Multiple sequence alignment - TraesCS2A01G098000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G098000 chr2A 100.000 3959 0 0 1 3959 51577472 51581430 0.000000e+00 7312.0
1 TraesCS2A01G098000 chr2A 97.727 44 1 0 1545 1588 51578973 51579016 4.240000e-10 76.8
2 TraesCS2A01G098000 chr2A 97.727 44 1 0 1502 1545 51579016 51579059 4.240000e-10 76.8
3 TraesCS2A01G098000 chr2B 84.996 1293 140 33 2571 3848 77166386 77167639 0.000000e+00 1264.0
4 TraesCS2A01G098000 chr2B 90.463 713 44 13 1834 2535 77165689 77166388 0.000000e+00 918.0
5 TraesCS2A01G098000 chr2B 87.380 729 50 20 843 1545 77164699 77165411 0.000000e+00 798.0
6 TraesCS2A01G098000 chr2B 83.068 502 62 12 34 527 77157908 77158394 6.080000e-118 435.0
7 TraesCS2A01G098000 chr2D 94.564 699 34 3 1840 2535 49872966 49873663 0.000000e+00 1077.0
8 TraesCS2A01G098000 chr2D 89.413 869 50 18 713 1545 49871734 49872596 0.000000e+00 1057.0
9 TraesCS2A01G098000 chr2D 92.273 660 43 7 2571 3225 49873661 49874317 0.000000e+00 929.0
10 TraesCS2A01G098000 chr2D 81.949 554 72 19 3307 3845 49874372 49874912 1.010000e-120 444.0
11 TraesCS2A01G098000 chr2D 81.250 592 61 15 40 613 49870952 49870393 2.190000e-117 433.0
12 TraesCS2A01G098000 chr2D 83.391 289 37 5 1547 1833 49872555 49872834 1.410000e-64 257.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G098000 chr2A 51577472 51581430 3958 False 2488.533333 7312 98.484667 1 3959 3 chr2A.!!$F1 3958
1 TraesCS2A01G098000 chr2B 77164699 77167639 2940 False 993.333333 1264 87.613000 843 3848 3 chr2B.!!$F2 3005
2 TraesCS2A01G098000 chr2D 49871734 49874912 3178 False 752.800000 1077 88.318000 713 3845 5 chr2D.!!$F1 3132
3 TraesCS2A01G098000 chr2D 49870393 49870952 559 True 433.000000 433 81.250000 40 613 1 chr2D.!!$R1 573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
24 25 0.030092 CCTCCCCTTCCCTACCATGA 60.030 60.0 0.00 0.0 0.00 3.07 F
155 159 0.109458 TATCGCGCACCATATCGTCC 60.109 55.0 8.75 0.0 0.00 4.79 F
877 907 0.110486 GATCGCCCTCCTCTCTCTCT 59.890 60.0 0.00 0.0 0.00 3.10 F
1529 1590 0.179094 ACGTGCCGTCTGAAACTTCA 60.179 50.0 0.00 0.0 33.69 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1409 1461 0.030369 AACCGTAGCCGCTCTAATCG 59.970 55.0 0.0 0.0 0.0 3.34 R
1683 1744 0.754472 ACTCGTCGGGGAAAGTGAAA 59.246 50.0 0.0 0.0 0.0 2.69 R
1689 1750 0.754472 AAAGTCACTCGTCGGGGAAA 59.246 50.0 0.0 0.0 0.0 3.13 R
3385 3604 0.035458 CAGTCGGTCCTCCAGCTTTT 59.965 55.0 0.0 0.0 0.0 2.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.371231 CACCCCCTCCCCTTCCCT 62.371 72.222 0.00 0.00 0.00 4.20
18 19 2.545293 ACCCCCTCCCCTTCCCTA 60.545 66.667 0.00 0.00 0.00 3.53
19 20 2.039724 CCCCCTCCCCTTCCCTAC 60.040 72.222 0.00 0.00 0.00 3.18
20 21 2.039724 CCCCTCCCCTTCCCTACC 60.040 72.222 0.00 0.00 0.00 3.18
21 22 2.792222 CCCTCCCCTTCCCTACCA 59.208 66.667 0.00 0.00 0.00 3.25
22 23 1.321943 CCCTCCCCTTCCCTACCAT 59.678 63.158 0.00 0.00 0.00 3.55
23 24 1.062488 CCCTCCCCTTCCCTACCATG 61.062 65.000 0.00 0.00 0.00 3.66
24 25 0.030092 CCTCCCCTTCCCTACCATGA 60.030 60.000 0.00 0.00 0.00 3.07
25 26 1.628043 CCTCCCCTTCCCTACCATGAA 60.628 57.143 0.00 0.00 0.00 2.57
26 27 1.490910 CTCCCCTTCCCTACCATGAAC 59.509 57.143 0.00 0.00 0.00 3.18
27 28 0.551396 CCCCTTCCCTACCATGAACC 59.449 60.000 0.00 0.00 0.00 3.62
28 29 1.295020 CCCTTCCCTACCATGAACCA 58.705 55.000 0.00 0.00 0.00 3.67
29 30 1.064685 CCCTTCCCTACCATGAACCAC 60.065 57.143 0.00 0.00 0.00 4.16
30 31 1.064685 CCTTCCCTACCATGAACCACC 60.065 57.143 0.00 0.00 0.00 4.61
31 32 0.996583 TTCCCTACCATGAACCACCC 59.003 55.000 0.00 0.00 0.00 4.61
32 33 1.223487 CCCTACCATGAACCACCCG 59.777 63.158 0.00 0.00 0.00 5.28
33 34 1.559065 CCCTACCATGAACCACCCGT 61.559 60.000 0.00 0.00 0.00 5.28
34 35 0.392461 CCTACCATGAACCACCCGTG 60.392 60.000 0.00 0.00 0.00 4.94
35 36 0.611200 CTACCATGAACCACCCGTGA 59.389 55.000 0.00 0.00 0.00 4.35
36 37 0.611200 TACCATGAACCACCCGTGAG 59.389 55.000 0.00 0.00 0.00 3.51
37 38 2.040544 CCATGAACCACCCGTGAGC 61.041 63.158 0.00 0.00 0.00 4.26
38 39 1.302431 CATGAACCACCCGTGAGCA 60.302 57.895 0.00 0.00 0.00 4.26
54 55 2.982744 GCAGTTGCCTTTCGCCCTC 61.983 63.158 0.00 0.00 36.24 4.30
94 98 4.204028 CCCCAACATAGGCCCCGG 62.204 72.222 0.00 0.00 0.00 5.73
125 129 4.122670 CCCCCTCCCATCCCCTCA 62.123 72.222 0.00 0.00 0.00 3.86
128 132 1.615262 CCCTCCCATCCCCTCAAAC 59.385 63.158 0.00 0.00 0.00 2.93
129 133 1.224592 CCTCCCATCCCCTCAAACG 59.775 63.158 0.00 0.00 0.00 3.60
139 143 0.463833 CCCTCAAACGTGGCCCTATC 60.464 60.000 0.00 0.00 0.00 2.08
151 155 1.084370 GCCCTATCGCGCACCATATC 61.084 60.000 8.75 0.00 0.00 1.63
155 159 0.109458 TATCGCGCACCATATCGTCC 60.109 55.000 8.75 0.00 0.00 4.79
183 187 2.684881 CGCTATTCCTTTGCCATGACTT 59.315 45.455 0.00 0.00 0.00 3.01
190 194 2.094854 CCTTTGCCATGACTTGAAGCTC 60.095 50.000 0.00 0.00 0.00 4.09
195 199 0.250234 CATGACTTGAAGCTCCGGGA 59.750 55.000 0.00 0.00 0.00 5.14
198 202 1.351017 TGACTTGAAGCTCCGGGATTT 59.649 47.619 0.00 0.00 0.00 2.17
199 203 2.224769 TGACTTGAAGCTCCGGGATTTT 60.225 45.455 0.00 0.00 0.00 1.82
200 204 2.162408 GACTTGAAGCTCCGGGATTTTG 59.838 50.000 0.00 0.00 0.00 2.44
201 205 2.224769 ACTTGAAGCTCCGGGATTTTGA 60.225 45.455 0.00 0.00 0.00 2.69
202 206 1.821216 TGAAGCTCCGGGATTTTGAC 58.179 50.000 0.00 0.00 0.00 3.18
203 207 1.351017 TGAAGCTCCGGGATTTTGACT 59.649 47.619 0.00 0.00 0.00 3.41
204 208 1.740025 GAAGCTCCGGGATTTTGACTG 59.260 52.381 0.00 0.00 0.00 3.51
205 209 0.693049 AGCTCCGGGATTTTGACTGT 59.307 50.000 0.00 0.00 0.00 3.55
206 210 1.073923 AGCTCCGGGATTTTGACTGTT 59.926 47.619 0.00 0.00 0.00 3.16
207 211 1.468914 GCTCCGGGATTTTGACTGTTC 59.531 52.381 0.00 0.00 0.00 3.18
208 212 2.084546 CTCCGGGATTTTGACTGTTCC 58.915 52.381 0.00 0.00 0.00 3.62
209 213 1.173913 CCGGGATTTTGACTGTTCCC 58.826 55.000 4.69 4.69 43.75 3.97
210 214 1.173913 CGGGATTTTGACTGTTCCCC 58.826 55.000 8.55 0.00 44.23 4.81
211 215 1.557099 GGGATTTTGACTGTTCCCCC 58.443 55.000 3.53 0.00 41.75 5.40
212 216 1.077169 GGGATTTTGACTGTTCCCCCT 59.923 52.381 3.53 0.00 41.75 4.79
213 217 2.171003 GGATTTTGACTGTTCCCCCTG 58.829 52.381 0.00 0.00 0.00 4.45
214 218 2.490902 GGATTTTGACTGTTCCCCCTGT 60.491 50.000 0.00 0.00 0.00 4.00
215 219 2.838637 TTTTGACTGTTCCCCCTGTT 57.161 45.000 0.00 0.00 0.00 3.16
216 220 2.358322 TTTGACTGTTCCCCCTGTTC 57.642 50.000 0.00 0.00 0.00 3.18
217 221 1.217916 TTGACTGTTCCCCCTGTTCA 58.782 50.000 0.00 0.00 0.00 3.18
272 276 1.538047 ATCGCATGTTGCAAGAAGGT 58.462 45.000 0.00 0.00 45.36 3.50
284 288 3.119245 TGCAAGAAGGTACCGTGATCTAC 60.119 47.826 4.59 5.75 0.00 2.59
286 290 4.337555 GCAAGAAGGTACCGTGATCTACTA 59.662 45.833 4.59 0.00 0.00 1.82
289 293 5.367302 AGAAGGTACCGTGATCTACTAGTC 58.633 45.833 4.59 0.00 0.00 2.59
292 296 3.247173 GGTACCGTGATCTACTAGTCGTG 59.753 52.174 0.00 0.00 0.00 4.35
295 299 3.755378 ACCGTGATCTACTAGTCGTGTTT 59.245 43.478 0.00 0.00 0.00 2.83
303 307 2.037144 ACTAGTCGTGTTTGGTGAGGT 58.963 47.619 0.00 0.00 0.00 3.85
313 317 1.398958 TTGGTGAGGTTGCTTTGCCC 61.399 55.000 0.00 0.00 0.00 5.36
316 320 0.823356 GTGAGGTTGCTTTGCCCAGA 60.823 55.000 0.00 0.00 0.00 3.86
317 321 0.112995 TGAGGTTGCTTTGCCCAGAT 59.887 50.000 0.00 0.00 0.00 2.90
318 322 0.813821 GAGGTTGCTTTGCCCAGATC 59.186 55.000 0.00 0.00 0.00 2.75
319 323 0.112995 AGGTTGCTTTGCCCAGATCA 59.887 50.000 0.00 0.00 0.00 2.92
320 324 0.968405 GGTTGCTTTGCCCAGATCAA 59.032 50.000 0.00 0.00 0.00 2.57
321 325 1.551883 GGTTGCTTTGCCCAGATCAAT 59.448 47.619 0.00 0.00 0.00 2.57
322 326 2.027837 GGTTGCTTTGCCCAGATCAATT 60.028 45.455 0.00 0.00 0.00 2.32
323 327 2.997986 GTTGCTTTGCCCAGATCAATTG 59.002 45.455 0.00 0.00 0.00 2.32
324 328 2.250031 TGCTTTGCCCAGATCAATTGT 58.750 42.857 5.13 0.00 0.00 2.71
325 329 3.429492 TGCTTTGCCCAGATCAATTGTA 58.571 40.909 5.13 0.00 0.00 2.41
326 330 3.193267 TGCTTTGCCCAGATCAATTGTAC 59.807 43.478 5.13 1.15 0.00 2.90
332 336 4.080413 TGCCCAGATCAATTGTACATCTGA 60.080 41.667 25.92 14.89 44.35 3.27
335 339 6.293698 CCCAGATCAATTGTACATCTGATGA 58.706 40.000 25.92 10.61 44.35 2.92
345 349 3.488778 ACATCTGATGAGGATGCTTCC 57.511 47.619 23.59 10.66 42.88 3.46
356 360 1.300481 GATGCTTCCGAAACCCTAGC 58.700 55.000 0.00 0.00 0.00 3.42
357 361 0.912486 ATGCTTCCGAAACCCTAGCT 59.088 50.000 0.00 0.00 33.15 3.32
363 367 3.386932 TCCGAAACCCTAGCTACCTAA 57.613 47.619 0.00 0.00 0.00 2.69
371 375 5.405063 ACCCTAGCTACCTAATTCTCTCA 57.595 43.478 0.00 0.00 0.00 3.27
