Multiple sequence alignment - TraesCS2A01G095600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G095600 chr2A 100.000 7199 0 0 1 7199 49170615 49177813 0.000000e+00 13295.0
1 TraesCS2A01G095600 chr2A 91.709 591 45 3 218 806 194134382 194134970 0.000000e+00 817.0
2 TraesCS2A01G095600 chr2A 98.990 99 0 1 6596 6693 455485818 455485720 7.420000e-40 176.0
3 TraesCS2A01G095600 chr2A 98.276 58 1 0 836 893 49171393 49171450 1.280000e-17 102.0
4 TraesCS2A01G095600 chr2A 98.276 58 1 0 779 836 49171450 49171507 1.280000e-17 102.0
5 TraesCS2A01G095600 chr2D 96.290 5472 158 22 931 6379 45675546 45680995 0.000000e+00 8938.0
6 TraesCS2A01G095600 chr2D 95.019 522 22 4 6681 7199 45681119 45681639 0.000000e+00 817.0
7 TraesCS2A01G095600 chr2D 97.826 46 1 0 868 913 45675516 45675561 5.990000e-11 80.5
8 TraesCS2A01G095600 chr2D 87.302 63 8 0 421 483 631282657 631282719 1.000000e-08 73.1
9 TraesCS2A01G095600 chr2D 84.848 66 10 0 421 486 187043300 187043235 4.660000e-07 67.6
10 TraesCS2A01G095600 chr2B 94.652 5479 227 31 931 6379 72811076 72816518 0.000000e+00 8434.0
11 TraesCS2A01G095600 chr2B 92.586 526 25 5 6686 7199 72816541 72817064 0.000000e+00 743.0
12 TraesCS2A01G095600 chr2B 100.000 94 0 0 6596 6689 560726040 560726133 2.670000e-39 174.0
13 TraesCS2A01G095600 chr1B 91.341 589 47 3 218 804 597400364 597399778 0.000000e+00 802.0
14 TraesCS2A01G095600 chr1B 89.782 597 58 3 218 813 314560883 314560289 0.000000e+00 761.0
15 TraesCS2A01G095600 chr1B 95.536 224 4 3 6378 6595 192270280 192270057 3.190000e-93 353.0
16 TraesCS2A01G095600 chr6A 90.582 584 53 2 218 800 539370782 539371364 0.000000e+00 773.0
17 TraesCS2A01G095600 chr6A 88.636 352 26 5 218 561 581836882 581836537 4.020000e-112 416.0
18 TraesCS2A01G095600 chr6A 95.536 224 4 3 6378 6595 574651142 574650919 3.190000e-93 353.0
19 TraesCS2A01G095600 chr6A 88.889 234 25 1 558 791 581835363 581835131 3.290000e-73 287.0
20 TraesCS2A01G095600 chr6A 83.562 73 9 2 388 457 310195013 310194941 1.680000e-06 65.8
21 TraesCS2A01G095600 chr3A 90.893 571 43 5 218 786 648731513 648732076 0.000000e+00 758.0
22 TraesCS2A01G095600 chr3A 95.495 111 2 3 6596 6705 734454696 734454588 2.670000e-39 174.0
23 TraesCS2A01G095600 chr6B 90.653 567 51 2 218 783 189216248 189216813 0.000000e+00 752.0
24 TraesCS2A01G095600 chr6B 88.296 581 52 6 219 795 439357822 439357254 0.000000e+00 682.0
25 TraesCS2A01G095600 chr6B 87.797 590 62 5 219 803 585911180 585910596 0.000000e+00 682.0
26 TraesCS2A01G095600 chr6B 87.312 599 47 13 206 800 617224 617797 0.000000e+00 658.0
27 TraesCS2A01G095600 chr6B 95.536 224 4 3 6378 6595 522330603 522330380 3.190000e-93 353.0
28 TraesCS2A01G095600 chr6B 95.536 224 4 3 6378 6595 713262414 713262637 3.190000e-93 353.0
29 TraesCS2A01G095600 chr6B 99.000 100 0 1 6596 6695 578295156 578295058 2.060000e-40 178.0
30 TraesCS2A01G095600 chr5A 91.697 542 41 3 218 755 382562649 382563190 0.000000e+00 749.0
