Multiple sequence alignment - TraesCS2A01G096700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G096700 chr2A 100.000 2549 0 0 1 2549 50274722 50272174 0 4708
1 TraesCS2A01G096700 chr4A 95.085 1994 83 10 569 2549 603147224 603145233 0 3125
2 TraesCS2A01G096700 chr3A 94.843 1978 88 9 571 2536 735555339 735557314 0 3075
3 TraesCS2A01G096700 chr3A 94.588 1977 91 10 573 2536 617401023 617402996 0 3044
4 TraesCS2A01G096700 chr5D 94.747 1980 85 12 572 2536 520497540 520495565 0 3062
5 TraesCS2A01G096700 chr5D 94.585 1976 91 10 573 2536 336262624 336264595 0 3042
6 TraesCS2A01G096700 chr7B 94.694 1979 88 11 571 2535 692881450 692883425 0 3057
7 TraesCS2A01G096700 chr6B 94.641 1978 89 10 573 2536 660437743 660435769 0 3049
8 TraesCS2A01G096700 chr6A 94.678 1973 89 10 569 2527 617222873 617220903 0 3048
9 TraesCS2A01G096700 chr7A 94.548 1981 91 10 571 2536 701581939 701583917 0 3044
10 TraesCS2A01G096700 chr2D 89.775 577 46 5 1 572 47224601 47225169 0 726
11 TraesCS2A01G096700 chr2B 87.252 604 38 7 1 572 74838830 74839426 0 652


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G096700 chr2A 50272174 50274722 2548 True 4708 4708 100.000 1 2549 1 chr2A.!!$R1 2548
1 TraesCS2A01G096700 chr4A 603145233 603147224 1991 True 3125 3125 95.085 569 2549 1 chr4A.!!$R1 1980
2 TraesCS2A01G096700 chr3A 735555339 735557314 1975 False 3075 3075 94.843 571 2536 1 chr3A.!!$F2 1965
3 TraesCS2A01G096700 chr3A 617401023 617402996 1973 False 3044 3044 94.588 573 2536 1 chr3A.!!$F1 1963
4 TraesCS2A01G096700 chr5D 520495565 520497540 1975 True 3062 3062 94.747 572 2536 1 chr5D.!!$R1 1964
5 TraesCS2A01G096700 chr5D 336262624 336264595 1971 False 3042 3042 94.585 573 2536 1 chr5D.!!$F1 1963
6 TraesCS2A01G096700 chr7B 692881450 692883425 1975 False 3057 3057 94.694 571 2535 1 chr7B.!!$F1 1964
7 TraesCS2A01G096700 chr6B 660435769 660437743 1974 True 3049 3049 94.641 573 2536 1 chr6B.!!$R1 1963
8 TraesCS2A01G096700 chr6A 617220903 617222873 1970 True 3048 3048 94.678 569 2527 1 chr6A.!!$R1 1958
9 TraesCS2A01G096700 chr7A 701581939 701583917 1978 False 3044 3044 94.548 571 2536 1 chr7A.!!$F1 1965
10 TraesCS2A01G096700 chr2D 47224601 47225169 568 False 726 726 89.775 1 572 1 chr2D.!!$F1 571
11 TraesCS2A01G096700 chr2B 74838830 74839426 596 False 652 652 87.252 1 572 1 chr2B.!!$F1 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
386 387 0.029567 CTATGCGAGGTCGACTCCAC 59.97 60.0 16.46 3.96 43.57 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2235 2384 1.923148 CCTTCCTTCCCTACCCATGTT 59.077 52.381 0.0 0.0 0.0 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 5.895636 TGGATTTGTGGTGCTTATAGTTG 57.104 39.130 0.00 0.00 0.00 3.16
48 49 5.565509 TGGATTTGTGGTGCTTATAGTTGA 58.434 37.500 0.00 0.00 0.00 3.18
49 50 6.007076 TGGATTTGTGGTGCTTATAGTTGAA 58.993 36.000 0.00 0.00 0.00 2.69
50 51 6.663093 TGGATTTGTGGTGCTTATAGTTGAAT 59.337 34.615 0.00 0.00 0.00 2.57
51 52 7.148086 TGGATTTGTGGTGCTTATAGTTGAATC 60.148 37.037 0.00 0.00 0.00 2.52
52 53 7.067494 GGATTTGTGGTGCTTATAGTTGAATCT 59.933 37.037 0.00 0.00 0.00 2.40
53 54 7.759489 TTTGTGGTGCTTATAGTTGAATCTT 57.241 32.000 0.00 0.00 0.00 2.40
54 55 6.741992 TGTGGTGCTTATAGTTGAATCTTG 57.258 37.500 0.00 0.00 0.00 3.02
55 56 5.123820 TGTGGTGCTTATAGTTGAATCTTGC 59.876 40.000 0.00 0.00 0.00 4.01
56 57 5.355350 GTGGTGCTTATAGTTGAATCTTGCT 59.645 40.000 0.00 0.00 0.00 3.91
57 58 6.538742 GTGGTGCTTATAGTTGAATCTTGCTA 59.461 38.462 0.00 0.00 0.00 3.49
58 59 7.227512 GTGGTGCTTATAGTTGAATCTTGCTAT 59.772 37.037 0.00 0.00 0.00 2.97
59 60 8.428852 TGGTGCTTATAGTTGAATCTTGCTATA 58.571 33.333 0.00 0.00 0.00 1.31
60 61 9.442047 GGTGCTTATAGTTGAATCTTGCTATAT 57.558 33.333 0.00 0.00 0.00 0.86
62 63 8.939929 TGCTTATAGTTGAATCTTGCTATATGC 58.060 33.333 18.10 18.10 42.05 3.14
63 64 8.113062 GCTTATAGTTGAATCTTGCTATATGCG 58.887 37.037 14.25 0.00 46.63 4.73
64 65 9.358872 CTTATAGTTGAATCTTGCTATATGCGA 57.641 33.333 0.00 0.00 46.63 5.10
65 66 9.705290 TTATAGTTGAATCTTGCTATATGCGAA 57.295 29.630 0.00 0.00 46.63 4.70
66 67 8.783833 ATAGTTGAATCTTGCTATATGCGAAT 57.216 30.769 0.00 0.00 46.63 3.34
67 68 6.895898 AGTTGAATCTTGCTATATGCGAATG 58.104 36.000 0.00 0.00 46.63 2.67
68 69 6.484643 AGTTGAATCTTGCTATATGCGAATGT 59.515 34.615 0.00 0.00 46.63 2.71
69 70 7.657354 AGTTGAATCTTGCTATATGCGAATGTA 59.343 33.333 0.00 0.00 46.63 2.29
70 71 8.446273 GTTGAATCTTGCTATATGCGAATGTAT 58.554 33.333 0.00 0.00 46.63 2.29
71 72 8.189709 TGAATCTTGCTATATGCGAATGTATC 57.810 34.615 0.00 0.00 46.63 2.24
72 73 8.037166 TGAATCTTGCTATATGCGAATGTATCT 58.963 33.333 0.00 0.00 46.63 1.98
73 74 9.521503 GAATCTTGCTATATGCGAATGTATCTA 57.478 33.333 0.00 0.00 46.63 1.98
74 75 9.526713 AATCTTGCTATATGCGAATGTATCTAG 57.473 33.333 0.00 0.00 46.63 2.43
75 76 8.281212 TCTTGCTATATGCGAATGTATCTAGA 57.719 34.615 0.00 0.00 46.63 2.43
76 77 8.907885 TCTTGCTATATGCGAATGTATCTAGAT 58.092 33.333 10.73 10.73 46.63 1.98
77 78 9.526713 CTTGCTATATGCGAATGTATCTAGATT 57.473 33.333 11.25 0.00 46.63 2.40
78 79 9.875691 TTGCTATATGCGAATGTATCTAGATTT 57.124 29.630 11.25 0.00 46.63 2.17
79 80 9.305925 TGCTATATGCGAATGTATCTAGATTTG 57.694 33.333 11.25 0.00 46.63 2.32
80 81 8.272176 GCTATATGCGAATGTATCTAGATTTGC 58.728 37.037 11.25 9.60 43.14 3.68
81 82 9.526713 CTATATGCGAATGTATCTAGATTTGCT 57.473 33.333 11.25 2.73 43.20 3.91
82 83 6.718454 ATGCGAATGTATCTAGATTTGCTC 57.282 37.500 11.25 2.93 43.20 4.26
83 84 4.991056 TGCGAATGTATCTAGATTTGCTCC 59.009 41.667 11.25 0.00 43.20 4.70
84 85 5.221521 TGCGAATGTATCTAGATTTGCTCCT 60.222 40.000 11.25 0.00 43.20 3.69
85 86 5.119898 GCGAATGTATCTAGATTTGCTCCTG 59.880 44.000 11.25 0.00 40.97 3.86
86 87 6.219473 CGAATGTATCTAGATTTGCTCCTGT 58.781 40.000 11.25 0.00 0.00 4.00
87 88 6.703607 CGAATGTATCTAGATTTGCTCCTGTT 59.296 38.462 11.25 0.00 0.00 3.16
88 89 7.225538 CGAATGTATCTAGATTTGCTCCTGTTT 59.774 37.037 11.25 0.00 0.00 2.83
89 90 8.814038 AATGTATCTAGATTTGCTCCTGTTTT 57.186 30.769 11.25 0.00 0.00 2.43
90 91 7.849804 TGTATCTAGATTTGCTCCTGTTTTC 57.150 36.000 11.25 0.00 0.00 2.29
91 92 7.394016 TGTATCTAGATTTGCTCCTGTTTTCA 58.606 34.615 11.25 0.00 0.00 2.69
92 93 6.998968 ATCTAGATTTGCTCCTGTTTTCAG 57.001 37.500 0.00 0.00 46.60 3.02
93 94 3.930634 AGATTTGCTCCTGTTTTCAGC 57.069 42.857 0.00 0.00 45.76 4.26
94 95 2.560105 AGATTTGCTCCTGTTTTCAGCC 59.440 45.455 0.00 0.00 45.76 4.85
95 96 1.774110 TTTGCTCCTGTTTTCAGCCA 58.226 45.000 0.00 0.00 45.76 4.75
96 97 1.774110 TTGCTCCTGTTTTCAGCCAA 58.226 45.000 0.00 0.00 45.76 4.52
97 98 1.032014 TGCTCCTGTTTTCAGCCAAC 58.968 50.000 0.00 0.00 45.76 3.77
98 99 1.032014 GCTCCTGTTTTCAGCCAACA 58.968 50.000 0.00 0.00 45.76 3.33
99 100 1.615392 GCTCCTGTTTTCAGCCAACAT 59.385 47.619 0.00 0.00 45.76 2.71
100 101 2.036346 GCTCCTGTTTTCAGCCAACATT 59.964 45.455 0.00 0.00 45.76 2.71
101 102 3.493176 GCTCCTGTTTTCAGCCAACATTT 60.493 43.478 0.00 0.00 45.76 2.32
102 103 4.696455 CTCCTGTTTTCAGCCAACATTTT 58.304 39.130 0.00 0.00 45.76 1.82
103 104 5.096443 TCCTGTTTTCAGCCAACATTTTT 57.904 34.783 0.00 0.00 45.76 1.94
126 127 7.534085 TTTAATGGCAGATAACTAGAACACG 57.466 36.000 0.00 0.00 0.00 4.49
127 128 5.339008 AATGGCAGATAACTAGAACACGA 57.661 39.130 0.00 0.00 0.00 4.35
128 129 4.371855 TGGCAGATAACTAGAACACGAG 57.628 45.455 0.00 0.00 0.00 4.18
129 130 4.014406 TGGCAGATAACTAGAACACGAGA 58.986 43.478 0.00 0.00 0.00 4.04
130 131 4.461431 TGGCAGATAACTAGAACACGAGAA 59.539 41.667 0.00 0.00 0.00 2.87
131 132 5.047590 TGGCAGATAACTAGAACACGAGAAA 60.048 40.000 0.00 0.00 0.00 2.52