378 382 5.182380 AGCTACCTAATTCTCTCATACGAGC 59.818 44.000 0.00 0.00 39.30 5.03
379 383 5.048643 GCTACCTAATTCTCTCATACGAGCA 60.049 44.000 0.00 0.00 39.30 4.26
399 403 1.083489 TATGTTGCTCGCGGGAAAAG 58.917 50.000 12.03 0.00 0.00 2.27
408 413 1.625759 CGCGGGAAAAGGCATTTTGC 61.626 55.000 18.25 18.25 43.72 3.68
441 451 2.987232 CTTCTGTAGCAGGTAAACCCC 58.013 52.381 0.00 0.00 36.42 4.95
494 504 7.741027 TGCCAATTGAAAATTTTCATTAGCA 57.259 28.000 29.13 28.51 45.65 3.49
522 539 2.166050 ACAGCAAAACACTTGTGCATCA 59.834 40.909 0.10 0.00 40.83 3.07
527 544 4.259930 GCAAAACACTTGTGCATCAACTTC 60.260 41.667 0.10 0.00 38.19 3.01
538 555 2.094494 GCATCAACTTCGGTCTCTCTGA 60.094 50.000 0.00 0.00 0.00 3.27
547 564 2.497273 TCGGTCTCTCTGATTTGCATCA 59.503 45.455 0.00 0.00 37.05 3.07
552 569 5.221009 GGTCTCTCTGATTTGCATCATTTCC 60.221 44.000 0.00 0.00 38.81 3.13
556 573 3.129113 TCTGATTTGCATCATTTCCCACG 59.871 43.478 0.00 0.00 38.81 4.94
560 577 0.679640 TGCATCATTTCCCACGGGAC 60.680 55.000 3.66 0.00 45.11 4.46
610 629 2.917933 TCCCCTGTGAAAGATATTGCG 58.082 47.619 0.00 0.00 0.00 4.85
613 632 3.560068 CCCCTGTGAAAGATATTGCGTAC 59.440 47.826 0.00 0.00 0.00 3.67
614 633 4.442706 CCCTGTGAAAGATATTGCGTACT 58.557 43.478 0.00 0.00 0.00 2.73
615 634 4.271049 CCCTGTGAAAGATATTGCGTACTG 59.729 45.833 0.00 0.00 0.00 2.74
616 635 4.870426 CCTGTGAAAGATATTGCGTACTGT 59.130 41.667 0.00 0.00 0.00 3.55
617 636 5.351465 CCTGTGAAAGATATTGCGTACTGTT 59.649 40.000 0.00 0.00 0.00 3.16
618 637 6.128282 CCTGTGAAAGATATTGCGTACTGTTT 60.128 38.462 0.00 0.00 0.00 2.83
619 638 7.197071 TGTGAAAGATATTGCGTACTGTTTT 57.803 32.000 0.00 0.00 0.00 2.43
620 639 7.644490 TGTGAAAGATATTGCGTACTGTTTTT 58.356 30.769 0.00 0.00 0.00 1.94
672 691 3.599046 GAGCATCGACAGCCTATTTTG 57.401 47.619 7.97 0.00 0.00 2.44
673 692 3.198068 GAGCATCGACAGCCTATTTTGA 58.802 45.455 7.97 0.00 0.00 2.69
674 693 3.201290 AGCATCGACAGCCTATTTTGAG 58.799 45.455 7.97 0.00 0.00 3.02
675 694 3.118629 AGCATCGACAGCCTATTTTGAGA 60.119 43.478 7.97 0.00 0.00 3.27
676 695 3.623060 GCATCGACAGCCTATTTTGAGAA 59.377 43.478 0.35 0.00 0.00 2.87
677 696 4.274459 GCATCGACAGCCTATTTTGAGAAT 59.726 41.667 0.35 0.00 0.00 2.40
678 697 5.220931 GCATCGACAGCCTATTTTGAGAATT 60.221 40.000 0.35 0.00 0.00 2.17
679 698 6.017934 GCATCGACAGCCTATTTTGAGAATTA 60.018 38.462 0.35 0.00 0.00 1.40
680 699 6.903883 TCGACAGCCTATTTTGAGAATTAC 57.096 37.500 0.00 0.00 0.00 1.89
681 700 6.640518 TCGACAGCCTATTTTGAGAATTACT 58.359 36.000 0.00 0.00 0.00 2.24
682 701 6.535150 TCGACAGCCTATTTTGAGAATTACTG 59.465 38.462 0.00 0.00 0.00 2.74
683 702 6.313905 CGACAGCCTATTTTGAGAATTACTGT 59.686 38.462 0.00 0.00 37.35 3.55
684 703 7.148407 CGACAGCCTATTTTGAGAATTACTGTT 60.148 37.037 0.00 0.00 34.98 3.16
685 704 8.409358 ACAGCCTATTTTGAGAATTACTGTTT 57.591 30.769 0.00 0.00 30.94 2.83
686 705 8.860088 ACAGCCTATTTTGAGAATTACTGTTTT 58.140 29.630 0.00 0.00 30.94 2.43
687 706 9.696917 CAGCCTATTTTGAGAATTACTGTTTTT 57.303 29.630 0.00 0.00 0.00 1.94
708 727 6.870971 TTTTTAGTGGCGAGAATTACTGTT 57.129 33.333 0.00 0.00 0.00 3.16
709 728 5.856126 TTTAGTGGCGAGAATTACTGTTG 57.144 39.130 0.00 0.00 0.00 3.33
710 729 3.402628 AGTGGCGAGAATTACTGTTGT 57.597 42.857 0.00 0.00 0.00 3.32
711 730 3.740115 AGTGGCGAGAATTACTGTTGTT 58.260 40.909 0.00 0.00 0.00 2.83
720 739 5.316167 AGAATTACTGTTGTTGATGGAGCA 58.684 37.500 0.00 0.00 0.00 4.26
721 740 5.182001 AGAATTACTGTTGTTGATGGAGCAC 59.818 40.000 0.00 0.00 0.00 4.40
738 757 1.035385 CACGGGAAACTAATGGGCCC 61.035 60.000 17.59 17.59 35.40 5.80
877 907 0.110486 GATCGCCCTCCTCTCTCTCT 59.890 60.000 0.00 0.00 0.00 3.10
1233 1285 1.586303 TCAGATCGATCACGCACGC 60.586 57.895 26.47 0.00 39.58 5.34
1235 1287 1.066422 AGATCGATCACGCACGCAT 59.934 52.632 26.47 0.02 39.58 4.73
1238 1290 1.268778 ATCGATCACGCACGCATACG 61.269 55.000 0.00 0.00 41.67 3.06
1259 1311 6.971527 ACGTACGTAATTCAATCAAATCCA 57.028 33.333 21.41 0.00 0.00 3.41
1260 1312 7.548196 ACGTACGTAATTCAATCAAATCCAT 57.452 32.000 21.41 0.00 0.00 3.41
1290 1342 2.782615 CGCCCGGTTTCGAATCAC 59.217 61.111 0.00 0.00 39.00 3.06
1292 1344 2.030958 GCCCGGTTTCGAATCACGT 61.031 57.895 0.00 0.00 43.13 4.49
1327 1379 1.001020 AAATCCCCAGTGCGATGCA 60.001 52.632 0.00 0.00 35.60 3.96
1356 1408 2.202932 CTCGCCTTATGCCGCACT 60.203 61.111 0.00 0.00 36.24 4.40
1384 1436 0.519077 CGCTCGATCCGATGAGATCA 59.481 55.000 10.34 0.00 42.40 2.92
1386 1438 1.727535 GCTCGATCCGATGAGATCACG 60.728 57.143 10.34 0.00 42.40 4.35
1393 1445 1.538849 CCGATGAGATCACGCCATGAA 60.539 52.381 0.00 0.00 41.93 2.57
1419 1471 4.555360 CGAAGGTATTGATCGATTAGAGCG 59.445 45.833 0.00 0.00 38.28 5.03
1422 1474 3.367498 GGTATTGATCGATTAGAGCGGCT 60.367 47.826 0.00 0.00 38.28 5.52
1434 1490 4.895854 GCGGCTACGGTTAAGTGA 57.104 55.556 0.00 0.00 41.36 3.41
1440 1496 4.984161 GCGGCTACGGTTAAGTGATAATTA 59.016 41.667 0.00 0.00 41.36 1.40
1441 1497 5.107722 GCGGCTACGGTTAAGTGATAATTAC 60.108 44.000 0.00 0.00 41.36 1.89
1463 1520 2.941064 GACTACGGTTGATTTAAGCCCC 59.059 50.000 0.00 0.00 33.23 5.80
1465 1522 3.776417 ACTACGGTTGATTTAAGCCCCTA 59.224 43.478 0.00 0.00 33.23 3.53
1509 1570 4.574013 GTGAGCCTCCATTGTTATCTGAAG 59.426 45.833 0.00 0.00 0.00 3.02
1510 1571 4.471025 TGAGCCTCCATTGTTATCTGAAGA 59.529 41.667 0.00 0.00 0.00 2.87
1511 1572 4.775236 AGCCTCCATTGTTATCTGAAGAC 58.225 43.478 0.00 0.00 0.00 3.01
1512 1573 3.557595 GCCTCCATTGTTATCTGAAGACG 59.442 47.826 0.00 0.00 0.00 4.18
1513 1574 4.759782 CCTCCATTGTTATCTGAAGACGT 58.240 43.478 0.00 0.00 0.00 4.34
1514 1575 4.568359 CCTCCATTGTTATCTGAAGACGTG 59.432 45.833 0.00 0.00 0.00 4.49
1515 1576 3.932710 TCCATTGTTATCTGAAGACGTGC 59.067 43.478 0.00 0.00 0.00 5.34
1516 1577 3.063997 CCATTGTTATCTGAAGACGTGCC 59.936 47.826 0.00 0.00 0.00 5.01
1517 1578 1.990799 TGTTATCTGAAGACGTGCCG 58.009 50.000 0.00 0.00 0.00 5.69
1518 1579 1.271379 TGTTATCTGAAGACGTGCCGT 59.729 47.619 0.00 0.00 45.10 5.68
1527 1588 4.848685 ACGTGCCGTCTGAAACTT 57.151 50.000 0.00 0.00 33.69 2.66
1528 1589 2.601562 ACGTGCCGTCTGAAACTTC 58.398 52.632 0.00 0.00 33.69 3.01
1529 1590 0.179094 ACGTGCCGTCTGAAACTTCA 60.179 50.000 0.00 0.00 33.69 3.02
1530 1591 1.148310 CGTGCCGTCTGAAACTTCAT 58.852 50.000 0.00 0.00 36.46 2.57
1531 1592 2.288579 ACGTGCCGTCTGAAACTTCATA 60.289 45.455 0.00 0.00 33.69 2.15
1532 1593 2.930040 CGTGCCGTCTGAAACTTCATAT 59.070 45.455 0.00 0.00 36.46 1.78
1533 1594 3.370978 CGTGCCGTCTGAAACTTCATATT 59.629 43.478 0.00 0.00 36.46 1.28
1534 1595 4.142902 CGTGCCGTCTGAAACTTCATATTT 60.143 41.667 0.00 0.00 36.46 1.40
1535 1596 5.088739 GTGCCGTCTGAAACTTCATATTTG 58.911 41.667 0.00 0.00 36.46 2.32
1536 1597 4.759693 TGCCGTCTGAAACTTCATATTTGT 59.240 37.500 0.00 0.00 36.46 2.83
1537 1598 5.088739 GCCGTCTGAAACTTCATATTTGTG 58.911 41.667 0.00 0.00 36.46 3.33
1538 1599 5.106712 GCCGTCTGAAACTTCATATTTGTGA 60.107 40.000 0.00 0.00 36.46 3.58
1539 1600 6.307155 CCGTCTGAAACTTCATATTTGTGAC 58.693 40.000 0.00 0.00 36.46 3.67
1540 1601 6.073276 CCGTCTGAAACTTCATATTTGTGACA 60.073 38.462 0.00 0.00 36.46 3.58
1541 1602 7.011773 CGTCTGAAACTTCATATTTGTGACAG 58.988 38.462 0.00 0.00 36.46 3.51
1542 1603 7.307396 CGTCTGAAACTTCATATTTGTGACAGT 60.307 37.037 0.00 0.00 36.46 3.55
1543 1604 8.012241 GTCTGAAACTTCATATTTGTGACAGTC 58.988 37.037 0.00 0.00 36.46 3.51
1544 1605 7.933577 TCTGAAACTTCATATTTGTGACAGTCT 59.066 33.333 1.31 0.00 36.46 3.24
1545 1606 9.208022 CTGAAACTTCATATTTGTGACAGTCTA 57.792 33.333 1.31 0.00 36.46 2.59
1574 1635 3.987868 GACGTGCTGTCTGAAACTTCATA 59.012 43.478 0.00 0.00 44.58 2.15
1614 1675 5.066117 CAGATGAATGATTGGTTCAGGTCAG 59.934 44.000 0.00 0.00 38.81 3.51
1622 1683 1.694150 TGGTTCAGGTCAGAGTTGAGG 59.306 52.381 0.00 0.00 32.98 3.86
1629 1690 3.072476 CAGGTCAGAGTTGAGGGGTAAAA 59.928 47.826 0.00 0.00 32.98 1.52
1664 1725 6.331369 TGAACATTTTCCTTGGTGAGATTC 57.669 37.500 0.00 0.00 0.00 2.52
1666 1727 5.972107 ACATTTTCCTTGGTGAGATTCAG 57.028 39.130 0.00 0.00 0.00 3.02
1670 1731 8.057623 ACATTTTCCTTGGTGAGATTCAGATAT 58.942 33.333 0.00 0.00 0.00 1.63
1689 1750 7.609146 TCAGATATTGAACAGCTTGATTTCACT 59.391 33.333 0.00 0.00 31.34 3.41
1699 1760 1.803334 TGATTTCACTTTCCCCGACG 58.197 50.000 0.00 0.00 0.00 5.12
1704 1765 0.824595 TCACTTTCCCCGACGAGTGA 60.825 55.000 11.11 11.11 44.36 3.41
1711 1772 0.032952 CCCCGACGAGTGACTTTCAA 59.967 55.000 0.00 0.00 0.00 2.69
