085893 TGCGTGTGTGCATTCATAGG 58.914 50.000 0.00 0.00 40.62 2.57
2924 4460 3.095347 TAGGGTGTGCGTGTGTGCA 62.095 57.895 0.00 0.00 43.95 4.57
2925 4461 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
2926 4462 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
2927 4463 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
2928 4464 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
2929 4465 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
2930 4466 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
2931 4467 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
2932 4468 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
2933 4469 1.134189 GTTCATAGGGGTAGGGTGTGC 60.134 57.143 0.00 0.00 0.00 4.57
2934 4470 2.093128 GTGTTCATAGGGGTAGGGTGTG 60.093 54.545 0.00 0.00 0.00 3.82
2935 4471 2.193993 GTGTTCATAGGGGTAGGGTGT 58.806 52.381 0.00 0.00 0.00 4.16
2936 4472 1.489230 GGTGTTCATAGGGGTAGGGTG 59.511 57.143 0.00 0.00 0.00 4.61
2937 4473 1.368558 AGGTGTTCATAGGGGTAGGGT 59.631 52.381 0.00 0.00 0.00 4.34
2938 4474 2.047830 GAGGTGTTCATAGGGGTAGGG 58.952 57.143 0.00 0.00 0.00 3.53
2939 4475 2.047830 GGAGGTGTTCATAGGGGTAGG 58.952 57.143 0.00 0.00 0.00 3.18
2940 4476 1.687123 CGGAGGTGTTCATAGGGGTAG 59.313 57.143 0.00 0.00 0.00 3.18
2941 4477 1.288633 TCGGAGGTGTTCATAGGGGTA 59.711 52.381 0.00 0.00 0.00 3.69
2942 4478 0.042131 TCGGAGGTGTTCATAGGGGT 59.958 55.000 0.00 0.00 0.00 4.95
2943 4479 0.753262 CTCGGAGGTGTTCATAGGGG 59.247 60.000 0.00 0.00 0.00 4.79
2944 4480 1.776662 TCTCGGAGGTGTTCATAGGG 58.223 55.000 4.96 0.00 0.00 3.53
2945 4481 3.195825 AGTTTCTCGGAGGTGTTCATAGG 59.804 47.826 4.96 0.00 0.00 2.57
2946 4482 4.082190 TCAGTTTCTCGGAGGTGTTCATAG 60.082 45.833 4.96 0.00 0.00 2.23
2947 4483 3.830178 TCAGTTTCTCGGAGGTGTTCATA 59.170 43.478 4.96 0.00 0.00 2.15
2948 4484 2.632996 TCAGTTTCTCGGAGGTGTTCAT 59.367 45.455 4.96 0.00 0.00 2.57
2949 4485 2.035961 CTCAGTTTCTCGGAGGTGTTCA 59.964 50.000 4.96 0.00 35.32 3.18
2950 4486 2.678324 CTCAGTTTCTCGGAGGTGTTC 58.322 52.381 4.96 0.00 35.32 3.18
2951 4487 1.270358 GCTCAGTTTCTCGGAGGTGTT 60.270 52.381 4.96 0.00 38.48 3.32
2952 4488 0.318762 GCTCAGTTTCTCGGAGGTGT 59.681 55.000 4.96 0.00 38.48 4.16
2953 4489 0.390472 GGCTCAGTTTCTCGGAGGTG 60.390 60.000 4.96 0.00 38.48 4.00
2954 4490 1.878656 CGGCTCAGTTTCTCGGAGGT 61.879 60.000 4.96 0.00 38.48 3.85
2955 4491 1.153745 CGGCTCAGTTTCTCGGAGG 60.154 63.158 4.96 0.00 38.48 4.30
2956 4492 1.153745 CCGGCTCAGTTTCTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
2957 4493 2.970639 CCGGCTCAGTTTCTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