132 133 5.867716 GGCAGATAACTAGAACACGAGAAAA 59.132 40.000 0.00 0.00 0.00 2.29
133 134 6.367969 GGCAGATAACTAGAACACGAGAAAAA 59.632 38.462 0.00 0.00 0.00 1.94
155 156 7.519032 AAAATCCGGTTCAGATAAAACTTCA 57.481 32.000 0.00 0.00 0.00 3.02
156 157 6.496338 AATCCGGTTCAGATAAAACTTCAC 57.504 37.500 0.00 0.00 0.00 3.18
157 158 3.991773 TCCGGTTCAGATAAAACTTCACG 59.008 43.478 0.00 0.00 0.00 4.35
158 159 3.424433 CCGGTTCAGATAAAACTTCACGC 60.424 47.826 0.00 0.00 0.00 5.34
159 160 3.185594 CGGTTCAGATAAAACTTCACGCA 59.814 43.478 0.00 0.00 0.00 5.24
160 161 4.319190 CGGTTCAGATAAAACTTCACGCAA 60.319 41.667 0.00 0.00 0.00 4.85
161 162 5.516090 GGTTCAGATAAAACTTCACGCAAA 58.484 37.500 0.00 0.00 0.00 3.68
162 163 5.398416 GGTTCAGATAAAACTTCACGCAAAC 59.602 40.000 0.00 0.00 0.00 2.93
164 165 4.508492 TCAGATAAAACTTCACGCAAACGA 59.492 37.500 0.00 0.00 43.93 3.85
165 166 4.607235 CAGATAAAACTTCACGCAAACGAC 59.393 41.667 0.00 0.00 43.93 4.34
166 167 2.904011 AAAACTTCACGCAAACGACA 57.096 40.000 0.00 0.00 43.93 4.35
167 168 2.168201 AAACTTCACGCAAACGACAC 57.832 45.000 0.00 0.00 43.93 3.67
168 169 1.080298 AACTTCACGCAAACGACACA 58.920 45.000 0.00 0.00 43.93 3.72
169 170 1.080298 ACTTCACGCAAACGACACAA 58.920 45.000 0.00 0.00 43.93 3.33
170 171 1.465387 ACTTCACGCAAACGACACAAA 59.535 42.857 0.00 0.00 43.93 2.83
171 172 2.096819 ACTTCACGCAAACGACACAAAT 59.903 40.909 0.00 0.00 43.93 2.32
172 173 2.376915 TCACGCAAACGACACAAATC 57.623 45.000 0.00 0.00 43.93 2.17
173 174 1.937223 TCACGCAAACGACACAAATCT 59.063 42.857 0.00 0.00 43.93 2.40
174 175 2.033236 TCACGCAAACGACACAAATCTC 60.033 45.455 0.00 0.00 43.93 2.75
175 176 1.070843 ACGCAAACGACACAAATCTCG 60.071 47.619 0.00 0.00 43.93 4.04
176 177 1.191425 CGCAAACGACACAAATCTCGA 59.809 47.619 0.00 0.00 43.93 4.04
177 178 2.348125 CGCAAACGACACAAATCTCGAA 60.348 45.455 0.00 0.00 43.93 3.71
178 179 3.613563 GCAAACGACACAAATCTCGAAA 58.386 40.909 0.00 0.00 33.96 3.46
179 180 3.417645 GCAAACGACACAAATCTCGAAAC 59.582 43.478 0.00 0.00 33.96 2.78
180 181 4.785341 GCAAACGACACAAATCTCGAAACT 60.785 41.667 0.00 0.00 33.96 2.66
181 182 4.452890 AACGACACAAATCTCGAAACTG 57.547 40.909 0.00 0.00 33.96 3.16
182 183 2.221055 ACGACACAAATCTCGAAACTGC 59.779 45.455 0.00 0.00 33.96 4.40
183 184 2.220824 CGACACAAATCTCGAAACTGCA 59.779 45.455 0.00 0.00 31.24 4.41
184 185 3.120546 CGACACAAATCTCGAAACTGCAT 60.121 43.478 0.00 0.00 31.24 3.96
185 186 4.611355 CGACACAAATCTCGAAACTGCATT 60.611 41.667 0.00 0.00 31.24 3.56
186 187 5.186996 ACACAAATCTCGAAACTGCATTT 57.813 34.783 0.00 0.00 0.00 2.32
187 188 5.215160 ACACAAATCTCGAAACTGCATTTC 58.785 37.500 10.01 10.01 42.96 2.17
188 189 5.009010 ACACAAATCTCGAAACTGCATTTCT 59.991 36.000 15.12 0.00 44.03 2.52
189 190 5.341462 CACAAATCTCGAAACTGCATTTCTG 59.659 40.000 15.12 10.10 44.03 3.02
190 191 5.239306 ACAAATCTCGAAACTGCATTTCTGA 59.761 36.000 15.12 13.39 44.03 3.27
191 192 5.542616 AATCTCGAAACTGCATTTCTGAG 57.457 39.130 20.70 20.70 44.03 3.35
192 193 3.995199 TCTCGAAACTGCATTTCTGAGT 58.005 40.909 22.75 5.53 44.03 3.41
193 194 4.380531 TCTCGAAACTGCATTTCTGAGTT 58.619 39.130 22.75 9.66 44.03 3.01
194 195 4.816385 TCTCGAAACTGCATTTCTGAGTTT 59.184 37.500 22.75 14.93 44.03 2.66
195 196 4.847633 TCGAAACTGCATTTCTGAGTTTG 58.152 39.130 15.12 5.12 44.03 2.93
196 197 4.574421 TCGAAACTGCATTTCTGAGTTTGA 59.426 37.500 15.12 6.72 44.03 2.69
197 198 5.065859 TCGAAACTGCATTTCTGAGTTTGAA 59.934 36.000 15.12 0.00 44.03 2.69
198 199 5.916883 CGAAACTGCATTTCTGAGTTTGAAT 59.083 36.000 15.12 0.00 44.03 2.57
199 200 6.418819 CGAAACTGCATTTCTGAGTTTGAATT 59.581 34.615 15.12 0.00 44.03 2.17
200 201 7.043192 CGAAACTGCATTTCTGAGTTTGAATTT 60.043 33.333 15.12 0.00 44.03 1.82
201 202 8.496707 AAACTGCATTTCTGAGTTTGAATTTT 57.503 26.923 0.00 0.00 38.26 1.82
202 203 8.496707 AACTGCATTTCTGAGTTTGAATTTTT 57.503 26.923 0.00 0.00 0.00 1.94
203 204 8.134905 ACTGCATTTCTGAGTTTGAATTTTTC 57.865 30.769 0.00 0.00 0.00 2.29
204 205 7.983484 ACTGCATTTCTGAGTTTGAATTTTTCT 59.017 29.630 0.00 0.00 0.00 2.52
205 206 8.721019 TGCATTTCTGAGTTTGAATTTTTCTT 57.279 26.923 0.00 0.00 0.00 2.52
206 207 9.165035 TGCATTTCTGAGTTTGAATTTTTCTTT 57.835 25.926 0.00 0.00 0.00 2.52
207 208 9.429600 GCATTTCTGAGTTTGAATTTTTCTTTG 57.570 29.630 0.00 0.00 0.00 2.77
208 209 9.925268 CATTTCTGAGTTTGAATTTTTCTTTGG 57.075 29.630 0.00 0.00 0.00 3.28
209 210 7.538303 TTCTGAGTTTGAATTTTTCTTTGGC 57.462 32.000 0.00 0.00 0.00 4.52
210 211 6.877236 TCTGAGTTTGAATTTTTCTTTGGCT 58.123 32.000 0.00 0.00 0.00 4.75
211 212 6.757947 TCTGAGTTTGAATTTTTCTTTGGCTG 59.242 34.615 0.00 0.00 0.00 4.85
212 213 5.816777 TGAGTTTGAATTTTTCTTTGGCTGG 59.183 36.000 0.00 0.00 0.00 4.85
213 214 5.744171 AGTTTGAATTTTTCTTTGGCTGGT 58.256 33.333 0.00 0.00 0.00 4.00
214 215 5.585844 AGTTTGAATTTTTCTTTGGCTGGTG 59.414 36.000 0.00 0.00 0.00 4.17
215 216 5.350504 TTGAATTTTTCTTTGGCTGGTGA 57.649 34.783 0.00 0.00 0.00 4.02
216 217 5.350504 TGAATTTTTCTTTGGCTGGTGAA 57.649 34.783 0.00 0.00 0.00 3.18
217 218 5.738909 TGAATTTTTCTTTGGCTGGTGAAA 58.261 33.333 0.00 0.00 0.00 2.69
218 219 6.355747 TGAATTTTTCTTTGGCTGGTGAAAT 58.644 32.000 0.00 0.00 0.00 2.17
219 220 7.504403 TGAATTTTTCTTTGGCTGGTGAAATA 58.496 30.769 0.00 0.00 0.00 1.40
220 221 8.156165 TGAATTTTTCTTTGGCTGGTGAAATAT 58.844 29.630 0.00 0.00 0.00 1.28
221 222 7.910441 ATTTTTCTTTGGCTGGTGAAATATG 57.090 32.000 0.00 0.00 0.00 1.78
222 223 6.418057 TTTTCTTTGGCTGGTGAAATATGT 57.582 33.333 0.00 0.00 0.00 2.29
223 224 7.531857 TTTTCTTTGGCTGGTGAAATATGTA 57.468 32.000 0.00 0.00 0.00 2.29
224 225 7.531857 TTTCTTTGGCTGGTGAAATATGTAA 57.468 32.000 0.00 0.00 0.00 2.41
225 226 7.531857 TTCTTTGGCTGGTGAAATATGTAAA 57.468 32.000 0.00 0.00 0.00 2.01
226 227 7.716799 TCTTTGGCTGGTGAAATATGTAAAT 57.283 32.000 0.00 0.00 0.00 1.40
227 228 8.133024 TCTTTGGCTGGTGAAATATGTAAATT 57.867 30.769 0.00 0.00 0.00 1.82
228 229 8.592809 TCTTTGGCTGGTGAAATATGTAAATTT 58.407 29.630 0.00 0.00 0.00 1.82
229 230 8.770438 TTTGGCTGGTGAAATATGTAAATTTC 57.230 30.769 0.00 3.02 43.28 2.17
249 250 8.538409 AATTTCAAAATGAGAACAACTATGGC 57.462 30.769 0.00 0.00 0.00 4.40
250 251 6.647334 TTCAAAATGAGAACAACTATGGCA 57.353 33.333 0.00 0.00 0.00 4.92
251 252 6.258230 TCAAAATGAGAACAACTATGGCAG 57.742 37.500 0.00 0.00 0.00 4.85
252 253 6.003326 TCAAAATGAGAACAACTATGGCAGA 58.997 36.000 0.00 0.00 0.00 4.26
253 254 6.660521 TCAAAATGAGAACAACTATGGCAGAT 59.339 34.615 0.00 0.00 0.00 2.90
254 255 7.177216 TCAAAATGAGAACAACTATGGCAGATT 59.823 33.333 0.00 0.00 0.00 2.40
255 256 6.690194 AATGAGAACAACTATGGCAGATTC 57.310 37.500 0.00 0.00 0.00 2.52
256 257 4.183865 TGAGAACAACTATGGCAGATTCG 58.816 43.478 0.00 0.00 0.00 3.34
257 258 4.184629 GAGAACAACTATGGCAGATTCGT 58.815 43.478 0.00 0.00 0.00 3.85
258 259 4.184629 AGAACAACTATGGCAGATTCGTC 58.815 43.478 0.00 0.00 0.00 4.20
259 260 3.895232 ACAACTATGGCAGATTCGTCT 57.105 42.857 0.00 0.00 0.00 4.18
260 261 3.525537 ACAACTATGGCAGATTCGTCTG 58.474 45.455 0.00 1.17 40.51 3.51
261 262 3.195610 ACAACTATGGCAGATTCGTCTGA 59.804 43.478 9.47 0.00 39.99 3.27
262 263 4.141846 ACAACTATGGCAGATTCGTCTGAT 60.142 41.667 9.47 0.00 39.99 2.90
263 264 4.679373 ACTATGGCAGATTCGTCTGATT 57.321 40.909 9.47 0.00 39.99 2.57
264 265 4.626042 ACTATGGCAGATTCGTCTGATTC 58.374 43.478 9.47 0.00 39.99 2.52
265 266 3.834489 ATGGCAGATTCGTCTGATTCT 57.166 42.857 9.47 0.00 39.99 2.40
266 267 3.170791 TGGCAGATTCGTCTGATTCTC 57.829 47.619 9.47 0.00 39.99 2.87
267 268 2.159043 TGGCAGATTCGTCTGATTCTCC 60.159 50.000 9.47 1.69 39.99 3.71
268 269 2.123342 GCAGATTCGTCTGATTCTCCG 58.877 52.381 9.47 0.00 39.99 4.63