1727 1788 5.249420 ACTTTCAACTAGAAATCTCCAGCC 58.751 41.667 0.00 0.00 44.75 4.85
1728 1789 4.908601 TTCAACTAGAAATCTCCAGCCA 57.091 40.909 0.00 0.00 32.05 4.75
1732 1793 1.487976 CTAGAAATCTCCAGCCAGCCA 59.512 52.381 0.00 0.00 0.00 4.75
1734 1795 0.322816 GAAATCTCCAGCCAGCCACA 60.323 55.000 0.00 0.00 0.00 4.17
1736 1797 2.490270 AATCTCCAGCCAGCCACACC 62.490 60.000 0.00 0.00 0.00 4.16
1737 1798 3.644606 CTCCAGCCAGCCACACCT 61.645 66.667 0.00 0.00 0.00 4.00
1738 1799 3.914579 CTCCAGCCAGCCACACCTG 62.915 68.421 0.00 0.00 0.00 4.00
1739 1800 3.957586 CCAGCCAGCCACACCTGA 61.958 66.667 0.00 0.00 34.77 3.86
1740 1801 2.670934 CAGCCAGCCACACCTGAC 60.671 66.667 0.00 0.00 34.77 3.51
1741 1802 3.170672 AGCCAGCCACACCTGACA 61.171 61.111 0.00 0.00 34.77 3.58
1742 1803 2.203337 GCCAGCCACACCTGACAA 60.203 61.111 0.00 0.00 34.77 3.18
1743 1804 2.263741 GCCAGCCACACCTGACAAG 61.264 63.158 0.00 0.00 34.77 3.16
1744 1805 1.149174 CCAGCCACACCTGACAAGT 59.851 57.895 0.00 0.00 34.77 3.16
1750 1812 2.099405 CCACACCTGACAAGTTTTGGT 58.901 47.619 0.00 0.00 34.12 3.67
1755 1817 3.925913 CACCTGACAAGTTTTGGTGTTTG 59.074 43.478 0.00 0.00 42.11 2.93
1759 1821 2.333014 ACAAGTTTTGGTGTTTGCACG 58.667 42.857 0.00 0.00 46.13 5.34
1764 1828 2.697431 TTTGGTGTTTGCACGATAGC 57.303 45.000 0.00 0.00 46.13 2.97
1766 1830 1.155889 TGGTGTTTGCACGATAGCTG 58.844 50.000 0.00 0.00 46.13 4.24
1779 1843 5.977725 GCACGATAGCTGATACTGTAAAAGA 59.022 40.000 0.00 0.00 42.67 2.52
1792 1856 4.709886 ACTGTAAAAGAAAAACCACTGGCT 59.290 37.500 0.00 0.00 0.00 4.75
1806 1870 2.423185 CACTGGCTGTTTGTGTCTTTCA 59.577 45.455 0.00 0.00 0.00 2.69
1809 1873 4.887071 ACTGGCTGTTTGTGTCTTTCATTA 59.113 37.500 0.00 0.00 0.00 1.90
1853 2042 9.042008 ACTACTATTAGTAATTTGTTGCATCCG 57.958 33.333 0.00 0.00 36.73 4.18
1927 2122 6.809196 TGAAAATTTCGTGGCATATTTGGTAC 59.191 34.615 0.97 0.00 0.00 3.34
1958 2154 6.326064 AGTCTGAATGCCTACTATCTTGTCAT 59.674 38.462 0.00 0.00 0.00 3.06
1970 2166 7.787725 ACTATCTTGTCATTCGATTTTACCC 57.212 36.000 0.00 0.00 0.00 3.69
1971 2167 6.766467 ACTATCTTGTCATTCGATTTTACCCC 59.234 38.462 0.00 0.00 0.00 4.95
1992 2188 2.213499 CCTCGGTCTCATATTTGCCAC 58.787 52.381 0.00 0.00 0.00 5.01
2027 2223 7.601886 GCATATACAGCTCTTCTTACACATGAT 59.398 37.037 0.00 0.00 0.00 2.45
2029 2225 4.764172 ACAGCTCTTCTTACACATGATCC 58.236 43.478 0.00 0.00 0.00 3.36
2034 2230 7.171167 CAGCTCTTCTTACACATGATCCTTATG 59.829 40.741 0.00 0.00 0.00 1.90
2302 2500 6.203338 CCCCAAAACTGAAACTTGATGAAATG 59.797 38.462 0.00 0.00 0.00 2.32
2324 2522 5.550290 TGACATGCTTGAAATACTGACAGA 58.450 37.500 10.08 0.00 0.00 3.41
2332 2530 4.072131 TGAAATACTGACAGAGCCAAACC 58.928 43.478 10.08 0.00 0.00 3.27
2335 2533 5.700402 AATACTGACAGAGCCAAACCTAT 57.300 39.130 10.08 0.00 0.00 2.57
2380 2578 1.352352 CTGGGAAAGACCACACCATCT 59.648 52.381 0.00 0.00 41.20 2.90
2382 2580 2.983192 TGGGAAAGACCACACCATCTTA 59.017 45.455 0.00 0.00 41.20 2.10
2424 2622 4.724074 TTACCGGTACAGATTCATCGTT 57.276 40.909 15.53 0.00 0.00 3.85
2502 2700 2.129823 TCGTGAACCTTCTTGACGTC 57.870 50.000 9.11 9.11 0.00 4.34
2520 2718 8.541133 TTGACGTCAATGTGAGTATTCATTTA 57.459 30.769 26.53 0.00 35.39 1.40
2523 2721 9.638300 GACGTCAATGTGAGTATTCATTTATTC 57.362 33.333 11.55 0.00 35.39 1.75
2545 2743 7.743116 TTCCTGATCTTACTTACCATTACCA 57.257 36.000 0.00 0.00 0.00 3.25
2546 2744 7.743116 TCCTGATCTTACTTACCATTACCAA 57.257 36.000 0.00 0.00 0.00 3.67
2547 2745 7.562135 TCCTGATCTTACTTACCATTACCAAC 58.438 38.462 0.00 0.00 0.00 3.77
2548 2746 6.766467 CCTGATCTTACTTACCATTACCAACC 59.234 42.308 0.00 0.00 0.00 3.77
2549 2747 7.260387 TGATCTTACTTACCATTACCAACCA 57.740 36.000 0.00 0.00 0.00 3.67
2550 2748 7.867921 TGATCTTACTTACCATTACCAACCAT 58.132 34.615 0.00 0.00 0.00 3.55
2551 2749 8.994500 TGATCTTACTTACCATTACCAACCATA 58.006 33.333 0.00 0.00 0.00 2.74
2558 2756 8.886369 ACTTACCATTACCAACCATATATAGCA 58.114 33.333 0.00 0.00 0.00 3.49
2559 2757 9.162764 CTTACCATTACCAACCATATATAGCAC 57.837 37.037 0.00 0.00 0.00 4.40
2560 2758 6.481643 ACCATTACCAACCATATATAGCACC 58.518 40.000 0.00 0.00 0.00 5.01
2561 2759 6.044989 ACCATTACCAACCATATATAGCACCA 59.955 38.462 0.00 0.00 0.00 4.17
2562 2760 7.118723 CCATTACCAACCATATATAGCACCAT 58.881 38.462 0.00 0.00 0.00 3.55
2563 2761 7.615365 CCATTACCAACCATATATAGCACCATT 59.385 37.037 0.00 0.00 0.00 3.16
2564 2762 8.677300 CATTACCAACCATATATAGCACCATTC 58.323 37.037 0.00 0.00 0.00 2.67
2565 2763 5.570320 ACCAACCATATATAGCACCATTCC 58.430 41.667 0.00 0.00 0.00 3.01
2566 2764 5.313240 ACCAACCATATATAGCACCATTCCT 59.687 40.000 0.00 0.00 0.00 3.36
2567 2765 5.649395 CCAACCATATATAGCACCATTCCTG 59.351 44.000 0.00 0.00 0.00 3.86
2568 2766 6.475504 CAACCATATATAGCACCATTCCTGA 58.524 40.000 0.00 0.00 0.00 3.86
2569 2767 6.054860 ACCATATATAGCACCATTCCTGAC 57.945 41.667 0.00 0.00 0.00 3.51
2584 2782 3.506398 TCCTGACACTGATCAAGGTGTA 58.494 45.455 17.85 3.27 45.17 2.90
2626 2824 4.581409 TCATTTGATCATCGGTGATGCAAT 59.419 37.500 17.68 10.70 44.96 3.56
2922 3120 1.902556 CCGGTTCCGGTCCAAGTAT 59.097 57.895 20.65 0.00 43.86 2.12
2982 3180 1.950973 TACCGTAGCGCATGAAGCCA 61.951 55.000 11.47 0.00 41.38 4.75
2983 3181 2.528743 CCGTAGCGCATGAAGCCAG 61.529 63.158 11.47 2.85 41.38 4.85
3007 3205 2.492090 CGAACAGGAGCGAGAGGG 59.508 66.667 0.00 0.00 0.00 4.30
3032 3230 2.125552 CCTTCATGTCTGCGCCGA 60.126 61.111 4.18 0.00 0.00 5.54
3115 3315 0.992802 GTCGAGATGACTGGTTTCGC 59.007 55.000 0.00 0.00 44.58 4.70
3162 3363 3.308053 CACAAGATTATGGAGCGTGTCAG 59.692 47.826 0.00 0.00 34.13 3.51
3165 3366 2.497675 AGATTATGGAGCGTGTCAGTGT 59.502 45.455 0.00 0.00 0.00 3.55
3166 3367 2.078849 TTATGGAGCGTGTCAGTGTG 57.921 50.000 0.00 0.00 0.00 3.82
3171 3372 1.645034 GAGCGTGTCAGTGTGCATAT 58.355 50.000 0.00 0.00 0.00 1.78
3177 3378 1.003464 TGTCAGTGTGCATATGCCTGT 59.997 47.619 24.54 4.26 41.18 4.00
3181 3382 4.155826 GTCAGTGTGCATATGCCTGTTTTA 59.844 41.667 24.54 6.39 41.18 1.52
3195 3397 3.066203 CCTGTTTTAACGGTGCTCAACTT 59.934 43.478 1.15 0.00 33.38 2.66
3196 3398 4.022464 TGTTTTAACGGTGCTCAACTTG 57.978 40.909 0.00 0.00 0.00 3.16
3197 3399 2.766970 TTTAACGGTGCTCAACTTGC 57.233 45.000 0.00 0.00 0.00 4.01
3198 3400 1.961793 TTAACGGTGCTCAACTTGCT 58.038 45.000 0.00 0.00 0.00 3.91
3199 3401 1.508632 TAACGGTGCTCAACTTGCTC 58.491 50.000 0.00 0.00 0.00 4.26
3200 3402 1.166531 AACGGTGCTCAACTTGCTCC 61.167 55.000 0.00 0.00 39.76 4.70
3201 3403 2.328099 CGGTGCTCAACTTGCTCCC 61.328 63.158 0.00 0.00 39.95 4.30
3210 3412 4.301628 CTCAACTTGCTCCCAACAAAATC 58.698 43.478 0.00 0.00 0.00 2.17
3212 3414 2.306847 ACTTGCTCCCAACAAAATCGT 58.693 42.857 0.00 0.00 0.00 3.73
3222 3426 4.987912 CCCAACAAAATCGTTGCTGTTTAT 59.012 37.500 0.00 0.00 44.01 1.40
3226 3430 8.707839 CCAACAAAATCGTTGCTGTTTATAATT 58.292 29.630 0.00 0.00 44.01 1.40
3227 3431 9.514822 CAACAAAATCGTTGCTGTTTATAATTG 57.485 29.630 0.00 0.00 39.82 2.32
3228 3432 7.728895 ACAAAATCGTTGCTGTTTATAATTGC 58.271 30.769 0.00 0.00 0.00 3.56
3229 3433 7.598493 ACAAAATCGTTGCTGTTTATAATTGCT 59.402 29.630 0.00 0.00 0.00 3.91
3232 3436 6.358118 TCGTTGCTGTTTATAATTGCTAGG 57.642 37.500 0.00 5.26 0.00 3.02
3235 3439 7.282224 TCGTTGCTGTTTATAATTGCTAGGAAT 59.718 33.333 3.24 3.24 0.00 3.01
3236 3440 7.915397 CGTTGCTGTTTATAATTGCTAGGAATT 59.085 33.333 23.42 23.42 0.00 2.17
3281 3500 8.873186 AGAAAAACTTAAATAAAGGGGATCGA 57.127 30.769 0.00 0.00 39.73 3.59
3287 3506 4.855298 AAATAAAGGGGATCGACTTCCA 57.145 40.909 7.35 0.00 37.53 3.53
3292 3511 2.506472 GGATCGACTTCCAGGGCC 59.494 66.667 0.00 0.00 35.72 5.80
3295 3514 1.120530 GATCGACTTCCAGGGCCTAA 58.879 55.000 5.28 0.00 0.00 2.69
3304 3523 2.502745 TCCAGGGCCTAATGGAAAGAT 58.497 47.619 18.74 0.00 42.61 2.40
3305 3524 2.858768 TCCAGGGCCTAATGGAAAGATT 59.141 45.455 18.74 0.00 42.61 2.40
3312 3531 4.464947 GCCTAATGGAAAGATTGTAGCCT 58.535 43.478 0.00 0.00 34.57 4.58
3313 3532 4.276926 GCCTAATGGAAAGATTGTAGCCTG 59.723 45.833 0.00 0.00 34.57 4.85
3314 3533 5.684704 CCTAATGGAAAGATTGTAGCCTGA 58.315 41.667 0.00 0.00 34.57 3.86
3361 3580 3.583882 AAATGGCCCACGGTCCTGG 62.584 63.158 0.00 0.00 0.00 4.45
3372 3591 3.224324 GTCCTGGCGAGCCCGATA 61.224 66.667 12.05 0.00 38.22 2.92
3373 3592 2.443203 TCCTGGCGAGCCCGATAA 60.443 61.111 12.05 0.00 38.22 1.75
3374 3593 2.029666 CCTGGCGAGCCCGATAAG 59.970 66.667 12.05 1.55 38.22 1.73
3375 3594 2.663188 CTGGCGAGCCCGATAAGC 60.663 66.667 12.05 0.00 38.22 3.09
