Multiple sequence alignment - TraesCS2A01G100000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G100000 chr2A 100.000 4547 0 0 1 4547 52745149 52749695 0.000000e+00 8397.0
1 TraesCS2A01G100000 chr2A 84.836 244 34 2 2173 2414 52559598 52559356 4.540000e-60 243.0
2 TraesCS2A01G100000 chr2A 89.474 57 4 2 3865 3919 57925578 57925634 2.270000e-08 71.3
3 TraesCS2A01G100000 chr2D 93.547 3611 162 25 982 4547 51248991 51252575 0.000000e+00 5312.0
4 TraesCS2A01G100000 chr2D 86.567 335 35 7 510 838 51248520 51248850 1.200000e-95 361.0
5 TraesCS2A01G100000 chr2D 91.855 221 18 0 982 1202 51248294 51248514 4.420000e-80 309.0
6 TraesCS2A01G100000 chr2D 92.593 135 10 0 827 961 51248871 51249005 1.290000e-45 195.0
7 TraesCS2A01G100000 chr2D 90.826 109 10 0 853 961 51248200 51248308 3.670000e-31 147.0
8 TraesCS2A01G100000 chr2D 80.451 133 20 5 3838 3969 404896868 404896741 3.740000e-16 97.1
9 TraesCS2A01G100000 chr2D 81.818 99 7 9 3869 3964 56528598 56528688 6.310000e-09 73.1
10 TraesCS2A01G100000 chr2B 92.149 1885 98 21 2687 4547 80197993 80199851 0.000000e+00 2615.0
11 TraesCS2A01G100000 chr2B 94.660 618 24 5 1465 2080 80196714 80197324 0.000000e+00 950.0
12 TraesCS2A01G100000 chr2B 93.361 241 11 3 982 1221 80196071 80196307 7.240000e-93 351.0
13 TraesCS2A01G100000 chr2B 90.455 220 18 3 1222 1440 80196341 80196558 2.070000e-73 287.0
14 TraesCS2A01G100000 chr2B 86.066 244 31 3 2173 2414 79678258 79678016 4.510000e-65 259.0
15 TraesCS2A01G100000 chr2B 85.897 78 9 2 198 273 233180172 233180095 1.050000e-11 82.4
16 TraesCS2A01G100000 chr5D 78.509 228 30 14 593 809 6298094 6297875 1.030000e-26 132.0
17 TraesCS2A01G100000 chr5D 77.021 235 32 15 587 809 350679690 350679466 1.030000e-21 115.0
18 TraesCS2A01G100000 chr3D 79.592 196 28 7 618 806 511351133 511351323 3.690000e-26 130.0
19 TraesCS2A01G100000 chr3D 77.632 152 24 5 200 350 586327432 586327574 2.920000e-12 84.2
20 TraesCS2A01G100000 chr7D 77.391 230 36 10 587 806 182824685 182824908 6.180000e-24 122.0
21 TraesCS2A01G100000 chr7D 78.723 188 29 7 628 809 42201626 42201444 1.030000e-21 115.0
22 TraesCS2A01G100000 chr7D 76.856 229 33 14 593 809 538343569 538343349 1.340000e-20 111.0
23 TraesCS2A01G100000 chr7D 78.205 156 23 10 206 360 524326983 524326838 6.270000e-14 89.8
24 TraesCS2A01G100000 chr7D 79.688 128 18 7 177 299 384054388 384054264 8.100000e-13 86.1
25 TraesCS2A01G100000 chr7B 77.533 227 34 12 593 809 608186364 608186145 2.220000e-23 121.0
26 TraesCS2A01G100000 chr6D 76.652 227 36 13 587 806 88830222 88830438 4.810000e-20 110.0
27 TraesCS2A01G100000 chr4D 88.000 75 9 0 204 278 441645690 441645764 6.270000e-14 89.8
28 TraesCS2A01G100000 chr4D 84.615 78 10 2 201 277 506765981 506765905 4.880000e-10 76.8
29 TraesCS2A01G100000 chr1A 86.667 75 10 0 213 287 12144781 12144855 2.920000e-12 84.2
30 TraesCS2A01G100000 chr1B 78.014 141 19 9 3831 3967 156569206 156569074 1.360000e-10 78.7
31 TraesCS2A01G100000 chr6A 81.915 94 13 2 189 278 2407586 2407679 4.880000e-10 76.8
32 TraesCS2A01G100000 chr6B 79.464 112 18 4 179 286 165326992 165327102 1.750000e-09 75.0
33 TraesCS2A01G100000 chr1D 92.857 42 3 0 312 353 44976705 44976664 1.370000e-05 62.1
34 TraesCS2A01G100000 chr1D 92.857 42 3 0 312 353 45085395 45085354 1.370000e-05 62.1
35 TraesCS2A01G100000 chr4B 100.000 28 0 0 811 838 602728277 602728304 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G100000 chr2A 52745149 52749695 4546 False 8397.00 8397 100.00000 1 4547 1 chr2A.!!$F1 4546
1 TraesCS2A01G100000 chr2D 51248200 51252575 4375 False 1264.80 5312 91.07760 510 4547 5 chr2D.!!$F2 4037
2 TraesCS2A01G100000 chr2B 80196071 80199851 3780 False 1050.75 2615 92.65625 982 4547 4 chr2B.!!$F1 3565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 266 0.109086 CGAAGTCGCCACAGACATCT 60.109 55.000 0.00 0.00 43.24 2.90 F
1124 1162 0.108615 TTCCAGCAGACTAGCTTCGC 60.109 55.000 0.00 0.00 43.70 4.70 F
1707 1936 0.390860 GATCGGCATAGAGGTGTGCT 59.609 55.000 0.00 0.00 40.53 4.40 F
1865 2094 0.742990 GTAGCCGTGCCACATTAGCA 60.743 55.000 0.00 0.00 38.08 3.49 F
3095 3456 3.244976 GTTTATCGCTTGCTGCAACAAT 58.755 40.909 11.69 7.67 43.06 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1259 1331 0.109873 CACGACTATATCCCGACGGC 60.110 60.000 8.86 0.00 0.00 5.68 R
1926 2159 1.732259 ACGGCAAGAAATTCGCTACAG 59.268 47.619 0.00 0.00 0.00 2.74 R
3134 3495 1.611261 TACAGGTGCGGTTAGGCCT 60.611 57.895 11.78 11.78 34.25 5.19 R
3529 3890 1.856873 ATCACCAAGCCTCCCCCAA 60.857 57.895 0.00 0.00 0.00 4.12 R
4282 4660 0.755686 GCCAGAAGACGATGATCCCT 59.244 55.000 0.00 0.00 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 8.967552 TTTATTTTTGAACACAGTACAAACGT 57.032 26.923 0.00 0.00 34.09 3.99
71 72 9.705471 TTATTTTTGAACACAGTACAAACGTAG 57.295 29.630 0.00 0.00 34.09 3.51
72 73 6.964741 TTTTGAACACAGTACAAACGTAGA 57.035 33.333 0.00 0.00 34.09 2.59
73 74 7.542534 TTTTGAACACAGTACAAACGTAGAT 57.457 32.000 0.00 0.00 34.09 1.98
74 75 8.645730 TTTTGAACACAGTACAAACGTAGATA 57.354 30.769 0.00 0.00 34.09 1.98
75 76 7.627585 TTGAACACAGTACAAACGTAGATAC 57.372 36.000 0.00 0.00 0.00 2.24
76 77 6.973843 TGAACACAGTACAAACGTAGATACT 58.026 36.000 0.00 0.00 0.00 2.12
77 78 7.080099 TGAACACAGTACAAACGTAGATACTC 58.920 38.462 0.00 0.00 0.00 2.59
78 79 6.564709 ACACAGTACAAACGTAGATACTCA 57.435 37.500 0.00 0.00 0.00 3.41
79 80 6.376978 ACACAGTACAAACGTAGATACTCAC 58.623 40.000 0.00 0.00 0.00 3.51
80 81 6.016860 ACACAGTACAAACGTAGATACTCACA 60.017 38.462 0.00 0.00 0.00 3.58
81 82 6.304922 CACAGTACAAACGTAGATACTCACAC 59.695 42.308 0.00 0.00 0.00 3.82
82 83 6.016860 ACAGTACAAACGTAGATACTCACACA 60.017 38.462 0.00 0.00 0.00 3.72
84 85 5.190992 ACAAACGTAGATACTCACACACA 57.809 39.130 0.00 0.00 0.00 3.72
87 88 5.386958 AACGTAGATACTCACACACACAT 57.613 39.130 0.00 0.00 0.00 3.21
88 89 6.505044 AACGTAGATACTCACACACACATA 57.495 37.500 0.00 0.00 0.00 2.29
89 90 6.694877 ACGTAGATACTCACACACACATAT 57.305 37.500 0.00 0.00 0.00 1.78
90 91 7.797038 ACGTAGATACTCACACACACATATA 57.203 36.000 0.00 0.00 0.00 0.86
91 92 8.392372 ACGTAGATACTCACACACACATATAT 57.608 34.615 0.00 0.00 0.00 0.86
92 93 9.498176 ACGTAGATACTCACACACACATATATA 57.502 33.333 0.00 0.00 0.00 0.86
96 97 9.355916 AGATACTCACACACACATATATACACT 57.644 33.333 0.00 0.00 0.00 3.55
97 98 9.613957 GATACTCACACACACATATATACACTC 57.386 37.037 0.00 0.00 0.00 3.51
98 99 7.404671 ACTCACACACACATATATACACTCA 57.595 36.000 0.00 0.00 0.00 3.41
99 100 7.836842 ACTCACACACACATATATACACTCAA 58.163 34.615 0.00 0.00 0.00 3.02
100 101 7.759886 ACTCACACACACATATATACACTCAAC 59.240 37.037 0.00 0.00 0.00 3.18
101 102 7.039270 TCACACACACATATATACACTCAACC 58.961 38.462 0.00 0.00 0.00 3.77
102 103 6.257849 CACACACACATATATACACTCAACCC 59.742 42.308 0.00 0.00 0.00 4.11
103 104 6.156256 ACACACACATATATACACTCAACCCT 59.844 38.462 0.00 0.00 0.00 4.34
104 105 7.343574 ACACACACATATATACACTCAACCCTA 59.656 37.037 0.00 0.00 0.00 3.53
105 106 8.367911 CACACACATATATACACTCAACCCTAT 58.632 37.037 0.00 0.00 0.00 2.57
106 107 8.367911 ACACACATATATACACTCAACCCTATG 58.632 37.037 0.00 0.00 0.00 2.23
108 109 9.154632 ACACATATATACACTCAACCCTATGAA 57.845 33.333 0.00 0.00 0.00 2.57
110 111 9.154632 ACATATATACACTCAACCCTATGAACA 57.845 33.333 0.00 0.00 0.00 3.18
111 112 9.424319 CATATATACACTCAACCCTATGAACAC 57.576 37.037 0.00 0.00 0.00 3.32
112 113 5.755409 ATACACTCAACCCTATGAACACA 57.245 39.130 0.00 0.00 0.00 3.72
114 115 4.787551 ACACTCAACCCTATGAACACAAA 58.212 39.130 0.00 0.00 0.00 2.83
115 116 4.578928 ACACTCAACCCTATGAACACAAAC 59.421 41.667 0.00 0.00 0.00 2.93
117 118 4.578928 ACTCAACCCTATGAACACAAACAC 59.421 41.667 0.00 0.00 0.00 3.32
118 119 3.562141 TCAACCCTATGAACACAAACACG 59.438 43.478 0.00 0.00 0.00 4.49
123 124 0.383949 ATGAACACAAACACGCACCC 59.616 50.000 0.00 0.00 0.00 4.61
124 125 0.678366 TGAACACAAACACGCACCCT 60.678 50.000 0.00 0.00 0.00 4.34