2958 4494 2.815647 GCCGGCTCAGTTTCTCGG 60.816 66.667 22.15 0.00 43.13 4.63
2959 4495 0.179111 TATGCCGGCTCAGTTTCTCG 60.179 55.000 29.70 0.00 0.00 4.04
2960 4496 2.139118 GATATGCCGGCTCAGTTTCTC 58.861 52.381 29.70 9.05 0.00 2.87
2961 4497 1.486310 TGATATGCCGGCTCAGTTTCT 59.514 47.619 29.70 3.16 0.00 2.52
2962 4498 1.953559 TGATATGCCGGCTCAGTTTC 58.046 50.000 29.70 15.47 0.00 2.78
2963 4499 2.105477 AGATGATATGCCGGCTCAGTTT 59.895 45.455 29.70 8.26 0.00 2.66
2964 4500 1.696336 AGATGATATGCCGGCTCAGTT 59.304 47.619 29.70 9.04 0.00 3.16
2965 4501 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
2966 4502 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
2967 4503 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
2968 4504 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
2969 4505 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
2970 4506 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
2971 4507 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
2972 4508 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
2973 4509 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
2974 4510 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
2975 4511 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
2976 4512 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
2977 4513 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
2978 4514 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
2979 4515 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
2980 4516 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
2981 4517 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
2982 4518 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
2983 4519 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
2984 4520 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
2985 4521 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
2986 4522 4.142513 ACCTACGGTGACTTCGTAAATCTC 60.143 45.833 0.00 0.00 41.62 2.75
2987 4523 3.760684 ACCTACGGTGACTTCGTAAATCT 59.239 43.478 0.00 0.00 41.62 2.40
2988 4524 4.102035 ACCTACGGTGACTTCGTAAATC 57.898 45.455 0.00 0.00 41.62 2.17
3001 4537 3.437795 CGACGAGGCACCTACGGT 61.438 66.667 11.43 1.54 35.62 4.83
3002 4538 3.392595 GACGACGAGGCACCTACGG 62.393 68.421 0.00 0.00 0.00 4.02
3003 4539 2.099831 GACGACGAGGCACCTACG 59.900 66.667 0.00 8.24 0.00 3.51
3004 4540 2.099831 CGACGACGAGGCACCTAC 59.900 66.667 0.00 0.00 42.66 3.18
3005 4541 2.046988 TCGACGACGAGGCACCTA 60.047 61.111 5.75 0.00 43.81 3.08
3015 4551 0.522915 GAGACATTCCCGTCGACGAC 60.523 60.000 37.65 18.04 43.02 4.34
3016 4552 1.651240 GGAGACATTCCCGTCGACGA 61.651 60.000 37.65 19.79 40.37 4.20