269 270 2.480416 GCAGATTCGTCTGATTCTCCGT 60.480 50.000 9.47 0.00 39.99 4.69
270 271 3.775202 CAGATTCGTCTGATTCTCCGTT 58.225 45.455 0.00 0.00 39.99 4.44
271 272 4.177026 CAGATTCGTCTGATTCTCCGTTT 58.823 43.478 0.00 0.00 39.99 3.60
272 273 4.266502 CAGATTCGTCTGATTCTCCGTTTC 59.733 45.833 0.00 0.00 39.99 2.78
273 274 3.936372 TTCGTCTGATTCTCCGTTTCT 57.064 42.857 0.00 0.00 0.00 2.52
274 275 3.936372 TCGTCTGATTCTCCGTTTCTT 57.064 42.857 0.00 0.00 0.00 2.52
275 276 3.575630 TCGTCTGATTCTCCGTTTCTTG 58.424 45.455 0.00 0.00 0.00 3.02
276 277 3.005472 TCGTCTGATTCTCCGTTTCTTGT 59.995 43.478 0.00 0.00 0.00 3.16
277 278 3.741344 CGTCTGATTCTCCGTTTCTTGTT 59.259 43.478 0.00 0.00 0.00 2.83
278 279 4.376413 CGTCTGATTCTCCGTTTCTTGTTG 60.376 45.833 0.00 0.00 0.00 3.33
279 280 3.498397 TCTGATTCTCCGTTTCTTGTTGC 59.502 43.478 0.00 0.00 0.00 4.17
280 281 2.552315 TGATTCTCCGTTTCTTGTTGCC 59.448 45.455 0.00 0.00 0.00 4.52
281 282 2.045561 TTCTCCGTTTCTTGTTGCCA 57.954 45.000 0.00 0.00 0.00 4.92
282 283 1.593196 TCTCCGTTTCTTGTTGCCAG 58.407 50.000 0.00 0.00 0.00 4.85
283 284 0.040067 CTCCGTTTCTTGTTGCCAGC 60.040 55.000 0.00 0.00 0.00 4.85
284 285 0.749818 TCCGTTTCTTGTTGCCAGCA 60.750 50.000 0.00 0.00 0.00 4.41
285 286 0.318107 CCGTTTCTTGTTGCCAGCAG 60.318 55.000 0.00 0.00 0.00 4.24
286 287 0.381801 CGTTTCTTGTTGCCAGCAGT 59.618 50.000 0.00 0.00 0.00 4.40
287 288 1.597937 CGTTTCTTGTTGCCAGCAGTC 60.598 52.381 0.00 0.00 0.00 3.51
288 289 0.662619 TTTCTTGTTGCCAGCAGTCG 59.337 50.000 0.00 0.00 0.00 4.18
289 290 0.179059 TTCTTGTTGCCAGCAGTCGA 60.179 50.000 0.00 0.00 0.00 4.20
290 291 0.601046 TCTTGTTGCCAGCAGTCGAG 60.601 55.000 0.00 0.76 0.00 4.04
291 292 0.882042 CTTGTTGCCAGCAGTCGAGT 60.882 55.000 0.00 0.00 0.00 4.18
292 293 0.880278 TTGTTGCCAGCAGTCGAGTC 60.880 55.000 0.00 0.00 0.00 3.36
293 294 2.029844 GTTGCCAGCAGTCGAGTCC 61.030 63.158 0.00 0.00 0.00 3.85
294 295 2.506957 TTGCCAGCAGTCGAGTCCA 61.507 57.895 0.00 0.00 0.00 4.02
295 296 1.830587 TTGCCAGCAGTCGAGTCCAT 61.831 55.000 0.00 0.00 0.00 3.41
296 297 0.970427 TGCCAGCAGTCGAGTCCATA 60.970 55.000 0.00 0.00 0.00 2.74
297 298 0.390860 GCCAGCAGTCGAGTCCATAT 59.609 55.000 0.00 0.00 0.00 1.78
298 299 1.202580 GCCAGCAGTCGAGTCCATATT 60.203 52.381 0.00 0.00 0.00 1.28
299 300 2.035961 GCCAGCAGTCGAGTCCATATTA 59.964 50.000 0.00 0.00 0.00 0.98
300 301 3.643763 CCAGCAGTCGAGTCCATATTAC 58.356 50.000 0.00 0.00 0.00 1.89
301 302 3.319405 CCAGCAGTCGAGTCCATATTACT 59.681 47.826 0.00 0.00 0.00 2.24
302 303 4.202161 CCAGCAGTCGAGTCCATATTACTT 60.202 45.833 0.00 0.00 0.00 2.24
303 304 4.742167 CAGCAGTCGAGTCCATATTACTTG 59.258 45.833 0.00 0.00 0.00 3.16
304 305 3.491267 GCAGTCGAGTCCATATTACTTGC 59.509 47.826 0.00 0.00 0.00 4.01
305 306 4.682787 CAGTCGAGTCCATATTACTTGCA 58.317 43.478 0.00 0.00 0.00 4.08
306 307 5.292765 CAGTCGAGTCCATATTACTTGCAT 58.707 41.667 0.00 0.00 0.00 3.96
307 308 5.755375 CAGTCGAGTCCATATTACTTGCATT 59.245 40.000 0.00 0.00 0.00 3.56
308 309 5.755375 AGTCGAGTCCATATTACTTGCATTG 59.245 40.000 0.00 0.00 0.00 2.82
309 310 5.523916 GTCGAGTCCATATTACTTGCATTGT 59.476 40.000 0.00 0.00 0.00 2.71
310 311 5.523552 TCGAGTCCATATTACTTGCATTGTG 59.476 40.000 0.00 0.00 0.00 3.33
311 312 5.294306 CGAGTCCATATTACTTGCATTGTGT 59.706 40.000 0.00 0.00 0.00 3.72
312 313 6.183360 CGAGTCCATATTACTTGCATTGTGTT 60.183 38.462 0.00 0.00 0.00 3.32
313 314 7.466746 AGTCCATATTACTTGCATTGTGTTT 57.533 32.000 0.00 0.00 0.00 2.83
314 315 7.895759 AGTCCATATTACTTGCATTGTGTTTT 58.104 30.769 0.00 0.00 0.00 2.43
315 316 9.019656 AGTCCATATTACTTGCATTGTGTTTTA 57.980 29.630 0.00 0.00 0.00 1.52
316 317 9.072294 GTCCATATTACTTGCATTGTGTTTTAC 57.928 33.333 0.00 0.00 0.00 2.01
317 318 9.019656 TCCATATTACTTGCATTGTGTTTTACT 57.980 29.630 0.00 0.00 0.00 2.24
318 319 9.638239 CCATATTACTTGCATTGTGTTTTACTT 57.362 29.630 0.00 0.00 0.00 2.24
320 321 7.945033 ATTACTTGCATTGTGTTTTACTTGG 57.055 32.000 0.00 0.00 0.00 3.61
321 322 4.692228 ACTTGCATTGTGTTTTACTTGGG 58.308 39.130 0.00 0.00 0.00 4.12
322 323 3.742433 TGCATTGTGTTTTACTTGGGG 57.258 42.857 0.00 0.00 0.00 4.96
323 324 3.034635 TGCATTGTGTTTTACTTGGGGT 58.965 40.909 0.00 0.00 0.00 4.95
324 325 3.452627 TGCATTGTGTTTTACTTGGGGTT 59.547 39.130 0.00 0.00 0.00 4.11
325 326 4.055360 GCATTGTGTTTTACTTGGGGTTC 58.945 43.478 0.00 0.00 0.00 3.62
326 327 4.295051 CATTGTGTTTTACTTGGGGTTCG 58.705 43.478 0.00 0.00 0.00 3.95
327 328 2.299521 TGTGTTTTACTTGGGGTTCGG 58.700 47.619 0.00 0.00 0.00 4.30
328 329 1.610038 GTGTTTTACTTGGGGTTCGGG 59.390 52.381 0.00 0.00 0.00 5.14
329 330 0.599558 GTTTTACTTGGGGTTCGGGC 59.400 55.000 0.00 0.00 0.00 6.13
330 331 0.479378 TTTTACTTGGGGTTCGGGCT 59.521 50.000 0.00 0.00 0.00 5.19
331 332 0.250989 TTTACTTGGGGTTCGGGCTG 60.251 55.000 0.00 0.00 0.00 4.85
332 333 1.420532 TTACTTGGGGTTCGGGCTGT 61.421 55.000 0.00 0.00 0.00 4.40
333 334 1.833787 TACTTGGGGTTCGGGCTGTC 61.834 60.000 0.00 0.00 0.00 3.51
334 335 3.172106 TTGGGGTTCGGGCTGTCA 61.172 61.111 0.00 0.00 0.00 3.58
335 336 2.484287 CTTGGGGTTCGGGCTGTCAT 62.484 60.000 0.00 0.00 0.00 3.06
336 337 2.124695 GGGGTTCGGGCTGTCATC 60.125 66.667 0.00 0.00 0.00 2.92
337 338 2.511600 GGGTTCGGGCTGTCATCG 60.512 66.667 0.00 0.00 0.00 3.84
338 339 2.264794 GGTTCGGGCTGTCATCGT 59.735 61.111 0.00 0.00 0.00 3.73
339 340 2.100631 GGTTCGGGCTGTCATCGTG 61.101 63.158 0.00 0.00 0.00 4.35
340 341 1.374252 GTTCGGGCTGTCATCGTGT 60.374 57.895 0.00 0.00 0.00 4.49
341 342 0.108992 GTTCGGGCTGTCATCGTGTA 60.109 55.000 0.00 0.00 0.00 2.90
342 343 0.821517 TTCGGGCTGTCATCGTGTAT 59.178 50.000 0.00 0.00 0.00 2.29
343 344 0.821517 TCGGGCTGTCATCGTGTATT 59.178 50.000 0.00 0.00 0.00 1.89
344 345 0.930310 CGGGCTGTCATCGTGTATTG 59.070 55.000 0.00 0.00 0.00 1.90
345 346 1.739035 CGGGCTGTCATCGTGTATTGT 60.739 52.381 0.00 0.00 0.00 2.71
346 347 2.356135 GGGCTGTCATCGTGTATTGTT 58.644 47.619 0.00 0.00 0.00 2.83
347 348 2.351726 GGGCTGTCATCGTGTATTGTTC 59.648 50.000 0.00 0.00 0.00 3.18
348 349 3.000041 GGCTGTCATCGTGTATTGTTCA 59.000 45.455 0.00 0.00 0.00 3.18
349 350 3.181520 GGCTGTCATCGTGTATTGTTCAC 60.182 47.826 0.00 0.00 0.00 3.18
364 365 2.536761 TTCACGGTGAACCACTAAGG 57.463 50.000 19.07 0.00 45.67 2.69
376 377 3.099267 CCACTAAGGTTCTATGCGAGG 57.901 52.381 0.00 0.00 0.00 4.63
377 378 2.431057 CCACTAAGGTTCTATGCGAGGT 59.569 50.000 0.00 0.00 0.00 3.85
378 379 3.491104 CCACTAAGGTTCTATGCGAGGTC 60.491 52.174 0.00 0.00 0.00 3.85
379 380 2.358267 ACTAAGGTTCTATGCGAGGTCG 59.642 50.000 0.00 0.00 43.27 4.79
380 381 1.471119 AAGGTTCTATGCGAGGTCGA 58.529 50.000 2.94 0.00 43.02 4.20
381 382 0.739561 AGGTTCTATGCGAGGTCGAC 59.260 55.000 7.13 7.13 43.02 4.20
382 383 0.739561 GGTTCTATGCGAGGTCGACT 59.260 55.000 16.46 0.90 43.02 4.18
383 384 1.268640 GGTTCTATGCGAGGTCGACTC 60.269 57.143 16.46 9.94 43.02 3.36
384 385 1.022735 TTCTATGCGAGGTCGACTCC 58.977 55.000 16.46 6.59 43.57 3.85
385 386 0.107361 TCTATGCGAGGTCGACTCCA 60.107 55.000 16.46 10.88 43.57 3.86
386 387 0.029567 CTATGCGAGGTCGACTCCAC 59.970 60.000 16.46 3.96 43.57 4.02
387 388 1.712018 TATGCGAGGTCGACTCCACG 61.712 60.000 16.46 11.35 43.57 4.94
388 389 3.429141 GCGAGGTCGACTCCACGA 61.429 66.667 16.46 0.00 43.57 4.35
389 390 2.974489 GCGAGGTCGACTCCACGAA 61.974 63.158 16.46 0.00 43.57 3.85
390 391 1.577922 CGAGGTCGACTCCACGAAA 59.422 57.895 16.46 0.00 43.57 3.46
391 392 0.728466 CGAGGTCGACTCCACGAAAC 60.728 60.000 16.46 0.00 43.57 2.78
392 393 0.313043 GAGGTCGACTCCACGAAACA 59.687 55.000 16.46 0.00 43.75 2.83
393 394 0.031721 AGGTCGACTCCACGAAACAC 59.968 55.000 16.46 0.00 43.75 3.32