125 126 1.301423 GAACACAAACACGCACCCTA 58.699 50.000 0.00 0.00 0.00 3.53
126 127 1.671845 GAACACAAACACGCACCCTAA 59.328 47.619 0.00 0.00 0.00 2.69
127 128 1.975660 ACACAAACACGCACCCTAAT 58.024 45.000 0.00 0.00 0.00 1.73
129 130 1.606668 CACAAACACGCACCCTAATGT 59.393 47.619 0.00 0.00 0.00 2.71
130 131 2.809119 CACAAACACGCACCCTAATGTA 59.191 45.455 0.00 0.00 0.00 2.29
131 132 3.438781 CACAAACACGCACCCTAATGTAT 59.561 43.478 0.00 0.00 0.00 2.29
132 133 4.076394 ACAAACACGCACCCTAATGTATT 58.924 39.130 0.00 0.00 0.00 1.89
133 134 4.521256 ACAAACACGCACCCTAATGTATTT 59.479 37.500 0.00 0.00 0.00 1.40
135 136 6.376018 ACAAACACGCACCCTAATGTATTTAT 59.624 34.615 0.00 0.00 0.00 1.40
136 137 7.094118 ACAAACACGCACCCTAATGTATTTATT 60.094 33.333 0.00 0.00 0.00 1.40
137 138 7.399245 AACACGCACCCTAATGTATTTATTT 57.601 32.000 0.00 0.00 0.00 1.40
138 139 8.508883 AACACGCACCCTAATGTATTTATTTA 57.491 30.769 0.00 0.00 0.00 1.40
139 140 8.685838 ACACGCACCCTAATGTATTTATTTAT 57.314 30.769 0.00 0.00 0.00 1.40
140 141 9.127277 ACACGCACCCTAATGTATTTATTTATT 57.873 29.630 0.00 0.00 0.00 1.40
141 142 9.959749 CACGCACCCTAATGTATTTATTTATTT 57.040 29.630 0.00 0.00 0.00 1.40
160 161 9.790389 ATTTATTTTGAACACAGTACAAACGAA 57.210 25.926 0.00 0.00 34.09 3.85
161 162 8.829514 TTATTTTGAACACAGTACAAACGAAG 57.170 30.769 0.00 0.00 34.09 3.79
162 163 6.483385 TTTTGAACACAGTACAAACGAAGA 57.517 33.333 0.00 0.00 34.09 2.87
163 164 6.671614 TTTGAACACAGTACAAACGAAGAT 57.328 33.333 0.00 0.00 0.00 2.40
164 165 5.651172 TGAACACAGTACAAACGAAGATG 57.349 39.130 0.00 0.00 0.00 2.90
165 166 4.025229 TGAACACAGTACAAACGAAGATGC 60.025 41.667 0.00 0.00 0.00 3.91
166 167 3.728845 ACACAGTACAAACGAAGATGCT 58.271 40.909 0.00 0.00 0.00 3.79
168 169 3.740832 CACAGTACAAACGAAGATGCTCA 59.259 43.478 0.00 0.00 0.00 4.26
169 170 3.741344 ACAGTACAAACGAAGATGCTCAC 59.259 43.478 0.00 0.00 0.00 3.51
170 171 3.740832 CAGTACAAACGAAGATGCTCACA 59.259 43.478 0.00 0.00 0.00 3.58
172 173 2.560504 ACAAACGAAGATGCTCACACA 58.439 42.857 0.00 0.00 0.00 3.72
173 174 2.287915 ACAAACGAAGATGCTCACACAC 59.712 45.455 0.00 0.00 0.00 3.82
174 175 2.238942 AACGAAGATGCTCACACACA 57.761 45.000 0.00 0.00 0.00 3.72
176 177 1.202521 ACGAAGATGCTCACACACACA 60.203 47.619 0.00 0.00 0.00 3.72
177 178 1.193203 CGAAGATGCTCACACACACAC 59.807 52.381 0.00 0.00 0.00 3.82
179 180 1.586422 AGATGCTCACACACACACAC 58.414 50.000 0.00 0.00 0.00 3.82
180 181 1.134431 AGATGCTCACACACACACACA 60.134 47.619 0.00 0.00 0.00 3.72
182 183 1.348250 GCTCACACACACACACACG 59.652 57.895 0.00 0.00 0.00 4.49
185 186 0.742635 TCACACACACACACACGCAT 60.743 50.000 0.00 0.00 0.00 4.73
186 187 0.933796 CACACACACACACACGCATA 59.066 50.000 0.00 0.00 0.00 3.14
187 188 1.530720 CACACACACACACACGCATAT 59.469 47.619 0.00 0.00 0.00 1.78
188 189 2.734079 CACACACACACACACGCATATA 59.266 45.455 0.00 0.00 0.00 0.86
190 191 2.734079 CACACACACACACGCATATACA 59.266 45.455 0.00 0.00 0.00 2.29
191 192 2.734606 ACACACACACACGCATATACAC 59.265 45.455 0.00 0.00 0.00 2.90
192 193 2.993220 CACACACACACGCATATACACT 59.007 45.455 0.00 0.00 0.00 3.55
193 194 3.060761 CACACACACACGCATATACACTC 59.939 47.826 0.00 0.00 0.00 3.51
194 195 3.249917 CACACACACGCATATACACTCA 58.750 45.455 0.00 0.00 0.00 3.41
195 196 3.677596 CACACACACGCATATACACTCAA 59.322 43.478 0.00 0.00 0.00 3.02
196 197 4.329801 CACACACACGCATATACACTCAAT 59.670 41.667 0.00 0.00 0.00 2.57
198 199 4.025730 CACACACGCATATACACTCAATCC 60.026 45.833 0.00 0.00 0.00 3.01
199 200 4.141937 ACACACGCATATACACTCAATCCT 60.142 41.667 0.00 0.00 0.00 3.24
200 201 4.811024 CACACGCATATACACTCAATCCTT 59.189 41.667 0.00 0.00 0.00 3.36
202 203 6.646653 CACACGCATATACACTCAATCCTTAT 59.353 38.462 0.00 0.00 0.00 1.73
203 204 7.812669 CACACGCATATACACTCAATCCTTATA 59.187 37.037 0.00 0.00 0.00 0.98
205 206 7.009631 CACGCATATACACTCAATCCTTATAGC 59.990 40.741 0.00 0.00 0.00 2.97
206 207 7.035612 CGCATATACACTCAATCCTTATAGCA 58.964 38.462 0.00 0.00 0.00 3.49
208 209 7.278868 GCATATACACTCAATCCTTATAGCACC 59.721 40.741 0.00 0.00 0.00 5.01
209 210 8.535335 CATATACACTCAATCCTTATAGCACCT 58.465 37.037 0.00 0.00 0.00 4.00
210 211 5.283457 ACACTCAATCCTTATAGCACCTC 57.717 43.478 0.00 0.00 0.00 3.85
211 212 4.965532 ACACTCAATCCTTATAGCACCTCT 59.034 41.667 0.00 0.00 0.00 3.69
212 213 5.163364 ACACTCAATCCTTATAGCACCTCTG 60.163 44.000 0.00 0.00 0.00 3.35
213 214 5.069648 CACTCAATCCTTATAGCACCTCTGA 59.930 44.000 0.00 0.00 0.00 3.27
215 216 5.458595 TCAATCCTTATAGCACCTCTGAGA 58.541 41.667 6.17 0.00 0.00 3.27
217 218 7.241628 TCAATCCTTATAGCACCTCTGAGATA 58.758 38.462 6.17 0.00 0.00 1.98
218 219 7.177568 TCAATCCTTATAGCACCTCTGAGATAC 59.822 40.741 6.17 0.00 0.00 2.24
220 221 6.007076 TCCTTATAGCACCTCTGAGATACTG 58.993 44.000 6.17 0.00 0.00 2.74
221 222 6.007076 CCTTATAGCACCTCTGAGATACTGA 58.993 44.000 6.17 0.00 0.00 3.41
222 223 6.150976 CCTTATAGCACCTCTGAGATACTGAG 59.849 46.154 6.17 0.00 41.94 3.35
223 224 2.031120 AGCACCTCTGAGATACTGAGC 58.969 52.381 6.17 0.00 41.28 4.26
224 225 1.068434 GCACCTCTGAGATACTGAGCC 59.932 57.143 6.17 0.00 41.28 4.70
225 226 1.336440 CACCTCTGAGATACTGAGCCG 59.664 57.143 6.17 0.00 41.28 5.52
227 228 0.313672 CTCTGAGATACTGAGCCGGC 59.686 60.000 21.89 21.89 37.65 6.13
228 229 0.395724 TCTGAGATACTGAGCCGGCA 60.396 55.000 31.54 7.75 0.00 5.69
229 230 0.249238 CTGAGATACTGAGCCGGCAC 60.249 60.000 31.54 24.60 0.00 5.01
232 233 0.833287 AGATACTGAGCCGGCACAAT 59.167 50.000 31.54 22.19 0.00 2.71
233 234 2.035961 GAGATACTGAGCCGGCACAATA 59.964 50.000 31.54 23.82 0.00 1.90
236 237 0.833287 ACTGAGCCGGCACAATATCT 59.167 50.000 31.54 4.27 0.00 1.98
238 239 1.600957 CTGAGCCGGCACAATATCTTG 59.399 52.381 31.54 11.01 38.39 3.02
239 240 1.209261 TGAGCCGGCACAATATCTTGA 59.791 47.619 31.54 0.00 36.20 3.02
240 241 1.869767 GAGCCGGCACAATATCTTGAG 59.130 52.381 31.54 0.00 36.20 3.02
241 242 1.486310 AGCCGGCACAATATCTTGAGA 59.514 47.619 31.54 0.00 36.20 3.27
242 243 1.599542 GCCGGCACAATATCTTGAGAC 59.400 52.381 24.80 0.00 36.20 3.36
243 244 2.743183 GCCGGCACAATATCTTGAGACT 60.743 50.000 24.80 0.00 36.20 3.24
244 245 2.868583 CCGGCACAATATCTTGAGACTG 59.131 50.000 0.00 0.00 36.20 3.51
245 246 3.430790 CCGGCACAATATCTTGAGACTGA 60.431 47.826 0.00 0.00 36.20 3.41
246 247 3.553511 CGGCACAATATCTTGAGACTGAC 59.446 47.826 0.00 0.00 36.20 3.51
247 248 3.553511 GGCACAATATCTTGAGACTGACG 59.446 47.826 0.00 0.00 36.20 4.35
249 250 4.864806 GCACAATATCTTGAGACTGACGAA 59.135 41.667 0.00 0.00 36.20 3.85
250 251 5.005203 GCACAATATCTTGAGACTGACGAAG 59.995 44.000 0.00 0.00 36.20 3.79
251 252 6.096036 CACAATATCTTGAGACTGACGAAGT 58.904 40.000 0.00 0.00 38.92 3.01
252 253 6.252441 CACAATATCTTGAGACTGACGAAGTC 59.748 42.308 13.02 13.02 45.94 3.01
262 263 3.125607 ACGAAGTCGCCACAGACA 58.874 55.556 0.00 0.00 43.24 3.41
263 264 1.666011 ACGAAGTCGCCACAGACAT 59.334 52.632 0.00 0.00 43.24 3.06
265 266 0.109086 CGAAGTCGCCACAGACATCT 60.109 55.000 0.00 0.00 43.24 2.90
266 267 1.670087 CGAAGTCGCCACAGACATCTT 60.670 52.381 0.00 0.00 43.24 2.40
268 269 0.109086 AGTCGCCACAGACATCTTCG 60.109 55.000 0.00 0.00 43.24 3.79
270 271 1.135489 GTCGCCACAGACATCTTCGTA 60.135 52.381 0.00 0.00 40.65 3.43
271 272 1.132453 TCGCCACAGACATCTTCGTAG 59.868 52.381 0.00 0.00 0.00 3.51
272 273 1.135373 CGCCACAGACATCTTCGTAGT 60.135 52.381 0.00 0.00 0.00 2.73
273 274 2.531206 GCCACAGACATCTTCGTAGTC 58.469 52.381 0.00 0.00 0.00 2.59
275 276 2.418976 CCACAGACATCTTCGTAGTCGA 59.581 50.000 0.00 0.00 44.66 4.20
303 304 8.608844 AGAACGTCTTTTCTCAATGAATAGTT 57.391 30.769 0.00 0.00 35.91 2.24
304 305 8.499162 AGAACGTCTTTTCTCAATGAATAGTTG 58.501 33.333 0.00 0.00 35.91 3.16
305 306 7.962964 ACGTCTTTTCTCAATGAATAGTTGA 57.037 32.000 0.00 0.00 35.91 3.18
306 307 8.378172 ACGTCTTTTCTCAATGAATAGTTGAA 57.622 30.769 0.00 0.00 35.36 2.69
307 308 9.003658 ACGTCTTTTCTCAATGAATAGTTGAAT 57.996 29.630 0.00 0.00 35.36 2.57
311 312 9.214953 CTTTTCTCAATGAATAGTTGAATACGC 57.785 33.333 0.00 0.00 35.36 4.42