3376 3595 4.585526 TGGCGAGCCCGATAAGCG 62.586 66.667 12.05 0.00 38.22 4.68
3399 3618 0.402121 ACCTGAAAAGCTGGAGGACC 59.598 55.000 7.41 0.00 38.83 4.46
3402 3621 0.034896 TGAAAAGCTGGAGGACCGAC 59.965 55.000 0.00 0.00 39.42 4.79
3411 3630 1.737008 GAGGACCGACTGGCGAAAC 60.737 63.158 3.46 0.00 44.57 2.78
3414 3633 1.300697 GACCGACTGGCGAAACTGT 60.301 57.895 3.46 0.00 44.57 3.55
3458 3677 2.115510 GGGCATTCCCGTCATTTCC 58.884 57.895 0.00 0.00 43.94 3.13
3618 3838 5.221145 CCTGGTAGAGCATGATCCGTATATC 60.221 48.000 7.49 0.00 0.00 1.63
3620 3840 5.952347 TGGTAGAGCATGATCCGTATATCTT 59.048 40.000 7.49 0.00 0.00 2.40
3628 3848 9.725019 AGCATGATCCGTATATCTTCAAATTTA 57.275 29.630 0.00 0.00 0.00 1.40
3634 3854 9.793259 ATCCGTATATCTTCAAATTTACATGGT 57.207 29.630 0.00 0.00 0.00 3.55
3653 3884 8.017587 ACATGGTTTTATCATTTTCTTTTCGC 57.982 30.769 0.00 0.00 0.00 4.70
3656 3887 8.600449 TGGTTTTATCATTTTCTTTTCGCATT 57.400 26.923 0.00 0.00 0.00 3.56
3704 3937 2.423538 CTCGTTTTGTGGGGATTGATCC 59.576 50.000 1.21 1.21 46.41 3.36
3717 3950 3.876914 GGATTGATCCGCTATGTTGTTCA 59.123 43.478 0.00 0.00 37.19 3.18
3722 3955 5.670485 TGATCCGCTATGTTGTTCACTATT 58.330 37.500 0.00 0.00 0.00 1.73
3723 3956 5.753438 TGATCCGCTATGTTGTTCACTATTC 59.247 40.000 0.00 0.00 0.00 1.75
3727 3960 5.445939 CCGCTATGTTGTTCACTATTCACAC 60.446 44.000 0.00 0.00 0.00 3.82
3734 3967 7.995289 TGTTGTTCACTATTCACACTTTTCAT 58.005 30.769 0.00 0.00 0.00 2.57
3748 3981 8.544622 TCACACTTTTCATAAGGTATACCATGA 58.455 33.333 23.87 20.02 38.89 3.07
3751 3984 9.396022 CACTTTTCATAAGGTATACCATGAAGT 57.604 33.333 25.27 20.91 38.69 3.01
3754 3987 7.801716 TTCATAAGGTATACCATGAAGTTGC 57.198 36.000 23.95 0.00 35.06 4.17
3756 3989 6.765989 TCATAAGGTATACCATGAAGTTGCAC 59.234 38.462 23.87 0.00 38.89 4.57
3762 3995 8.605947 AGGTATACCATGAAGTTGCACATATAT 58.394 33.333 23.87 0.00 38.89 0.86
3767 4000 7.483307 ACCATGAAGTTGCACATATATTTGTC 58.517 34.615 0.00 0.00 0.00 3.18
3770 4003 7.320443 TGAAGTTGCACATATATTTGTCCTC 57.680 36.000 1.05 0.00 0.00 3.71
3778 4012 8.439971 TGCACATATATTTGTCCTCTTATCCTT 58.560 33.333 1.05 0.00 0.00 3.36
3779 4013 9.289782 GCACATATATTTGTCCTCTTATCCTTT 57.710 33.333 1.05 0.00 0.00 3.11
3781 4015 9.289782 ACATATATTTGTCCTCTTATCCTTTGC 57.710 33.333 0.00 0.00 0.00 3.68
3815 4049 7.121315 AGGACACCTTTGAATACATTTCTAAGC 59.879 37.037 4.65 0.00 32.53 3.09
3824 4058 9.921637 TTGAATACATTTCTAAGCGGAATTTTT 57.078 25.926 0.00 0.00 0.00 1.94
3840 4074 6.086371 CGGAATTTTTGAAGACTTTTAGACGC 59.914 38.462 0.00 0.00 0.00 5.19
3845 4079 3.708890 TGAAGACTTTTAGACGCGTGAA 58.291 40.909 20.70 7.98 0.00 3.18
3847 4081 4.208460 TGAAGACTTTTAGACGCGTGAAAG 59.792 41.667 20.70 24.02 35.72 2.62
3848 4082 2.475487 AGACTTTTAGACGCGTGAAAGC 59.525 45.455 26.30 21.06 33.53 3.51
3849 4083 2.206750 ACTTTTAGACGCGTGAAAGCA 58.793 42.857 26.30 11.18 36.85 3.91
3850 4084 2.610374 ACTTTTAGACGCGTGAAAGCAA 59.390 40.909 26.30 11.05 36.85 3.91
3851 4085 2.656192 TTTAGACGCGTGAAAGCAAC 57.344 45.000 20.70 0.00 36.85 4.17
3852 4086 0.863144 TTAGACGCGTGAAAGCAACC 59.137 50.000 20.70 0.00 36.85 3.77
3853 4087 0.032952 TAGACGCGTGAAAGCAACCT 59.967 50.000 20.70 6.50 36.85 3.50
3854 4088 1.082756 GACGCGTGAAAGCAACCTG 60.083 57.895 20.70 0.00 36.85 4.00
3855 4089 2.252260 CGCGTGAAAGCAACCTGG 59.748 61.111 0.00 0.00 36.85 4.45
3856 4090 2.250939 CGCGTGAAAGCAACCTGGA 61.251 57.895 0.00 0.00 36.85 3.86
3857 4091 1.781025 CGCGTGAAAGCAACCTGGAA 61.781 55.000 0.00 0.00 36.85 3.53
3858 4092 0.040067 GCGTGAAAGCAACCTGGAAG 60.040 55.000 0.00 0.00 37.05 3.46
3876 4110 4.402056 GAAGGATTCCATAGACCGTCAA 57.598 45.455 5.29 0.00 39.83 3.18
3877 4111 4.372656 GAAGGATTCCATAGACCGTCAAG 58.627 47.826 5.29 0.00 39.83 3.02
3878 4112 4.740934 GAAGGATTCCATAGACCGTCAAGG 60.741 50.000 5.29 0.00 42.55 3.61
3879 4113 2.224305 GGATTCCATAGACCGTCAAGGG 60.224 54.545 0.40 0.00 46.96 3.95
3880 4114 2.241281 TTCCATAGACCGTCAAGGGA 57.759 50.000 0.40 1.38 46.96 4.20
3881 4115 2.241281 TCCATAGACCGTCAAGGGAA 57.759 50.000 0.40 0.00 46.96 3.97
3882 4116 2.542550 TCCATAGACCGTCAAGGGAAA 58.457 47.619 0.40 0.00 46.96 3.13
3883 4117 3.112263 TCCATAGACCGTCAAGGGAAAT 58.888 45.455 0.40 0.00 46.96 2.17
3884 4118 4.291792 TCCATAGACCGTCAAGGGAAATA 58.708 43.478 0.40 0.00 46.96 1.40
3885 4119 4.100498 TCCATAGACCGTCAAGGGAAATAC 59.900 45.833 0.40 0.00 46.96 1.89
3886 4120 4.101119 CCATAGACCGTCAAGGGAAATACT 59.899 45.833 0.40 0.00 46.96 2.12
3887 4121 3.611766 AGACCGTCAAGGGAAATACTG 57.388 47.619 0.40 0.00 46.96 2.74
3888 4122 2.904434 AGACCGTCAAGGGAAATACTGT 59.096 45.455 0.40 0.00 46.96 3.55
3889 4123 3.000727 GACCGTCAAGGGAAATACTGTG 58.999 50.000 0.00 0.00 46.96 3.66
3890 4124 2.370849 ACCGTCAAGGGAAATACTGTGT 59.629 45.455 0.00 0.00 46.96 3.72
3891 4125 3.579586 ACCGTCAAGGGAAATACTGTGTA 59.420 43.478 0.00 0.00 46.96 2.90
3892 4126 4.181578 CCGTCAAGGGAAATACTGTGTAG 58.818 47.826 0.00 0.00 35.97 2.74
3893 4127 4.081862 CCGTCAAGGGAAATACTGTGTAGA 60.082 45.833 0.00 0.00 35.97 2.59
3894 4128 5.475719 CGTCAAGGGAAATACTGTGTAGAA 58.524 41.667 0.00 0.00 0.00 2.10
3895 4129 5.929992 CGTCAAGGGAAATACTGTGTAGAAA 59.070 40.000 0.00 0.00 0.00 2.52
3896 4130 6.128634 CGTCAAGGGAAATACTGTGTAGAAAC 60.129 42.308 0.00 0.00 0.00 2.78
3897 4131 6.148976 GTCAAGGGAAATACTGTGTAGAAACC 59.851 42.308 0.00 0.00 0.00 3.27
3898 4132 4.828829 AGGGAAATACTGTGTAGAAACCG 58.171 43.478 0.00 0.00 0.00 4.44
3899 4133 3.373130 GGGAAATACTGTGTAGAAACCGC 59.627 47.826 0.00 0.00 0.00 5.68
3900 4134 3.061697 GGAAATACTGTGTAGAAACCGCG 59.938 47.826 0.00 0.00 0.00 6.46
3901 4135 3.308438 AATACTGTGTAGAAACCGCGT 57.692 42.857 4.92 0.00 0.00 6.01
3902 4136 4.439305 AATACTGTGTAGAAACCGCGTA 57.561 40.909 4.92 0.00 0.00 4.42
3903 4137 4.644103 ATACTGTGTAGAAACCGCGTAT 57.356 40.909 4.92 0.00 0.00 3.06
3904 4138 3.308438 ACTGTGTAGAAACCGCGTATT 57.692 42.857 4.92 0.00 0.00 1.89
3905 4139 3.656559 ACTGTGTAGAAACCGCGTATTT 58.343 40.909 4.92 5.19 0.00 1.40
3906 4140 3.430895 ACTGTGTAGAAACCGCGTATTTG 59.569 43.478 4.92 0.00 0.00 2.32
3907 4141 3.391965 TGTGTAGAAACCGCGTATTTGT 58.608 40.909 4.92 6.67 0.00 2.83
3908 4142 3.808726 TGTGTAGAAACCGCGTATTTGTT 59.191 39.130 4.92 0.00 0.00 2.83
3909 4143 4.272991 TGTGTAGAAACCGCGTATTTGTTT 59.727 37.500 4.92 7.81 35.06 2.83
3910 4144 4.842376 GTGTAGAAACCGCGTATTTGTTTC 59.158 41.667 22.32 22.32 45.08 2.78
3911 4145 3.547649 AGAAACCGCGTATTTGTTTCC 57.452 42.857 24.60 13.12 45.58 3.13
3912 4146 2.879646 AGAAACCGCGTATTTGTTTCCA 59.120 40.909 24.60 0.00 45.58 3.53
3913 4147 2.691984 AACCGCGTATTTGTTTCCAC 57.308 45.000 4.92 0.00 0.00 4.02
3914 4148 1.595466 ACCGCGTATTTGTTTCCACA 58.405 45.000 4.92 0.00 0.00 4.17
3915 4149 1.948145 ACCGCGTATTTGTTTCCACAA 59.052 42.857 4.92 0.00 41.39 3.33
3946 4180 9.929180 ATACTATGCTATTACGTCAATCATTGT 57.071 29.630 0.00 1.02 0.00 2.71
3947 4181 8.299262 ACTATGCTATTACGTCAATCATTGTC 57.701 34.615 0.00 0.00 0.00 3.18
3948 4182 5.984233 TGCTATTACGTCAATCATTGTCC 57.016 39.130 0.00 0.00 0.00 4.02
3949 4183 5.670485 TGCTATTACGTCAATCATTGTCCT 58.330 37.500 0.00 0.00 0.00 3.85
3950 4184 5.753438 TGCTATTACGTCAATCATTGTCCTC 59.247 40.000 0.00 0.00 0.00 3.71
3951 4185 5.107837 GCTATTACGTCAATCATTGTCCTCG 60.108 44.000 0.00 2.07 0.00 4.63
3952 4186 2.743636 ACGTCAATCATTGTCCTCGT 57.256 45.000 0.00 2.65 0.00 4.18
3953 4187 2.337583 ACGTCAATCATTGTCCTCGTG 58.662 47.619 0.00 0.00 0.00 4.35
3954 4188 2.288825 ACGTCAATCATTGTCCTCGTGT 60.289 45.455 0.00 0.00 0.00 4.49
3955 4189 2.345641 CGTCAATCATTGTCCTCGTGTC 59.654 50.000 0.00 0.00 0.00 3.67
3956 4190 3.325870 GTCAATCATTGTCCTCGTGTCA 58.674 45.455 0.00 0.00 0.00 3.58
3957 4191 3.935203 GTCAATCATTGTCCTCGTGTCAT 59.065 43.478 0.00 0.00 0.00 3.06
3958 4192 3.934579 TCAATCATTGTCCTCGTGTCATG 59.065 43.478 0.00 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.968462 TAGGGAAGGGGAGGGGGTG 61.968 68.421 0.00 0.00 0.00 4.61
1 2 2.545293 TAGGGAAGGGGAGGGGGT 60.545 66.667 0.00 0.00 0.00 4.95
2 3 2.039724 GTAGGGAAGGGGAGGGGG 60.040 72.222 0.00 0.00 0.00 5.40
3 4 2.039724 GGTAGGGAAGGGGAGGGG 60.040 72.222 0.00 0.00 0.00 4.79
4 5 1.062488 CATGGTAGGGAAGGGGAGGG 61.062 65.000 0.00 0.00 0.00 4.30
5 6 0.030092 TCATGGTAGGGAAGGGGAGG 60.030 60.000 0.00 0.00 0.00 4.30
6 7 1.490910 GTTCATGGTAGGGAAGGGGAG 59.509 57.143 0.00 0.00 0.00 4.30
7 8 1.591768 GTTCATGGTAGGGAAGGGGA 58.408 55.000 0.00 0.00 0.00 4.81