394 395 0.249155 GGTCGACTCCACGAAACACA 60.249 55.000 16.46 0.00 43.75 3.72
395 396 0.850856 GTCGACTCCACGAAACACAC 59.149 55.000 8.70 0.00 43.75 3.82
396 397 0.456628 TCGACTCCACGAAACACACA 59.543 50.000 0.00 0.00 39.34 3.72
397 398 0.852777 CGACTCCACGAAACACACAG 59.147 55.000 0.00 0.00 35.09 3.66
398 399 0.582005 GACTCCACGAAACACACAGC 59.418 55.000 0.00 0.00 0.00 4.40
399 400 0.107897 ACTCCACGAAACACACAGCA 60.108 50.000 0.00 0.00 0.00 4.41
400 401 1.229428 CTCCACGAAACACACAGCAT 58.771 50.000 0.00 0.00 0.00 3.79
401 402 1.195448 CTCCACGAAACACACAGCATC 59.805 52.381 0.00 0.00 0.00 3.91
402 403 0.238289 CCACGAAACACACAGCATCC 59.762 55.000 0.00 0.00 0.00 3.51
403 404 0.943673 CACGAAACACACAGCATCCA 59.056 50.000 0.00 0.00 0.00 3.41
404 405 0.944386 ACGAAACACACAGCATCCAC 59.056 50.000 0.00 0.00 0.00 4.02
405 406 0.238289 CGAAACACACAGCATCCACC 59.762 55.000 0.00 0.00 0.00 4.61
406 407 0.238289 GAAACACACAGCATCCACCG 59.762 55.000 0.00 0.00 0.00 4.94
407 408 1.795170 AAACACACAGCATCCACCGC 61.795 55.000 0.00 0.00 0.00 5.68
408 409 3.434319 CACACAGCATCCACCGCC 61.434 66.667 0.00 0.00 0.00 6.13
409 410 3.640407 ACACAGCATCCACCGCCT 61.640 61.111 0.00 0.00 0.00 5.52
410 411 2.821366 CACAGCATCCACCGCCTC 60.821 66.667 0.00 0.00 0.00 4.70
411 412 4.101448 ACAGCATCCACCGCCTCC 62.101 66.667 0.00 0.00 0.00 4.30
412 413 3.790437 CAGCATCCACCGCCTCCT 61.790 66.667 0.00 0.00 0.00 3.69
413 414 3.474570 AGCATCCACCGCCTCCTC 61.475 66.667 0.00 0.00 0.00 3.71
414 415 3.474570 GCATCCACCGCCTCCTCT 61.475 66.667 0.00 0.00 0.00 3.69
415 416 2.818132 CATCCACCGCCTCCTCTC 59.182 66.667 0.00 0.00 0.00 3.20
416 417 2.444895 ATCCACCGCCTCCTCTCC 60.445 66.667 0.00 0.00 0.00 3.71
417 418 4.779733 TCCACCGCCTCCTCTCCC 62.780 72.222 0.00 0.00 0.00 4.30
419 420 3.003173 CACCGCCTCCTCTCCCAA 61.003 66.667 0.00 0.00 0.00 4.12
420 421 2.685380 ACCGCCTCCTCTCCCAAG 60.685 66.667 0.00 0.00 0.00 3.61
421 422 2.364317 CCGCCTCCTCTCCCAAGA 60.364 66.667 0.00 0.00 0.00 3.02
422 423 1.990060 CCGCCTCCTCTCCCAAGAA 60.990 63.158 0.00 0.00 0.00 2.52
423 424 1.553690 CCGCCTCCTCTCCCAAGAAA 61.554 60.000 0.00 0.00 0.00 2.52
424 425 0.324943 CGCCTCCTCTCCCAAGAAAA 59.675 55.000 0.00 0.00 0.00 2.29
425 426 1.271379 CGCCTCCTCTCCCAAGAAAAA 60.271 52.381 0.00 0.00 0.00 1.94
441 442 0.327259 AAAAAGGGTAGGGTCTCCGC 59.673 55.000 0.00 0.00 38.33 5.54
442 443 1.559965 AAAAGGGTAGGGTCTCCGCC 61.560 60.000 0.00 0.00 38.33 6.13
443 444 2.472607 AAAGGGTAGGGTCTCCGCCT 62.473 60.000 0.00 0.00 38.33 5.52
444 445 1.587522 AAGGGTAGGGTCTCCGCCTA 61.588 60.000 0.00 0.00 38.33 3.93
445 446 1.075748 GGGTAGGGTCTCCGCCTAA 60.076 63.158 0.00 0.00 38.33 2.69
446 447 1.114119 GGGTAGGGTCTCCGCCTAAG 61.114 65.000 0.00 0.00 38.33 2.18
447 448 1.114119 GGTAGGGTCTCCGCCTAAGG 61.114 65.000 0.00 0.00 38.33 2.69
448 449 1.114119 GTAGGGTCTCCGCCTAAGGG 61.114 65.000 0.00 0.00 38.33 3.95
449 450 1.291459 TAGGGTCTCCGCCTAAGGGA 61.291 60.000 0.00 0.00 38.33 4.20
450 451 1.459730 GGGTCTCCGCCTAAGGGAT 60.460 63.158 0.00 0.00 31.99 3.85
451 452 1.473497 GGGTCTCCGCCTAAGGGATC 61.473 65.000 0.00 0.00 31.99 3.36
452 453 0.470268 GGTCTCCGCCTAAGGGATCT 60.470 60.000 0.00 0.00 31.99 2.75
453 454 0.676736 GTCTCCGCCTAAGGGATCTG 59.323 60.000 0.00 0.00 31.99 2.90
454 455 1.115930 TCTCCGCCTAAGGGATCTGC 61.116 60.000 0.00 0.00 31.99 4.26
455 456 2.105806 CTCCGCCTAAGGGATCTGCC 62.106 65.000 0.00 0.00 31.99 4.85
456 457 2.029666 CGCCTAAGGGATCTGCCG 59.970 66.667 0.00 0.00 37.63 5.69
457 458 2.797278 CGCCTAAGGGATCTGCCGT 61.797 63.158 0.00 0.00 37.63 5.68
458 459 1.069935 GCCTAAGGGATCTGCCGTC 59.930 63.158 0.00 0.00 37.63 4.79
459 460 1.686325 GCCTAAGGGATCTGCCGTCA 61.686 60.000 0.00 0.00 37.63 4.35
460 461 0.105039 CCTAAGGGATCTGCCGTCAC 59.895 60.000 0.00 0.00 37.63 3.67
461 462 0.105039 CTAAGGGATCTGCCGTCACC 59.895 60.000 0.00 0.00 37.63 4.02
462 463 1.672854 TAAGGGATCTGCCGTCACCG 61.673 60.000 0.00 0.00 37.63 4.94
472 473 4.430765 CGTCACCGGTTCCCCTCG 62.431 72.222 2.97 0.00 0.00 4.63
473 474 4.754667 GTCACCGGTTCCCCTCGC 62.755 72.222 2.97 0.00 0.00 5.03
477 478 4.468689 CCGGTTCCCCTCGCCTTC 62.469 72.222 0.00 0.00 0.00 3.46
478 479 4.814294 CGGTTCCCCTCGCCTTCG 62.814 72.222 0.00 0.00 0.00 3.79
479 480 4.468689 GGTTCCCCTCGCCTTCGG 62.469 72.222 0.00 0.00 36.13 4.30
480 481 4.468689 GTTCCCCTCGCCTTCGGG 62.469 72.222 0.00 0.00 40.29 5.14
486 487 4.394712 CTCGCCTTCGGGTGCCTT 62.395 66.667 0.00 0.00 44.74 4.35
487 488 3.901797 CTCGCCTTCGGGTGCCTTT 62.902 63.158 0.00 0.00 44.74 3.11
488 489 2.983592 CGCCTTCGGGTGCCTTTT 60.984 61.111 0.00 0.00 38.89 2.27
489 490 2.650778 GCCTTCGGGTGCCTTTTG 59.349 61.111 0.00 0.00 37.45 2.44
490 491 2.931068 GCCTTCGGGTGCCTTTTGG 61.931 63.158 0.00 0.00 39.08 3.28
491 492 1.530655 CCTTCGGGTGCCTTTTGGT 60.531 57.895 0.00 0.00 42.99 3.67
492 493 0.250989 CCTTCGGGTGCCTTTTGGTA 60.251 55.000 0.00 0.00 42.99 3.25
500 501 2.214376 TGCCTTTTGGTACCCATGAG 57.786 50.000 10.07 2.16 42.99 2.90
501 502 1.272425 TGCCTTTTGGTACCCATGAGG 60.272 52.381 10.07 12.25 42.99 3.86
511 512 3.978164 CCATGAGGGGAGGGAGAC 58.022 66.667 0.00 0.00 0.00 3.36
528 529 2.928396 CCCGGGTCAGGGTTGTCT 60.928 66.667 14.18 0.00 46.38 3.41
529 530 1.611261 CCCGGGTCAGGGTTGTCTA 60.611 63.158 14.18 0.00 46.38 2.59
530 531 0.981277 CCCGGGTCAGGGTTGTCTAT 60.981 60.000 14.18 0.00 46.38 1.98
531 532 0.178068 CCGGGTCAGGGTTGTCTATG 59.822 60.000 0.00 0.00 0.00 2.23
532 533 0.902531 CGGGTCAGGGTTGTCTATGT 59.097 55.000 0.00 0.00 0.00 2.29
533 534 2.104967 CGGGTCAGGGTTGTCTATGTA 58.895 52.381 0.00 0.00 0.00 2.29
534 535 2.100916 CGGGTCAGGGTTGTCTATGTAG 59.899 54.545 0.00 0.00 0.00 2.74
535 536 3.105283 GGGTCAGGGTTGTCTATGTAGT 58.895 50.000 0.00 0.00 0.00 2.73
536 537 3.132467 GGGTCAGGGTTGTCTATGTAGTC 59.868 52.174 0.00 0.00 0.00 2.59
537 538 4.024670 GGTCAGGGTTGTCTATGTAGTCT 58.975 47.826 0.00 0.00 0.00 3.24
538 539 4.466726 GGTCAGGGTTGTCTATGTAGTCTT 59.533 45.833 0.00 0.00 0.00 3.01
539 540 5.655532 GGTCAGGGTTGTCTATGTAGTCTTA 59.344 44.000 0.00 0.00 0.00 2.10
540 541 6.183360 GGTCAGGGTTGTCTATGTAGTCTTAG 60.183 46.154 0.00 0.00 0.00 2.18
541 542 5.892119 TCAGGGTTGTCTATGTAGTCTTAGG 59.108 44.000 0.00 0.00 0.00 2.69
542 543 5.657302 CAGGGTTGTCTATGTAGTCTTAGGT 59.343 44.000 0.00 0.00 0.00 3.08
543 544 5.892686 AGGGTTGTCTATGTAGTCTTAGGTC 59.107 44.000 0.00 0.00 0.00 3.85
544 545 5.655532 GGGTTGTCTATGTAGTCTTAGGTCA 59.344 44.000 0.00 0.00 0.00 4.02
545 546 6.405619 GGGTTGTCTATGTAGTCTTAGGTCAC 60.406 46.154 0.00 0.00 0.00 3.67
546 547 6.377712 GGTTGTCTATGTAGTCTTAGGTCACT 59.622 42.308 0.00 0.00 0.00 3.41
547 548 7.415429 GGTTGTCTATGTAGTCTTAGGTCACTC 60.415 44.444 0.00 0.00 0.00 3.51
548 549 6.959904 TGTCTATGTAGTCTTAGGTCACTCT 58.040 40.000 0.00 0.00 0.00 3.24
549 550 8.087303 TGTCTATGTAGTCTTAGGTCACTCTA 57.913 38.462 0.00 0.00 0.00 2.43
550 551 8.205512 TGTCTATGTAGTCTTAGGTCACTCTAG 58.794 40.741 0.00 0.00 0.00 2.43
551 552 8.206189 GTCTATGTAGTCTTAGGTCACTCTAGT 58.794 40.741 0.00 0.00 0.00 2.57
552 553 8.770322 TCTATGTAGTCTTAGGTCACTCTAGTT 58.230 37.037 0.00 0.00 0.00 2.24
553 554 9.398538 CTATGTAGTCTTAGGTCACTCTAGTTT 57.601 37.037 0.00 0.00 0.00 2.66
554 555 8.653036 ATGTAGTCTTAGGTCACTCTAGTTTT 57.347 34.615 0.00 0.00 0.00 2.43
555 556 8.108551 TGTAGTCTTAGGTCACTCTAGTTTTC 57.891 38.462 0.00 0.00 0.00 2.29
556 557 7.722728 TGTAGTCTTAGGTCACTCTAGTTTTCA 59.277 37.037 0.00 0.00 0.00 2.69
557 558 7.784470 AGTCTTAGGTCACTCTAGTTTTCAT 57.216 36.000 0.00 0.00 0.00 2.57
558 559 8.196378 AGTCTTAGGTCACTCTAGTTTTCATT 57.804 34.615 0.00 0.00 0.00 2.57