312 313 7.841915 TTCTCAATGAATAGTTGAATACGCA 57.158 32.000 0.00 0.00 35.36 5.24
313 314 8.437360 TTCTCAATGAATAGTTGAATACGCAT 57.563 30.769 0.00 0.00 35.36 4.73
314 315 8.076714 TCTCAATGAATAGTTGAATACGCATC 57.923 34.615 0.00 0.00 35.36 3.91
315 316 6.876804 TCAATGAATAGTTGAATACGCATCG 58.123 36.000 0.00 0.00 32.98 3.84
316 317 4.708868 TGAATAGTTGAATACGCATCGC 57.291 40.909 0.00 0.00 0.00 4.58
317 318 3.493129 TGAATAGTTGAATACGCATCGCC 59.507 43.478 0.00 0.00 0.00 5.54
318 319 1.483316 TAGTTGAATACGCATCGCCG 58.517 50.000 0.00 0.00 0.00 6.46
319 320 1.151777 AGTTGAATACGCATCGCCGG 61.152 55.000 0.00 0.00 0.00 6.13
322 323 0.874175 TGAATACGCATCGCCGGAAG 60.874 55.000 5.05 0.00 0.00 3.46
324 325 0.874607 AATACGCATCGCCGGAAGAC 60.875 55.000 5.05 0.00 0.00 3.01
325 326 1.735376 ATACGCATCGCCGGAAGACT 61.735 55.000 5.05 0.00 0.00 3.24
326 327 1.940883 TACGCATCGCCGGAAGACTT 61.941 55.000 5.05 0.00 0.00 3.01
327 328 2.802667 CGCATCGCCGGAAGACTTG 61.803 63.158 5.05 0.82 0.00 3.16
328 329 1.447838 GCATCGCCGGAAGACTTGA 60.448 57.895 5.05 0.00 0.00 3.02
329 330 1.019278 GCATCGCCGGAAGACTTGAA 61.019 55.000 5.05 0.00 0.00 2.69
330 331 1.438651 CATCGCCGGAAGACTTGAAA 58.561 50.000 5.05 0.00 0.00 2.69
331 332 2.009774 CATCGCCGGAAGACTTGAAAT 58.990 47.619 5.05 0.00 0.00 2.17
332 333 3.194861 CATCGCCGGAAGACTTGAAATA 58.805 45.455 5.05 0.00 0.00 1.40
333 334 3.322211 TCGCCGGAAGACTTGAAATAA 57.678 42.857 5.05 0.00 0.00 1.40
334 335 3.666274 TCGCCGGAAGACTTGAAATAAA 58.334 40.909 5.05 0.00 0.00 1.40
335 336 4.258543 TCGCCGGAAGACTTGAAATAAAT 58.741 39.130 5.05 0.00 0.00 1.40
336 337 4.331717 TCGCCGGAAGACTTGAAATAAATC 59.668 41.667 5.05 0.00 0.00 2.17
337 338 4.495844 CGCCGGAAGACTTGAAATAAATCC 60.496 45.833 5.05 0.00 0.00 3.01
338 339 4.398044 GCCGGAAGACTTGAAATAAATCCA 59.602 41.667 5.05 0.00 0.00 3.41
339 340 5.449177 GCCGGAAGACTTGAAATAAATCCAG 60.449 44.000 5.05 0.00 0.00 3.86
340 341 5.880332 CCGGAAGACTTGAAATAAATCCAGA 59.120 40.000 0.00 0.00 0.00 3.86
341 342 6.374333 CCGGAAGACTTGAAATAAATCCAGAA 59.626 38.462 0.00 0.00 0.00 3.02
342 343 7.094377 CCGGAAGACTTGAAATAAATCCAGAAA 60.094 37.037 0.00 0.00 0.00 2.52
343 344 8.296713 CGGAAGACTTGAAATAAATCCAGAAAA 58.703 33.333 0.00 0.00 0.00 2.29
344 345 9.981114 GGAAGACTTGAAATAAATCCAGAAAAA 57.019 29.630 0.00 0.00 0.00 1.94
347 348 9.428097 AGACTTGAAATAAATCCAGAAAAATGC 57.572 29.630 0.00 0.00 0.00 3.56
348 349 8.243289 ACTTGAAATAAATCCAGAAAAATGCG 57.757 30.769 0.00 0.00 0.00 4.73
349 350 8.087750 ACTTGAAATAAATCCAGAAAAATGCGA 58.912 29.630 0.00 0.00 0.00 5.10
350 351 7.810766 TGAAATAAATCCAGAAAAATGCGAC 57.189 32.000 0.00 0.00 0.00 5.19
351 352 6.811170 TGAAATAAATCCAGAAAAATGCGACC 59.189 34.615 0.00 0.00 0.00 4.79
352 353 5.913137 ATAAATCCAGAAAAATGCGACCA 57.087 34.783 0.00 0.00 0.00 4.02
353 354 4.806640 AAATCCAGAAAAATGCGACCAT 57.193 36.364 0.00 0.00 0.00 3.55
354 355 4.376340 AATCCAGAAAAATGCGACCATC 57.624 40.909 0.00 0.00 0.00 3.51
355 356 2.789213 TCCAGAAAAATGCGACCATCA 58.211 42.857 0.00 0.00 0.00 3.07
356 357 2.749076 TCCAGAAAAATGCGACCATCAG 59.251 45.455 0.00 0.00 0.00 2.90
357 358 2.489329 CCAGAAAAATGCGACCATCAGT 59.511 45.455 0.00 0.00 0.00 3.41
358 359 3.495193 CAGAAAAATGCGACCATCAGTG 58.505 45.455 0.00 0.00 0.00 3.66
359 360 2.095059 AGAAAAATGCGACCATCAGTGC 60.095 45.455 0.00 0.00 0.00 4.40
360 361 0.527565 AAAATGCGACCATCAGTGCC 59.472 50.000 0.00 0.00 0.00 5.01
361 362 0.322816 AAATGCGACCATCAGTGCCT 60.323 50.000 0.00 0.00 0.00 4.75
362 363 0.541392 AATGCGACCATCAGTGCCTA 59.459 50.000 0.00 0.00 0.00 3.93
363 364 0.179073 ATGCGACCATCAGTGCCTAC 60.179 55.000 0.00 0.00 0.00 3.18
364 365 1.218047 GCGACCATCAGTGCCTACA 59.782 57.895 0.00 0.00 0.00 2.74
376 377 1.607148 GTGCCTACACCACAAGAAACC 59.393 52.381 0.00 0.00 41.21 3.27
377 378 1.493022 TGCCTACACCACAAGAAACCT 59.507 47.619 0.00 0.00 0.00 3.50
378 379 2.706723 TGCCTACACCACAAGAAACCTA 59.293 45.455 0.00 0.00 0.00 3.08
379 380 3.136809 TGCCTACACCACAAGAAACCTAA 59.863 43.478 0.00 0.00 0.00 2.69
380 381 3.501062 GCCTACACCACAAGAAACCTAAC 59.499 47.826 0.00 0.00 0.00 2.34
381 382 4.070009 CCTACACCACAAGAAACCTAACC 58.930 47.826 0.00 0.00 0.00 2.85
382 383 3.655615 ACACCACAAGAAACCTAACCA 57.344 42.857 0.00 0.00 0.00 3.67
383 384 4.178956 ACACCACAAGAAACCTAACCAT 57.821 40.909 0.00 0.00 0.00 3.55
384 385 4.542697 ACACCACAAGAAACCTAACCATT 58.457 39.130 0.00 0.00 0.00 3.16
385 386 5.697067 ACACCACAAGAAACCTAACCATTA 58.303 37.500 0.00 0.00 0.00 1.90
386 387 5.768164 ACACCACAAGAAACCTAACCATTAG 59.232 40.000 0.00 0.00 0.00 1.73
387 388 6.001460 CACCACAAGAAACCTAACCATTAGA 58.999 40.000 0.00 0.00 35.20 2.10
388 389 6.149474 CACCACAAGAAACCTAACCATTAGAG 59.851 42.308 0.00 0.00 35.20 2.43
389 390 6.183361 ACCACAAGAAACCTAACCATTAGAGT 60.183 38.462 0.00 0.00 35.20 3.24
390 391 6.715264 CCACAAGAAACCTAACCATTAGAGTT 59.285 38.462 0.00 0.00 35.20 3.01
391 392 7.881232 CCACAAGAAACCTAACCATTAGAGTTA 59.119 37.037 0.00 0.00 35.20 2.24
392 393 9.449719 CACAAGAAACCTAACCATTAGAGTTAT 57.550 33.333 0.00 0.00 35.20 1.89
393 394 9.449719 ACAAGAAACCTAACCATTAGAGTTATG 57.550 33.333 0.00 4.23 35.20 1.90
394 395 8.398665 CAAGAAACCTAACCATTAGAGTTATGC 58.601 37.037 0.00 0.00 35.20 3.14
395 396 7.630082 AGAAACCTAACCATTAGAGTTATGCA 58.370 34.615 0.00 0.00 35.20 3.96
396 397 7.553044 AGAAACCTAACCATTAGAGTTATGCAC 59.447 37.037 0.00 0.00 35.20 4.57
397 398 6.308015 ACCTAACCATTAGAGTTATGCACA 57.692 37.500 0.00 0.00 35.20 4.57
398 399 6.349300 ACCTAACCATTAGAGTTATGCACAG 58.651 40.000 0.00 0.00 35.20 3.66
399 400 6.070194 ACCTAACCATTAGAGTTATGCACAGT 60.070 38.462 0.00 0.00 35.20 3.55
400 401 6.823689 CCTAACCATTAGAGTTATGCACAGTT 59.176 38.462 0.00 0.00 35.20 3.16
401 402 6.743575 AACCATTAGAGTTATGCACAGTTC 57.256 37.500 0.00 0.00 0.00 3.01
402 403 4.870426 ACCATTAGAGTTATGCACAGTTCG 59.130 41.667 0.00 0.00 0.00 3.95
403 404 4.260375 CCATTAGAGTTATGCACAGTTCGC 60.260 45.833 0.00 0.00 0.00 4.70
404 405 2.455674 AGAGTTATGCACAGTTCGCA 57.544 45.000 0.00 0.00 44.94 5.10
414 415 6.183360 TTATGCACAGTTCGCATGTGAATAAT 60.183 34.615 23.58 11.01 46.85 1.28
415 416 8.149821 TTATGCACAGTTCGCATGTGAATAATG 61.150 37.037 23.58 21.97 46.85 1.90
418 419 6.925610 ACAGTTCGCATGTGAATAATGTAT 57.074 33.333 23.58 6.95 0.00 2.29
419 420 7.320443 ACAGTTCGCATGTGAATAATGTATT 57.680 32.000 23.58 6.36 0.00 1.89
420 421 7.761409 ACAGTTCGCATGTGAATAATGTATTT 58.239 30.769 23.58 6.06 0.00 1.40
421 422 7.910162 ACAGTTCGCATGTGAATAATGTATTTC 59.090 33.333 23.58 7.73 0.00 2.17
422 423 7.909641 CAGTTCGCATGTGAATAATGTATTTCA 59.090 33.333 23.58 0.00 0.00 2.69
423 424 8.458052 AGTTCGCATGTGAATAATGTATTTCAA 58.542 29.630 23.58 0.00 0.00 2.69
424 425 9.071221 GTTCGCATGTGAATAATGTATTTCAAA 57.929 29.630 23.58 0.00 0.00 2.69
425 426 9.631452 TTCGCATGTGAATAATGTATTTCAAAA 57.369 25.926 17.57 0.00 0.00 2.44
426 427 9.631452 TCGCATGTGAATAATGTATTTCAAAAA 57.369 25.926 6.47 0.00 0.00 1.94
459 460 9.639601 ACATGTATATGTTCTTGATGTATACGG 57.360 33.333 0.00 0.00 45.01 4.02
460 461 8.595533 CATGTATATGTTCTTGATGTATACGGC 58.404 37.037 0.00 0.00 33.21 5.68
461 462 7.662897 TGTATATGTTCTTGATGTATACGGCA 58.337 34.615 0.00 0.00 33.21 5.69
462 463 8.145122 TGTATATGTTCTTGATGTATACGGCAA 58.855 33.333 9.12 9.12 33.21 4.52
463 464 8.984764 GTATATGTTCTTGATGTATACGGCAAA 58.015 33.333 10.29 0.00 0.00 3.68
464 465 6.942532 ATGTTCTTGATGTATACGGCAAAT 57.057 33.333 10.29 1.24 0.00 2.32
465 466 6.117911 TGTTCTTGATGTATACGGCAAATG 57.882 37.500 10.29 2.65 0.00 2.32
466 467 5.645929 TGTTCTTGATGTATACGGCAAATGT 59.354 36.000 10.29 0.00 0.00 2.71
467 468 5.733226 TCTTGATGTATACGGCAAATGTG 57.267 39.130 10.29 1.85 0.00 3.21
468 469 5.182487 TCTTGATGTATACGGCAAATGTGT 58.818 37.500 10.29 0.00 0.00 3.72
469 470 4.873768 TGATGTATACGGCAAATGTGTG 57.126 40.909 0.00 0.00 0.00 3.82
470 471 4.508662 TGATGTATACGGCAAATGTGTGA 58.491 39.130 0.00 0.00 0.00 3.58
471 472 4.331443 TGATGTATACGGCAAATGTGTGAC 59.669 41.667 0.00 0.00 0.00 3.67