31 TraesCS2A01G095600 chr5A 97.115 104 1 2 6596 6698 587413211 587413109 2.670000e-39 174.0
32 TraesCS2A01G095600 chr4A 90.053 563 52 2 216 778 645500649 645501207 0.000000e+00 726.0
33 TraesCS2A01G095600 chr4A 95.536 224 4 3 6378 6595 624981619 624981396 3.190000e-93 353.0
34 TraesCS2A01G095600 chr7D 87.273 550 67 3 217 764 167835038 167835586 6.130000e-175 625.0
35 TraesCS2A01G095600 chr7D 85.477 241 33 2 220 459 155299829 155300068 4.310000e-62 250.0
36 TraesCS2A01G095600 chr7D 88.060 67 8 0 421 487 577978342 577978408 5.990000e-11 80.5
37 TraesCS2A01G095600 chr6D 86.933 375 41 4 219 588 409779903 409780274 1.440000e-111 414.0
38 TraesCS2A01G095600 chr6D 94.595 111 3 3 6596 6704 401143257 401143148 1.240000e-37 169.0
39 TraesCS2A01G095600 chrUn 95.536 224 4 3 6378 6595 419797199 419796976 3.190000e-93 353.0
40 TraesCS2A01G095600 chrUn 95.536 224 4 3 6378 6595 435604238 435604015 3.190000e-93 353.0
41 TraesCS2A01G095600 chr5B 95.536 224 4 4 6378 6595 287776060 287776283 3.190000e-93 353.0
42 TraesCS2A01G095600 chr5B 76.427 403 71 13 218 602 623104025 623103629 5.700000e-46 196.0
43 TraesCS2A01G095600 chr5B 100.000 94 0 0 6596 6689 316714550 316714643 2.670000e-39 174.0
44 TraesCS2A01G095600 chr3D 95.536 224 4 3 6378 6595 417208235 417208012 3.190000e-93 353.0
45 TraesCS2A01G095600 chr3D 84.507 71 10 1 421 490 42305307 42305237 1.300000e-07 69.4
46 TraesCS2A01G095600 chr5D 84.155 284 29 11 4211 4488 497236681 497236408 1.990000e-65 261.0
47 TraesCS2A01G095600 chr5D 84.127 63 10 0 424 486 441254730 441254668 2.170000e-05 62.1
48 TraesCS2A01G095600 chr7B 96.296 108 1 3 6596 6701 46024578 46024472 2.670000e-39 174.0
49 TraesCS2A01G095600 chr1A 97.087 103 3 0 6596 6698 108688988 108688886 2.670000e-39 174.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G095600 chr2A 49170615 49177813 7198 False 13295.0 13295 100.000000 1 7199 1 chr2A.!!$F1 7198
1 TraesCS2A01G095600 chr2A 194134382 194134970 588 False 817.0 817 91.709000 218 806 1 chr2A.!!$F2 588
2 TraesCS2A01G095600 chr2D 45675516 45681639 6123 False 3278.5 8938 96.378333 868 7199 3 chr2D.!!$F2 6331
3 TraesCS2A01G095600 chr2B 72811076 72817064 5988 False 4588.5 8434 93.619000 931 7199 2 chr2B.!!$F2 6268
4 TraesCS2A01G095600 chr1B 597399778 597400364 586 True 802.0 802 91.341000 218 804 1 chr1B.!!$R3 586
5 TraesCS2A01G095600 chr1B 314560289 314560883 594 True 761.0 761 89.782000 218 813 1 chr1B.!!$R2 595
6 TraesCS2A01G095600 chr6A 539370782 539371364 582 False 773.0 773 90.582000 218 800 1 chr6A.!!$F1 582
7 TraesCS2A01G095600 chr6A 581835131 581836882 1751 True 351.5 416 88.762500 218 791 2 chr6A.!!$R3 573
8 TraesCS2A01G095600 chr3A 648731513 648732076 563 False 758.0 758 90.893000 218 786 1 chr3A.!!$F1 568
9 TraesCS2A01G095600 chr6B 189216248 189216813 565 False 752.0 752 90.653000 218 783 1 chr6B.!!$F2 565