559 560 9.310449 AGTCTTAGGTCACTCTAGTTTTCATTA 57.690 33.333 0.00 0.00 0.00 1.90
560 561 9.356433 GTCTTAGGTCACTCTAGTTTTCATTAC 57.644 37.037 0.00 0.00 0.00 1.89
561 562 8.242053 TCTTAGGTCACTCTAGTTTTCATTACG 58.758 37.037 0.00 0.00 0.00 3.18
562 563 5.721232 AGGTCACTCTAGTTTTCATTACGG 58.279 41.667 0.00 0.00 0.00 4.02
563 564 5.245526 AGGTCACTCTAGTTTTCATTACGGT 59.754 40.000 0.00 0.00 0.00 4.83
564 565 5.930569 GGTCACTCTAGTTTTCATTACGGTT 59.069 40.000 0.00 0.00 0.00 4.44
565 566 7.039504 AGGTCACTCTAGTTTTCATTACGGTTA 60.040 37.037 0.00 0.00 0.00 2.85
566 567 7.599998 GGTCACTCTAGTTTTCATTACGGTTAA 59.400 37.037 0.00 0.00 0.00 2.01
567 568 8.645487 GTCACTCTAGTTTTCATTACGGTTAAG 58.355 37.037 0.00 0.00 0.00 1.85
577 578 5.969423 TCATTACGGTTAAGTCTAGGGTTG 58.031 41.667 0.00 0.00 0.00 3.77
583 584 7.191593 ACGGTTAAGTCTAGGGTTGATTATT 57.808 36.000 0.00 0.00 0.00 1.40
604 605 0.550914 TTTTGCCCTCAGTGGTGTCT 59.449 50.000 0.00 0.00 0.00 3.41
651 652 2.287788 CGAATTGTGCTCAGTTTTGCCT 60.288 45.455 0.00 0.00 0.00 4.75
698 699 0.387929 TGAACTCTGCCGTCTTCGTT 59.612 50.000 0.00 0.00 35.01 3.85
737 738 1.683441 CCCTTACAGGTGGGACCAC 59.317 63.158 13.03 13.03 46.15 4.16
767 768 6.591834 CAGAGACGACCAATTTTATTCAGACT 59.408 38.462 0.00 0.00 0.00 3.24
909 916 2.109739 GGCGAGAGAGAGAGCACGA 61.110 63.158 0.00 0.00 0.00 4.35
960 967 0.324943 GTGGGAAGCTAGCAGTGGAA 59.675 55.000 18.83 0.00 0.00 3.53
1010 1017 1.988107 TCCAAGCTCCATGTCTTCCTT 59.012 47.619 0.00 0.00 0.00 3.36
1149 1156 0.169672 ATCGTCCGTTCTACGTGTGG 59.830 55.000 0.00 0.00 40.58 4.17
1240 1247 2.929641 TCTGTTTGGTGTTCATGCAGA 58.070 42.857 0.00 0.00 35.60 4.26
1440 1447 6.441088 AGGATGTTGAAGAAGAAGGTTAGT 57.559 37.500 0.00 0.00 0.00 2.24
1529 1536 2.805671 TCGCACTGGTTGTAATGTTGAG 59.194 45.455 0.00 0.00 0.00 3.02
1553 1560 6.769822 AGAATGTATGGAAAGGCATGAACTAG 59.230 38.462 0.00 0.00 0.00 2.57
1719 1734 5.654603 TTGATCAATGAAATGCAGCTCTT 57.345 34.783 3.38 0.00 0.00 2.85
1895 1914 7.592885 AGGCAGTAAATCATAATGCTGAAAT 57.407 32.000 7.67 0.00 38.42 2.17
2043 2063 0.332972 TGCCTCAGCTCTGGTAGAGA 59.667 55.000 9.89 0.00 45.07 3.10
2068 2089 7.540474 TTTACACCTGGTGCCAAAATAAATA 57.460 32.000 26.20 4.66 36.98 1.40
2168 2197 2.273179 CGACTGGGGACTCGAACCA 61.273 63.158 9.91 4.55 30.23 3.67
2198 2347 1.334160 GGGTTTGTGGTGTTTAGGGG 58.666 55.000 0.00 0.00 0.00 4.79
2235 2384 4.383118 GCTAGGACAGATGGCAAGACTTTA 60.383 45.833 0.00 0.00 0.00 1.85
2338 2566 3.135994 GCGTGAGAGTGGTTTTCCTTTA 58.864 45.455 0.00 0.00 41.38 1.85
2429 2659 2.441750 AGAGTGGCACTTGGTTTAAGGA 59.558 45.455 22.98 0.00 40.84 3.36
2449 2679 3.826729 GGATTAGAGTGGCACTTGGTTTT 59.173 43.478 22.98 5.07 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 8.417780 AGATACATTCGCATATAGCAAGATTC 57.582 34.615 0.00 0.00 46.13 2.52
48 49 9.526713 CTAGATACATTCGCATATAGCAAGATT 57.473 33.333 0.00 0.00 46.13 2.40
49 50 8.907885 TCTAGATACATTCGCATATAGCAAGAT 58.092 33.333 0.00 0.00 46.13 2.40
50 51 8.281212 TCTAGATACATTCGCATATAGCAAGA 57.719 34.615 0.00 0.00 46.13 3.02
51 52 9.526713 AATCTAGATACATTCGCATATAGCAAG 57.473 33.333 5.46 0.00 46.13 4.01
52 53 9.875691 AAATCTAGATACATTCGCATATAGCAA 57.124 29.630 5.46 0.00 46.13 3.91
53 54 9.305925 CAAATCTAGATACATTCGCATATAGCA 57.694 33.333 5.46 0.00 46.13 3.49
54 55 8.272176 GCAAATCTAGATACATTCGCATATAGC 58.728 37.037 5.46 0.00 40.87 2.97
55 56 9.526713 AGCAAATCTAGATACATTCGCATATAG 57.473 33.333 5.46 0.00 0.00 1.31
56 57 9.521503 GAGCAAATCTAGATACATTCGCATATA 57.478 33.333 5.46 0.00 0.00 0.86
57 58 7.493971 GGAGCAAATCTAGATACATTCGCATAT 59.506 37.037 5.46 0.00 0.00 1.78
58 59 6.813649 GGAGCAAATCTAGATACATTCGCATA 59.186 38.462 5.46 0.00 0.00 3.14
59 60 5.641209 GGAGCAAATCTAGATACATTCGCAT 59.359 40.000 5.46 0.00 0.00 4.73
60 61 4.991056 GGAGCAAATCTAGATACATTCGCA 59.009 41.667 5.46 0.00 0.00 5.10
61 62 5.119898 CAGGAGCAAATCTAGATACATTCGC 59.880 44.000 5.46 3.13 0.00 4.70
62 63 6.219473 ACAGGAGCAAATCTAGATACATTCG 58.781 40.000 5.46 0.00 0.00 3.34
63 64 8.443953 AAACAGGAGCAAATCTAGATACATTC 57.556 34.615 5.46 2.57 0.00 2.67
64 65 8.814038 AAAACAGGAGCAAATCTAGATACATT 57.186 30.769 5.46 0.00 0.00 2.71
65 66 8.049117 TGAAAACAGGAGCAAATCTAGATACAT 58.951 33.333 5.46 0.00 0.00 2.29
66 67 7.394016 TGAAAACAGGAGCAAATCTAGATACA 58.606 34.615 5.46 0.00 0.00 2.29
67 68 7.466590 GCTGAAAACAGGAGCAAATCTAGATAC 60.467 40.741 5.46 0.00 32.70 2.24
68 69 6.540189 GCTGAAAACAGGAGCAAATCTAGATA 59.460 38.462 5.46 0.00 32.70 1.98
69 70 5.356470 GCTGAAAACAGGAGCAAATCTAGAT 59.644 40.000 0.00 0.00 32.70 1.98
70 71 4.697352 GCTGAAAACAGGAGCAAATCTAGA 59.303 41.667 0.00 0.00 32.70 2.43
71 72 4.142513 GGCTGAAAACAGGAGCAAATCTAG 60.143 45.833 0.00 0.00 34.20 2.43
72 73 3.758554 GGCTGAAAACAGGAGCAAATCTA 59.241 43.478 0.00 0.00 34.20 1.98
73 74 2.560105 GGCTGAAAACAGGAGCAAATCT 59.440 45.455 0.00 0.00 34.20 2.40
74 75 2.297033 TGGCTGAAAACAGGAGCAAATC 59.703 45.455 0.00 0.00 34.20 2.17
75 76 2.318908 TGGCTGAAAACAGGAGCAAAT 58.681 42.857 0.00 0.00 34.20 2.32
76 77 1.774110 TGGCTGAAAACAGGAGCAAA 58.226 45.000 0.00 0.00 34.20 3.68
77 78 1.408702 GTTGGCTGAAAACAGGAGCAA 59.591 47.619 0.00 0.00 34.20 3.91
78 79 1.032014 GTTGGCTGAAAACAGGAGCA 58.968 50.000 0.00 0.00 34.20 4.26
79 80 1.032014 TGTTGGCTGAAAACAGGAGC 58.968 50.000 0.00 0.00 32.71 4.70
80 81 4.326504 AAATGTTGGCTGAAAACAGGAG 57.673 40.909 0.00 0.00 40.64 3.69
81 82 4.751767 AAAATGTTGGCTGAAAACAGGA 57.248 36.364 0.00 0.00 40.64 3.86
100 101 8.447833 CGTGTTCTAGTTATCTGCCATTAAAAA 58.552 33.333 0.00 0.00 0.00 1.94
101 102 7.820386 TCGTGTTCTAGTTATCTGCCATTAAAA 59.180 33.333 0.00 0.00 0.00 1.52
102 103 7.324935 TCGTGTTCTAGTTATCTGCCATTAAA 58.675 34.615 0.00 0.00 0.00 1.52
103 104 6.869695 TCGTGTTCTAGTTATCTGCCATTAA 58.130 36.000 0.00 0.00 0.00 1.40
104 105 6.320418 TCTCGTGTTCTAGTTATCTGCCATTA 59.680 38.462 0.00 0.00 0.00 1.90
105 106 5.127194 TCTCGTGTTCTAGTTATCTGCCATT 59.873 40.000 0.00 0.00 0.00 3.16
106 107 4.645136 TCTCGTGTTCTAGTTATCTGCCAT 59.355 41.667 0.00 0.00 0.00 4.40
107 108 4.014406 TCTCGTGTTCTAGTTATCTGCCA 58.986 43.478 0.00 0.00 0.00 4.92
108 109 4.634184 TCTCGTGTTCTAGTTATCTGCC 57.366 45.455 0.00 0.00 0.00 4.85
109 110 6.946229 TTTTCTCGTGTTCTAGTTATCTGC 57.054 37.500 0.00 0.00 0.00 4.26
130 131 7.865889 GTGAAGTTTTATCTGAACCGGATTTTT 59.134 33.333 9.46 0.00 31.33 1.94
131 132 7.368059 GTGAAGTTTTATCTGAACCGGATTTT 58.632 34.615 9.46 0.00 31.33 1.82
132 133 6.348213 CGTGAAGTTTTATCTGAACCGGATTT 60.348 38.462 9.46 0.00 31.33 2.17
133 134 5.121768 CGTGAAGTTTTATCTGAACCGGATT 59.878 40.000 9.46 0.00 31.33 3.01
134 135 4.630069 CGTGAAGTTTTATCTGAACCGGAT 59.370 41.667 9.46 0.00 33.63 4.18
135 136 3.991773 CGTGAAGTTTTATCTGAACCGGA 59.008 43.478 9.46 0.00 0.00 5.14
136 137 3.424433 GCGTGAAGTTTTATCTGAACCGG 60.424 47.826 0.00 0.00 0.00 5.28
137 138 3.185594 TGCGTGAAGTTTTATCTGAACCG 59.814 43.478 0.00 0.00 0.00 4.44
138 139 4.742438 TGCGTGAAGTTTTATCTGAACC 57.258 40.909 0.00 0.00 0.00 3.62
139 140 5.113529 CGTTTGCGTGAAGTTTTATCTGAAC 59.886 40.000 0.00 0.00 0.00 3.18
140 141 5.006844 TCGTTTGCGTGAAGTTTTATCTGAA 59.993 36.000 0.00 0.00 39.49 3.02
141 142 4.508492 TCGTTTGCGTGAAGTTTTATCTGA 59.492 37.500 0.00 0.00 39.49 3.27
142 143 4.607235 GTCGTTTGCGTGAAGTTTTATCTG 59.393 41.667 0.00 0.00 39.49 2.90
143 144 4.271533 TGTCGTTTGCGTGAAGTTTTATCT 59.728 37.500 0.00 0.00 39.49 1.98
144 145 4.374828 GTGTCGTTTGCGTGAAGTTTTATC 59.625 41.667 0.00 0.00 39.49 1.75
145 146 4.201832 TGTGTCGTTTGCGTGAAGTTTTAT 60.202 37.500 0.00 0.00 39.49 1.40