472 473 3.665190 TGTATACGGCAAATGTGTGACA 58.335 40.909 0.00 0.00 0.00 3.58
473 474 4.257731 TGTATACGGCAAATGTGTGACAT 58.742 39.130 0.00 0.00 41.31 3.06
474 475 3.763097 ATACGGCAAATGTGTGACATG 57.237 42.857 0.00 0.00 37.97 3.21
475 476 1.317613 ACGGCAAATGTGTGACATGT 58.682 45.000 0.00 0.00 37.97 3.21
476 477 2.499197 ACGGCAAATGTGTGACATGTA 58.501 42.857 0.00 0.00 37.97 2.29
477 478 3.081061 ACGGCAAATGTGTGACATGTAT 58.919 40.909 0.00 0.00 37.97 2.29
478 479 3.119884 ACGGCAAATGTGTGACATGTATG 60.120 43.478 0.00 0.00 37.97 2.39
479 480 3.126686 CGGCAAATGTGTGACATGTATGA 59.873 43.478 0.00 0.00 37.97 2.15
480 481 4.379290 CGGCAAATGTGTGACATGTATGAA 60.379 41.667 0.00 0.00 37.97 2.57
481 482 5.468592 GGCAAATGTGTGACATGTATGAAA 58.531 37.500 0.00 0.00 37.97 2.69
482 483 5.925397 GGCAAATGTGTGACATGTATGAAAA 59.075 36.000 0.00 0.00 37.97 2.29
483 484 6.423302 GGCAAATGTGTGACATGTATGAAAAA 59.577 34.615 0.00 0.00 37.97 1.94
484 485 7.118101 GGCAAATGTGTGACATGTATGAAAAAT 59.882 33.333 0.00 0.00 37.97 1.82
485 486 7.953173 GCAAATGTGTGACATGTATGAAAAATG 59.047 33.333 0.00 0.00 37.97 2.32
486 487 9.194271 CAAATGTGTGACATGTATGAAAAATGA 57.806 29.630 0.00 0.00 37.97 2.57
487 488 9.932207 AAATGTGTGACATGTATGAAAAATGAT 57.068 25.926 0.00 0.00 37.97 2.45
490 491 8.676401 TGTGTGACATGTATGAAAAATGATAGG 58.324 33.333 0.00 0.00 0.00 2.57
491 492 7.645340 GTGTGACATGTATGAAAAATGATAGGC 59.355 37.037 0.00 0.00 0.00 3.93
492 493 7.338957 TGTGACATGTATGAAAAATGATAGGCA 59.661 33.333 0.00 0.00 0.00 4.75
493 494 8.355169 GTGACATGTATGAAAAATGATAGGCAT 58.645 33.333 0.00 0.00 39.43 4.40
838 844 6.918626 TCTGATCCAAATTAATTGACGCAAA 58.081 32.000 0.39 0.00 41.85 3.68
844 882 8.459521 TCCAAATTAATTGACGCAAATTAGTG 57.540 30.769 0.39 0.00 41.85 2.74
847 885 8.382130 CAAATTAATTGACGCAAATTAGTGCAT 58.618 29.630 0.39 0.00 42.06 3.96
857 895 5.447846 CGCAAATTAGTGCATGTTTAGTACG 59.552 40.000 3.20 0.00 45.19 3.67
875 913 2.091541 ACGATGTTTTGTATGGGCCTG 58.908 47.619 4.53 0.00 0.00 4.85
878 916 3.181497 CGATGTTTTGTATGGGCCTGAAG 60.181 47.826 4.53 0.00 0.00 3.02
941 979 1.237285 CGCCTTCACTTTCCCCACTG 61.237 60.000 0.00 0.00 0.00 3.66
946 984 1.059584 TCACTTTCCCCACTGGCTCA 61.060 55.000 0.00 0.00 0.00 4.26
947 985 0.607489 CACTTTCCCCACTGGCTCAG 60.607 60.000 1.16 1.16 37.52 3.35
948 986 1.676967 CTTTCCCCACTGGCTCAGC 60.677 63.158 0.00 0.00 34.37 4.26
949 987 2.134630 CTTTCCCCACTGGCTCAGCT 62.135 60.000 0.00 0.00 34.37 4.24
950 988 2.416107 TTTCCCCACTGGCTCAGCTG 62.416 60.000 7.63 7.63 34.37 4.24
951 989 4.421515 CCCCACTGGCTCAGCTGG 62.422 72.222 15.13 5.82 34.37 4.85
952 990 3.644606 CCCACTGGCTCAGCTGGT 61.645 66.667 15.13 0.00 33.80 4.00
953 991 2.433446 CCACTGGCTCAGCTGGTT 59.567 61.111 15.13 0.00 34.37 3.67
954 992 1.970114 CCACTGGCTCAGCTGGTTG 60.970 63.158 15.13 5.91 34.37 3.77
955 993 1.071987 CACTGGCTCAGCTGGTTGA 59.928 57.895 15.13 0.00 34.37 3.18
956 994 1.072159 ACTGGCTCAGCTGGTTGAC 59.928 57.895 15.13 7.52 34.37 3.18
957 995 1.673665 CTGGCTCAGCTGGTTGACC 60.674 63.158 15.13 8.97 0.00 4.02
958 996 2.360475 GGCTCAGCTGGTTGACCC 60.360 66.667 15.13 1.87 34.29 4.46
959 997 2.431683 GCTCAGCTGGTTGACCCA 59.568 61.111 15.13 0.00 42.51 4.51
960 998 1.001641 GCTCAGCTGGTTGACCCAT 60.002 57.895 15.13 0.00 44.15 4.00
961 999 0.610232 GCTCAGCTGGTTGACCCATT 60.610 55.000 15.13 0.00 44.15 3.16
962 1000 1.915141 CTCAGCTGGTTGACCCATTT 58.085 50.000 15.13 0.00 44.15 2.32
963 1001 1.815003 CTCAGCTGGTTGACCCATTTC 59.185 52.381 15.13 0.00 44.15 2.17
964 1002 0.890683 CAGCTGGTTGACCCATTTCC 59.109 55.000 5.57 0.00 44.15 3.13
965 1003 0.251787 AGCTGGTTGACCCATTTCCC 60.252 55.000 0.00 0.00 44.15 3.97
966 1004 0.251787 GCTGGTTGACCCATTTCCCT 60.252 55.000 0.00 0.00 44.15 4.20
967 1005 1.839424 CTGGTTGACCCATTTCCCTC 58.161 55.000 0.00 0.00 44.15 4.30
968 1006 1.075374 CTGGTTGACCCATTTCCCTCA 59.925 52.381 0.00 0.00 44.15 3.86
969 1007 1.501170 TGGTTGACCCATTTCCCTCAA 59.499 47.619 0.00 0.00 38.72 3.02
970 1008 2.091055 TGGTTGACCCATTTCCCTCAAA 60.091 45.455 0.00 0.00 38.72 2.69
971 1009 2.969262 GGTTGACCCATTTCCCTCAAAA 59.031 45.455 0.00 0.00 0.00 2.44
972 1010 3.389656 GGTTGACCCATTTCCCTCAAAAA 59.610 43.478 0.00 0.00 0.00 1.94
1124 1162 0.108615 TTCCAGCAGACTAGCTTCGC 60.109 55.000 0.00 0.00 43.70 4.70
1259 1331 0.944386 AGCAAGCAAACTGTACACGG 59.056 50.000 0.00 0.00 0.00 4.94
1260 1332 0.660300 GCAAGCAAACTGTACACGGC 60.660 55.000 0.00 0.00 0.00 5.68
1291 1363 0.457851 AGTCGTGTAGCAGCAGATCC 59.542 55.000 0.00 0.00 0.00 3.36
1320 1392 3.365364 GGAAGCTGCACTGAATGTAACAC 60.365 47.826 1.02 0.00 0.00 3.32
1365 1437 1.679680 TCAGATGATTCGGTCGTACCC 59.320 52.381 0.00 0.00 33.75 3.69
1377 1449 3.518590 GGTCGTACCCAGTAGTTCAATG 58.481 50.000 0.00 0.00 30.04 2.82
1381 1453 5.519206 GTCGTACCCAGTAGTTCAATGATTC 59.481 44.000 0.00 0.00 0.00 2.52
1383 1455 4.819105 ACCCAGTAGTTCAATGATTCGA 57.181 40.909 0.00 0.00 0.00 3.71
1384 1456 4.759782 ACCCAGTAGTTCAATGATTCGAG 58.240 43.478 0.00 0.00 0.00 4.04
1451 1552 2.173519 CCATCACCACTTTTCCAGCAT 58.826 47.619 0.00 0.00 0.00 3.79
1481 1709 6.553524 ACTGAATTACTAGTTGCGTCTACTC 58.446 40.000 0.00 0.00 0.00 2.59
1482 1710 6.150641 ACTGAATTACTAGTTGCGTCTACTCA 59.849 38.462 0.00 0.00 0.00 3.41
1485 1713 7.335171 TGAATTACTAGTTGCGTCTACTCACTA 59.665 37.037 0.00 0.00 0.00 2.74
1510 1739 5.156804 AGCTAACTGACGAAACAAAACTG 57.843 39.130 0.00 0.00 0.00 3.16
1590 1819 4.051922 GTGATAAGCGTCATCTCCGAAAT 58.948 43.478 0.00 0.00 0.00 2.17
1644 1873 3.477530 AGCAAGGACGCTAAACTTTTCT 58.522 40.909 0.00 0.00 41.55 2.52
1707 1936 0.390860 GATCGGCATAGAGGTGTGCT 59.609 55.000 0.00 0.00 40.53 4.40
1733 1962 0.836606 TTGCTCTCCAAGGTGTGACA 59.163 50.000 0.00 0.00 0.00 3.58
1778 2007 1.197949 GAGAAAGGAAAAGCTGCGGTC 59.802 52.381 0.00 0.00 0.00 4.79
1850 2079 3.444034 TCGATATACTGGATGCTGGTAGC 59.556 47.826 0.00 0.00 42.82 3.58
1857 2086 3.680620 GATGCTGGTAGCCGTGCCA 62.681 63.158 0.00 0.00 41.51 4.92
1865 2094 0.742990 GTAGCCGTGCCACATTAGCA 60.743 55.000 0.00 0.00 38.08 3.49
1937 2170 6.861065 TTGTTTCTTCTTCTGTAGCGAATT 57.139 33.333 0.00 0.00 0.00 2.17
2162 2396 3.251484 TGAGAAAGGGGAATCAGACAGT 58.749 45.455 0.00 0.00 0.00 3.55
2164 2398 4.467795 TGAGAAAGGGGAATCAGACAGTAG 59.532 45.833 0.00 0.00 0.00 2.57
2165 2399 4.430441 AGAAAGGGGAATCAGACAGTAGT 58.570 43.478 0.00 0.00 0.00 2.73
2170 2404 5.721225 AGGGGAATCAGACAGTAGTATCAT 58.279 41.667 0.00 0.00 0.00 2.45
2171 2405 6.146760 AGGGGAATCAGACAGTAGTATCATT 58.853 40.000 0.00 0.00 0.00 2.57
2295 2529 5.806654 ACTTGTGCTTCAACCCAAATATT 57.193 34.783 0.00 0.00 32.18 1.28
2297 2531 5.304101 ACTTGTGCTTCAACCCAAATATTGA 59.696 36.000 0.00 0.00 33.03 2.57
2371 2608 7.622713 ACATGGGAAAATGAAATGCTGATTTA 58.377 30.769 0.00 0.00 31.58 1.40
2427 2664 3.531538 TGAATGTTCGCTAGAATGGACC 58.468 45.455 0.00 0.00 38.80 4.46
2636 2995 9.545105 AAAGCACATTGAATTTGAAGTGAATTA 57.455 25.926 0.00 0.00 0.00 1.40
2662 3021 7.546778 TTGATTGATACGCTACAAAATAGCA 57.453 32.000 6.73 0.00 40.39 3.49
2789 3150 6.009908 TGTATGCCTCCTAGAACTGTAGTA 57.990 41.667 0.00 0.00 0.00 1.82
2845 3206 5.499139 TCACGGGAGATTTTGAATTATGC 57.501 39.130 0.00 0.00 0.00 3.14
2846 3207 4.946772 TCACGGGAGATTTTGAATTATGCA 59.053 37.500 0.00 0.00 0.00 3.96
2938 3299 6.035220 TCGAATCGGTGATTGTACAAACATAC 59.965 38.462 19.84 14.91 34.97 2.39
2941 3302 5.412640 TCGGTGATTGTACAAACATACGAT 58.587 37.500 27.92 8.57 33.86 3.73
2959 3320 5.339008 ACGATGAGGCAGTAAAATGTCTA 57.661 39.130 0.00 0.00 34.61 2.59
3095 3456 3.244976 GTTTATCGCTTGCTGCAACAAT 58.755 40.909 11.69 7.67 43.06 2.71
3105 3466 5.356882 TTGCTGCAACAATAACTGTAGTC 57.643 39.130 11.69 0.00 37.23 2.59
3134 3495 5.133941 TGTAAATGGCAACTTTAGTCACCA 58.866 37.500 0.00 6.36 37.34 4.17
3587 3948 2.763448 TGCCACTTTGTTTAGGTTTGCT 59.237 40.909 0.00 0.00 0.00 3.91
3779 4140 6.999950 TCTTACAACCAGTCTATTGCTGTTA 58.000 36.000 0.00 0.00 32.41 2.41
3780 4141 7.620880 TCTTACAACCAGTCTATTGCTGTTAT 58.379 34.615 0.00 0.00 32.41 1.89