3017 4553 1.226603 GGAGACATTCCCGTCGACG 60.227 63.158 30.33 30.33 40.37 5.12
3018 4554 4.808649 GGAGACATTCCCGTCGAC 57.191 61.111 5.18 5.18 40.37 4.20
3026 4562 3.604582 CTTTCAGTGGGAGGAGACATTC 58.395 50.000 0.00 0.00 0.00 2.67
3027 4563 2.290577 GCTTTCAGTGGGAGGAGACATT 60.291 50.000 0.00 0.00 0.00 2.71
3028 4564 1.280421 GCTTTCAGTGGGAGGAGACAT 59.720 52.381 0.00 0.00 0.00 3.06
3029 4565 0.687354 GCTTTCAGTGGGAGGAGACA 59.313 55.000 0.00 0.00 0.00 3.41
3030 4566 0.687354 TGCTTTCAGTGGGAGGAGAC 59.313 55.000 0.00 0.00 0.00 3.36
3031 4567 0.687354 GTGCTTTCAGTGGGAGGAGA 59.313 55.000 0.00 0.00 0.00 3.71
3032 4568 0.397941 TGTGCTTTCAGTGGGAGGAG 59.602 55.000 0.00 0.00 0.00 3.69
3033 4569 1.003580 GATGTGCTTTCAGTGGGAGGA 59.996 52.381 0.00 0.00 0.00 3.71
3034 4570 1.457346 GATGTGCTTTCAGTGGGAGG 58.543 55.000 0.00 0.00 0.00 4.30
3035 4571 1.081892 CGATGTGCTTTCAGTGGGAG 58.918 55.000 0.00 0.00 0.00 4.30
3036 4572 0.955428 GCGATGTGCTTTCAGTGGGA 60.955 55.000 0.00 0.00 41.73 4.37
3037 4573 1.503542 GCGATGTGCTTTCAGTGGG 59.496 57.895 0.00 0.00 41.73 4.61
3038 4574 1.503542 GGCGATGTGCTTTCAGTGG 59.496 57.895 0.00 0.00 45.43 4.00
3039 4575 1.133253 CGGCGATGTGCTTTCAGTG 59.867 57.895 0.00 0.00 45.43 3.66
3040 4576 2.034879 CCGGCGATGTGCTTTCAGT 61.035 57.895 9.30 0.00 45.43 3.41
3041 4577 1.298157 TTCCGGCGATGTGCTTTCAG 61.298 55.000 9.30 0.00 45.43 3.02
3042 4578 0.676466 ATTCCGGCGATGTGCTTTCA 60.676 50.000 9.30 0.00 45.43 2.69
3043 4579 0.028110 GATTCCGGCGATGTGCTTTC 59.972 55.000 9.30 0.00 45.43 2.62
3044 4580 1.376609 GGATTCCGGCGATGTGCTTT 61.377 55.000 9.30 0.00 45.43 3.51
3045 4581 1.819632 GGATTCCGGCGATGTGCTT 60.820 57.895 9.30 0.00 45.43 3.91
3046 4582 2.203070 GGATTCCGGCGATGTGCT 60.203 61.111 9.30 0.00 45.43 4.40
3047 4583 2.203070 AGGATTCCGGCGATGTGC 60.203 61.111 9.30 0.00 45.38 4.57
3048 4584 0.461870 TTCAGGATTCCGGCGATGTG 60.462 55.000 9.30 0.00 0.00 3.21
3049 4585 0.251916 TTTCAGGATTCCGGCGATGT 59.748 50.000 9.30 0.00 0.00 3.06
3050 4586 1.597742 ATTTCAGGATTCCGGCGATG 58.402 50.000 9.30 0.00 0.00 3.84
3051 4587 3.485463 TTATTTCAGGATTCCGGCGAT 57.515 42.857 9.30 0.00 0.00 4.58
3052 4588 2.992124 TTATTTCAGGATTCCGGCGA 57.008 45.000 9.30 0.00 0.00 5.54
3053 4589 4.036262 TGAATTTATTTCAGGATTCCGGCG 59.964 41.667 0.00 0.00 39.44 6.46
3054 4590 5.514274 TGAATTTATTTCAGGATTCCGGC 57.486 39.130 0.00 0.00 39.44 6.13
3064 4600 9.236691 GCTCGCATTATTTCTGAATTTATTTCA 57.763 29.630 0.00 0.00 42.09 2.69
3065 4601 9.236691 TGCTCGCATTATTTCTGAATTTATTTC 57.763 29.630 0.00 0.00 34.72 2.17
3066 4602 9.023967 GTGCTCGCATTATTTCTGAATTTATTT 57.976 29.630 0.00 0.00 0.00 1.40