8 9 0.551396 GGTTCATGGTAGGGAAGGGG 59.449 60.000 0.00 0.00 0.00 4.79
9 10 1.064685 GTGGTTCATGGTAGGGAAGGG 60.065 57.143 0.00 0.00 0.00 3.95
10 11 1.064685 GGTGGTTCATGGTAGGGAAGG 60.065 57.143 0.00 0.00 0.00 3.46
11 12 1.064685 GGGTGGTTCATGGTAGGGAAG 60.065 57.143 0.00 0.00 0.00 3.46
12 13 0.996583 GGGTGGTTCATGGTAGGGAA 59.003 55.000 0.00 0.00 0.00 3.97
13 14 1.268992 CGGGTGGTTCATGGTAGGGA 61.269 60.000 0.00 0.00 0.00 4.20
14 15 1.223487 CGGGTGGTTCATGGTAGGG 59.777 63.158 0.00 0.00 0.00 3.53
15 16 0.392461 CACGGGTGGTTCATGGTAGG 60.392 60.000 0.00 0.00 0.00 3.18
16 17 0.611200 TCACGGGTGGTTCATGGTAG 59.389 55.000 0.00 0.00 0.00 3.18
17 18 0.611200 CTCACGGGTGGTTCATGGTA 59.389 55.000 0.00 0.00 0.00 3.25
18 19 1.374947 CTCACGGGTGGTTCATGGT 59.625 57.895 0.00 0.00 0.00 3.55
19 20 2.040544 GCTCACGGGTGGTTCATGG 61.041 63.158 0.00 0.00 0.00 3.66
20 21 1.300971 CTGCTCACGGGTGGTTCATG 61.301 60.000 0.00 0.00 0.00 3.07
21 22 1.003355 CTGCTCACGGGTGGTTCAT 60.003 57.895 0.00 0.00 0.00 2.57
22 23 1.978455 AACTGCTCACGGGTGGTTCA 61.978 55.000 0.00 0.00 0.00 3.18
23 24 1.227853 AACTGCTCACGGGTGGTTC 60.228 57.895 0.00 0.00 0.00 3.62
24 25 1.525995 CAACTGCTCACGGGTGGTT 60.526 57.895 0.00 0.00 36.11 3.67
25 26 2.111043 CAACTGCTCACGGGTGGT 59.889 61.111 0.00 0.00 36.11 4.16
26 27 3.357079 GCAACTGCTCACGGGTGG 61.357 66.667 0.00 0.00 40.52 4.61
27 28 3.357079 GGCAACTGCTCACGGGTG 61.357 66.667 1.06 0.00 43.29 4.61
54 55 3.499737 GTGGCCGCAATCTCACCG 61.500 66.667 12.58 0.00 0.00 4.94
94 98 2.421314 GGGGTGTTGTTTGCAGGC 59.579 61.111 0.00 0.00 0.00 4.85
97 101 1.456705 GGAGGGGGTGTTGTTTGCA 60.457 57.895 0.00 0.00 0.00 4.08
105 109 4.779486 GGGGATGGGAGGGGGTGT 62.779 72.222 0.00 0.00 0.00 4.16
125 129 2.510691 CGCGATAGGGCCACGTTT 60.511 61.111 6.18 0.00 44.01 3.60
139 143 3.394874 CGGACGATATGGTGCGCG 61.395 66.667 17.78 0.00 44.40 6.86
162 166 2.292267 AGTCATGGCAAAGGAATAGCG 58.708 47.619 0.00 0.00 0.00 4.26
167 171 2.297033 GCTTCAAGTCATGGCAAAGGAA 59.703 45.455 0.00 0.00 0.00 3.36
173 177 0.674581 CGGAGCTTCAAGTCATGGCA 60.675 55.000 0.00 0.00 0.00 4.92
183 187 1.351017 AGTCAAAATCCCGGAGCTTCA 59.649 47.619 0.73 0.00 0.00 3.02
190 194 1.173913 GGGAACAGTCAAAATCCCGG 58.826 55.000 0.00 0.00 41.99 5.73
195 199 3.230976 GAACAGGGGGAACAGTCAAAAT 58.769 45.455 0.00 0.00 0.00 1.82
198 202 1.217916 TGAACAGGGGGAACAGTCAA 58.782 50.000 0.00 0.00 0.00 3.18
199 203 1.351017 GATGAACAGGGGGAACAGTCA 59.649 52.381 0.00 0.00 0.00 3.41
200 204 1.676014 CGATGAACAGGGGGAACAGTC 60.676 57.143 0.00 0.00 0.00 3.51
201 205 0.324943 CGATGAACAGGGGGAACAGT 59.675 55.000 0.00 0.00 0.00 3.55
202 206 0.613260 TCGATGAACAGGGGGAACAG 59.387 55.000 0.00 0.00 0.00 3.16
203 207 1.065491 CATCGATGAACAGGGGGAACA 60.065 52.381 21.02 0.00 0.00 3.18
204 208 1.668419 CATCGATGAACAGGGGGAAC 58.332 55.000 21.02 0.00 0.00 3.62
205 209 0.546122 CCATCGATGAACAGGGGGAA 59.454 55.000 26.86 0.00 0.00 3.97
206 210 0.326143 TCCATCGATGAACAGGGGGA 60.326 55.000 26.86 9.80 0.00 4.81
207 211 0.179045 GTCCATCGATGAACAGGGGG 60.179 60.000 26.86 7.39 0.00 5.40
208 212 0.530650 CGTCCATCGATGAACAGGGG 60.531 60.000 26.86 8.17 42.86 4.79
209 213 0.459899 TCGTCCATCGATGAACAGGG 59.540 55.000 26.86 8.94 44.01 4.45
256 260 1.135689 CGGTACCTTCTTGCAACATGC 60.136 52.381 10.90 0.00 45.29 4.06
261 265 2.301870 AGATCACGGTACCTTCTTGCAA 59.698 45.455 10.90 0.00 0.00 4.08
263 267 2.674796 AGATCACGGTACCTTCTTGC 57.325 50.000 10.90 0.00 0.00 4.01
272 276 4.128925 ACACGACTAGTAGATCACGGTA 57.871 45.455 10.22 0.00 0.00 4.02
284 288 2.800544 CAACCTCACCAAACACGACTAG 59.199 50.000 0.00 0.00 0.00 2.57
286 290 1.663695 CAACCTCACCAAACACGACT 58.336 50.000 0.00 0.00 0.00 4.18
289 293 0.738389 AAGCAACCTCACCAAACACG 59.262 50.000 0.00 0.00 0.00 4.49
292 296 1.570813 GCAAAGCAACCTCACCAAAC 58.429 50.000 0.00 0.00 0.00 2.93
295 299 1.832167 GGGCAAAGCAACCTCACCA 60.832 57.895 0.00 0.00 0.00 4.17
303 307 2.633967 ACAATTGATCTGGGCAAAGCAA 59.366 40.909 13.59 0.00 0.00 3.91
313 317 7.215085 TCCTCATCAGATGTACAATTGATCTG 58.785 38.462 21.37 21.37 43.01 2.90
316 320 6.430308 GCATCCTCATCAGATGTACAATTGAT 59.570 38.462 13.59 15.79 42.58 2.57
317 321 5.761726 GCATCCTCATCAGATGTACAATTGA 59.238 40.000 13.59 13.14 42.58 2.57
318 322 5.763698 AGCATCCTCATCAGATGTACAATTG 59.236 40.000 10.34 3.24 42.58 2.32
319 323 5.938279 AGCATCCTCATCAGATGTACAATT 58.062 37.500 10.34 0.00 42.58 2.32
320 324 5.563876 AGCATCCTCATCAGATGTACAAT 57.436 39.130 10.34 0.00 42.58 2.71
321 325 5.363101 GAAGCATCCTCATCAGATGTACAA 58.637 41.667 10.34 0.00 42.58 2.41
322 326 4.202295 GGAAGCATCCTCATCAGATGTACA 60.202 45.833 10.34 0.00 42.58 2.90
323 327 4.314121 GGAAGCATCCTCATCAGATGTAC 58.686 47.826 10.34 0.00 42.58 2.90
324 328 3.006217 CGGAAGCATCCTCATCAGATGTA 59.994 47.826 10.34 0.00 44.17 2.29
325 329 2.224233 CGGAAGCATCCTCATCAGATGT 60.224 50.000 10.34 0.00 44.17 3.06
326 330 2.036862 TCGGAAGCATCCTCATCAGATG 59.963 50.000 6.39 3.71 44.17 2.90
332 336 1.408822 GGGTTTCGGAAGCATCCTCAT 60.409 52.381 8.12 0.00 44.17 2.90
335 339 1.486726 CTAGGGTTTCGGAAGCATCCT 59.513 52.381 8.12 7.17 44.17 3.24
345 349 5.302313 AGAGAATTAGGTAGCTAGGGTTTCG 59.698 44.000 1.31 0.00 0.00 3.46
356 360 6.561737 TGCTCGTATGAGAGAATTAGGTAG 57.438 41.667 16.39 0.00 45.57 3.18
357 361 8.678199 CATATGCTCGTATGAGAGAATTAGGTA 58.322 37.037 16.39 0.00 45.57 3.08
378 382 1.013596 TTTCCCGCGAGCAACATATG 58.986 50.000 8.23 0.00 0.00 1.78
379 383 1.670811 CTTTTCCCGCGAGCAACATAT 59.329 47.619 8.23 0.00 0.00 1.78
391 395 1.530720 GTTGCAAAATGCCTTTTCCCG 59.469 47.619 0.00 0.00 44.23 5.14
424 429 2.871096 TTGGGGTTTACCTGCTACAG 57.129 50.000 0.00 0.00 40.03 2.74
425 430 3.596940 TTTTGGGGTTTACCTGCTACA 57.403 42.857 0.00 0.00 40.03 2.74
504 514 3.189285 AGTTGATGCACAAGTGTTTTGC 58.811 40.909 8.09 0.00 40.21 3.68
522 539 3.244215 TGCAAATCAGAGAGACCGAAGTT 60.244 43.478 0.00 0.00 0.00 2.66
527 544 2.897436 TGATGCAAATCAGAGAGACCG 58.103 47.619 0.00 0.00 0.00 4.79
538 555 1.481772 CCCGTGGGAAATGATGCAAAT 59.518 47.619 0.00 0.00 37.50 2.32
552 569 0.937304 CATAAGCAATCGTCCCGTGG 59.063 55.000 0.00 0.00 0.00 4.94
623 642 3.297134 AACAGGAGGCTGTCTCAAAAA 57.703 42.857 11.90 0.00 44.19 1.94
624 643 3.297134 AAACAGGAGGCTGTCTCAAAA 57.703 42.857 11.90 0.00 44.19 2.44
625 644 3.297134 AAAACAGGAGGCTGTCTCAAA 57.703 42.857 11.90 0.00 44.19 2.69
626 645 3.297134 AAAAACAGGAGGCTGTCTCAA 57.703 42.857 11.90 0.00 44.19 3.02
645 664 0.110238 GCTGTCGATGCTCGCAAAAA 60.110 50.000 0.00 0.00 40.21 1.94
646 665 1.497278 GCTGTCGATGCTCGCAAAA 59.503 52.632 0.00 0.00 40.21 2.44
647 666 2.390599 GGCTGTCGATGCTCGCAAA 61.391 57.895 12.00 0.00 40.21 3.68
648 667 1.944234 TAGGCTGTCGATGCTCGCAA 61.944 55.000 12.00 0.00 40.21 4.85
649 668 1.738346 ATAGGCTGTCGATGCTCGCA 61.738 55.000 12.00 0.00 40.21 5.10
650 669 0.598680 AATAGGCTGTCGATGCTCGC 60.599 55.000 12.00 0.65 40.21 5.03
651 670 1.858091 AAATAGGCTGTCGATGCTCG 58.142 50.000 12.00 0.00 42.10 5.03
652 671 3.198068 TCAAAATAGGCTGTCGATGCTC 58.802 45.455 12.00 4.28 0.00 4.26
653 672 3.118629 TCTCAAAATAGGCTGTCGATGCT 60.119 43.478 12.00 3.12 0.00 3.79
654 673 3.198068 TCTCAAAATAGGCTGTCGATGC 58.802 45.455 0.00 5.01 0.00 3.91
655 674 5.998454 ATTCTCAAAATAGGCTGTCGATG 57.002 39.130 0.00 0.00 0.00 3.84
656 675 7.225538 CAGTAATTCTCAAAATAGGCTGTCGAT 59.774 37.037 0.00 0.00 0.00 3.59
657 676 6.535150 CAGTAATTCTCAAAATAGGCTGTCGA 59.465 38.462 0.00 0.00 0.00 4.20
658 677 6.313905 ACAGTAATTCTCAAAATAGGCTGTCG 59.686 38.462 0.00 0.00 0.00 4.35
659 678 7.617041 ACAGTAATTCTCAAAATAGGCTGTC 57.383 36.000 0.00 0.00 0.00 3.51
660 679 8.409358 AAACAGTAATTCTCAAAATAGGCTGT 57.591 30.769 0.00 0.00 35.35 4.40
661 680 9.696917 AAAAACAGTAATTCTCAAAATAGGCTG 57.303 29.630 0.00 0.00 0.00 4.85
685 704 6.261381 ACAACAGTAATTCTCGCCACTAAAAA 59.739 34.615 0.00 0.00 0.00 1.94
686 705 5.761234 ACAACAGTAATTCTCGCCACTAAAA 59.239 36.000 0.00 0.00 0.00 1.52
687 706 5.302360 ACAACAGTAATTCTCGCCACTAAA 58.698 37.500 0.00 0.00 0.00 1.85
688 707 4.890088 ACAACAGTAATTCTCGCCACTAA 58.110 39.130 0.00 0.00 0.00 2.24
689 708 4.530710 ACAACAGTAATTCTCGCCACTA 57.469 40.909 0.00 0.00 0.00 2.74
690 709 3.402628 ACAACAGTAATTCTCGCCACT 57.597 42.857 0.00 0.00 0.00 4.00
691 710 3.496884 TCAACAACAGTAATTCTCGCCAC 59.503 43.478 0.00 0.00 0.00 5.01
692 711 3.734463 TCAACAACAGTAATTCTCGCCA 58.266 40.909 0.00 0.00 0.00 5.69