10 TraesCS2A01G095600 chr6B 439357254 439357822 568 True 682.0 682 88.296000 219 795 1 chr6B.!!$R1 576
11 TraesCS2A01G095600 chr6B 585910596 585911180 584 True 682.0 682 87.797000 219 803 1 chr6B.!!$R4 584
12 TraesCS2A01G095600 chr6B 617224 617797 573 False 658.0 658 87.312000 206 800 1 chr6B.!!$F1 594
13 TraesCS2A01G095600 chr5A 382562649 382563190 541 False 749.0 749 91.697000 218 755 1 chr5A.!!$F1 537
14 TraesCS2A01G095600 chr4A 645500649 645501207 558 False 726.0 726 90.053000 216 778 1 chr4A.!!$F1 562
15 TraesCS2A01G095600 chr7D 167835038 167835586 548 False 625.0 625 87.273000 217 764 1 chr7D.!!$F2 547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
161 162 0.108019 AAAAGACGGAGGGAAACGCT 59.892 50.000 0.00 0.0 0.00 5.07 F
861 2073 0.179111 CGGCGCAGATTACTCTCCAA 60.179 55.000 10.83 0.0 0.00 3.53 F
1048 2260 0.394216 ATGCTTCGCCTGTGCCAATA 60.394 50.000 0.00 0.0 0.00 1.90 F
1787 3018 0.669077 AACGTAGAGCTATGCCTCCG 59.331 55.000 0.00 0.0 32.17 4.63 F
1844 3075 1.071605 GCATACGGATCGATTCCAGC 58.928 55.000 0.00 0.0 45.78 4.85 F
2119 3352 1.340017 ACAGCCGGATTATGTTGTGCT 60.340 47.619 5.05 0.0 0.00 4.40 F
3648 4885 2.041620 ACCTGCTGAGCCTTTAAATGGA 59.958 45.455 0.23 0.0 0.00 3.41 F
4186 5429 1.832167 GCCACACCAAAAGGAGGCA 60.832 57.895 0.00 0.0 41.63 4.75 F
4258 5501 2.941064 CTGCTCACCACTATTGTGATGG 59.059 50.000 8.98 0.0 46.55 3.51 F
5700 6946 1.096416 GTGGACTCCCTCTAGACACG 58.904 60.000 0.00 0.0 0.00 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1787 3018 0.384353 GTTTTGCGAGCTCGGACAAC 60.384 55.000 33.38 33.38 41.50 3.32 R
2569 3802 2.978156 AGGAACCAATGGCTTCTTCA 57.022 45.000 0.00 0.00 0.00 3.02 R
2630 3863 3.063510 TCTTTTGTGGCTCTCATCTGG 57.936 47.619 0.00 0.00 0.00 3.86 R
3207 4444 3.529634 TGTAAGCGACAAATTTGGACG 57.470 42.857 24.83 24.83 34.15 4.79 R
3648 4885 4.043435 AGTTTAAGGGCATGAGGTTTCTCT 59.957 41.667 0.00 0.00 40.58 3.10 R
3849 5092 1.289160 TGGGCAGCTGGAGAAAGTAT 58.711 50.000 17.12 0.00 0.00 2.12 R
4940 6184 0.460987 CACCTGTCATTCGCCTCCTC 60.461 60.000 0.00 0.00 0.00 3.71 R
5700 6946 0.376852 TGAAAGCGTGTTGTGCAGTC 59.623 50.000 0.00 0.00 33.85 3.51 R
5883 7129 2.083774 GCTACCTGCATTGCTGTTGTA 58.916 47.619 10.49 7.21 42.31 2.41 R
6632 7879 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.358737 AGGGCAACGAAGCGGAAG 60.359 61.111 0.00 0.00 34.64 3.46
18 19 2.358247 GGGCAACGAAGCGGAAGA 60.358 61.111 0.00 0.00 34.64 2.87
19 20 2.391389 GGGCAACGAAGCGGAAGAG 61.391 63.158 0.00 0.00 34.64 2.85
20 21 1.374252 GGCAACGAAGCGGAAGAGA 60.374 57.895 0.00 0.00 34.64 3.10
21 22 0.949105 GGCAACGAAGCGGAAGAGAA 60.949 55.000 0.00 0.00 34.64 2.87
22 23 1.079503 GCAACGAAGCGGAAGAGAAT 58.920 50.000 0.00 0.00 0.00 2.40
23 24 1.201965 GCAACGAAGCGGAAGAGAATG 60.202 52.381 0.00 0.00 0.00 2.67
24 25 1.394917 CAACGAAGCGGAAGAGAATGG 59.605 52.381 0.00 0.00 0.00 3.16
25 26 0.108138 ACGAAGCGGAAGAGAATGGG 60.108 55.000 0.00 0.00 0.00 4.00