3067 4603 7.649306 GGTGCTCGCATTATTTCTGAATTTATT 59.351 33.333 0.00 0.00 0.00 1.40
3068 4604 7.141363 GGTGCTCGCATTATTTCTGAATTTAT 58.859 34.615 0.00 0.00 0.00 1.40
3069 4605 6.094742 TGGTGCTCGCATTATTTCTGAATTTA 59.905 34.615 0.00 0.00 0.00 1.40
3070 4606 5.105797 TGGTGCTCGCATTATTTCTGAATTT 60.106 36.000 0.00 0.00 0.00 1.82
3071 4607 4.398988 TGGTGCTCGCATTATTTCTGAATT 59.601 37.500 0.00 0.00 0.00 2.17
3072 4608 3.947196 TGGTGCTCGCATTATTTCTGAAT 59.053 39.130 0.00 0.00 0.00 2.57
3073 4609 3.342719 TGGTGCTCGCATTATTTCTGAA 58.657 40.909 0.00 0.00 0.00 3.02
3074 4610 2.984562 TGGTGCTCGCATTATTTCTGA 58.015 42.857 0.00 0.00 0.00 3.27
3075 4611 3.374988 TCTTGGTGCTCGCATTATTTCTG 59.625 43.478 0.00 0.00 0.00 3.02
3076 4612 3.609853 TCTTGGTGCTCGCATTATTTCT 58.390 40.909 0.00 0.00 0.00 2.52
3077 4613 4.558538 ATCTTGGTGCTCGCATTATTTC 57.441 40.909 0.00 0.00 0.00 2.17
3078 4614 4.989279 AATCTTGGTGCTCGCATTATTT 57.011 36.364 0.00 0.00 0.00 1.40
3079 4615 4.989279 AAATCTTGGTGCTCGCATTATT 57.011 36.364 0.00 0.00 0.00 1.40
3080 4616 6.265577 GTTTAAATCTTGGTGCTCGCATTAT 58.734 36.000 0.00 0.00 0.00 1.28
3081 4617 5.392595 GGTTTAAATCTTGGTGCTCGCATTA 60.393 40.000 0.00 0.00 0.00 1.90
3082 4618 4.485163 GTTTAAATCTTGGTGCTCGCATT 58.515 39.130 0.00 0.00 0.00 3.56
3083 4619 3.119495 GGTTTAAATCTTGGTGCTCGCAT 60.119 43.478 0.00 0.00 0.00 4.73
3084 4620 2.227865 GGTTTAAATCTTGGTGCTCGCA 59.772 45.455 0.00 0.00 0.00 5.10
3085 4621 2.488153 AGGTTTAAATCTTGGTGCTCGC 59.512 45.455 0.00 0.00 0.00 5.03
3086 4622 4.475944 CAAGGTTTAAATCTTGGTGCTCG 58.524 43.478 26.90 5.83 42.15 5.03
3103 4639 0.478789 TATCCCCAACCCACCAAGGT 60.479 55.000 0.00 0.00 44.00 3.50
3104 4640 0.033503 GTATCCCCAACCCACCAAGG 60.034 60.000 0.00 0.00 37.03 3.61
3105 4641 0.033503 GGTATCCCCAACCCACCAAG 60.034 60.000 0.00 0.00 0.00 3.61
3106 4642 0.776479 TGGTATCCCCAACCCACCAA 60.776 55.000 0.00 0.00 41.50 3.67
3107 4643 1.151565 TGGTATCCCCAACCCACCA 60.152 57.895 0.00 0.00 41.50 4.17
3108 4644 3.844063 TGGTATCCCCAACCCACC 58.156 61.111 0.00 0.00 41.50 4.61
3115 4651 0.912487 GGTGGACAGTGGTATCCCCA 60.912 60.000 0.00 0.00 42.51 4.96
3116 4652 0.620700 AGGTGGACAGTGGTATCCCC 60.621 60.000 0.00 0.00 33.69 4.81
3117 4653 2.169978 GTTAGGTGGACAGTGGTATCCC 59.830 54.545 0.00 0.00 33.69 3.85
3118 4654 2.169978 GGTTAGGTGGACAGTGGTATCC 59.830 54.545 0.00 0.00 35.37 2.59
3119 4655 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
3120 4656 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
3121 4657 2.369532 GTTGGTTAGGTGGACAGTGGTA 59.630 50.000 0.00 0.00 0.00 3.25
3122 4658 1.142262 GTTGGTTAGGTGGACAGTGGT 59.858 52.381 0.00 0.00 0.00 4.16