693 712 4.437390 CCATCAACAACAGTAATTCTCGCC 60.437 45.833 0.00 0.00 0.00 5.54
694 713 4.391830 TCCATCAACAACAGTAATTCTCGC 59.608 41.667 0.00 0.00 0.00 5.03
695 714 5.446473 GCTCCATCAACAACAGTAATTCTCG 60.446 44.000 0.00 0.00 0.00 4.04
696 715 5.412594 TGCTCCATCAACAACAGTAATTCTC 59.587 40.000 0.00 0.00 0.00 2.87
697 716 5.182001 GTGCTCCATCAACAACAGTAATTCT 59.818 40.000 0.00 0.00 0.00 2.40
698 717 5.393962 GTGCTCCATCAACAACAGTAATTC 58.606 41.667 0.00 0.00 0.00 2.17
699 718 4.083324 CGTGCTCCATCAACAACAGTAATT 60.083 41.667 0.00 0.00 0.00 1.40
700 719 3.436704 CGTGCTCCATCAACAACAGTAAT 59.563 43.478 0.00 0.00 0.00 1.89
701 720 2.805671 CGTGCTCCATCAACAACAGTAA 59.194 45.455 0.00 0.00 0.00 2.24
702 721 2.412870 CGTGCTCCATCAACAACAGTA 58.587 47.619 0.00 0.00 0.00 2.74
703 722 1.229428 CGTGCTCCATCAACAACAGT 58.771 50.000 0.00 0.00 0.00 3.55
704 723 0.518636 CCGTGCTCCATCAACAACAG 59.481 55.000 0.00 0.00 0.00 3.16
705 724 0.888736 CCCGTGCTCCATCAACAACA 60.889 55.000 0.00 0.00 0.00 3.33
706 725 0.605319 TCCCGTGCTCCATCAACAAC 60.605 55.000 0.00 0.00 0.00 3.32
707 726 0.109532 TTCCCGTGCTCCATCAACAA 59.890 50.000 0.00 0.00 0.00 2.83
708 727 0.109532 TTTCCCGTGCTCCATCAACA 59.890 50.000 0.00 0.00 0.00 3.33
709 728 0.521735 GTTTCCCGTGCTCCATCAAC 59.478 55.000 0.00 0.00 0.00 3.18
710 729 0.400213 AGTTTCCCGTGCTCCATCAA 59.600 50.000 0.00 0.00 0.00 2.57
711 730 1.271856 TAGTTTCCCGTGCTCCATCA 58.728 50.000 0.00 0.00 0.00 3.07
720 739 1.212250 AGGGCCCATTAGTTTCCCGT 61.212 55.000 27.56 0.00 41.76 5.28
721 740 0.751643 CAGGGCCCATTAGTTTCCCG 60.752 60.000 27.56 0.00 41.76 5.14
789 815 3.621805 GGGTTTGTTTGCCCGGGG 61.622 66.667 25.28 9.31 34.90 5.73
798 824 1.453015 TGCTGCGACTGGGTTTGTT 60.453 52.632 0.00 0.00 0.00 2.83
951 992 0.829990 GGGCAGAGGAGGAGAGAAAG 59.170 60.000 0.00 0.00 0.00 2.62
1233 1285 8.544597 TGGATTTGATTGAATTACGTACGTATG 58.455 33.333 27.30 13.27 0.00 2.39
1235 1287 8.651391 ATGGATTTGATTGAATTACGTACGTA 57.349 30.769 23.60 23.60 0.00 3.57
1238 1290 7.228706 AGGGATGGATTTGATTGAATTACGTAC 59.771 37.037 0.00 0.00 0.00 3.67
1248 1300 4.282703 GGGATTCAGGGATGGATTTGATTG 59.717 45.833 0.00 0.00 0.00 2.67
1259 1311 4.256180 GGCGCGGGATTCAGGGAT 62.256 66.667 8.83 0.00 0.00 3.85
1290 1342 1.807573 GGAGGCAAGAAGCTCGACG 60.808 63.158 0.00 0.00 44.79 5.12
1292 1344 0.396435 TTTGGAGGCAAGAAGCTCGA 59.604 50.000 0.00 0.00 44.79 4.04
1384 1436 2.046314 CCTTCGGGTTCATGGCGT 60.046 61.111 0.00 0.00 0.00 5.68
1402 1454 4.436986 CGTAGCCGCTCTAATCGATCAATA 60.437 45.833 0.00 0.00 0.00 1.90
1405 1457 1.197036 CGTAGCCGCTCTAATCGATCA 59.803 52.381 0.00 0.00 0.00 2.92
1409 1461 0.030369 AACCGTAGCCGCTCTAATCG 59.970 55.000 0.00 0.00 0.00 3.34
1419 1471 6.142958 GTCGTAATTATCACTTAACCGTAGCC 59.857 42.308 0.00 0.00 0.00 3.93
1422 1474 8.061857 CGTAGTCGTAATTATCACTTAACCGTA 58.938 37.037 4.98 0.00 0.00 4.02
1434 1490 8.758715 GCTTAAATCAACCGTAGTCGTAATTAT 58.241 33.333 0.00 0.00 35.01 1.28
1440 1496 3.256558 GGCTTAAATCAACCGTAGTCGT 58.743 45.455 0.00 0.00 35.01 4.34
1441 1497 2.606272 GGGCTTAAATCAACCGTAGTCG 59.394 50.000 0.00 0.00 0.00 4.18
1459 1516 2.685897 CGATAGACAGATAGCTAGGGGC 59.314 54.545 0.00 0.00 39.20 5.80
1463 1520 5.539582 GGTGACGATAGACAGATAGCTAG 57.460 47.826 0.00 0.00 42.34 3.42
1511 1572 2.600388 TGAAGTTTCAGACGGCACG 58.400 52.632 0.00 0.00 45.30 5.34
1512 1573 4.946784 AATATGAAGTTTCAGACGGCAC 57.053 40.909 0.00 0.00 41.08 5.01
1513 1574 4.759693 ACAAATATGAAGTTTCAGACGGCA 59.240 37.500 0.00 0.00 41.08 5.69
1514 1575 5.088739 CACAAATATGAAGTTTCAGACGGC 58.911 41.667 0.74 0.00 41.08 5.68
1515 1576 6.073276 TGTCACAAATATGAAGTTTCAGACGG 60.073 38.462 0.74 0.00 41.08 4.79
1516 1577 6.887368 TGTCACAAATATGAAGTTTCAGACG 58.113 36.000 0.74 0.00 41.08 4.18
1517 1578 7.865707 ACTGTCACAAATATGAAGTTTCAGAC 58.134 34.615 0.74 1.99 41.08 3.51
1518 1579 7.933577 AGACTGTCACAAATATGAAGTTTCAGA 59.066 33.333 10.88 0.00 41.08 3.27
1519 1580 8.092521 AGACTGTCACAAATATGAAGTTTCAG 57.907 34.615 10.88 0.00 41.08 3.02
1520 1581 9.725019 ATAGACTGTCACAAATATGAAGTTTCA 57.275 29.630 10.88 0.00 42.14 2.69
1522 1583 9.950496 AGATAGACTGTCACAAATATGAAGTTT 57.050 29.630 10.88 0.00 0.00 2.66
1523 1584 9.376075 CAGATAGACTGTCACAAATATGAAGTT 57.624 33.333 10.88 0.00 41.30 2.66
1524 1585 8.753133 TCAGATAGACTGTCACAAATATGAAGT 58.247 33.333 10.88 0.00 45.86 3.01
1525 1586 9.591792 TTCAGATAGACTGTCACAAATATGAAG 57.408 33.333 10.88 0.00 45.86 3.02
1526 1587 9.591792 CTTCAGATAGACTGTCACAAATATGAA 57.408 33.333 10.88 13.77 45.86 2.57
1527 1588 8.971073 TCTTCAGATAGACTGTCACAAATATGA 58.029 33.333 10.88 7.85 45.86 2.15
1528 1589 9.029243 GTCTTCAGATAGACTGTCACAAATATG 57.971 37.037 10.88 5.82 45.86 1.78
1529 1590 7.918033 CGTCTTCAGATAGACTGTCACAAATAT 59.082 37.037 10.88 0.00 45.86 1.28
1530 1591 7.094334 ACGTCTTCAGATAGACTGTCACAAATA 60.094 37.037 10.88 0.00 45.86 1.40
1531 1592 6.096036 CGTCTTCAGATAGACTGTCACAAAT 58.904 40.000 10.88 0.00 45.86 2.32
1532 1593 5.009710 ACGTCTTCAGATAGACTGTCACAAA 59.990 40.000 10.88 0.00 45.86 2.83
1533 1594 4.519350 ACGTCTTCAGATAGACTGTCACAA 59.481 41.667 10.88 0.00 45.86 3.33
1534 1595 4.072839 ACGTCTTCAGATAGACTGTCACA 58.927 43.478 10.88 0.00 45.86 3.58
1535 1596 4.407818 CACGTCTTCAGATAGACTGTCAC 58.592 47.826 10.88 1.37 45.86 3.67
1536 1597 3.119814 GCACGTCTTCAGATAGACTGTCA 60.120 47.826 10.88 0.00 45.86 3.58
1537 1598 3.127895 AGCACGTCTTCAGATAGACTGTC 59.872 47.826 0.00 0.00 45.86 3.51
1538 1599 3.085533 AGCACGTCTTCAGATAGACTGT 58.914 45.455 0.00 0.00 45.86 3.55
1539 1600 3.119673 ACAGCACGTCTTCAGATAGACTG 60.120 47.826 0.00 0.00 46.97 3.51
1540 1601 3.085533 ACAGCACGTCTTCAGATAGACT 58.914 45.455 0.00 0.00 41.89 3.24
1541 1602 3.430931 GACAGCACGTCTTCAGATAGAC 58.569 50.000 0.00 0.00 41.81 2.59
1542 1603 3.766676 GACAGCACGTCTTCAGATAGA 57.233 47.619 0.00 0.00 41.81 1.98
1558 1619 7.864686 TGTCACAAATATGAAGTTTCAGACAG 58.135 34.615 0.74 0.00 41.08 3.51
1574 1635 5.219343 TCATCTGTCAGACTGTCACAAAT 57.781 39.130 10.88 0.00 0.00 2.32
1632 1693 9.927668 CACCAAGGAAAATGTTCAATAAGTATT 57.072 29.630 0.00 0.00 35.25 1.89
1633 1694 9.308000 TCACCAAGGAAAATGTTCAATAAGTAT 57.692 29.630 0.00 0.00 35.25 2.12
1634 1695 8.698973 TCACCAAGGAAAATGTTCAATAAGTA 57.301 30.769 0.00 0.00 35.25 2.24
1635 1696 7.505585 TCTCACCAAGGAAAATGTTCAATAAGT 59.494 33.333 0.00 0.00 35.25 2.24
1636 1697 7.885297 TCTCACCAAGGAAAATGTTCAATAAG 58.115 34.615 0.00 0.00 35.25 1.73
1637 1698 7.831691 TCTCACCAAGGAAAATGTTCAATAA 57.168 32.000 0.00 0.00 35.25 1.40
1664 1725 7.759465 AGTGAAATCAAGCTGTTCAATATCTG 58.241 34.615 0.00 0.00 33.29 2.90
1666 1727 8.976986 AAAGTGAAATCAAGCTGTTCAATATC 57.023 30.769 0.00 0.00 33.29 1.63
1670 1731 5.451798 GGGAAAGTGAAATCAAGCTGTTCAA 60.452 40.000 0.00 0.00 33.29 2.69
1678 1739 2.159627 CGTCGGGGAAAGTGAAATCAAG 59.840 50.000 0.00 0.00 0.00 3.02
1683 1744 0.754472 ACTCGTCGGGGAAAGTGAAA 59.246 50.000 0.00 0.00 0.00 2.69
1689 1750 0.754472 AAAGTCACTCGTCGGGGAAA 59.246 50.000 0.00 0.00 0.00 3.13
1699 1760 7.155328 TGGAGATTTCTAGTTGAAAGTCACTC 58.845 38.462 5.97 10.15 46.39 3.51
1704 1765 5.221925 TGGCTGGAGATTTCTAGTTGAAAGT 60.222 40.000 5.97 0.00 46.39 2.66
1711 1772 1.488393 GGCTGGCTGGAGATTTCTAGT 59.512 52.381 0.00 0.00 34.62 2.57
1727 1788 1.392589 AAACTTGTCAGGTGTGGCTG 58.607 50.000 0.00 0.00 0.00 4.85
1728 1789 1.750778 CAAAACTTGTCAGGTGTGGCT 59.249 47.619 0.00 0.00 0.00 4.75
1734 1795 3.616317 GCAAACACCAAAACTTGTCAGGT 60.616 43.478 0.00 0.00 0.00 4.00
1736 1797 3.367630 GTGCAAACACCAAAACTTGTCAG 59.632 43.478 0.00 0.00 41.21 3.51
1737 1798 3.321497 GTGCAAACACCAAAACTTGTCA 58.679 40.909 0.00 0.00 41.21 3.58
1738 1799 2.344142 CGTGCAAACACCAAAACTTGTC 59.656 45.455 0.00 0.00 44.40 3.18
1739 1800 2.029828 TCGTGCAAACACCAAAACTTGT 60.030 40.909 0.00 0.00 44.40 3.16
1740 1801 2.600731 TCGTGCAAACACCAAAACTTG 58.399 42.857 0.00 0.00 44.40 3.16
1741 1802 3.518634 ATCGTGCAAACACCAAAACTT 57.481 38.095 0.00 0.00 44.40 2.66
1742 1803 3.550030 GCTATCGTGCAAACACCAAAACT 60.550 43.478 0.00 0.00 44.40 2.66
1743 1804 2.724174 GCTATCGTGCAAACACCAAAAC 59.276 45.455 0.00 0.00 44.40 2.43
1744 1805 2.621055 AGCTATCGTGCAAACACCAAAA 59.379 40.909 0.00 0.00 44.40 2.44
1750 1812 3.865164 CAGTATCAGCTATCGTGCAAACA 59.135 43.478 0.00 0.00 34.99 2.83
1752 1814 4.123497 ACAGTATCAGCTATCGTGCAAA 57.877 40.909 0.00 0.00 34.99 3.68
1755 1817 5.977725 TCTTTTACAGTATCAGCTATCGTGC 59.022 40.000 0.00 0.00 0.00 5.34