26 27 0.811616 CGAAGCGGAAGAGAATGGGG 60.812 60.000 0.00 0.00 0.00 4.96
27 28 1.077429 AAGCGGAAGAGAATGGGGC 60.077 57.895 0.00 0.00 0.00 5.80
28 29 2.876368 AAGCGGAAGAGAATGGGGCG 62.876 60.000 0.00 0.00 0.00 6.13
29 30 2.203070 CGGAAGAGAATGGGGCGG 60.203 66.667 0.00 0.00 0.00 6.13
30 31 2.193248 GGAAGAGAATGGGGCGGG 59.807 66.667 0.00 0.00 0.00 6.13
31 32 2.375345 GGAAGAGAATGGGGCGGGA 61.375 63.158 0.00 0.00 0.00 5.14
32 33 1.147153 GAAGAGAATGGGGCGGGAG 59.853 63.158 0.00 0.00 0.00 4.30
47 48 4.074526 GAGCAGCGGCAGGACTGA 62.075 66.667 12.44 0.00 44.61 3.41
48 49 4.079850 AGCAGCGGCAGGACTGAG 62.080 66.667 12.44 0.00 44.61 3.35
49 50 4.074526 GCAGCGGCAGGACTGAGA 62.075 66.667 3.18 0.00 40.72 3.27
50 51 2.183811 CAGCGGCAGGACTGAGAG 59.816 66.667 1.45 0.00 35.90 3.20
51 52 2.036414 AGCGGCAGGACTGAGAGA 59.964 61.111 1.45 0.00 0.00 3.10
52 53 2.183046 GCGGCAGGACTGAGAGAC 59.817 66.667 3.00 0.00 0.00 3.36
53 54 2.888863 CGGCAGGACTGAGAGACC 59.111 66.667 3.00 0.00 0.00 3.85
54 55 1.979155 CGGCAGGACTGAGAGACCA 60.979 63.158 3.00 0.00 32.35 4.02
55 56 1.896694 GGCAGGACTGAGAGACCAG 59.103 63.158 3.00 0.00 39.93 4.00
56 57 1.612395 GGCAGGACTGAGAGACCAGG 61.612 65.000 3.00 0.00 38.44 4.45
57 58 1.896694 CAGGACTGAGAGACCAGGC 59.103 63.158 0.00 0.00 41.44 4.85
58 59 1.680651 AGGACTGAGAGACCAGGCG 60.681 63.158 0.00 0.00 43.09 5.52
59 60 2.716017 GGACTGAGAGACCAGGCGG 61.716 68.421 0.00 0.00 43.09 6.13
60 61 2.681778 ACTGAGAGACCAGGCGGG 60.682 66.667 0.79 0.79 44.81 6.13
61 62 4.154347 CTGAGAGACCAGGCGGGC 62.154 72.222 2.69 0.00 43.02 6.13
85 86 3.812019 CGACGGACGGGACCAGAG 61.812 72.222 0.00 0.00 38.46 3.35
86 87 4.131088 GACGGACGGGACCAGAGC 62.131 72.222 0.00 0.00 0.00 4.09
89 90 3.462678 GGACGGGACCAGAGCCTC 61.463 72.222 0.00 0.00 0.00 4.70
90 91 3.827898 GACGGGACCAGAGCCTCG 61.828 72.222 0.00 0.00 0.00 4.63
91 92 4.361971 ACGGGACCAGAGCCTCGA 62.362 66.667 0.00 0.00 0.00 4.04
92 93 3.827898 CGGGACCAGAGCCTCGAC 61.828 72.222 0.00 0.00 0.00 4.20
93 94 3.462678 GGGACCAGAGCCTCGACC 61.463 72.222 0.00 0.00 0.00 4.79
94 95 3.827898 GGACCAGAGCCTCGACCG 61.828 72.222 0.00 0.00 0.00 4.79
95 96 3.827898 GACCAGAGCCTCGACCGG 61.828 72.222 0.00 0.00 0.00 5.28
96 97 4.361971 ACCAGAGCCTCGACCGGA 62.362 66.667 9.46 0.00 0.00 5.14
97 98 3.522731 CCAGAGCCTCGACCGGAG 61.523 72.222 9.46 0.85 42.75 4.63
98 99 2.438614 CAGAGCCTCGACCGGAGA 60.439 66.667 9.46 6.30 46.23 3.71
99 100 2.124487 AGAGCCTCGACCGGAGAG 60.124 66.667 9.46 16.47 46.23 3.20
104 105 4.639776 CTCGACCGGAGAGGAGAA 57.360 61.111 9.46 0.00 46.23 2.87
105 106 2.099994 CTCGACCGGAGAGGAGAAC 58.900 63.158 9.46 0.00 46.23 3.01
106 107 1.707239 CTCGACCGGAGAGGAGAACG 61.707 65.000 9.46 0.00 46.23 3.95
107 108 1.744368 CGACCGGAGAGGAGAACGA 60.744 63.158 9.46 0.00 45.00 3.85
108 109 1.801983 GACCGGAGAGGAGAACGAC 59.198 63.158 9.46 0.00 45.00 4.34
109 110 1.979831 GACCGGAGAGGAGAACGACG 61.980 65.000 9.46 0.00 45.00 5.12