3781 4142 7.764443 TCTTACAACCAGTCTATTGCTGTTATC 59.236 37.037 0.00 0.00 32.41 1.75
3782 4143 6.054860 ACAACCAGTCTATTGCTGTTATCT 57.945 37.500 0.00 0.00 32.41 1.98
3783 4144 5.877012 ACAACCAGTCTATTGCTGTTATCTG 59.123 40.000 0.00 0.00 32.41 2.90
3784 4145 5.939764 ACCAGTCTATTGCTGTTATCTGA 57.060 39.130 0.00 0.00 32.41 3.27
3785 4146 5.665459 ACCAGTCTATTGCTGTTATCTGAC 58.335 41.667 0.00 0.00 32.41 3.51
3860 4222 1.837439 AGCGAGTTGTGATCCCCATTA 59.163 47.619 0.00 0.00 0.00 1.90
3861 4223 2.439507 AGCGAGTTGTGATCCCCATTAT 59.560 45.455 0.00 0.00 0.00 1.28
3981 4344 5.199723 TGGTTATATGAAAATCCTGCTGCA 58.800 37.500 0.88 0.88 0.00 4.41
4087 4462 4.717233 ATTTGAGTTGTTGTTGTGCTCA 57.283 36.364 0.00 0.00 34.80 4.26
4160 4535 4.143221 GCTGTTGCTTTTCGTCAAACAAAA 60.143 37.500 0.00 0.00 36.03 2.44
4209 4587 2.676176 CGATGATGCTGTTGAGTGACCT 60.676 50.000 0.00 0.00 0.00 3.85
4219 4597 0.394192 TGAGTGACCTCAGTGCAAGG 59.606 55.000 1.15 1.15 42.80 3.61
4223 4601 2.743718 ACCTCAGTGCAAGGTCCG 59.256 61.111 2.54 0.00 43.85 4.79
4224 4602 1.837051 ACCTCAGTGCAAGGTCCGA 60.837 57.895 2.54 0.00 43.85 4.55
4225 4603 1.194781 ACCTCAGTGCAAGGTCCGAT 61.195 55.000 2.54 0.00 43.85 4.18
4250 4628 6.311445 TCGAATCACAACTTATCTTTCTCAGC 59.689 38.462 0.00 0.00 0.00 4.26
4271 4649 4.082190 AGCGTTTCTCTTCTGTACATGCTA 60.082 41.667 0.00 0.00 0.00 3.49
4281 4659 1.338674 TGTACATGCTACCACAGGTGC 60.339 52.381 0.00 1.74 37.44 5.01
4282 4660 0.980423 TACATGCTACCACAGGTGCA 59.020 50.000 13.04 13.04 41.25 4.57
4319 4699 0.609662 GCAAAGGTGATGGCAATGGT 59.390 50.000 0.00 0.00 0.00 3.55
4331 4711 1.032014 GCAATGGTGGTATTGGCGAT 58.968 50.000 0.00 0.00 38.25 4.58
4357 4737 2.832129 TCTAAGAAGCAGAATCCGGTGT 59.168 45.455 0.00 0.00 0.00 4.16
4359 4739 0.108615 AGAAGCAGAATCCGGTGTCG 60.109 55.000 0.00 0.00 0.00 4.35
4364 4744 0.038618 CAGAATCCGGTGTCGTGTCA 60.039 55.000 0.00 0.00 33.95 3.58
4386 4766 1.765230 TACCCTCTCGAGCTTCTTCC 58.235 55.000 7.81 0.00 0.00 3.46
4400 4780 1.047801 TCTTCCCCAAAGCAAAAGGC 58.952 50.000 0.00 0.00 45.30 4.35
4411 4791 1.775869 GCAAAAGGCACAGCTTTCTC 58.224 50.000 0.00 0.00 43.97 2.87
4430 4810 1.281925 CCCCCAGCACTAGGAATGGT 61.282 60.000 8.14 0.00 0.00 3.55
4437 4817 0.527817 CACTAGGAATGGTCGTCGCC 60.528 60.000 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 9.575783 ACGTTTGTACTGTGTTCAAAAATAAAT 57.424 25.926 4.55 0.00 35.35 1.40
44 45 8.967552 ACGTTTGTACTGTGTTCAAAAATAAA 57.032 26.923 4.55 0.00 35.35 1.40
45 46 9.705471 CTACGTTTGTACTGTGTTCAAAAATAA 57.295 29.630 0.00 0.00 35.35 1.40
47 48 7.976826 TCTACGTTTGTACTGTGTTCAAAAAT 58.023 30.769 0.00 0.53 35.35 1.82
48 49 7.361889 TCTACGTTTGTACTGTGTTCAAAAA 57.638 32.000 0.00 0.00 35.35 1.94
49 50 6.964741 TCTACGTTTGTACTGTGTTCAAAA 57.035 33.333 0.00 0.00 35.35 2.44
53 54 7.060403 GTGAGTATCTACGTTTGTACTGTGTTC 59.940 40.741 10.05 0.00 34.92 3.18
54 55 6.860023 GTGAGTATCTACGTTTGTACTGTGTT 59.140 38.462 10.05 0.00 34.92 3.32
55 56 6.016860 TGTGAGTATCTACGTTTGTACTGTGT 60.017 38.462 10.05 0.00 34.92 3.72
56 57 6.304922 GTGTGAGTATCTACGTTTGTACTGTG 59.695 42.308 10.05 0.00 34.92 3.66
57 58 6.016860 TGTGTGAGTATCTACGTTTGTACTGT 60.017 38.462 10.05 0.00 34.92 3.55
59 60 6.016860 TGTGTGTGAGTATCTACGTTTGTACT 60.017 38.462 0.00 0.00 34.92 2.73
60 61 6.087291 GTGTGTGTGAGTATCTACGTTTGTAC 59.913 42.308 0.00 0.00 34.92 2.90
61 62 6.144854 GTGTGTGTGAGTATCTACGTTTGTA 58.855 40.000 0.00 0.00 34.92 2.41
63 64 4.979815 TGTGTGTGTGAGTATCTACGTTTG 59.020 41.667 0.00 0.00 34.92 2.93
64 65 5.190992 TGTGTGTGTGAGTATCTACGTTT 57.809 39.130 0.00 0.00 34.92 3.60
65 66 4.841443 TGTGTGTGTGAGTATCTACGTT 57.159 40.909 0.00 0.00 34.92 3.99
66 67 6.694877 ATATGTGTGTGTGAGTATCTACGT 57.305 37.500 0.00 0.00 34.92 3.57
67 68 9.756461 GTATATATGTGTGTGTGAGTATCTACG 57.244 37.037 0.00 0.00 34.92 3.51
70 71 9.355916 AGTGTATATATGTGTGTGTGAGTATCT 57.644 33.333 0.00 0.00 34.92 1.98
71 72 9.613957 GAGTGTATATATGTGTGTGTGAGTATC 57.386 37.037 0.00 0.00 0.00 2.24
72 73 9.131791 TGAGTGTATATATGTGTGTGTGAGTAT 57.868 33.333 0.00 0.00 0.00 2.12
73 74 8.514330 TGAGTGTATATATGTGTGTGTGAGTA 57.486 34.615 0.00 0.00 0.00 2.59
74 75 7.404671 TGAGTGTATATATGTGTGTGTGAGT 57.595 36.000 0.00 0.00 0.00 3.41
75 76 7.222805 GGTTGAGTGTATATATGTGTGTGTGAG 59.777 40.741 0.00 0.00 0.00 3.51
76 77 7.039270 GGTTGAGTGTATATATGTGTGTGTGA 58.961 38.462 0.00 0.00 0.00 3.58
77 78 6.257849 GGGTTGAGTGTATATATGTGTGTGTG 59.742 42.308 0.00 0.00 0.00 3.82
78 79 6.156256 AGGGTTGAGTGTATATATGTGTGTGT 59.844 38.462 0.00 0.00 0.00 3.72
79 80 6.582636 AGGGTTGAGTGTATATATGTGTGTG 58.417 40.000 0.00 0.00 0.00 3.82
80 81 6.808321 AGGGTTGAGTGTATATATGTGTGT 57.192 37.500 0.00 0.00 0.00 3.72
81 82 8.585018 TCATAGGGTTGAGTGTATATATGTGTG 58.415 37.037 0.00 0.00 0.00 3.82
82 83 8.721133 TCATAGGGTTGAGTGTATATATGTGT 57.279 34.615 0.00 0.00 0.00 3.72
84 85 9.154632 TGTTCATAGGGTTGAGTGTATATATGT 57.845 33.333 0.00 0.00 0.00 2.29
87 88 8.541899 TGTGTTCATAGGGTTGAGTGTATATA 57.458 34.615 0.00 0.00 0.00 0.86
88 89 7.432148 TGTGTTCATAGGGTTGAGTGTATAT 57.568 36.000 0.00 0.00 0.00 0.86
89 90 6.860790 TGTGTTCATAGGGTTGAGTGTATA 57.139 37.500 0.00 0.00 0.00 1.47
90 91 5.755409 TGTGTTCATAGGGTTGAGTGTAT 57.245 39.130 0.00 0.00 0.00 2.29
91 92 5.554437 TTGTGTTCATAGGGTTGAGTGTA 57.446 39.130 0.00 0.00 0.00 2.90
92 93 4.431416 TTGTGTTCATAGGGTTGAGTGT 57.569 40.909 0.00 0.00 0.00 3.55
95 96 4.319477 CGTGTTTGTGTTCATAGGGTTGAG 60.319 45.833 0.00 0.00 0.00 3.02
96 97 3.562141 CGTGTTTGTGTTCATAGGGTTGA 59.438 43.478 0.00 0.00 0.00 3.18
97 98 3.851838 GCGTGTTTGTGTTCATAGGGTTG 60.852 47.826 0.00 0.00 0.00 3.77
98 99 2.292292 GCGTGTTTGTGTTCATAGGGTT 59.708 45.455 0.00 0.00 0.00 4.11
99 100 1.877443 GCGTGTTTGTGTTCATAGGGT 59.123 47.619 0.00 0.00 0.00 4.34
100 101 1.876799 TGCGTGTTTGTGTTCATAGGG 59.123 47.619 0.00 0.00 0.00 3.53
101 102 2.350388 GGTGCGTGTTTGTGTTCATAGG 60.350 50.000 0.00 0.00 0.00 2.57
102 103 2.350388 GGGTGCGTGTTTGTGTTCATAG 60.350 50.000 0.00 0.00 0.00 2.23
103 104 1.604755 GGGTGCGTGTTTGTGTTCATA 59.395 47.619 0.00 0.00 0.00 2.15
104 105 0.383949 GGGTGCGTGTTTGTGTTCAT 59.616 50.000 0.00 0.00 0.00 2.57
105 106 0.678366 AGGGTGCGTGTTTGTGTTCA 60.678 50.000 0.00 0.00 0.00 3.18
106 107 1.301423 TAGGGTGCGTGTTTGTGTTC 58.699 50.000 0.00 0.00 0.00 3.18
108 109 1.606668 CATTAGGGTGCGTGTTTGTGT 59.393 47.619 0.00 0.00 0.00 3.72
110 111 1.975660 ACATTAGGGTGCGTGTTTGT 58.024 45.000 0.00 0.00 0.00 2.83
111 112 4.695217 AATACATTAGGGTGCGTGTTTG 57.305 40.909 0.00 0.00 0.00 2.93
112 113 7.399245 AATAAATACATTAGGGTGCGTGTTT 57.601 32.000 0.00 0.00 0.00 2.83
114 115 8.685838 ATAAATAAATACATTAGGGTGCGTGT 57.314 30.769 0.00 0.00 0.00 4.49
115 116 9.959749 AAATAAATAAATACATTAGGGTGCGTG 57.040 29.630 0.00 0.00 0.00 5.34
135 136 9.279904 CTTCGTTTGTACTGTGTTCAAAATAAA 57.720 29.630 4.55 1.00 35.35 1.40
136 137 8.666573 TCTTCGTTTGTACTGTGTTCAAAATAA 58.333 29.630 4.55 2.77 35.35 1.40
137 138 8.199176 TCTTCGTTTGTACTGTGTTCAAAATA 57.801 30.769 4.55 0.00 35.35 1.40
138 139 7.079182 TCTTCGTTTGTACTGTGTTCAAAAT 57.921 32.000 4.55 0.00 35.35 1.82
139 140 6.483385 TCTTCGTTTGTACTGTGTTCAAAA 57.517 33.333 4.55 0.00 35.35 2.44
140 141 6.482835 CATCTTCGTTTGTACTGTGTTCAAA 58.517 36.000 0.00 0.00 32.18 2.69
141 142 5.503357 GCATCTTCGTTTGTACTGTGTTCAA 60.503 40.000 0.00 0.00 0.00 2.69
144 145 4.127171 AGCATCTTCGTTTGTACTGTGTT 58.873 39.130 0.00 0.00 0.00 3.32
145 146 3.728845 AGCATCTTCGTTTGTACTGTGT 58.271 40.909 0.00 0.00 0.00 3.72
146 147 3.740832 TGAGCATCTTCGTTTGTACTGTG 59.259 43.478 0.00 0.00 34.92 3.66
147 148 3.741344 GTGAGCATCTTCGTTTGTACTGT 59.259 43.478 0.00 0.00 34.92 3.55
148 149 3.740832 TGTGAGCATCTTCGTTTGTACTG 59.259 43.478 0.00 0.00 34.92 2.74
151 152 3.493129 GTGTGTGAGCATCTTCGTTTGTA 59.507 43.478 0.00 0.00 34.92 2.41
152 153 2.287915 GTGTGTGAGCATCTTCGTTTGT 59.712 45.455 0.00 0.00 34.92 2.83
154 155 2.287915 GTGTGTGTGAGCATCTTCGTTT 59.712 45.455 0.00 0.00 34.92 3.60