1759 1821 9.989869 GGTTTTTCTTTTACAGTATCAGCTATC 57.010 33.333 0.00 0.00 0.00 2.08
1764 1828 8.076178 CCAGTGGTTTTTCTTTTACAGTATCAG 58.924 37.037 0.00 0.00 0.00 2.90
1766 1830 6.861572 GCCAGTGGTTTTTCTTTTACAGTATC 59.138 38.462 11.74 0.00 0.00 2.24
1779 1843 2.301583 ACACAAACAGCCAGTGGTTTTT 59.698 40.909 11.74 0.48 31.77 1.94
1792 1856 8.994429 AAACACATTAATGAAAGACACAAACA 57.006 26.923 22.16 0.00 0.00 2.83
1823 1887 9.642327 TGCAACAAATTACTAATAGTAGTTCGA 57.358 29.630 8.34 0.00 41.06 3.71
1867 2056 8.509690 GCTACTGACAGATATACAACCGTATTA 58.490 37.037 10.08 0.00 39.17 0.98
1871 2060 4.643334 TGCTACTGACAGATATACAACCGT 59.357 41.667 10.08 0.00 0.00 4.83
1927 2122 3.690460 AGTAGGCATTCAGACTTTTGGG 58.310 45.455 0.00 0.00 36.54 4.12
1970 2166 1.543429 GGCAAATATGAGACCGAGGGG 60.543 57.143 0.00 0.00 40.11 4.79
1971 2167 1.140852 TGGCAAATATGAGACCGAGGG 59.859 52.381 0.00 0.00 0.00 4.30
1992 2188 5.199024 AGAGCTGTATATGCAGTCTCTTG 57.801 43.478 26.47 5.99 42.00 3.02
2302 2500 5.447010 GCTCTGTCAGTATTTCAAGCATGTC 60.447 44.000 0.00 0.00 0.00 3.06
2332 2530 4.196193 TGAACGGTTTTCCTGCCATATAG 58.804 43.478 0.00 0.00 37.95 1.31
2335 2533 2.039216 TCTGAACGGTTTTCCTGCCATA 59.961 45.455 0.00 0.00 37.95 2.74
2380 2578 6.814954 AACTCCTGATGGAAGCTCTAATAA 57.185 37.500 0.00 0.00 42.66 1.40
2382 2580 5.707066 AAACTCCTGATGGAAGCTCTAAT 57.293 39.130 0.00 0.00 42.66 1.73
2424 2622 2.764572 GAGGTATCTTCTTTCCCCGTCA 59.235 50.000 0.00 0.00 0.00 4.35
2520 2718 8.331931 TGGTAATGGTAAGTAAGATCAGGAAT 57.668 34.615 0.00 0.00 0.00 3.01
2523 2721 6.766467 GGTTGGTAATGGTAAGTAAGATCAGG 59.234 42.308 0.00 0.00 0.00 3.86
2532 2730 8.886369 TGCTATATATGGTTGGTAATGGTAAGT 58.114 33.333 0.00 0.00 0.00 2.24
2533 2731 9.162764 GTGCTATATATGGTTGGTAATGGTAAG 57.837 37.037 0.00 0.00 0.00 2.34
2534 2732 8.104566 GGTGCTATATATGGTTGGTAATGGTAA 58.895 37.037 0.00 0.00 0.00 2.85
2535 2733 7.237887 TGGTGCTATATATGGTTGGTAATGGTA 59.762 37.037 0.00 0.00 0.00 3.25
2536 2734 6.044989 TGGTGCTATATATGGTTGGTAATGGT 59.955 38.462 0.00 0.00 0.00 3.55
2537 2735 6.480763 TGGTGCTATATATGGTTGGTAATGG 58.519 40.000 0.00 0.00 0.00 3.16
2538 2736 8.579850 AATGGTGCTATATATGGTTGGTAATG 57.420 34.615 0.00 0.00 0.00 1.90
2539 2737 7.834181 GGAATGGTGCTATATATGGTTGGTAAT 59.166 37.037 0.00 0.00 0.00 1.89
2540 2738 7.018149 AGGAATGGTGCTATATATGGTTGGTAA 59.982 37.037 0.00 0.00 0.00 2.85
2541 2739 6.503924 AGGAATGGTGCTATATATGGTTGGTA 59.496 38.462 0.00 0.00 0.00 3.25
2542 2740 5.313240 AGGAATGGTGCTATATATGGTTGGT 59.687 40.000 0.00 0.00 0.00 3.67
2543 2741 5.649395 CAGGAATGGTGCTATATATGGTTGG 59.351 44.000 0.00 0.00 0.00 3.77
2544 2742 6.372659 GTCAGGAATGGTGCTATATATGGTTG 59.627 42.308 0.00 0.00 0.00 3.77
2545 2743 6.044287 TGTCAGGAATGGTGCTATATATGGTT 59.956 38.462 0.00 0.00 0.00 3.67
2546 2744 5.547666 TGTCAGGAATGGTGCTATATATGGT 59.452 40.000 0.00 0.00 0.00 3.55
2547 2745 5.877012 GTGTCAGGAATGGTGCTATATATGG 59.123 44.000 0.00 0.00 0.00 2.74
2548 2746 6.592994 CAGTGTCAGGAATGGTGCTATATATG 59.407 42.308 0.00 0.00 0.00 1.78
2549 2747 6.498303 TCAGTGTCAGGAATGGTGCTATATAT 59.502 38.462 0.00 0.00 0.00 0.86
2550 2748 5.838521 TCAGTGTCAGGAATGGTGCTATATA 59.161 40.000 0.00 0.00 0.00 0.86
2551 2749 4.655649 TCAGTGTCAGGAATGGTGCTATAT 59.344 41.667 0.00 0.00 0.00 0.86
2552 2750 4.030216 TCAGTGTCAGGAATGGTGCTATA 58.970 43.478 0.00 0.00 0.00 1.31
2553 2751 2.840038 TCAGTGTCAGGAATGGTGCTAT 59.160 45.455 0.00 0.00 0.00 2.97
2554 2752 2.256306 TCAGTGTCAGGAATGGTGCTA 58.744 47.619 0.00 0.00 0.00 3.49
2555 2753 1.059098 TCAGTGTCAGGAATGGTGCT 58.941 50.000 0.00 0.00 0.00 4.40
2556 2754 2.012673 GATCAGTGTCAGGAATGGTGC 58.987 52.381 0.00 0.00 0.00 5.01
2557 2755 3.339253 TGATCAGTGTCAGGAATGGTG 57.661 47.619 0.00 0.00 0.00 4.17
2558 2756 3.307975 CCTTGATCAGTGTCAGGAATGGT 60.308 47.826 4.60 0.00 0.00 3.55
2559 2757 3.276857 CCTTGATCAGTGTCAGGAATGG 58.723 50.000 4.60 0.00 0.00 3.16
2560 2758 3.688185 CACCTTGATCAGTGTCAGGAATG 59.312 47.826 15.80 2.75 0.00 2.67
2561 2759 3.328931 ACACCTTGATCAGTGTCAGGAAT 59.671 43.478 15.80 2.30 43.62 3.01
2562 2760 2.705658 ACACCTTGATCAGTGTCAGGAA 59.294 45.455 15.80 0.00 43.62 3.36
2563 2761 2.329267 ACACCTTGATCAGTGTCAGGA 58.671 47.619 15.80 0.00 43.62 3.86
2564 2762 2.847327 ACACCTTGATCAGTGTCAGG 57.153 50.000 13.45 11.08 43.62 3.86
2597 2795 4.749598 TCACCGATGATCAAATGAATACCG 59.250 41.667 0.00 0.00 0.00 4.02
2603 2801 3.543665 TGCATCACCGATGATCAAATGA 58.456 40.909 8.14 1.69 44.13 2.57
2922 3120 0.178984 TGTAGAGGACGGTGGTGACA 60.179 55.000 0.00 0.00 38.70 3.58
2982 3180 4.379243 CTCCTGTTCGGCGGCACT 62.379 66.667 10.53 0.00 0.00 4.40
2997 3195 0.673956 GGGTGAAAACCCTCTCGCTC 60.674 60.000 6.68 0.00 46.39 5.03
3007 3205 2.350772 CGCAGACATGAAGGGTGAAAAC 60.351 50.000 0.00 0.00 0.00 2.43
3017 3215 1.878069 CGATCGGCGCAGACATGAA 60.878 57.895 13.72 0.00 27.25 2.57
3096 3296 0.992802 GCGAAACCAGTCATCTCGAC 59.007 55.000 0.00 0.00 45.77 4.20
3097 3297 0.888619 AGCGAAACCAGTCATCTCGA 59.111 50.000 0.00 0.00 0.00 4.04
3098 3298 1.391485 CAAGCGAAACCAGTCATCTCG 59.609 52.381 0.00 0.00 0.00 4.04
3099 3299 2.413453 GACAAGCGAAACCAGTCATCTC 59.587 50.000 0.00 0.00 0.00 2.75
3100 3300 2.224281 TGACAAGCGAAACCAGTCATCT 60.224 45.455 0.00 0.00 34.59 2.90
3101 3301 2.143122 TGACAAGCGAAACCAGTCATC 58.857 47.619 0.00 0.00 34.59 2.92
3102 3302 2.254546 TGACAAGCGAAACCAGTCAT 57.745 45.000 0.00 0.00 34.59 3.06
3103 3303 1.939934 CTTGACAAGCGAAACCAGTCA 59.060 47.619 1.43 0.00 37.43 3.41
3104 3304 2.210116 TCTTGACAAGCGAAACCAGTC 58.790 47.619 10.50 0.00 0.00 3.51
3106 3306 3.904136 ATTCTTGACAAGCGAAACCAG 57.096 42.857 10.50 0.00 0.00 4.00
3107 3307 5.759506 TTTATTCTTGACAAGCGAAACCA 57.240 34.783 10.50 0.00 0.00 3.67
3108 3308 6.861055 TGATTTTATTCTTGACAAGCGAAACC 59.139 34.615 10.50 1.15 0.00 3.27
3110 3310 7.870826 TCTGATTTTATTCTTGACAAGCGAAA 58.129 30.769 10.50 7.44 0.00 3.46
3111 3311 7.173218 ACTCTGATTTTATTCTTGACAAGCGAA 59.827 33.333 10.50 1.40 0.00 4.70
3112 3312 6.650807 ACTCTGATTTTATTCTTGACAAGCGA 59.349 34.615 10.50 2.15 0.00 4.93
3113 3313 6.835914 ACTCTGATTTTATTCTTGACAAGCG 58.164 36.000 10.50 0.00 0.00 4.68
3114 3314 9.548208 GTTACTCTGATTTTATTCTTGACAAGC 57.452 33.333 10.50 0.00 0.00 4.01
3162 3363 3.851403 CGTTAAAACAGGCATATGCACAC 59.149 43.478 28.07 11.85 44.36 3.82
3165 3366 3.085533 ACCGTTAAAACAGGCATATGCA 58.914 40.909 28.07 3.70 44.36 3.96
3166 3367 3.434637 CACCGTTAAAACAGGCATATGC 58.565 45.455 19.79 19.79 41.14 3.14
3171 3372 0.948678 GAGCACCGTTAAAACAGGCA 59.051 50.000 0.00 0.00 0.00 4.75
3177 3378 2.685897 AGCAAGTTGAGCACCGTTAAAA 59.314 40.909 7.16 0.00 0.00 1.52
3181 3382 1.166531 GGAGCAAGTTGAGCACCGTT 61.167 55.000 7.16 0.00 33.22 4.44
3195 3397 2.791383 CAACGATTTTGTTGGGAGCA 57.209 45.000 3.18 0.00 44.27 4.26
3210 3412 6.358118 TCCTAGCAATTATAAACAGCAACG 57.642 37.500 9.04 0.00 0.00 4.10
3251 3455 9.541884 TCCCCTTTATTTAAGTTTTTCTAGCAT 57.458 29.630 0.00 0.00 31.56 3.79
3252 3456 8.943594 TCCCCTTTATTTAAGTTTTTCTAGCA 57.056 30.769 0.00 0.00 31.56 3.49
3255 3459 9.962809 TCGATCCCCTTTATTTAAGTTTTTCTA 57.037 29.630 0.00 0.00 31.56 2.10
3256 3460 8.737175 GTCGATCCCCTTTATTTAAGTTTTTCT 58.263 33.333 0.00 0.00 31.56 2.52
3257 3461 8.737175 AGTCGATCCCCTTTATTTAAGTTTTTC 58.263 33.333 0.00 0.00 31.56 2.29
3267 3471 3.136626 CCTGGAAGTCGATCCCCTTTATT 59.863 47.826 2.62 0.00 38.82 1.40
3272 3476 1.383248 CCCTGGAAGTCGATCCCCT 60.383 63.158 2.62 0.00 38.82 4.79
3275 3494 0.759436 TAGGCCCTGGAAGTCGATCC 60.759 60.000 0.00 0.00 40.10 3.36
3280 3499 1.213296 TCCATTAGGCCCTGGAAGTC 58.787 55.000 15.13 0.00 38.59 3.01
3281 3500 1.681229 TTCCATTAGGCCCTGGAAGT 58.319 50.000 22.03 0.00 44.56 3.01
3287 3506 4.689983 GCTACAATCTTTCCATTAGGCCCT 60.690 45.833 0.00 0.00 33.74 5.19
3292 3511 6.261826 CCTTCAGGCTACAATCTTTCCATTAG 59.738 42.308 0.00 0.00 0.00 1.73
3295 3514 4.530875 CCTTCAGGCTACAATCTTTCCAT 58.469 43.478 0.00 0.00 0.00 3.41
3312 3531 2.032528 CTCGCTGTTGGGCCTTCA 59.967 61.111 4.53 2.88 0.00 3.02
3313 3532 3.435186 GCTCGCTGTTGGGCCTTC 61.435 66.667 4.53 0.00 0.00 3.46
3368 3587 3.727970 GCTTTTCAGGTTTCCGCTTATCG 60.728 47.826 0.00 0.00 38.08 2.92
3369 3588 3.440522 AGCTTTTCAGGTTTCCGCTTATC 59.559 43.478 0.00 0.00 0.00 1.75
3370 3589 3.191371 CAGCTTTTCAGGTTTCCGCTTAT 59.809 43.478 0.00 0.00 0.00 1.73
3371 3590 2.552315 CAGCTTTTCAGGTTTCCGCTTA 59.448 45.455 0.00 0.00 0.00 3.09