146 147 3.124806 TGTGTCGTTTGCGTGAAGTTTTA 59.875 39.130 0.00 0.00 39.49 1.52
147 148 2.095668 TGTGTCGTTTGCGTGAAGTTTT 60.096 40.909 0.00 0.00 39.49 2.43
148 149 1.465387 TGTGTCGTTTGCGTGAAGTTT 59.535 42.857 0.00 0.00 39.49 2.66
149 150 1.080298 TGTGTCGTTTGCGTGAAGTT 58.920 45.000 0.00 0.00 39.49 2.66
150 151 1.080298 TTGTGTCGTTTGCGTGAAGT 58.920 45.000 0.00 0.00 39.49 3.01
151 152 2.166741 TTTGTGTCGTTTGCGTGAAG 57.833 45.000 0.00 0.00 39.49 3.02
152 153 2.353269 AGATTTGTGTCGTTTGCGTGAA 59.647 40.909 0.00 0.00 39.49 3.18
153 154 1.937223 AGATTTGTGTCGTTTGCGTGA 59.063 42.857 0.00 0.00 39.49 4.35
154 155 2.298300 GAGATTTGTGTCGTTTGCGTG 58.702 47.619 0.00 0.00 39.49 5.34
155 156 1.070843 CGAGATTTGTGTCGTTTGCGT 60.071 47.619 0.00 0.00 39.49 5.24
156 157 1.191425 TCGAGATTTGTGTCGTTTGCG 59.809 47.619 0.00 0.00 37.46 4.85
157 158 2.941891 TCGAGATTTGTGTCGTTTGC 57.058 45.000 0.00 0.00 37.46 3.68
158 159 4.666176 CAGTTTCGAGATTTGTGTCGTTTG 59.334 41.667 0.00 0.00 37.46 2.93
159 160 4.785341 GCAGTTTCGAGATTTGTGTCGTTT 60.785 41.667 0.00 0.00 37.46 3.60
160 161 3.303132 GCAGTTTCGAGATTTGTGTCGTT 60.303 43.478 0.00 0.00 37.46 3.85
161 162 2.221055 GCAGTTTCGAGATTTGTGTCGT 59.779 45.455 0.00 0.00 37.46 4.34
162 163 2.220824 TGCAGTTTCGAGATTTGTGTCG 59.779 45.455 0.00 0.00 37.54 4.35
163 164 3.878086 TGCAGTTTCGAGATTTGTGTC 57.122 42.857 0.00 0.00 0.00 3.67
164 165 4.836125 AATGCAGTTTCGAGATTTGTGT 57.164 36.364 0.00 0.00 0.00 3.72
165 166 5.736040 GAAATGCAGTTTCGAGATTTGTG 57.264 39.130 0.00 0.00 37.10 3.33
175 176 7.704789 AATTCAAACTCAGAAATGCAGTTTC 57.295 32.000 0.00 7.13 45.31 2.78
176 177 8.496707 AAAATTCAAACTCAGAAATGCAGTTT 57.503 26.923 0.00 0.00 40.28 2.66
177 178 8.496707 AAAAATTCAAACTCAGAAATGCAGTT 57.503 26.923 0.00 0.00 31.48 3.16
178 179 7.983484 AGAAAAATTCAAACTCAGAAATGCAGT 59.017 29.630 0.00 0.00 0.00 4.40
179 180 8.361592 AGAAAAATTCAAACTCAGAAATGCAG 57.638 30.769 0.00 0.00 0.00 4.41
180 181 8.721019 AAGAAAAATTCAAACTCAGAAATGCA 57.279 26.923 0.00 0.00 0.00 3.96
181 182 9.429600 CAAAGAAAAATTCAAACTCAGAAATGC 57.570 29.630 0.00 0.00 0.00 3.56
182 183 9.925268 CCAAAGAAAAATTCAAACTCAGAAATG 57.075 29.630 0.00 0.00 0.00 2.32
183 184 8.615211 GCCAAAGAAAAATTCAAACTCAGAAAT 58.385 29.630 0.00 0.00 0.00 2.17
184 185 7.823799 AGCCAAAGAAAAATTCAAACTCAGAAA 59.176 29.630 0.00 0.00 0.00 2.52
185 186 7.278424 CAGCCAAAGAAAAATTCAAACTCAGAA 59.722 33.333 0.00 0.00 0.00 3.02
186 187 6.757947 CAGCCAAAGAAAAATTCAAACTCAGA 59.242 34.615 0.00 0.00 0.00 3.27
187 188 6.018507 CCAGCCAAAGAAAAATTCAAACTCAG 60.019 38.462 0.00 0.00 0.00 3.35
188 189 5.816777 CCAGCCAAAGAAAAATTCAAACTCA 59.183 36.000 0.00 0.00 0.00 3.41
189 190 5.817296 ACCAGCCAAAGAAAAATTCAAACTC 59.183 36.000 0.00 0.00 0.00 3.01
190 191 5.585844 CACCAGCCAAAGAAAAATTCAAACT 59.414 36.000 0.00 0.00 0.00 2.66
191 192 5.584251 TCACCAGCCAAAGAAAAATTCAAAC 59.416 36.000 0.00 0.00 0.00 2.93
192 193 5.738909 TCACCAGCCAAAGAAAAATTCAAA 58.261 33.333 0.00 0.00 0.00 2.69
193 194 5.350504 TCACCAGCCAAAGAAAAATTCAA 57.649 34.783 0.00 0.00 0.00 2.69
194 195 5.350504 TTCACCAGCCAAAGAAAAATTCA 57.649 34.783 0.00 0.00 0.00 2.57
195 196 6.866010 ATTTCACCAGCCAAAGAAAAATTC 57.134 33.333 0.00 0.00 34.13 2.17
196 197 7.938490 ACATATTTCACCAGCCAAAGAAAAATT 59.062 29.630 0.00 0.00 34.13 1.82
197 198 7.452562 ACATATTTCACCAGCCAAAGAAAAAT 58.547 30.769 0.00 0.00 34.13 1.82
198 199 6.825610 ACATATTTCACCAGCCAAAGAAAAA 58.174 32.000 0.00 0.00 34.13 1.94
199 200 6.418057 ACATATTTCACCAGCCAAAGAAAA 57.582 33.333 0.00 0.00 34.13 2.29
200 201 7.531857 TTACATATTTCACCAGCCAAAGAAA 57.468 32.000 0.00 0.00 34.83 2.52
201 202 7.531857 TTTACATATTTCACCAGCCAAAGAA 57.468 32.000 0.00 0.00 0.00 2.52
202 203 7.716799 ATTTACATATTTCACCAGCCAAAGA 57.283 32.000 0.00 0.00 0.00 2.52
203 204 8.776376 AAATTTACATATTTCACCAGCCAAAG 57.224 30.769 0.00 0.00 0.00 2.77
204 205 8.370940 TGAAATTTACATATTTCACCAGCCAAA 58.629 29.630 7.48 0.00 45.02 3.28
205 206 7.901029 TGAAATTTACATATTTCACCAGCCAA 58.099 30.769 7.48 0.00 45.02 4.52
206 207 7.473735 TGAAATTTACATATTTCACCAGCCA 57.526 32.000 7.48 0.00 45.02 4.75
223 224 8.992073 GCCATAGTTGTTCTCATTTTGAAATTT 58.008 29.630 0.00 0.00 0.00 1.82
224 225 8.149647 TGCCATAGTTGTTCTCATTTTGAAATT 58.850 29.630 0.00 0.00 0.00 1.82
225 226 7.669427 TGCCATAGTTGTTCTCATTTTGAAAT 58.331 30.769 0.00 0.00 0.00 2.17
226 227 7.014134 TCTGCCATAGTTGTTCTCATTTTGAAA 59.986 33.333 0.00 0.00 0.00 2.69
227 228 6.489700 TCTGCCATAGTTGTTCTCATTTTGAA 59.510 34.615 0.00 0.00 0.00 2.69
228 229 6.003326 TCTGCCATAGTTGTTCTCATTTTGA 58.997 36.000 0.00 0.00 0.00 2.69
229 230 6.258230 TCTGCCATAGTTGTTCTCATTTTG 57.742 37.500 0.00 0.00 0.00 2.44
230 231 7.472334 AATCTGCCATAGTTGTTCTCATTTT 57.528 32.000 0.00 0.00 0.00 1.82
231 232 6.183360 CGAATCTGCCATAGTTGTTCTCATTT 60.183 38.462 0.00 0.00 0.00 2.32
232 233 5.295292 CGAATCTGCCATAGTTGTTCTCATT 59.705 40.000 0.00 0.00 0.00 2.57
233 234 4.813161 CGAATCTGCCATAGTTGTTCTCAT 59.187 41.667 0.00 0.00 0.00 2.90
234 235 4.183865 CGAATCTGCCATAGTTGTTCTCA 58.816 43.478 0.00 0.00 0.00 3.27
235 236 4.184629 ACGAATCTGCCATAGTTGTTCTC 58.815 43.478 0.00 0.00 0.00 2.87
236 237 4.081420 AGACGAATCTGCCATAGTTGTTCT 60.081 41.667 0.00 0.00 32.29 3.01
237 238 4.033358 CAGACGAATCTGCCATAGTTGTTC 59.967 45.833 0.00 0.00 45.83 3.18
238 239 3.935203 CAGACGAATCTGCCATAGTTGTT 59.065 43.478 0.00 0.00 45.83 2.83
239 240 3.525537 CAGACGAATCTGCCATAGTTGT 58.474 45.455 0.00 0.00 45.83 3.32
250 251 4.158764 AGAAACGGAGAATCAGACGAATCT 59.841 41.667 0.00 0.00 33.93 2.40
251 252 4.425520 AGAAACGGAGAATCAGACGAATC 58.574 43.478 0.00 0.00 36.25 2.52
252 253 4.457834 AGAAACGGAGAATCAGACGAAT 57.542 40.909 0.00 0.00 36.25 3.34
253 254 3.936372 AGAAACGGAGAATCAGACGAA 57.064 42.857 0.00 0.00 36.25 3.85
254 255 3.005472 ACAAGAAACGGAGAATCAGACGA 59.995 43.478 0.00 0.00 36.25 4.20
255 256 3.318017 ACAAGAAACGGAGAATCAGACG 58.682 45.455 0.00 0.00 36.25 4.18
256 257 4.611581 GCAACAAGAAACGGAGAATCAGAC 60.612 45.833 0.00 0.00 36.25 3.51
257 258 3.498397 GCAACAAGAAACGGAGAATCAGA 59.502 43.478 0.00 0.00 36.25 3.27
258 259 3.365364 GGCAACAAGAAACGGAGAATCAG 60.365 47.826 0.00 0.00 36.25 2.90
259 260 2.552315 GGCAACAAGAAACGGAGAATCA 59.448 45.455 0.00 0.00 36.25 2.57
260 261 3.203161 GGCAACAAGAAACGGAGAATC 57.797 47.619 0.00 0.00 0.00 2.52
275 276 2.029844 GGACTCGACTGCTGGCAAC 61.030 63.158 0.00 0.00 0.00 4.17
276 277 1.830587 ATGGACTCGACTGCTGGCAA 61.831 55.000 0.00 0.00 0.00 4.52
277 278 0.970427 TATGGACTCGACTGCTGGCA 60.970 55.000 0.00 0.00 0.00 4.92
278 279 0.390860 ATATGGACTCGACTGCTGGC 59.609 55.000 0.00 0.00 0.00 4.85
279 280 2.898729 AATATGGACTCGACTGCTGG 57.101 50.000 0.00 0.00 0.00 4.85
280 281 4.576216 AGTAATATGGACTCGACTGCTG 57.424 45.455 0.00 0.00 0.00 4.41
281 282 4.737946 GCAAGTAATATGGACTCGACTGCT 60.738 45.833 5.67 0.00 28.68 4.24
282 283 3.491267 GCAAGTAATATGGACTCGACTGC 59.509 47.826 0.00 0.00 0.00 4.40
283 284 4.682787 TGCAAGTAATATGGACTCGACTG 58.317 43.478 0.00 0.00 0.00 3.51
284 285 5.537300 ATGCAAGTAATATGGACTCGACT 57.463 39.130 0.00 0.00 0.00 4.18
285 286 5.523916 ACAATGCAAGTAATATGGACTCGAC 59.476 40.000 0.00 0.00 0.00 4.20
286 287 5.523552 CACAATGCAAGTAATATGGACTCGA 59.476 40.000 0.00 0.00 0.00 4.04
287 288 5.294306 ACACAATGCAAGTAATATGGACTCG 59.706 40.000 0.00 0.00 0.00 4.18
288 289 6.683974 ACACAATGCAAGTAATATGGACTC 57.316 37.500 0.00 0.00 0.00 3.36
289 290 7.466746 AAACACAATGCAAGTAATATGGACT 57.533 32.000 0.00 0.00 0.00 3.85
290 291 9.072294 GTAAAACACAATGCAAGTAATATGGAC 57.928 33.333 0.00 0.00 0.00 4.02