155 156 1.867233 GTGTGTGTGAGCATCTTCGTT 59.133 47.619 0.00 0.00 34.92 3.85
156 157 1.202521 TGTGTGTGTGAGCATCTTCGT 60.203 47.619 0.00 0.00 34.92 3.85
157 158 1.193203 GTGTGTGTGTGAGCATCTTCG 59.807 52.381 0.00 0.00 34.92 3.79
158 159 2.032549 GTGTGTGTGTGTGAGCATCTTC 60.033 50.000 0.00 0.00 34.92 2.87
159 160 1.942657 GTGTGTGTGTGTGAGCATCTT 59.057 47.619 0.00 0.00 34.92 2.40
160 161 1.134431 TGTGTGTGTGTGTGAGCATCT 60.134 47.619 0.00 0.00 34.92 2.90
161 162 1.003545 GTGTGTGTGTGTGTGAGCATC 60.004 52.381 0.00 0.00 0.00 3.91
162 163 1.016627 GTGTGTGTGTGTGTGAGCAT 58.983 50.000 0.00 0.00 0.00 3.79
163 164 1.357991 CGTGTGTGTGTGTGTGAGCA 61.358 55.000 0.00 0.00 0.00 4.26
164 165 1.348250 CGTGTGTGTGTGTGTGAGC 59.652 57.895 0.00 0.00 0.00 4.26
165 166 1.348250 GCGTGTGTGTGTGTGTGAG 59.652 57.895 0.00 0.00 0.00 3.51
166 167 0.742635 ATGCGTGTGTGTGTGTGTGA 60.743 50.000 0.00 0.00 0.00 3.58
168 169 1.877637 ATATGCGTGTGTGTGTGTGT 58.122 45.000 0.00 0.00 0.00 3.72
169 170 2.734079 TGTATATGCGTGTGTGTGTGTG 59.266 45.455 0.00 0.00 0.00 3.82
170 171 2.734606 GTGTATATGCGTGTGTGTGTGT 59.265 45.455 0.00 0.00 0.00 3.72
172 173 3.250744 GAGTGTATATGCGTGTGTGTGT 58.749 45.455 0.00 0.00 0.00 3.72
173 174 3.249917 TGAGTGTATATGCGTGTGTGTG 58.750 45.455 0.00 0.00 0.00 3.82
174 175 3.586100 TGAGTGTATATGCGTGTGTGT 57.414 42.857 0.00 0.00 0.00 3.72
176 177 4.119862 GGATTGAGTGTATATGCGTGTGT 58.880 43.478 0.00 0.00 0.00 3.72
177 178 4.371786 AGGATTGAGTGTATATGCGTGTG 58.628 43.478 0.00 0.00 0.00 3.82
179 180 7.009631 GCTATAAGGATTGAGTGTATATGCGTG 59.990 40.741 0.00 0.00 0.00 5.34
180 181 7.036220 GCTATAAGGATTGAGTGTATATGCGT 58.964 38.462 0.00 0.00 0.00 5.24
182 183 7.278868 GGTGCTATAAGGATTGAGTGTATATGC 59.721 40.741 0.00 0.00 0.00 3.14
185 186 7.950684 AGAGGTGCTATAAGGATTGAGTGTATA 59.049 37.037 0.00 0.00 0.00 1.47
186 187 6.784969 AGAGGTGCTATAAGGATTGAGTGTAT 59.215 38.462 0.00 0.00 0.00 2.29
187 188 6.040955 CAGAGGTGCTATAAGGATTGAGTGTA 59.959 42.308 0.00 0.00 0.00 2.90
188 189 4.965532 AGAGGTGCTATAAGGATTGAGTGT 59.034 41.667 0.00 0.00 0.00 3.55
190 191 5.211973 TCAGAGGTGCTATAAGGATTGAGT 58.788 41.667 0.00 0.00 0.00 3.41
191 192 5.538053 TCTCAGAGGTGCTATAAGGATTGAG 59.462 44.000 0.00 0.00 0.00 3.02
192 193 5.458595 TCTCAGAGGTGCTATAAGGATTGA 58.541 41.667 0.00 0.00 0.00 2.57
193 194 5.798125 TCTCAGAGGTGCTATAAGGATTG 57.202 43.478 0.00 0.00 0.00 2.67
194 195 7.178274 CAGTATCTCAGAGGTGCTATAAGGATT 59.822 40.741 0.21 0.00 0.00 3.01
195 196 6.663093 CAGTATCTCAGAGGTGCTATAAGGAT 59.337 42.308 0.21 0.00 0.00 3.24
196 197 6.007076 CAGTATCTCAGAGGTGCTATAAGGA 58.993 44.000 0.21 0.00 0.00 3.36
198 199 6.349280 GCTCAGTATCTCAGAGGTGCTATAAG 60.349 46.154 0.21 1.57 31.57 1.73
199 200 5.475220 GCTCAGTATCTCAGAGGTGCTATAA 59.525 44.000 0.21 0.00 31.57 0.98
200 201 5.007034 GCTCAGTATCTCAGAGGTGCTATA 58.993 45.833 0.21 0.00 31.57 1.31
202 203 3.218453 GCTCAGTATCTCAGAGGTGCTA 58.782 50.000 0.21 0.00 31.57 3.49
203 204 2.031120 GCTCAGTATCTCAGAGGTGCT 58.969 52.381 0.00 0.00 31.57 4.40
205 206 1.336440 CGGCTCAGTATCTCAGAGGTG 59.664 57.143 0.00 0.00 31.57 4.00
206 207 1.686355 CGGCTCAGTATCTCAGAGGT 58.314 55.000 0.00 0.00 31.57 3.85
208 209 0.313672 GCCGGCTCAGTATCTCAGAG 59.686 60.000 22.15 0.00 33.62 3.35
209 210 0.395724 TGCCGGCTCAGTATCTCAGA 60.396 55.000 29.70 0.00 0.00 3.27
210 211 0.249238 GTGCCGGCTCAGTATCTCAG 60.249 60.000 29.70 0.00 0.00 3.35
211 212 0.970427 TGTGCCGGCTCAGTATCTCA 60.970 55.000 29.70 9.48 0.00 3.27
212 213 0.175760 TTGTGCCGGCTCAGTATCTC 59.824 55.000 28.12 8.34 0.00 2.75
213 214 0.833287 ATTGTGCCGGCTCAGTATCT 59.167 50.000 28.12 11.42 0.00 1.98
215 216 2.634940 AGATATTGTGCCGGCTCAGTAT 59.365 45.455 33.40 33.40 0.00 2.12
217 218 0.833287 AGATATTGTGCCGGCTCAGT 59.167 50.000 28.12 27.22 0.00 3.41
218 219 1.600957 CAAGATATTGTGCCGGCTCAG 59.399 52.381 28.12 13.32 0.00 3.35
220 221 1.869767 CTCAAGATATTGTGCCGGCTC 59.130 52.381 29.70 25.38 0.00 4.70
221 222 1.486310 TCTCAAGATATTGTGCCGGCT 59.514 47.619 29.70 9.99 0.00 5.52
222 223 1.599542 GTCTCAAGATATTGTGCCGGC 59.400 52.381 22.73 22.73 0.00 6.13
223 224 2.868583 CAGTCTCAAGATATTGTGCCGG 59.131 50.000 0.00 0.00 0.00 6.13
224 225 3.553511 GTCAGTCTCAAGATATTGTGCCG 59.446 47.826 0.00 0.00 0.00 5.69
225 226 3.553511 CGTCAGTCTCAAGATATTGTGCC 59.446 47.826 0.00 0.00 0.00 5.01
227 228 6.096036 ACTTCGTCAGTCTCAAGATATTGTG 58.904 40.000 0.00 0.00 0.00 3.33
228 229 6.274157 ACTTCGTCAGTCTCAAGATATTGT 57.726 37.500 0.00 0.00 0.00 2.71
244 245 0.388649 ATGTCTGTGGCGACTTCGTC 60.389 55.000 0.00 0.00 45.40 4.20
245 246 0.388649 GATGTCTGTGGCGACTTCGT 60.389 55.000 0.00 0.00 42.22 3.85
246 247 0.109086 AGATGTCTGTGGCGACTTCG 60.109 55.000 0.00 0.00 40.80 3.79
247 248 1.996191 GAAGATGTCTGTGGCGACTTC 59.004 52.381 0.00 0.00 37.98 3.01
249 250 0.109086 CGAAGATGTCTGTGGCGACT 60.109 55.000 0.00 0.00 35.00 4.18
250 251 0.388649 ACGAAGATGTCTGTGGCGAC 60.389 55.000 0.00 0.00 34.52 5.19
251 252 1.132453 CTACGAAGATGTCTGTGGCGA 59.868 52.381 0.00 0.00 0.00 5.54
252 253 1.135373 ACTACGAAGATGTCTGTGGCG 60.135 52.381 0.00 0.00 0.00 5.69
254 255 2.418976 TCGACTACGAAGATGTCTGTGG 59.581 50.000 0.00 0.00 45.74 4.17
255 256 3.741805 TCGACTACGAAGATGTCTGTG 57.258 47.619 0.00 0.00 45.74 3.66
278 279 8.499162 CAACTATTCATTGAGAAAAGACGTTCT 58.501 33.333 0.00 0.00 40.22 3.01
279 280 8.495949 TCAACTATTCATTGAGAAAAGACGTTC 58.504 33.333 0.00 0.00 40.22 3.95
280 281 8.378172 TCAACTATTCATTGAGAAAAGACGTT 57.622 30.769 0.00 0.00 40.22 3.99
281 282 7.962964 TCAACTATTCATTGAGAAAAGACGT 57.037 32.000 0.00 0.00 40.22 4.34
286 287 8.726068 TGCGTATTCAACTATTCATTGAGAAAA 58.274 29.630 0.00 0.00 40.22 2.29
287 288 8.262715 TGCGTATTCAACTATTCATTGAGAAA 57.737 30.769 0.00 0.00 40.22 2.52
288 289 7.841915 TGCGTATTCAACTATTCATTGAGAA 57.158 32.000 0.00 0.00 37.38 2.87
289 290 7.096065 CGATGCGTATTCAACTATTCATTGAGA 60.096 37.037 0.00 0.00 37.38 3.27
290 291 7.005958 CGATGCGTATTCAACTATTCATTGAG 58.994 38.462 0.00 0.00 37.38 3.02
291 292 6.563939 GCGATGCGTATTCAACTATTCATTGA 60.564 38.462 0.00 0.00 34.27 2.57
292 293 5.561499 GCGATGCGTATTCAACTATTCATTG 59.439 40.000 0.00 0.00 0.00 2.82
293 294 5.334105 GGCGATGCGTATTCAACTATTCATT 60.334 40.000 0.00 0.00 0.00 2.57
294 295 4.152402 GGCGATGCGTATTCAACTATTCAT 59.848 41.667 0.00 0.00 0.00 2.57
295 296 3.493129 GGCGATGCGTATTCAACTATTCA 59.507 43.478 0.00 0.00 0.00 2.57
297 298 2.475111 CGGCGATGCGTATTCAACTATT 59.525 45.455 0.00 0.00 0.00 1.73
298 299 2.058798 CGGCGATGCGTATTCAACTAT 58.941 47.619 0.00 0.00 0.00 2.12
300 301 1.151777 CCGGCGATGCGTATTCAACT 61.152 55.000 9.30 0.00 0.00 3.16
301 302 1.149361 TCCGGCGATGCGTATTCAAC 61.149 55.000 9.30 0.00 0.00 3.18
302 303 0.460459 TTCCGGCGATGCGTATTCAA 60.460 50.000 9.30 0.00 0.00 2.69
303 304 0.874175 CTTCCGGCGATGCGTATTCA 60.874 55.000 9.30 0.00 0.00 2.57
304 305 0.596600 TCTTCCGGCGATGCGTATTC 60.597 55.000 9.30 0.00 0.00 1.75
305 306 0.874607 GTCTTCCGGCGATGCGTATT 60.875 55.000 9.30 0.00 0.00 1.89
306 307 1.299926 GTCTTCCGGCGATGCGTAT 60.300 57.895 9.30 0.00 0.00 3.06
307 308 1.940883 AAGTCTTCCGGCGATGCGTA 61.941 55.000 9.30 0.00 0.00 4.42
308 309 3.296709 AAGTCTTCCGGCGATGCGT 62.297 57.895 9.30 0.00 0.00 5.24
309 310 2.509336 AAGTCTTCCGGCGATGCG 60.509 61.111 9.30 0.00 0.00 4.73
310 311 1.019278 TTCAAGTCTTCCGGCGATGC 61.019 55.000 9.30 0.00 0.00 3.91
311 312 1.438651 TTTCAAGTCTTCCGGCGATG 58.561 50.000 9.30 0.00 0.00 3.84
312 313 2.403252 ATTTCAAGTCTTCCGGCGAT 57.597 45.000 9.30 0.00 0.00 4.58
313 314 3.322211 TTATTTCAAGTCTTCCGGCGA 57.678 42.857 9.30 0.00 0.00 5.54
314 315 4.495844 GGATTTATTTCAAGTCTTCCGGCG 60.496 45.833 0.00 0.00 0.00 6.46
315 316 4.398044 TGGATTTATTTCAAGTCTTCCGGC 59.602 41.667 0.00 0.00 0.00 6.13
316 317 5.880332 TCTGGATTTATTTCAAGTCTTCCGG 59.120 40.000 0.00 0.00 0.00 5.14
317 318 6.985188 TCTGGATTTATTTCAAGTCTTCCG 57.015 37.500 0.00 0.00 0.00 4.30