3372 3591 1.338020 CAGCTTTTCAGGTTTCCGCTT 59.662 47.619 0.00 0.00 0.00 4.68
3373 3592 0.954452 CAGCTTTTCAGGTTTCCGCT 59.046 50.000 0.00 0.00 0.00 5.52
3374 3593 0.039165 CCAGCTTTTCAGGTTTCCGC 60.039 55.000 0.00 0.00 0.00 5.54
3375 3594 1.537202 CTCCAGCTTTTCAGGTTTCCG 59.463 52.381 0.00 0.00 0.00 4.30
3376 3595 1.889170 CCTCCAGCTTTTCAGGTTTCC 59.111 52.381 0.00 0.00 0.00 3.13
3377 3596 2.554462 GTCCTCCAGCTTTTCAGGTTTC 59.446 50.000 0.00 0.00 0.00 2.78
3381 3600 0.674895 CGGTCCTCCAGCTTTTCAGG 60.675 60.000 0.00 0.00 0.00 3.86
3385 3604 0.035458 CAGTCGGTCCTCCAGCTTTT 59.965 55.000 0.00 0.00 0.00 2.27
3387 3606 2.286523 CCAGTCGGTCCTCCAGCTT 61.287 63.158 0.00 0.00 0.00 3.74
3399 3618 2.243957 TGCACAGTTTCGCCAGTCG 61.244 57.895 0.00 0.00 40.15 4.18
3402 3621 1.571460 GAGTGCACAGTTTCGCCAG 59.429 57.895 21.04 0.00 0.00 4.85
3414 3633 4.980805 GTTGGGACGCGGAGTGCA 62.981 66.667 12.47 0.00 46.97 4.57
3458 3677 0.897621 GGCATCTTTCAAACAGGGGG 59.102 55.000 0.00 0.00 0.00 5.40
3532 3751 1.448540 GTGCATCTCTGTGGACGGG 60.449 63.158 0.00 0.00 30.82 5.28
3628 3848 7.655328 TGCGAAAAGAAAATGATAAAACCATGT 59.345 29.630 0.00 0.00 0.00 3.21
3677 3908 1.979308 TCCCCACAAAACGAGGATGTA 59.021 47.619 0.00 0.00 0.00 2.29
3678 3909 0.768622 TCCCCACAAAACGAGGATGT 59.231 50.000 0.00 0.00 0.00 3.06
3679 3910 2.128771 ATCCCCACAAAACGAGGATG 57.871 50.000 0.00 0.00 35.99 3.51
3680 3911 2.041081 TCAATCCCCACAAAACGAGGAT 59.959 45.455 0.00 0.00 39.02 3.24
3681 3912 1.422024 TCAATCCCCACAAAACGAGGA 59.578 47.619 0.00 0.00 0.00 3.71
3682 3913 1.904287 TCAATCCCCACAAAACGAGG 58.096 50.000 0.00 0.00 0.00 4.63
3683 3914 2.423538 GGATCAATCCCCACAAAACGAG 59.576 50.000 0.00 0.00 41.20 4.18
3684 3915 2.442413 GGATCAATCCCCACAAAACGA 58.558 47.619 0.00 0.00 41.20 3.85
3685 3916 1.132262 CGGATCAATCCCCACAAAACG 59.868 52.381 3.45 0.00 44.24 3.60
3687 3918 1.181786 GCGGATCAATCCCCACAAAA 58.818 50.000 3.45 0.00 44.24 2.44
3688 3919 0.331278 AGCGGATCAATCCCCACAAA 59.669 50.000 3.45 0.00 44.24 2.83
3689 3920 1.208706 TAGCGGATCAATCCCCACAA 58.791 50.000 3.45 0.00 44.24 3.33
3691 3922 1.072331 ACATAGCGGATCAATCCCCAC 59.928 52.381 3.45 0.00 44.24 4.61
3704 3937 5.348724 AGTGTGAATAGTGAACAACATAGCG 59.651 40.000 0.00 0.00 0.00 4.26
3705 3938 6.727824 AGTGTGAATAGTGAACAACATAGC 57.272 37.500 0.00 0.00 0.00 2.97
3722 3955 8.544622 TCATGGTATACCTTATGAAAAGTGTGA 58.455 33.333 22.41 3.25 36.82 3.58
3723 3956 8.731275 TCATGGTATACCTTATGAAAAGTGTG 57.269 34.615 22.41 1.02 36.82 3.82
3734 3967 6.056090 TGTGCAACTTCATGGTATACCTTA 57.944 37.500 22.41 3.82 38.04 2.69
3740 3973 9.135189 ACAAATATATGTGCAACTTCATGGTAT 57.865 29.630 2.55 0.00 38.04 2.73
3744 3977 7.709947 AGGACAAATATATGTGCAACTTCATG 58.290 34.615 2.55 0.00 43.32 3.07
3745 3978 7.776969 AGAGGACAAATATATGTGCAACTTCAT 59.223 33.333 2.55 0.00 43.32 2.57
3748 3981 7.944729 AAGAGGACAAATATATGTGCAACTT 57.055 32.000 2.55 4.35 43.32 2.66
3751 3984 8.439971 AGGATAAGAGGACAAATATATGTGCAA 58.560 33.333 2.55 0.00 43.32 4.08
3756 3989 9.512588 AGCAAAGGATAAGAGGACAAATATATG 57.487 33.333 0.00 0.00 0.00 1.78
3762 3995 7.016153 TCTTAGCAAAGGATAAGAGGACAAA 57.984 36.000 0.00 0.00 44.63 2.83
3805 4039 7.809806 AGTCTTCAAAAATTCCGCTTAGAAATG 59.190 33.333 0.00 0.00 0.00 2.32
3815 4049 6.086371 GCGTCTAAAAGTCTTCAAAAATTCCG 59.914 38.462 0.00 0.00 0.00 4.30
3824 4058 3.358707 TCACGCGTCTAAAAGTCTTCA 57.641 42.857 9.86 0.00 0.00 3.02
3840 4074 0.593128 CCTTCCAGGTTGCTTTCACG 59.407 55.000 0.00 0.00 0.00 4.35
3855 4089 4.372656 CTTGACGGTCTATGGAATCCTTC 58.627 47.826 9.88 0.00 0.00 3.46
3856 4090 3.134804 CCTTGACGGTCTATGGAATCCTT 59.865 47.826 9.88 0.00 0.00 3.36
3857 4091 2.700897 CCTTGACGGTCTATGGAATCCT 59.299 50.000 9.88 0.00 0.00 3.24
3858 4092 2.224305 CCCTTGACGGTCTATGGAATCC 60.224 54.545 9.88 0.00 0.00 3.01
3859 4093 2.698797 TCCCTTGACGGTCTATGGAATC 59.301 50.000 12.55 0.00 0.00 2.52
3860 4094 2.759355 TCCCTTGACGGTCTATGGAAT 58.241 47.619 12.55 0.00 0.00 3.01
3861 4095 2.241281 TCCCTTGACGGTCTATGGAA 57.759 50.000 12.55 0.00 0.00 3.53
3862 4096 2.241281 TTCCCTTGACGGTCTATGGA 57.759 50.000 11.30 11.30 0.00 3.41
3863 4097 3.560636 ATTTCCCTTGACGGTCTATGG 57.439 47.619 9.88 8.48 0.00 2.74
3864 4098 5.050490 CAGTATTTCCCTTGACGGTCTATG 58.950 45.833 9.88 0.00 0.00 2.23
3865 4099 4.715297 ACAGTATTTCCCTTGACGGTCTAT 59.285 41.667 9.88 0.00 0.00 1.98
3866 4100 4.081862 CACAGTATTTCCCTTGACGGTCTA 60.082 45.833 9.88 0.43 0.00 2.59
3867 4101 2.904434 ACAGTATTTCCCTTGACGGTCT 59.096 45.455 9.88 0.00 0.00 3.85
3868 4102 3.000727 CACAGTATTTCCCTTGACGGTC 58.999 50.000 0.00 0.00 0.00 4.79
3869 4103 2.370849 ACACAGTATTTCCCTTGACGGT 59.629 45.455 0.00 0.00 0.00 4.83
3870 4104 3.053831 ACACAGTATTTCCCTTGACGG 57.946 47.619 0.00 0.00 0.00 4.79
3871 4105 5.068234 TCTACACAGTATTTCCCTTGACG 57.932 43.478 0.00 0.00 0.00 4.35
3872 4106 6.148976 GGTTTCTACACAGTATTTCCCTTGAC 59.851 42.308 0.00 0.00 0.00 3.18
3873 4107 6.235664 GGTTTCTACACAGTATTTCCCTTGA 58.764 40.000 0.00 0.00 0.00 3.02
3874 4108 5.121768 CGGTTTCTACACAGTATTTCCCTTG 59.878 44.000 0.00 0.00 0.00 3.61
3875 4109 5.243207 CGGTTTCTACACAGTATTTCCCTT 58.757 41.667 0.00 0.00 0.00 3.95
3876 4110 4.828829 CGGTTTCTACACAGTATTTCCCT 58.171 43.478 0.00 0.00 0.00 4.20
3877 4111 3.373130 GCGGTTTCTACACAGTATTTCCC 59.627 47.826 0.00 0.00 0.00 3.97
3878 4112 3.061697 CGCGGTTTCTACACAGTATTTCC 59.938 47.826 0.00 0.00 0.00 3.13
3879 4113 3.676646 ACGCGGTTTCTACACAGTATTTC 59.323 43.478 12.47 0.00 0.00 2.17
3880 4114 3.656559 ACGCGGTTTCTACACAGTATTT 58.343 40.909 12.47 0.00 0.00 1.40
3881 4115 3.308438 ACGCGGTTTCTACACAGTATT 57.692 42.857 12.47 0.00 0.00 1.89
3882 4116 4.644103 ATACGCGGTTTCTACACAGTAT 57.356 40.909 12.47 0.00 0.00 2.12
3883 4117 4.439305 AATACGCGGTTTCTACACAGTA 57.561 40.909 12.47 0.00 0.00 2.74
3884 4118 3.308438 AATACGCGGTTTCTACACAGT 57.692 42.857 12.47 0.00 0.00 3.55
3885 4119 3.430895 ACAAATACGCGGTTTCTACACAG 59.569 43.478 12.47 0.42 0.00 3.66
3886 4120 3.391965 ACAAATACGCGGTTTCTACACA 58.608 40.909 12.47 0.00 0.00 3.72
3887 4121 4.394099 AACAAATACGCGGTTTCTACAC 57.606 40.909 12.47 0.00 0.00 2.90
3888 4122 4.083908 GGAAACAAATACGCGGTTTCTACA 60.084 41.667 26.01 0.00 45.90 2.74
3889 4123 4.083908 TGGAAACAAATACGCGGTTTCTAC 60.084 41.667 26.01 16.56 45.90 2.59
3890 4124 4.063689 TGGAAACAAATACGCGGTTTCTA 58.936 39.130 26.01 21.30 45.90 2.10
3891 4125 2.879646 TGGAAACAAATACGCGGTTTCT 59.120 40.909 26.01 8.82 45.90 2.52
3892 4126 2.975193 GTGGAAACAAATACGCGGTTTC 59.025 45.455 21.94 21.94 45.91 2.78
3893 4127 2.358267 TGTGGAAACAAATACGCGGTTT 59.642 40.909 12.47 10.78 46.06 3.27
3894 4128 1.948145 TGTGGAAACAAATACGCGGTT 59.052 42.857 12.47 0.58 46.06 4.44
3895 4129 1.595466 TGTGGAAACAAATACGCGGT 58.405 45.000 12.47 0.00 46.06 5.68
3896 4130 2.690173 TTGTGGAAACAAATACGCGG 57.310 45.000 12.47 0.00 46.06 6.46
3920 4154 9.929180 ACAATGATTGACGTAATAGCATAGTAT 57.071 29.630 12.80 0.00 0.00 2.12
3921 4155 9.406828 GACAATGATTGACGTAATAGCATAGTA 57.593 33.333 12.80 0.00 0.00 1.82
3922 4156 7.385205 GGACAATGATTGACGTAATAGCATAGT 59.615 37.037 12.80 0.00 0.00 2.12
3923 4157 7.600375 AGGACAATGATTGACGTAATAGCATAG 59.400 37.037 12.80 0.00 0.00 2.23
3924 4158 7.441836 AGGACAATGATTGACGTAATAGCATA 58.558 34.615 12.80 0.00 0.00 3.14
3925 4159 6.291377 AGGACAATGATTGACGTAATAGCAT 58.709 36.000 12.80 0.00 0.00 3.79
3926 4160 5.670485 AGGACAATGATTGACGTAATAGCA 58.330 37.500 12.80 0.00 0.00 3.49
3927 4161 5.107837 CGAGGACAATGATTGACGTAATAGC 60.108 44.000 12.80 0.00 0.00 2.97
3928 4162 5.977725 ACGAGGACAATGATTGACGTAATAG 59.022 40.000 12.80 3.36 32.45 1.73
3929 4163 5.746721 CACGAGGACAATGATTGACGTAATA 59.253 40.000 12.80 0.00 32.71 0.98
3930 4164 4.566759 CACGAGGACAATGATTGACGTAAT 59.433 41.667 12.80 0.00 32.71 1.89
3931 4165 3.924073 CACGAGGACAATGATTGACGTAA 59.076 43.478 12.80 0.00 32.71 3.18
3932 4166 3.057104 ACACGAGGACAATGATTGACGTA 60.057 43.478 12.80 0.00 32.71 3.57
3933 4167 2.288825 ACACGAGGACAATGATTGACGT 60.289 45.455 12.80 13.61 33.50 4.34
3934 4168 2.337583 ACACGAGGACAATGATTGACG 58.662 47.619 12.80 13.05 0.00 4.35
3935 4169 3.325870 TGACACGAGGACAATGATTGAC 58.674 45.455 12.80 5.57 0.00 3.18
3936 4170 3.676291 TGACACGAGGACAATGATTGA 57.324 42.857 12.80 0.00 0.00 2.57
3937 4171 4.268767 CATGACACGAGGACAATGATTG 57.731 45.455 3.16 3.16 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.