3123 4659 1.420138 AGTTGGTTAGGTGGACAGTGG 59.580 52.381 0.00 0.00 0.00 4.00
3124 4660 2.104111 TGAGTTGGTTAGGTGGACAGTG 59.896 50.000 0.00 0.00 0.00 3.66
3125 4661 2.404559 TGAGTTGGTTAGGTGGACAGT 58.595 47.619 0.00 0.00 0.00 3.55
3126 4662 3.139077 GTTGAGTTGGTTAGGTGGACAG 58.861 50.000 0.00 0.00 0.00 3.51
3127 4663 2.158726 GGTTGAGTTGGTTAGGTGGACA 60.159 50.000 0.00 0.00 0.00 4.02
3128 4664 2.158726 TGGTTGAGTTGGTTAGGTGGAC 60.159 50.000 0.00 0.00 0.00 4.02
3129 4665 2.128535 TGGTTGAGTTGGTTAGGTGGA 58.871 47.619 0.00 0.00 0.00 4.02
3130 4666 2.227194 GTGGTTGAGTTGGTTAGGTGG 58.773 52.381 0.00 0.00 0.00 4.61
3131 4667 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
3132 4668 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
3133 4669 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
3134 4670 3.208747 ACCTGTGGTTGAGTTGGTTAG 57.791 47.619 0.00 0.00 27.29 2.34
3135 4671 3.655615 AACCTGTGGTTGAGTTGGTTA 57.344 42.857 0.71 0.00 45.07 2.85
3136 4672 2.525105 AACCTGTGGTTGAGTTGGTT 57.475 45.000 0.71 0.00 45.07 3.67
3146 4682 1.167851 CATGCGAATCAACCTGTGGT 58.832 50.000 0.00 0.00 37.65 4.16
3147 4683 1.167851 ACATGCGAATCAACCTGTGG 58.832 50.000 0.00 0.00 0.00 4.17
3148 4684 2.414559 GGAACATGCGAATCAACCTGTG 60.415 50.000 0.00 0.00 0.00 3.66
3149 4685 1.812571 GGAACATGCGAATCAACCTGT 59.187 47.619 0.00 0.00 0.00 4.00
3150 4686 1.811965 TGGAACATGCGAATCAACCTG 59.188 47.619 0.00 0.00 0.00 4.00
3151 4687 2.198827 TGGAACATGCGAATCAACCT 57.801 45.000 0.00 0.00 0.00 3.50
3158 4694 7.172875 ATTTCAATGAAAAATGGAACATGCGAA 59.827 29.630 12.75 0.00 37.95 4.70
3159 4695 6.649973 ATTTCAATGAAAAATGGAACATGCGA 59.350 30.769 12.75 0.00 37.95 5.10
3160 4696 6.739100 CATTTCAATGAAAAATGGAACATGCG 59.261 34.615 12.75 0.00 40.43 4.73
3161 4697 7.808672 TCATTTCAATGAAAAATGGAACATGC 58.191 30.769 12.75 0.00 42.55 4.06
3222 4758 2.185004 CTATTCCGGCCCATTGTAGG 57.815 55.000 0.00 0.00 0.00 3.18
3570 7146 1.498865 GATTGTGGACGCGGCCATAG 61.499 60.000 40.33 0.00 40.68 2.23
3598 7183 5.355910 GCACGGTTTTGAGGGATTAGATTTA 59.644 40.000 0.00 0.00 0.00 1.40
3605 7190 2.871096 TAGCACGGTTTTGAGGGATT 57.129 45.000 0.00 0.00 0.00 3.01
3607 7192 1.065709 GGATAGCACGGTTTTGAGGGA 60.066 52.381 0.00 0.00 0.00 4.20
3676 7263 5.979517 GCATGGAATTTAGGTTGAACTATGC 59.020 40.000 0.00 0.00 0.00 3.14
3699 7286 2.605818 TGAACCGTGTTTATATGCTCGC 59.394 45.455 0.00 0.00 0.00 5.03
3738 7325 6.866010 TTTATCTATGCTGCAACGATGAAT 57.134 33.333 20.42 6.72 0.00 2.57
3796 7384 2.103042 GTGATGTCTCAGTGCCGCC 61.103 63.158 0.00 0.00 30.18 6.13
3800 7388 2.072298 GAAGTGGTGATGTCTCAGTGC 58.928 52.381 0.00 0.00 30.18 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.