318 319 9.981114 TTTTTCTGGATTTATTTCAAGTCTTCC 57.019 29.630 0.00 0.00 0.00 3.46
322 323 8.375465 CGCATTTTTCTGGATTTATTTCAAGTC 58.625 33.333 0.00 0.00 0.00 3.01
324 325 8.375465 GTCGCATTTTTCTGGATTTATTTCAAG 58.625 33.333 0.00 0.00 0.00 3.02
325 326 7.330700 GGTCGCATTTTTCTGGATTTATTTCAA 59.669 33.333 0.00 0.00 0.00 2.69
326 327 6.811170 GGTCGCATTTTTCTGGATTTATTTCA 59.189 34.615 0.00 0.00 0.00 2.69
327 328 6.811170 TGGTCGCATTTTTCTGGATTTATTTC 59.189 34.615 0.00 0.00 0.00 2.17
328 329 6.696411 TGGTCGCATTTTTCTGGATTTATTT 58.304 32.000 0.00 0.00 0.00 1.40
329 330 6.279513 TGGTCGCATTTTTCTGGATTTATT 57.720 33.333 0.00 0.00 0.00 1.40
330 331 5.913137 TGGTCGCATTTTTCTGGATTTAT 57.087 34.783 0.00 0.00 0.00 1.40
331 332 5.417266 TGATGGTCGCATTTTTCTGGATTTA 59.583 36.000 0.00 0.00 0.00 1.40
332 333 4.220382 TGATGGTCGCATTTTTCTGGATTT 59.780 37.500 0.00 0.00 0.00 2.17
333 334 3.763360 TGATGGTCGCATTTTTCTGGATT 59.237 39.130 0.00 0.00 0.00 3.01
334 335 3.355378 TGATGGTCGCATTTTTCTGGAT 58.645 40.909 0.00 0.00 0.00 3.41
335 336 2.749076 CTGATGGTCGCATTTTTCTGGA 59.251 45.455 0.00 0.00 0.00 3.86
336 337 2.489329 ACTGATGGTCGCATTTTTCTGG 59.511 45.455 0.00 0.00 0.00 3.86
337 338 3.495193 CACTGATGGTCGCATTTTTCTG 58.505 45.455 0.00 0.00 0.00 3.02
338 339 2.095059 GCACTGATGGTCGCATTTTTCT 60.095 45.455 0.00 0.00 0.00 2.52
339 340 2.253603 GCACTGATGGTCGCATTTTTC 58.746 47.619 0.00 0.00 0.00 2.29
340 341 1.067635 GGCACTGATGGTCGCATTTTT 60.068 47.619 0.00 0.00 0.00 1.94
341 342 0.527565 GGCACTGATGGTCGCATTTT 59.472 50.000 0.00 0.00 0.00 1.82
342 343 0.322816 AGGCACTGATGGTCGCATTT 60.323 50.000 0.00 0.00 37.18 2.32
343 344 0.541392 TAGGCACTGATGGTCGCATT 59.459 50.000 0.00 0.00 41.52 3.56
344 345 0.179073 GTAGGCACTGATGGTCGCAT 60.179 55.000 0.00 0.00 41.52 4.73
345 346 1.218047 GTAGGCACTGATGGTCGCA 59.782 57.895 0.00 0.00 41.52 5.10
346 347 1.084370 GTGTAGGCACTGATGGTCGC 61.084 60.000 0.00 0.00 41.52 5.19
347 348 0.460284 GGTGTAGGCACTGATGGTCG 60.460 60.000 0.00 0.00 44.65 4.79
348 349 0.613260 TGGTGTAGGCACTGATGGTC 59.387 55.000 0.00 0.00 44.65 4.02
349 350 0.324943 GTGGTGTAGGCACTGATGGT 59.675 55.000 0.00 0.00 44.65 3.55
350 351 0.324614 TGTGGTGTAGGCACTGATGG 59.675 55.000 0.00 0.00 44.65 3.51
351 352 2.079158 CTTGTGGTGTAGGCACTGATG 58.921 52.381 0.00 0.00 44.65 3.07
352 353 1.977854 TCTTGTGGTGTAGGCACTGAT 59.022 47.619 0.00 0.00 44.65 2.90
353 354 1.419381 TCTTGTGGTGTAGGCACTGA 58.581 50.000 0.00 0.00 44.65 3.41
354 355 2.254546 TTCTTGTGGTGTAGGCACTG 57.745 50.000 0.00 0.00 44.65 3.66
355 356 2.572290 GTTTCTTGTGGTGTAGGCACT 58.428 47.619 0.00 0.00 44.65 4.40
356 357 1.607148 GGTTTCTTGTGGTGTAGGCAC 59.393 52.381 0.00 0.00 44.53 5.01
357 358 1.493022 AGGTTTCTTGTGGTGTAGGCA 59.507 47.619 0.00 0.00 0.00 4.75
358 359 2.271944 AGGTTTCTTGTGGTGTAGGC 57.728 50.000 0.00 0.00 0.00 3.93
359 360 4.070009 GGTTAGGTTTCTTGTGGTGTAGG 58.930 47.826 0.00 0.00 0.00 3.18
360 361 4.710324 TGGTTAGGTTTCTTGTGGTGTAG 58.290 43.478 0.00 0.00 0.00 2.74
361 362 4.774660 TGGTTAGGTTTCTTGTGGTGTA 57.225 40.909 0.00 0.00 0.00 2.90
362 363 3.655615 TGGTTAGGTTTCTTGTGGTGT 57.344 42.857 0.00 0.00 0.00 4.16
363 364 6.001460 TCTAATGGTTAGGTTTCTTGTGGTG 58.999 40.000 0.00 0.00 34.00 4.17
364 365 6.183361 ACTCTAATGGTTAGGTTTCTTGTGGT 60.183 38.462 0.00 0.00 34.00 4.16
365 366 6.238648 ACTCTAATGGTTAGGTTTCTTGTGG 58.761 40.000 0.00 0.00 34.00 4.17
366 367 7.745620 AACTCTAATGGTTAGGTTTCTTGTG 57.254 36.000 0.00 0.00 34.00 3.33
367 368 9.449719 CATAACTCTAATGGTTAGGTTTCTTGT 57.550 33.333 8.06 0.00 33.50 3.16
368 369 8.398665 GCATAACTCTAATGGTTAGGTTTCTTG 58.601 37.037 0.00 6.52 34.66 3.02
369 370 8.107095 TGCATAACTCTAATGGTTAGGTTTCTT 58.893 33.333 0.00 0.00 34.66 2.52
370 371 7.553044 GTGCATAACTCTAATGGTTAGGTTTCT 59.447 37.037 0.00 0.00 34.66 2.52
371 372 7.335924 TGTGCATAACTCTAATGGTTAGGTTTC 59.664 37.037 0.00 0.00 34.66 2.78
372 373 7.172342 TGTGCATAACTCTAATGGTTAGGTTT 58.828 34.615 0.00 1.53 34.66 3.27
373 374 6.717289 TGTGCATAACTCTAATGGTTAGGTT 58.283 36.000 0.00 3.86 34.66 3.50
374 375 6.070194 ACTGTGCATAACTCTAATGGTTAGGT 60.070 38.462 0.00 0.00 34.66 3.08
375 376 6.349300 ACTGTGCATAACTCTAATGGTTAGG 58.651 40.000 0.00 0.00 35.09 2.69
376 377 7.254117 CGAACTGTGCATAACTCTAATGGTTAG 60.254 40.741 0.00 0.00 33.50 2.34
377 378 6.533723 CGAACTGTGCATAACTCTAATGGTTA 59.466 38.462 0.00 0.00 34.32 2.85
378 379 5.351465 CGAACTGTGCATAACTCTAATGGTT 59.649 40.000 0.00 0.00 0.00 3.67
379 380 4.870426 CGAACTGTGCATAACTCTAATGGT 59.130 41.667 0.00 0.00 0.00 3.55
380 381 4.260375 GCGAACTGTGCATAACTCTAATGG 60.260 45.833 0.00 0.00 0.00 3.16
381 382 4.329801 TGCGAACTGTGCATAACTCTAATG 59.670 41.667 0.00 0.00 37.44 1.90
382 383 4.503910 TGCGAACTGTGCATAACTCTAAT 58.496 39.130 0.00 0.00 37.44 1.73
383 384 3.920446 TGCGAACTGTGCATAACTCTAA 58.080 40.909 0.00 0.00 37.44 2.10
384 385 3.586100 TGCGAACTGTGCATAACTCTA 57.414 42.857 0.00 0.00 37.44 2.43
385 386 2.455674 TGCGAACTGTGCATAACTCT 57.544 45.000 0.00 0.00 37.44 3.24
393 394 3.469899 TTATTCACATGCGAACTGTGC 57.530 42.857 0.00 0.00 42.93 4.57
394 395 4.973396 ACATTATTCACATGCGAACTGTG 58.027 39.130 0.00 6.20 44.26 3.66
395 396 6.925610 ATACATTATTCACATGCGAACTGT 57.074 33.333 0.00 5.98 0.00 3.55
396 397 7.909641 TGAAATACATTATTCACATGCGAACTG 59.090 33.333 0.00 0.38 30.94 3.16
397 398 7.984391 TGAAATACATTATTCACATGCGAACT 58.016 30.769 0.00 0.00 30.94 3.01
398 399 8.613613 TTGAAATACATTATTCACATGCGAAC 57.386 30.769 0.00 0.00 35.42 3.95
399 400 9.631452 TTTTGAAATACATTATTCACATGCGAA 57.369 25.926 0.00 0.00 35.42 4.70
400 401 9.631452 TTTTTGAAATACATTATTCACATGCGA 57.369 25.926 0.00 0.00 35.42 5.10
434 435 8.595533 GCCGTATACATCAAGAACATATACATG 58.404 37.037 3.32 0.00 38.21 3.21
435 436 8.311109 TGCCGTATACATCAAGAACATATACAT 58.689 33.333 3.32 0.00 31.13 2.29
436 437 7.662897 TGCCGTATACATCAAGAACATATACA 58.337 34.615 3.32 0.00 31.13 2.29
437 438 8.528917 TTGCCGTATACATCAAGAACATATAC 57.471 34.615 3.32 0.00 0.00 1.47
438 439 9.719355 ATTTGCCGTATACATCAAGAACATATA 57.281 29.630 3.32 0.00 0.00 0.86
439 440 8.506437 CATTTGCCGTATACATCAAGAACATAT 58.494 33.333 3.32 0.00 0.00 1.78
440 441 7.497579 ACATTTGCCGTATACATCAAGAACATA 59.502 33.333 3.32 0.00 0.00 2.29
441 442 6.318648 ACATTTGCCGTATACATCAAGAACAT 59.681 34.615 3.32 0.00 0.00 2.71
442 443 5.645929 ACATTTGCCGTATACATCAAGAACA 59.354 36.000 3.32 0.00 0.00 3.18
443 444 5.965334 CACATTTGCCGTATACATCAAGAAC 59.035 40.000 3.32 0.00 0.00 3.01
444 445 5.645929 ACACATTTGCCGTATACATCAAGAA 59.354 36.000 3.32 0.00 0.00 2.52
445 446 5.064579 CACACATTTGCCGTATACATCAAGA 59.935 40.000 3.32 0.00 0.00 3.02
446 447 5.064579 TCACACATTTGCCGTATACATCAAG 59.935 40.000 3.32 0.00 0.00 3.02
447 448 4.938226 TCACACATTTGCCGTATACATCAA 59.062 37.500 3.32 3.41 0.00 2.57
448 449 4.331443 GTCACACATTTGCCGTATACATCA 59.669 41.667 3.32 0.00 0.00 3.07
449 450 4.331443 TGTCACACATTTGCCGTATACATC 59.669 41.667 3.32 0.00 0.00 3.06
450 451 4.257731 TGTCACACATTTGCCGTATACAT 58.742 39.130 3.32 0.00 0.00 2.29
451 452 3.665190 TGTCACACATTTGCCGTATACA 58.335 40.909 3.32 0.00 0.00 2.29
452 453 4.094294 ACATGTCACACATTTGCCGTATAC 59.906 41.667 0.00 0.00 36.53 1.47
453 454 4.257731 ACATGTCACACATTTGCCGTATA 58.742 39.130 0.00 0.00 36.53 1.47
454 455 3.081061 ACATGTCACACATTTGCCGTAT 58.919 40.909 0.00 0.00 36.53 3.06
455 456 2.499197 ACATGTCACACATTTGCCGTA 58.501 42.857 0.00 0.00 36.53 4.02
456 457 1.317613 ACATGTCACACATTTGCCGT 58.682 45.000 0.00 0.00 36.53 5.68
457 458 3.126686 TCATACATGTCACACATTTGCCG 59.873 43.478 0.00 0.00 36.53 5.69
458 459 4.700268 TCATACATGTCACACATTTGCC 57.300 40.909 0.00 0.00 36.53 4.52
459 460 7.405469 TTTTTCATACATGTCACACATTTGC 57.595 32.000 0.00 0.00 36.53 3.68
460 461 9.194271 TCATTTTTCATACATGTCACACATTTG 57.806 29.630 0.00 0.00 36.53 2.32
461 462 9.932207 ATCATTTTTCATACATGTCACACATTT 57.068 25.926 0.00 0.00 36.53 2.32
464 465 8.676401 CCTATCATTTTTCATACATGTCACACA 58.324 33.333 0.00 0.00 0.00 3.72