291 292 9.019656 AGTAAAACACAATGCAAGTAATATGGA 57.980 29.630 0.00 0.00 0.00 3.41
292 293 9.638239 AAGTAAAACACAATGCAAGTAATATGG 57.362 29.630 0.00 0.00 0.00 2.74
294 295 9.638239 CCAAGTAAAACACAATGCAAGTAATAT 57.362 29.630 0.00 0.00 0.00 1.28
295 296 8.085296 CCCAAGTAAAACACAATGCAAGTAATA 58.915 33.333 0.00 0.00 0.00 0.98
296 297 6.928492 CCCAAGTAAAACACAATGCAAGTAAT 59.072 34.615 0.00 0.00 0.00 1.89
297 298 6.276847 CCCAAGTAAAACACAATGCAAGTAA 58.723 36.000 0.00 0.00 0.00 2.24
298 299 5.221342 CCCCAAGTAAAACACAATGCAAGTA 60.221 40.000 0.00 0.00 0.00 2.24
299 300 4.442753 CCCCAAGTAAAACACAATGCAAGT 60.443 41.667 0.00 0.00 0.00 3.16
300 301 4.057432 CCCCAAGTAAAACACAATGCAAG 58.943 43.478 0.00 0.00 0.00 4.01
301 302 3.452627 ACCCCAAGTAAAACACAATGCAA 59.547 39.130 0.00 0.00 0.00 4.08
302 303 3.034635 ACCCCAAGTAAAACACAATGCA 58.965 40.909 0.00 0.00 0.00 3.96
303 304 3.744238 ACCCCAAGTAAAACACAATGC 57.256 42.857 0.00 0.00 0.00 3.56
304 305 4.295051 CGAACCCCAAGTAAAACACAATG 58.705 43.478 0.00 0.00 0.00 2.82
305 306 3.319689 CCGAACCCCAAGTAAAACACAAT 59.680 43.478 0.00 0.00 0.00 2.71
306 307 2.688958 CCGAACCCCAAGTAAAACACAA 59.311 45.455 0.00 0.00 0.00 3.33
307 308 2.299521 CCGAACCCCAAGTAAAACACA 58.700 47.619 0.00 0.00 0.00 3.72
308 309 1.610038 CCCGAACCCCAAGTAAAACAC 59.390 52.381 0.00 0.00 0.00 3.32
309 310 1.984066 CCCGAACCCCAAGTAAAACA 58.016 50.000 0.00 0.00 0.00 2.83
310 311 0.599558 GCCCGAACCCCAAGTAAAAC 59.400 55.000 0.00 0.00 0.00 2.43
311 312 0.479378 AGCCCGAACCCCAAGTAAAA 59.521 50.000 0.00 0.00 0.00 1.52
312 313 0.250989 CAGCCCGAACCCCAAGTAAA 60.251 55.000 0.00 0.00 0.00 2.01
313 314 1.377229 CAGCCCGAACCCCAAGTAA 59.623 57.895 0.00 0.00 0.00 2.24
314 315 1.833787 GACAGCCCGAACCCCAAGTA 61.834 60.000 0.00 0.00 0.00 2.24
315 316 3.175710 ACAGCCCGAACCCCAAGT 61.176 61.111 0.00 0.00 0.00 3.16
316 317 2.359975 GACAGCCCGAACCCCAAG 60.360 66.667 0.00 0.00 0.00 3.61
317 318 2.478335 GATGACAGCCCGAACCCCAA 62.478 60.000 0.00 0.00 0.00 4.12
318 319 2.933287 ATGACAGCCCGAACCCCA 60.933 61.111 0.00 0.00 0.00 4.96
319 320 2.124695 GATGACAGCCCGAACCCC 60.125 66.667 0.00 0.00 0.00 4.95
320 321 2.511600 CGATGACAGCCCGAACCC 60.512 66.667 0.00 0.00 0.00 4.11
321 322 2.100631 CACGATGACAGCCCGAACC 61.101 63.158 0.00 0.00 0.00 3.62
322 323 0.108992 TACACGATGACAGCCCGAAC 60.109 55.000 0.00 0.00 0.00 3.95
323 324 0.821517 ATACACGATGACAGCCCGAA 59.178 50.000 0.00 0.00 0.00 4.30
324 325 0.821517 AATACACGATGACAGCCCGA 59.178 50.000 0.00 0.00 0.00 5.14
325 326 0.930310 CAATACACGATGACAGCCCG 59.070 55.000 0.00 0.00 0.00 6.13
326 327 2.024176 ACAATACACGATGACAGCCC 57.976 50.000 0.00 0.00 0.00 5.19
327 328 3.000041 TGAACAATACACGATGACAGCC 59.000 45.455 0.00 0.00 0.00 4.85
328 329 3.991069 GTGAACAATACACGATGACAGC 58.009 45.455 0.00 0.00 0.00 4.40
345 346 2.536761 CCTTAGTGGTTCACCGTGAA 57.463 50.000 9.99 9.99 39.43 3.18
356 357 2.431057 ACCTCGCATAGAACCTTAGTGG 59.569 50.000 0.00 0.00 42.93 4.00
357 358 3.707793 GACCTCGCATAGAACCTTAGTG 58.292 50.000 0.00 0.00 0.00 2.74
358 359 2.358267 CGACCTCGCATAGAACCTTAGT 59.642 50.000 0.00 0.00 0.00 2.24
359 360 2.617308 TCGACCTCGCATAGAACCTTAG 59.383 50.000 0.00 0.00 39.60 2.18
360 361 2.357009 GTCGACCTCGCATAGAACCTTA 59.643 50.000 3.51 0.00 39.60 2.69
361 362 1.134560 GTCGACCTCGCATAGAACCTT 59.865 52.381 3.51 0.00 39.60 3.50
362 363 0.739561 GTCGACCTCGCATAGAACCT 59.260 55.000 3.51 0.00 39.60 3.50
363 364 0.739561 AGTCGACCTCGCATAGAACC 59.260 55.000 13.01 0.00 39.60 3.62
364 365 1.268640 GGAGTCGACCTCGCATAGAAC 60.269 57.143 13.01 0.00 41.46 3.01
365 366 1.022735 GGAGTCGACCTCGCATAGAA 58.977 55.000 13.01 0.00 41.46 2.10
366 367 0.107361 TGGAGTCGACCTCGCATAGA 60.107 55.000 13.01 0.00 41.46 1.98
367 368 0.029567 GTGGAGTCGACCTCGCATAG 59.970 60.000 13.01 0.00 41.46 2.23
368 369 1.712018 CGTGGAGTCGACCTCGCATA 61.712 60.000 13.01 0.00 41.46 3.14
369 370 2.885861 GTGGAGTCGACCTCGCAT 59.114 61.111 13.01 0.00 41.46 4.73
370 371 3.733960 CGTGGAGTCGACCTCGCA 61.734 66.667 13.01 6.94 41.46 5.10
371 372 2.467946 TTTCGTGGAGTCGACCTCGC 62.468 60.000 13.01 10.37 43.58 5.03
372 373 0.728466 GTTTCGTGGAGTCGACCTCG 60.728 60.000 13.01 10.93 44.71 4.63
373 374 0.313043 TGTTTCGTGGAGTCGACCTC 59.687 55.000 13.01 9.08 39.58 3.85
374 375 0.031721 GTGTTTCGTGGAGTCGACCT 59.968 55.000 13.01 0.00 39.58 3.85
375 376 0.249155 TGTGTTTCGTGGAGTCGACC 60.249 55.000 13.01 3.55 39.58 4.79
376 377 0.850856 GTGTGTTTCGTGGAGTCGAC 59.149 55.000 7.70 7.70 39.58 4.20
377 378 0.456628 TGTGTGTTTCGTGGAGTCGA 59.543 50.000 0.00 0.00 38.08 4.20
378 379 0.852777 CTGTGTGTTTCGTGGAGTCG 59.147 55.000 0.00 0.00 0.00 4.18
379 380 0.582005 GCTGTGTGTTTCGTGGAGTC 59.418 55.000 0.00 0.00 0.00 3.36
380 381 0.107897 TGCTGTGTGTTTCGTGGAGT 60.108 50.000 0.00 0.00 0.00 3.85
381 382 1.195448 GATGCTGTGTGTTTCGTGGAG 59.805 52.381 0.00 0.00 0.00 3.86
382 383 1.225855 GATGCTGTGTGTTTCGTGGA 58.774 50.000 0.00 0.00 0.00 4.02
383 384 0.238289 GGATGCTGTGTGTTTCGTGG 59.762 55.000 0.00 0.00 0.00 4.94
384 385 0.943673 TGGATGCTGTGTGTTTCGTG 59.056 50.000 0.00 0.00 0.00 4.35
385 386 0.944386 GTGGATGCTGTGTGTTTCGT 59.056 50.000 0.00 0.00 0.00 3.85
386 387 0.238289 GGTGGATGCTGTGTGTTTCG 59.762 55.000 0.00 0.00 0.00 3.46
387 388 0.238289 CGGTGGATGCTGTGTGTTTC 59.762 55.000 0.00 0.00 0.00 2.78
388 389 1.795170 GCGGTGGATGCTGTGTGTTT 61.795 55.000 0.00 0.00 0.00 2.83
389 390 2.260869 GCGGTGGATGCTGTGTGTT 61.261 57.895 0.00 0.00 0.00 3.32
390 391 2.669569 GCGGTGGATGCTGTGTGT 60.670 61.111 0.00 0.00 0.00 3.72
391 392 3.434319 GGCGGTGGATGCTGTGTG 61.434 66.667 0.00 0.00 0.00 3.82
392 393 3.612247 GAGGCGGTGGATGCTGTGT 62.612 63.158 0.00 0.00 0.00 3.72
393 394 2.821366 GAGGCGGTGGATGCTGTG 60.821 66.667 0.00 0.00 0.00 3.66
394 395 4.101448 GGAGGCGGTGGATGCTGT 62.101 66.667 0.00 0.00 0.00 4.40
395 396 3.746949 GAGGAGGCGGTGGATGCTG 62.747 68.421 0.00 0.00 0.00 4.41
396 397 3.474570 GAGGAGGCGGTGGATGCT 61.475 66.667 0.00 0.00 0.00 3.79
397 398 3.453070 GAGAGGAGGCGGTGGATGC 62.453 68.421 0.00 0.00 0.00 3.91
398 399 2.801631 GGAGAGGAGGCGGTGGATG 61.802 68.421 0.00 0.00 0.00 3.51
399 400 2.444895 GGAGAGGAGGCGGTGGAT 60.445 66.667 0.00 0.00 0.00 3.41
400 401 4.779733 GGGAGAGGAGGCGGTGGA 62.780 72.222 0.00 0.00 0.00 4.02
402 403 3.003173 TTGGGAGAGGAGGCGGTG 61.003 66.667 0.00 0.00 0.00 4.94
403 404 2.685380 CTTGGGAGAGGAGGCGGT 60.685 66.667 0.00 0.00 0.00 5.68
404 405 1.553690 TTTCTTGGGAGAGGAGGCGG 61.554 60.000 0.00 0.00 32.44 6.13
405 406 0.324943 TTTTCTTGGGAGAGGAGGCG 59.675 55.000 0.00 0.00 32.44 5.52
406 407 2.586648 TTTTTCTTGGGAGAGGAGGC 57.413 50.000 0.00 0.00 32.44 4.70
422 423 0.327259 GCGGAGACCCTACCCTTTTT 59.673 55.000 0.00 0.00 0.00 1.94
423 424 1.559965 GGCGGAGACCCTACCCTTTT 61.560 60.000 0.00 0.00 0.00 2.27
424 425 1.993948 GGCGGAGACCCTACCCTTT 60.994 63.158 0.00 0.00 0.00 3.11
425 426 1.587522 TAGGCGGAGACCCTACCCTT 61.588 60.000 0.00 0.00 31.70 3.95
426 427 1.587522 TTAGGCGGAGACCCTACCCT 61.588 60.000 0.00 0.00 31.70 4.34
427 428 1.075748 TTAGGCGGAGACCCTACCC 60.076 63.158 0.00 0.00 31.70 3.69
428 429 1.114119 CCTTAGGCGGAGACCCTACC 61.114 65.000 0.00 0.00 31.70 3.18
429 430 1.114119 CCCTTAGGCGGAGACCCTAC 61.114 65.000 0.00 0.00 31.70 3.18
430 431 1.232216 CCCTTAGGCGGAGACCCTA 59.768 63.158 0.00 0.00 31.70 3.53
431 432 1.962570 ATCCCTTAGGCGGAGACCCT 61.963 60.000 0.00 0.00 31.70 4.34
432 433 1.459730 ATCCCTTAGGCGGAGACCC 60.460 63.158 0.00 0.00 31.70 4.46
433 434 0.470268 AGATCCCTTAGGCGGAGACC 60.470 60.000 0.00 0.00 31.70 3.85
434 435 0.676736 CAGATCCCTTAGGCGGAGAC 59.323 60.000 0.00 0.00 31.41 3.36