110 111 1.744368 CCGGAGAGGAGAACGACGA 60.744 63.158 0.00 0.00 45.00 4.20
111 112 1.303799 CCGGAGAGGAGAACGACGAA 61.304 60.000 0.00 0.00 45.00 3.85
112 113 0.179194 CGGAGAGGAGAACGACGAAC 60.179 60.000 0.00 0.00 0.00 3.95
113 114 1.166989 GGAGAGGAGAACGACGAACT 58.833 55.000 0.00 0.00 0.00 3.01
114 115 2.354259 GGAGAGGAGAACGACGAACTA 58.646 52.381 0.00 0.00 0.00 2.24
115 116 2.746362 GGAGAGGAGAACGACGAACTAA 59.254 50.000 0.00 0.00 0.00 2.24
116 117 3.181508 GGAGAGGAGAACGACGAACTAAG 60.182 52.174 0.00 0.00 0.00 2.18
117 118 2.748532 AGAGGAGAACGACGAACTAAGG 59.251 50.000 0.00 0.00 0.00 2.69
118 119 2.746362 GAGGAGAACGACGAACTAAGGA 59.254 50.000 0.00 0.00 0.00 3.36
119 120 3.152341 AGGAGAACGACGAACTAAGGAA 58.848 45.455 0.00 0.00 0.00 3.36
120 121 3.057666 AGGAGAACGACGAACTAAGGAAC 60.058 47.826 0.00 0.00 0.00 3.62
121 122 3.240884 GAGAACGACGAACTAAGGAACC 58.759 50.000 0.00 0.00 0.00 3.62
122 123 2.889678 AGAACGACGAACTAAGGAACCT 59.110 45.455 0.00 0.00 0.00 3.50
123 124 3.057666 AGAACGACGAACTAAGGAACCTC 60.058 47.826 0.00 0.00 0.00 3.85
124 125 2.233271 ACGACGAACTAAGGAACCTCA 58.767 47.619 0.00 0.00 0.00 3.86
125 126 2.030451 ACGACGAACTAAGGAACCTCAC 60.030 50.000 0.00 0.00 0.00 3.51
126 127 2.670509 CGACGAACTAAGGAACCTCACC 60.671 54.545 0.00 0.00 0.00 4.02
127 128 1.622312 ACGAACTAAGGAACCTCACCC 59.378 52.381 0.00 0.00 0.00 4.61
128 129 1.066358 CGAACTAAGGAACCTCACCCC 60.066 57.143 0.00 0.00 0.00 4.95
129 130 2.267192 GAACTAAGGAACCTCACCCCT 58.733 52.381 0.00 0.00 0.00 4.79
130 131 3.447950 GAACTAAGGAACCTCACCCCTA 58.552 50.000 0.00 0.00 0.00 3.53
131 132 3.572661 ACTAAGGAACCTCACCCCTAA 57.427 47.619 0.00 0.00 0.00 2.69
132 133 4.090027 ACTAAGGAACCTCACCCCTAAT 57.910 45.455 0.00 0.00 0.00 1.73
133 134 4.038633 ACTAAGGAACCTCACCCCTAATC 58.961 47.826 0.00 0.00 0.00 1.75
134 135 1.497161 AGGAACCTCACCCCTAATCG 58.503 55.000 0.00 0.00 0.00 3.34
135 136 0.179054 GGAACCTCACCCCTAATCGC 60.179 60.000 0.00 0.00 0.00 4.58
136 137 0.179054 GAACCTCACCCCTAATCGCC 60.179 60.000 0.00 0.00 0.00 5.54
137 138 0.620700 AACCTCACCCCTAATCGCCT 60.621 55.000 0.00 0.00 0.00 5.52
138 139 1.049289 ACCTCACCCCTAATCGCCTC 61.049 60.000 0.00 0.00 0.00 4.70
139 140 1.749033 CTCACCCCTAATCGCCTCC 59.251 63.158 0.00 0.00 0.00 4.30
140 141 2.088674 CTCACCCCTAATCGCCTCCG 62.089 65.000 0.00 0.00 0.00 4.63
141 142 3.547513 ACCCCTAATCGCCTCCGC 61.548 66.667 0.00 0.00 0.00 5.54
142 143 3.546543 CCCCTAATCGCCTCCGCA 61.547 66.667 0.00 0.00 34.03 5.69
143 144 2.504032 CCCTAATCGCCTCCGCAA 59.496 61.111 0.00 0.00 34.03 4.85
144 145 1.153249 CCCTAATCGCCTCCGCAAA 60.153 57.895 0.00 0.00 34.03 3.68
145 146 0.746563 CCCTAATCGCCTCCGCAAAA 60.747 55.000 0.00 0.00 34.03 2.44
146 147 0.657840 CCTAATCGCCTCCGCAAAAG 59.342 55.000 0.00 0.00 34.03 2.27
147 148 1.651987 CTAATCGCCTCCGCAAAAGA 58.348 50.000 0.00 0.00 34.03 2.52
148 149 1.327764 CTAATCGCCTCCGCAAAAGAC 59.672 52.381 0.00 0.00 34.03 3.01
149 150 1.635663 AATCGCCTCCGCAAAAGACG 61.636 55.000 0.00 0.00 34.03 4.18