465 466 7.645340 GCCTATCATTTTTCATACATGTCACAC 59.355 37.037 0.00 0.00 0.00 3.82
466 467 7.338957 TGCCTATCATTTTTCATACATGTCACA 59.661 33.333 0.00 0.00 0.00 3.58
467 468 7.706159 TGCCTATCATTTTTCATACATGTCAC 58.294 34.615 0.00 0.00 0.00 3.67
468 469 7.878547 TGCCTATCATTTTTCATACATGTCA 57.121 32.000 0.00 0.00 0.00 3.58
809 815 7.201644 GCGTCAATTAATTTGGATCAGAGAGAA 60.202 37.037 0.00 0.00 35.92 2.87
812 818 5.879777 TGCGTCAATTAATTTGGATCAGAGA 59.120 36.000 0.00 0.00 35.92 3.10
817 823 9.301153 ACTAATTTGCGTCAATTAATTTGGATC 57.699 29.630 0.00 0.00 35.92 3.36
838 844 7.843490 AACATCGTACTAAACATGCACTAAT 57.157 32.000 0.00 0.00 0.00 1.73
844 882 7.428183 CCATACAAAACATCGTACTAAACATGC 59.572 37.037 0.00 0.00 0.00 4.06
847 885 6.128227 GCCCATACAAAACATCGTACTAAACA 60.128 38.462 0.00 0.00 0.00 2.83
857 895 3.131046 CCTTCAGGCCCATACAAAACATC 59.869 47.826 0.00 0.00 0.00 3.06
875 913 1.300481 GCCGAGATAACAAGGCCTTC 58.700 55.000 17.29 3.70 43.54 3.46
887 925 1.221021 GAAACGAAGGGGCCGAGAT 59.779 57.895 0.00 0.00 0.00 2.75
889 927 2.436115 GGAAACGAAGGGGCCGAG 60.436 66.667 0.00 0.00 0.00 4.63
950 988 2.302587 TTGAGGGAAATGGGTCAACC 57.697 50.000 0.00 0.00 40.81 3.77
951 989 4.681074 TTTTTGAGGGAAATGGGTCAAC 57.319 40.909 0.00 0.00 0.00 3.18
985 1023 1.748591 GCTCATCTGGATGGGTCAACC 60.749 57.143 11.48 0.00 41.32 3.77
1182 1220 2.300996 CCTGTGCAGGGGTGATACT 58.699 57.895 10.28 0.00 44.87 2.12
1259 1331 0.109873 CACGACTATATCCCGACGGC 60.110 60.000 8.86 0.00 0.00 5.68
1260 1332 1.233019 ACACGACTATATCCCGACGG 58.767 55.000 6.99 6.99 0.00 4.79
1306 1378 5.947228 AGATGGTTGTGTTACATTCAGTG 57.053 39.130 0.00 0.00 0.00 3.66
1320 1392 4.183865 TGCTAATCTGACGAAGATGGTTG 58.816 43.478 6.21 0.68 45.37 3.77
1365 1437 7.427606 GCATTTTCTCGAATCATTGAACTACTG 59.572 37.037 0.00 0.00 0.00 2.74
1377 1449 2.169179 GTGCGTGCATTTTCTCGAATC 58.831 47.619 0.00 0.00 0.00 2.52
1381 1453 1.967762 AATGTGCGTGCATTTTCTCG 58.032 45.000 0.00 0.00 35.76 4.04
1451 1552 8.517878 AGACGCAACTAGTAATTCAGTAAGTTA 58.482 33.333 0.00 0.00 0.00 2.24
1481 1709 5.161358 TGTTTCGTCAGTTAGCTCATAGTG 58.839 41.667 0.00 0.00 0.00 2.74
1482 1710 5.386958 TGTTTCGTCAGTTAGCTCATAGT 57.613 39.130 0.00 0.00 0.00 2.12
1485 1713 5.527582 AGTTTTGTTTCGTCAGTTAGCTCAT 59.472 36.000 0.00 0.00 0.00 2.90
1489 1717 4.279659 CCAGTTTTGTTTCGTCAGTTAGC 58.720 43.478 0.00 0.00 0.00 3.09
1510 1739 1.683385 GCCTATGGAACCATCAAAGCC 59.317 52.381 9.75 0.00 37.82 4.35
1590 1819 3.303725 CGTCAAGAGGAAAACAATGCGAA 60.304 43.478 0.00 0.00 0.00 4.70
1644 1873 1.072806 AGCAAGCCTGAATCACACAGA 59.927 47.619 0.00 0.00 37.54 3.41
1707 1936 1.303074 CTTGGAGAGCAAGCTGGCA 60.303 57.895 17.28 0.00 35.83 4.92
1733 1962 1.980765 TCCCTTGCTGTGAGAATGACT 59.019 47.619 0.00 0.00 0.00 3.41
1778 2007 0.673644 ATTCACGGCAAAGGGACTCG 60.674 55.000 0.00 0.00 38.49 4.18
1865 2094 4.396478 CCATATCTGGTCTCGATATGTCGT 59.604 45.833 11.80 0.00 44.56 4.34
1925 2158 1.999735 CGGCAAGAAATTCGCTACAGA 59.000 47.619 0.00 0.00 0.00 3.41
1926 2159 1.732259 ACGGCAAGAAATTCGCTACAG 59.268 47.619 0.00 0.00 0.00 2.74
1927 2160 1.803334 ACGGCAAGAAATTCGCTACA 58.197 45.000 0.00 0.00 0.00 2.74
1932 2165 4.141855 AGTACAAACGGCAAGAAATTCG 57.858 40.909 0.00 0.00 0.00 3.34
1937 2170 4.156190 TCACAAAAGTACAAACGGCAAGAA 59.844 37.500 0.00 0.00 0.00 2.52
2162 2396 9.905713 AATTCAAAAGCCTACAGAATGATACTA 57.094 29.630 0.00 0.00 39.69 1.82
2164 2398 9.508567 GAAATTCAAAAGCCTACAGAATGATAC 57.491 33.333 0.00 0.00 39.69 2.24
2165 2399 8.686334 GGAAATTCAAAAGCCTACAGAATGATA 58.314 33.333 0.00 0.00 39.69 2.15
2170 2404 6.723298 TTGGAAATTCAAAAGCCTACAGAA 57.277 33.333 0.00 0.00 0.00 3.02
2171 2405 6.723298 TTTGGAAATTCAAAAGCCTACAGA 57.277 33.333 0.00 0.00 34.17 3.41
2295 2529 1.770658 CAGCCCATCTGTATCCCTTCA 59.229 52.381 0.00 0.00 38.02 3.02
2297 2531 2.196742 TCAGCCCATCTGTATCCCTT 57.803 50.000 0.00 0.00 43.32 3.95
2371 2608 4.666512 ACTGGTTTTGCTAACATGGATCT 58.333 39.130 0.00 0.00 0.00 2.75
2427 2664 2.028930 GTGGCATACGAGGGAGGAATAG 60.029 54.545 0.00 0.00 0.00 1.73
2611 2960 9.715121 ATAATTCACTTCAAATTCAATGTGCTT 57.285 25.926 0.00 0.00 0.00 3.91
2612 2961 9.715121 AATAATTCACTTCAAATTCAATGTGCT 57.285 25.926 0.00 0.00 0.00 4.40
2636 2995 8.620416 TGCTATTTTGTAGCGTATCAATCAAAT 58.380 29.630 2.99 0.00 43.13 2.32
2649 3008 4.889995 AGGGAAAGGATGCTATTTTGTAGC 59.110 41.667 0.28 0.28 40.76 3.58
2662 3021 5.905913 ACATGCTACTAAGTAGGGAAAGGAT 59.094 40.000 0.00 0.00 36.71 3.24
2779 3140 8.768955 CAGGCATGAATATTCTTACTACAGTTC 58.231 37.037 16.24 0.00 0.00 3.01
2789 3150 7.427989 ACCAAAATCAGGCATGAATATTCTT 57.572 32.000 16.24 7.48 39.39 2.52
2826 3187 8.870160 TTAAATGCATAATTCAAAATCTCCCG 57.130 30.769 0.00 0.00 0.00 5.14
2938 3299 6.092122 TGTTTAGACATTTTACTGCCTCATCG 59.908 38.462 0.00 0.00 0.00 3.84
2941 3302 5.472137 GGTGTTTAGACATTTTACTGCCTCA 59.528 40.000 0.00 0.00 38.23 3.86
2959 3320 5.818678 TCAGTCCATAGTAGTTGGTGTTT 57.181 39.130 0.00 0.00 35.64 2.83
3010 3371 3.614092 TCCTGATGTGGATTTCTTCAGC 58.386 45.455 0.00 0.00 36.45 4.26
3095 3456 8.851145 TGCCATTTACATTTTTGACTACAGTTA 58.149 29.630 0.00 0.00 0.00 2.24
3105 3466 9.039870 TGACTAAAGTTGCCATTTACATTTTTG 57.960 29.630 0.00 0.00 0.00 2.44
3134 3495 1.611261 TACAGGTGCGGTTAGGCCT 60.611 57.895 11.78 11.78 34.25 5.19
3529 3890 1.856873 ATCACCAAGCCTCCCCCAA 60.857 57.895 0.00 0.00 0.00 4.12
3761 4122 6.070538 AGTCAGATAACAGCAATAGACTGGTT 60.071 38.462 0.00 0.00 39.55 3.67
3779 4140 4.660303 TCAGGCACCCATATAAAGTCAGAT 59.340 41.667 0.00 0.00 0.00 2.90
3780 4141 4.037222 TCAGGCACCCATATAAAGTCAGA 58.963 43.478 0.00 0.00 0.00 3.27
3781 4142 4.422073 TCAGGCACCCATATAAAGTCAG 57.578 45.455 0.00 0.00 0.00 3.51
3782 4143 4.411869 TGATCAGGCACCCATATAAAGTCA 59.588 41.667 0.00 0.00 0.00 3.41
3783 4144 4.973168 TGATCAGGCACCCATATAAAGTC 58.027 43.478 0.00 0.00 0.00 3.01
3784 4145 5.380043 CTTGATCAGGCACCCATATAAAGT 58.620 41.667 0.00 0.00 0.00 2.66
3785 4146 4.763793 CCTTGATCAGGCACCCATATAAAG 59.236 45.833 0.00 0.00 35.13 1.85
3981 4344 2.092914 GGTCTCGGAGGATCAACCAAAT 60.093 50.000 4.96 0.00 42.04 2.32
4167 4542 3.548818 CGCCTTCATTAACAGCAATAGGC 60.549 47.826 0.00 0.00 42.63 3.93
4168 4543 3.876914 TCGCCTTCATTAACAGCAATAGG 59.123 43.478 0.00 0.00 0.00 2.57
4171 4549 3.947196 TCATCGCCTTCATTAACAGCAAT 59.053 39.130 0.00 0.00 0.00 3.56
4209 4587 1.215382 CGATCGGACCTTGCACTGA 59.785 57.895 7.38 0.00 0.00 3.41
4214 4592 0.931005 GTGATTCGATCGGACCTTGC 59.069 55.000 16.41 0.00 0.00 4.01
4219 4597 5.282510 AGATAAGTTGTGATTCGATCGGAC 58.717 41.667 16.41 7.79 0.00 4.79
4220 4598 5.515797 AGATAAGTTGTGATTCGATCGGA 57.484 39.130 16.41 7.00 0.00 4.55
4222 4600 7.220875 TGAGAAAGATAAGTTGTGATTCGATCG 59.779 37.037 9.36 9.36 0.00 3.69
4223 4601 8.412608 TGAGAAAGATAAGTTGTGATTCGATC 57.587 34.615 0.00 0.00 0.00 3.69
4224 4602 7.010923 GCTGAGAAAGATAAGTTGTGATTCGAT 59.989 37.037 0.00 0.00 0.00 3.59
4225 4603 6.311445 GCTGAGAAAGATAAGTTGTGATTCGA 59.689 38.462 0.00 0.00 0.00 3.71
4250 4628 4.563184 GGTAGCATGTACAGAAGAGAAACG 59.437 45.833 0.33 0.00 0.00 3.60
4271 4649 1.210204 ATGATCCCTGCACCTGTGGT 61.210 55.000 0.00 0.00 35.62 4.16
4281 4659 1.539929 GCCAGAAGACGATGATCCCTG 60.540 57.143 0.00 0.00 0.00 4.45
4282 4660 0.755686 GCCAGAAGACGATGATCCCT 59.244 55.000 0.00 0.00 0.00 4.20
4319 4699 0.986019 AGACCCCATCGCCAATACCA 60.986 55.000 0.00 0.00 0.00 3.25
4331 4711 2.505819 GGATTCTGCTTCTTAGACCCCA 59.494 50.000 0.00 0.00 0.00 4.96
4357 4737 1.092348 CGAGAGGGTATGTGACACGA 58.908 55.000 0.22 0.00 36.14 4.35
4359 4739 1.202313 GCTCGAGAGGGTATGTGACAC 60.202 57.143 18.75 0.00 0.00 3.67
4364 4744 2.445682 AGAAGCTCGAGAGGGTATGT 57.554 50.000 18.75 0.00 0.00 2.29
4386 4766 0.881600 GCTGTGCCTTTTGCTTTGGG 60.882 55.000 0.00 0.00 42.00 4.12
4400 4780 1.676967 GCTGGGGGAGAAAGCTGTG 60.677 63.158 0.00 0.00 34.05 3.66
4411 4791 1.281925 ACCATTCCTAGTGCTGGGGG 61.282 60.000 1.75 0.00 32.89 5.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.