435 436 1.115930 GCAGATCCCTTAGGCGGAGA 61.116 60.000 0.00 0.00 31.41 3.71
436 437 1.369321 GCAGATCCCTTAGGCGGAG 59.631 63.158 0.00 0.00 31.41 4.63
437 438 2.140792 GGCAGATCCCTTAGGCGGA 61.141 63.158 0.00 0.00 0.00 5.54
438 439 2.427753 GGCAGATCCCTTAGGCGG 59.572 66.667 0.00 0.00 0.00 6.13
439 440 2.029666 CGGCAGATCCCTTAGGCG 59.970 66.667 0.00 0.00 43.34 5.52
440 441 1.069935 GACGGCAGATCCCTTAGGC 59.930 63.158 0.00 0.00 0.00 3.93
441 442 0.105039 GTGACGGCAGATCCCTTAGG 59.895 60.000 0.00 0.00 0.00 2.69
442 443 0.105039 GGTGACGGCAGATCCCTTAG 59.895 60.000 0.00 0.00 0.00 2.18
443 444 2.208527 GGTGACGGCAGATCCCTTA 58.791 57.895 0.00 0.00 0.00 2.69
444 445 2.990479 GGTGACGGCAGATCCCTT 59.010 61.111 0.00 0.00 0.00 3.95
474 475 0.879090 GTACCAAAAGGCACCCGAAG 59.121 55.000 0.00 0.00 0.00 3.79
475 476 0.537828 GGTACCAAAAGGCACCCGAA 60.538 55.000 7.15 0.00 0.00 4.30
476 477 1.073548 GGTACCAAAAGGCACCCGA 59.926 57.895 7.15 0.00 0.00 5.14
477 478 3.676216 GGTACCAAAAGGCACCCG 58.324 61.111 7.15 0.00 0.00 5.28
494 495 1.768077 GGTCTCCCTCCCCTCATGG 60.768 68.421 0.00 0.00 0.00 3.66
495 496 1.768077 GGGTCTCCCTCCCCTCATG 60.768 68.421 0.00 0.00 41.34 3.07
496 497 2.706071 GGGTCTCCCTCCCCTCAT 59.294 66.667 0.00 0.00 41.34 2.90
497 498 4.075793 CGGGTCTCCCTCCCCTCA 62.076 72.222 3.25 0.00 42.67 3.86
498 499 4.862823 CCGGGTCTCCCTCCCCTC 62.863 77.778 0.00 0.00 42.67 4.30
502 503 4.393778 TGACCCGGGTCTCCCTCC 62.394 72.222 44.64 24.69 42.67 4.30
503 504 2.760385 CTGACCCGGGTCTCCCTC 60.760 72.222 44.64 25.40 42.67 4.30
504 505 4.400251 CCTGACCCGGGTCTCCCT 62.400 72.222 44.64 17.40 42.67 4.20
512 513 0.178068 CATAGACAACCCTGACCCGG 59.822 60.000 0.00 0.00 0.00 5.73
513 514 0.902531 ACATAGACAACCCTGACCCG 59.097 55.000 0.00 0.00 0.00 5.28
514 515 3.105283 ACTACATAGACAACCCTGACCC 58.895 50.000 0.00 0.00 0.00 4.46
515 516 4.024670 AGACTACATAGACAACCCTGACC 58.975 47.826 0.00 0.00 0.00 4.02
516 517 5.662674 AAGACTACATAGACAACCCTGAC 57.337 43.478 0.00 0.00 0.00 3.51
517 518 5.892119 CCTAAGACTACATAGACAACCCTGA 59.108 44.000 0.00 0.00 0.00 3.86
518 519 5.657302 ACCTAAGACTACATAGACAACCCTG 59.343 44.000 0.00 0.00 0.00 4.45
519 520 5.840081 ACCTAAGACTACATAGACAACCCT 58.160 41.667 0.00 0.00 0.00 4.34
520 521 5.655532 TGACCTAAGACTACATAGACAACCC 59.344 44.000 0.00 0.00 0.00 4.11
521 522 6.377712 AGTGACCTAAGACTACATAGACAACC 59.622 42.308 0.00 0.00 0.00 3.77
522 523 7.337436 AGAGTGACCTAAGACTACATAGACAAC 59.663 40.741 0.00 0.00 0.00 3.32
523 524 7.403671 AGAGTGACCTAAGACTACATAGACAA 58.596 38.462 0.00 0.00 0.00 3.18
524 525 6.959904 AGAGTGACCTAAGACTACATAGACA 58.040 40.000 0.00 0.00 0.00 3.41
525 526 8.206189 ACTAGAGTGACCTAAGACTACATAGAC 58.794 40.741 0.00 0.00 0.00 2.59
526 527 8.321621 ACTAGAGTGACCTAAGACTACATAGA 57.678 38.462 0.00 0.00 0.00 1.98
527 528 8.967664 AACTAGAGTGACCTAAGACTACATAG 57.032 38.462 0.00 0.00 0.00 2.23
528 529 9.750783 AAAACTAGAGTGACCTAAGACTACATA 57.249 33.333 0.00 0.00 0.00 2.29
529 530 8.653036 AAAACTAGAGTGACCTAAGACTACAT 57.347 34.615 0.00 0.00 0.00 2.29
530 531 7.722728 TGAAAACTAGAGTGACCTAAGACTACA 59.277 37.037 0.00 0.00 0.00 2.74
531 532 8.108551 TGAAAACTAGAGTGACCTAAGACTAC 57.891 38.462 0.00 0.00 0.00 2.73
532 533 8.880991 ATGAAAACTAGAGTGACCTAAGACTA 57.119 34.615 0.00 0.00 0.00 2.59
533 534 7.784470 ATGAAAACTAGAGTGACCTAAGACT 57.216 36.000 0.00 0.00 0.00 3.24
534 535 9.356433 GTAATGAAAACTAGAGTGACCTAAGAC 57.644 37.037 0.00 0.00 0.00 3.01
535 536 8.242053 CGTAATGAAAACTAGAGTGACCTAAGA 58.758 37.037 0.00 0.00 0.00 2.10
536 537 7.488471 CCGTAATGAAAACTAGAGTGACCTAAG 59.512 40.741 0.00 0.00 0.00 2.18
537 538 7.039504 ACCGTAATGAAAACTAGAGTGACCTAA 60.040 37.037 0.00 0.00 0.00 2.69
538 539 6.435277 ACCGTAATGAAAACTAGAGTGACCTA 59.565 38.462 0.00 0.00 0.00 3.08
539 540 5.245526 ACCGTAATGAAAACTAGAGTGACCT 59.754 40.000 0.00 0.00 0.00 3.85
540 541 5.476614 ACCGTAATGAAAACTAGAGTGACC 58.523 41.667 0.00 0.00 0.00 4.02
541 542 8.524870 TTAACCGTAATGAAAACTAGAGTGAC 57.475 34.615 0.00 0.00 0.00 3.67
542 543 8.362639 ACTTAACCGTAATGAAAACTAGAGTGA 58.637 33.333 0.00 0.00 0.00 3.41
543 544 8.530269 ACTTAACCGTAATGAAAACTAGAGTG 57.470 34.615 0.00 0.00 0.00 3.51
544 545 8.583296 AGACTTAACCGTAATGAAAACTAGAGT 58.417 33.333 0.00 0.00 0.00 3.24
545 546 8.983307 AGACTTAACCGTAATGAAAACTAGAG 57.017 34.615 0.00 0.00 0.00 2.43
547 548 9.298774 CCTAGACTTAACCGTAATGAAAACTAG 57.701 37.037 0.00 0.00 0.00 2.57
548 549 8.253113 CCCTAGACTTAACCGTAATGAAAACTA 58.747 37.037 0.00 0.00 0.00 2.24
549 550 7.101700 CCCTAGACTTAACCGTAATGAAAACT 58.898 38.462 0.00 0.00 0.00 2.66
550 551 6.875726 ACCCTAGACTTAACCGTAATGAAAAC 59.124 38.462 0.00 0.00 0.00 2.43
551 552 7.008021 ACCCTAGACTTAACCGTAATGAAAA 57.992 36.000 0.00 0.00 0.00 2.29
552 553 6.610075 ACCCTAGACTTAACCGTAATGAAA 57.390 37.500 0.00 0.00 0.00 2.69
553 554 6.211184 TCAACCCTAGACTTAACCGTAATGAA 59.789 38.462 0.00 0.00 0.00 2.57
554 555 5.716228 TCAACCCTAGACTTAACCGTAATGA 59.284 40.000 0.00 0.00 0.00 2.57
555 556 5.969423 TCAACCCTAGACTTAACCGTAATG 58.031 41.667 0.00 0.00 0.00 1.90
556 557 6.803366 ATCAACCCTAGACTTAACCGTAAT 57.197 37.500 0.00 0.00 0.00 1.89
557 558 6.610075 AATCAACCCTAGACTTAACCGTAA 57.390 37.500 0.00 0.00 0.00 3.18
558 559 7.902920 ATAATCAACCCTAGACTTAACCGTA 57.097 36.000 0.00 0.00 0.00 4.02
559 560 6.803366 ATAATCAACCCTAGACTTAACCGT 57.197 37.500 0.00 0.00 0.00 4.83
560 561 7.498443 AGAATAATCAACCCTAGACTTAACCG 58.502 38.462 0.00 0.00 0.00 4.44
561 562 9.682465 AAAGAATAATCAACCCTAGACTTAACC 57.318 33.333 0.00 0.00 0.00 2.85
564 565 9.174166 GCAAAAGAATAATCAACCCTAGACTTA 57.826 33.333 0.00 0.00 0.00 2.24
565 566 7.122799 GGCAAAAGAATAATCAACCCTAGACTT 59.877 37.037 0.00 0.00 0.00 3.01
566 567 6.603599 GGCAAAAGAATAATCAACCCTAGACT 59.396 38.462 0.00 0.00 0.00 3.24
567 568 6.183360 GGGCAAAAGAATAATCAACCCTAGAC 60.183 42.308 0.00 0.00 31.84 2.59
577 578 4.706962 ACCACTGAGGGCAAAAGAATAATC 59.293 41.667 0.00 0.00 43.89 1.75
583 584 0.550914 ACACCACTGAGGGCAAAAGA 59.449 50.000 0.00 0.00 43.89 2.52
604 605 4.530553 TCTGAGGGCAAAACTGAGTACATA 59.469 41.667 0.00 0.00 0.00 2.29
651 652 4.111016 CGGTGCGCACGGACTAGA 62.111 66.667 36.33 0.00 36.67 2.43
672 673 1.300620 CGGCAGAGTTCACGGAACA 60.301 57.895 15.94 0.00 44.11 3.18
737 738 3.989698 ATTGGTCGTCTCTGCCGCG 62.990 63.158 0.00 0.00 0.00 6.46
767 768 4.249020 CAAGCCACGCGTGCAACA 62.249 61.111 33.17 0.00 35.74 3.33
865 866 4.406173 CGCCGTGCTCTCTGTCGT 62.406 66.667 0.00 0.00 0.00 4.34
909 916 0.034896 CACAACTAGCTTCCCACCGT 59.965 55.000 0.00 0.00 0.00 4.83
1149 1156 2.981859 TTCTTACCCCATTCTCGCTC 57.018 50.000 0.00 0.00 0.00 5.03
1240 1247 4.154942 ACCCAAAGAAAGAAGCATGTCAT 58.845 39.130 0.00 0.00 0.00 3.06
1529 1536 5.841957 AGTTCATGCCTTTCCATACATTC 57.158 39.130 0.00 0.00 0.00 2.67
1553 1560 8.314021 ACAATTTCAAGATTACAAATTCCTCCC 58.686 33.333 0.00 0.00 29.17 4.30
1719 1734 2.346766 TTGACAGAAAGGCAGAGCAA 57.653 45.000 0.00 0.00 35.94 3.91
2043 2063 6.426646 TTTATTTTGGCACCAGGTGTAAAT 57.573 33.333 21.26 21.91 35.75 1.40
2235 2384 1.923148 CCTTCCTTCCCTACCCATGTT 59.077 52.381 0.00 0.00 0.00 2.71
2338 2566 5.764686 GCCCTCCAAAATTTCAGTGAAAAAT 59.235 36.000 21.57 11.29 35.11 1.82
2384 2613 2.548280 CCAAAATCATGTGGCAGTGCAA 60.548 45.455 18.61 1.42 0.00 4.08
2429 2659 3.573967 CCAAAACCAAGTGCCACTCTAAT 59.426 43.478 0.00 0.00 0.00 1.73
2449 2679 9.393512 CATGCAAATTTATTCCCTTTAAATCCA 57.606 29.630 0.00 0.00 30.79 3.41
2501 2734 1.599576 GGGTGAGAAGCCCTCTGTC 59.400 63.158 5.47 0.00 42.81 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.