156 157 4.371975 CGCAAAAGACGGAGGGAA 57.628 55.556 0.00 0.00 0.00 3.97
157 158 2.624169 CGCAAAAGACGGAGGGAAA 58.376 52.632 0.00 0.00 0.00 3.13
158 159 0.237498 CGCAAAAGACGGAGGGAAAC 59.763 55.000 0.00 0.00 0.00 2.78
159 160 0.237498 GCAAAAGACGGAGGGAAACG 59.763 55.000 0.00 0.00 0.00 3.60
160 161 0.237498 CAAAAGACGGAGGGAAACGC 59.763 55.000 0.00 0.00 0.00 4.84
161 162 0.108019 AAAAGACGGAGGGAAACGCT 59.892 50.000 0.00 0.00 0.00 5.07
162 163 0.602905 AAAGACGGAGGGAAACGCTG 60.603 55.000 0.00 0.00 0.00 5.18
163 164 1.469335 AAGACGGAGGGAAACGCTGA 61.469 55.000 0.00 0.00 0.00 4.26
164 165 1.737008 GACGGAGGGAAACGCTGAC 60.737 63.158 0.00 0.00 0.00 3.51
165 166 2.434359 CGGAGGGAAACGCTGACC 60.434 66.667 0.00 0.00 0.00 4.02
166 167 2.434359 GGAGGGAAACGCTGACCG 60.434 66.667 0.00 0.00 44.21 4.79
175 176 3.036084 CGCTGACCGTCACCACAC 61.036 66.667 0.00 0.00 0.00 3.82
176 177 3.036084 GCTGACCGTCACCACACG 61.036 66.667 0.00 0.00 39.61 4.49
195 196 2.311124 GGGACGGACAGGAAATACTG 57.689 55.000 0.00 0.00 44.03 2.74
196 197 1.653151 GGACGGACAGGAAATACTGC 58.347 55.000 0.00 0.00 42.21 4.40
197 198 1.207329 GGACGGACAGGAAATACTGCT 59.793 52.381 0.00 0.00 42.21 4.24
198 199 2.541556 GACGGACAGGAAATACTGCTC 58.458 52.381 0.00 0.00 42.21 4.26
199 200 1.135083 ACGGACAGGAAATACTGCTCG 60.135 52.381 6.66 6.66 42.21 5.03
200 201 1.291132 GGACAGGAAATACTGCTCGC 58.709 55.000 0.00 0.00 42.21 5.03
201 202 1.134670 GGACAGGAAATACTGCTCGCT 60.135 52.381 0.00 0.00 42.21 4.93
202 203 1.929836 GACAGGAAATACTGCTCGCTG 59.070 52.381 0.00 0.00 42.21 5.18
203 204 1.276421 ACAGGAAATACTGCTCGCTGT 59.724 47.619 6.66 6.66 42.21 4.40
204 205 1.929836 CAGGAAATACTGCTCGCTGTC 59.070 52.381 4.67 0.00 0.00 3.51
352 370 2.037902 TGTCAGGTTTTGCTATGACCGA 59.962 45.455 2.07 0.00 41.05 4.69
385 404 2.006888 CTACATCCGTTCAATGGCGTT 58.993 47.619 0.00 0.00 0.00 4.84
408 427 2.711922 GCTGGTGGGAGTCGTCGAT 61.712 63.158 0.00 0.00 0.00 3.59
504 524 1.200716 GCATGTGTAGCTGTTGCATGT 59.799 47.619 17.39 0.00 42.74 3.21
636 1838 1.748122 GGGGAGCTACGTGAGACGA 60.748 63.158 0.00 0.00 46.05 4.20
694 1896 3.586429 GAGGAGGAAGAAGATCTGGGAT 58.414 50.000 0.00 0.00 0.00 3.85
731 1940 1.269831 GCTAGATCGAACGGCCAGAAT 60.270 52.381 2.24 0.00 0.00 2.40
737 1946 1.546923 TCGAACGGCCAGAATAAGTGA 59.453 47.619 2.24 0.00 0.00 3.41
806 2018 1.017387 GCGCAGATTACTCCCCAAAG 58.983 55.000 0.30 0.00 0.00 2.77
807 2019 1.406887 GCGCAGATTACTCCCCAAAGA 60.407 52.381 0.30 0.00 0.00 2.52
808 2020 2.939640 GCGCAGATTACTCCCCAAAGAA 60.940 50.000 0.30 0.00 0.00 2.52
809 2021 3.343617 CGCAGATTACTCCCCAAAGAAA 58.656 45.455 0.00 0.00 0.00 2.52
810 2022 3.947834 CGCAGATTACTCCCCAAAGAAAT 59.052 43.478 0.00 0.00 0.00 2.17
811 2023 5.123227 CGCAGATTACTCCCCAAAGAAATA 58.877 41.667 0.00 0.00 0.00 1.40
812 2024 5.588648 CGCAGATTACTCCCCAAAGAAATAA 59.411 40.000 0.00 0.00 0.00 1.40
813 2025 6.458342 CGCAGATTACTCCCCAAAGAAATAAC 60.458 42.308 0.00 0.00 0.00 1.89
814 2026 6.377146 GCAGATTACTCCCCAAAGAAATAACA 59.623 38.462 0.00 0.00 0.00 2.41
815 2027 7.068716 GCAGATTACTCCCCAAAGAAATAACAT 59.931 37.037 0.00 0.00 0.00 2.71
816 2028 8.624776 CAGATTACTCCCCAAAGAAATAACATC 58.375 37.037 0.00 0.00 0.00 3.06
817 2029 8.336235 AGATTACTCCCCAAAGAAATAACATCA 58.664 33.333 0.00 0.00 0.00 3.07
818 2030 7.696992 TTACTCCCCAAAGAAATAACATCAC 57.303 36.000 0.00 0.00 0.00 3.06
819 2031 5.640147 ACTCCCCAAAGAAATAACATCACA 58.360 37.500 0.00 0.00 0.00 3.58
820 2032 5.476945 ACTCCCCAAAGAAATAACATCACAC 59.523 40.000 0.00 0.00 0.00 3.82
821 2033 4.770010 TCCCCAAAGAAATAACATCACACC 59.230 41.667 0.00 0.00 0.00 4.16
822 2034 4.526262 CCCCAAAGAAATAACATCACACCA 59.474 41.667 0.00 0.00 0.00 4.17
823 2035 5.469479 CCCAAAGAAATAACATCACACCAC 58.531 41.667 0.00 0.00 0.00 4.16
824 2036 5.010516 CCCAAAGAAATAACATCACACCACA 59.989 40.000 0.00 0.00 0.00 4.17
825 2037 6.462207 CCCAAAGAAATAACATCACACCACAA 60.462 38.462 0.00 0.00 0.00 3.33
826 2038 6.983307 CCAAAGAAATAACATCACACCACAAA 59.017 34.615 0.00 0.00 0.00 2.83
827 2039 7.493971 CCAAAGAAATAACATCACACCACAAAA 59.506 33.333 0.00 0.00 0.00 2.44
828 2040 8.877779 CAAAGAAATAACATCACACCACAAAAA 58.122 29.630 0.00 0.00 0.00 1.94
829 2041 8.647143 AAGAAATAACATCACACCACAAAAAG 57.353 30.769 0.00 0.00 0.00 2.27
830 2042 7.781056 AGAAATAACATCACACCACAAAAAGT 58.219 30.769 0.00 0.00 0.00 2.66
831 2043 7.920682 AGAAATAACATCACACCACAAAAAGTC 59.079 33.333 0.00 0.00 0.00 3.01
832 2044 6.707440 ATAACATCACACCACAAAAAGTCA 57.293 33.333 0.00 0.00 0.00 3.41
833 2045 4.637483 ACATCACACCACAAAAAGTCAG 57.363 40.909 0.00 0.00 0.00 3.51
834 2046 4.016444 ACATCACACCACAAAAAGTCAGT 58.984 39.130 0.00 0.00 0.00 3.41
835 2047 4.462483 ACATCACACCACAAAAAGTCAGTT 59.538 37.500 0.00 0.00 0.00 3.16
836 2048 4.433186 TCACACCACAAAAAGTCAGTTG 57.567 40.909 0.00 0.00 0.00 3.16
837 2049 3.823873 TCACACCACAAAAAGTCAGTTGT 59.176 39.130 0.00 0.00 38.49 3.32
841 2053 1.583404 CACAAAAAGTCAGTTGTGCGC 59.417 47.619 0.00 0.00 45.70 6.09
842 2054 1.199624 CAAAAAGTCAGTTGTGCGCC 58.800 50.000 4.18 0.00 0.00 6.53
843 2055 0.248458 AAAAAGTCAGTTGTGCGCCG 60.248 50.000 4.18 0.00 0.00 6.46
844 2056 2.058829 AAAAGTCAGTTGTGCGCCGG 62.059 55.000 4.18 0.00 0.00 6.13
856 2068 3.330853 CGCCGGCGCAGATTACTC 61.331 66.667 38.48 0.00 34.03 2.59
857 2069 2.107141 GCCGGCGCAGATTACTCT 59.893 61.111 12.58 0.00 34.03 3.24
858 2070 1.951631 GCCGGCGCAGATTACTCTC 60.952 63.158 12.58 0.00 34.03 3.20
859 2071 1.300233 CCGGCGCAGATTACTCTCC 60.300 63.158 10.83 0.00 0.00 3.71
860 2072 1.437573 CGGCGCAGATTACTCTCCA 59.562 57.895 10.83 0.00 0.00 3.86
861 2073 0.179111 CGGCGCAGATTACTCTCCAA 60.179 55.000 10.83 0.00 0.00 3.53
862 2074 1.739035 CGGCGCAGATTACTCTCCAAA 60.739 52.381 10.83 0.00 0.00 3.28
863 2075 1.936547 GGCGCAGATTACTCTCCAAAG 59.063 52.381 10.83 0.00 0.00 2.77
864 2076 2.418746 GGCGCAGATTACTCTCCAAAGA 60.419 50.000 10.83 0.00 0.00 2.52
865 2077 3.262420 GCGCAGATTACTCTCCAAAGAA 58.738 45.455 0.30 0.00 0.00 2.52
866 2078 3.684788 GCGCAGATTACTCTCCAAAGAAA 59.315 43.478 0.30 0.00 0.00 2.52
871 2083 7.064609 CGCAGATTACTCTCCAAAGAAATAACA 59.935 37.037 0.00 0.00 0.00 2.41
907 2119 3.316308 AGTCAGTTCATCAAACACAAGCC 59.684 43.478 0.00 0.00 40.56 4.35
908 2120 3.066621 GTCAGTTCATCAAACACAAGCCA 59.933 43.478 0.00 0.00 40.56 4.75
909 2121 3.066621 TCAGTTCATCAAACACAAGCCAC 59.933 43.478 0.00 0.00 40.56 5.01
910 2122 3.067180 CAGTTCATCAAACACAAGCCACT 59.933 43.478 0.00 0.00 40.56 4.00
911 2123 3.067180 AGTTCATCAAACACAAGCCACTG 59.933 43.478 0.00 0.00 40.56 3.66
912 2124 1.955778 TCATCAAACACAAGCCACTGG 59.044 47.619 0.00 0.00 0.00 4.00
913 2125 1.682854 CATCAAACACAAGCCACTGGT 59.317 47.619 0.00 0.00 0.00 4.00
914 2126 1.102154 TCAAACACAAGCCACTGGTG 58.898 50.000 0.48 0.48 40.93 4.17
915 2127 0.528249 CAAACACAAGCCACTGGTGC 60.528 55.000 1.96 0.00 38.88 5.01
916 2128 0.684153 AAACACAAGCCACTGGTGCT 60.684 50.000 1.96 0.00 38.88 4.40
918 2130 1.103398 ACACAAGCCACTGGTGCTTC 61.103 55.000 1.96 0.00 45.58 3.86
919 2131 1.102809 CACAAGCCACTGGTGCTTCA 61.103 55.000 3.36 0.00 45.58 3.02
920 2132 0.395586 ACAAGCCACTGGTGCTTCAA 60.396 50.000 3.36 0.00 45.58 2.69
921 2133 0.746063 CAAGCCACTGGTGCTTCAAA 59.254 50.000 3.36 0.00 45.58 2.69
922 2134 1.136695 CAAGCCACTGGTGCTTCAAAA 59.863 47.619 3.36 0.00 45.58 2.44
923 2135 1.484038 AGCCACTGGTGCTTCAAAAA 58.516 45.000 0.00 0.00 34.87 1.94
1048 2260 0.394216 ATGCTTCGCCTGTGCCAATA 60.394 50.000 0.00 0.00 0.00 1.90
1114 2332 1.300697 CTACGCATCCCGCCTTACC 60.301 63.158 0.00 0.00 41.76 2.85
1115 2333 2.023414 CTACGCATCCCGCCTTACCA 62.023 60.000 0.00 0.00 41.76 3.25
1284 2502 2.028839 TGGTCGGAGATTCGCTTGTTTA 60.029 45.455 0.00 0.00 40.67 2.01
1349 2567 2.148768 TCAGTTAACTCAGCTCGTCGA 58.851 47.619 4.77 0.00 0.00 4.20
1373 2594 8.765219 CGAATCTCCTTATTAATCGTGTGAATT 58.235 33.333 0.00 0.00 0.00 2.17
1600 2829 2.633488 GAAGATTTAGCCAAGGACGCT 58.367 47.619 0.00 0.00 40.45 5.07
1606 2835 5.652452 AGATTTAGCCAAGGACGCTTTTAAT 59.348 36.000 0.00 0.00 37.79 1.40
1787 3018 0.669077 AACGTAGAGCTATGCCTCCG 59.331 55.000 0.00 0.00 32.17 4.63
1808 3039 2.358247 TCCGAGCTCGCAAAACCC 60.358 61.111 30.49 0.00 38.18 4.11
1844 3075 1.071605 GCATACGGATCGATTCCAGC 58.928 55.000 0.00 0.00 45.78 4.85
2119 3352 1.340017 ACAGCCGGATTATGTTGTGCT 60.340 47.619 5.05 0.00 0.00 4.40
2217 3450 3.521560 TGTGCGTTATGAAGATGAGGTC 58.478 45.455 0.00 0.00 0.00 3.85
2233 3466 5.277876 GATGAGGTCATTAGCTGATGCTTTG 60.278 44.000 13.45 0.00 40.98 2.77
2285 3518 6.150140 GGGATATCAGGTTGCTGATTATGTTC 59.850 42.308 4.83 0.00 43.16 3.18
2294 3527 7.284034 AGGTTGCTGATTATGTTCTCTATTTGG 59.716 37.037 0.00 0.00 0.00 3.28
2466 3699 3.385433 TCAGGTGAACCGTCTTTCTGTTA 59.615 43.478 0.00 0.00 42.08 2.41
2630 3863 4.397103 TCCAATGAGCAGAACAATGTCATC 59.603 41.667 0.00 0.00 0.00 2.92
3173 4410 2.552315 CGCACTTGGTGGTTATGTCTTT 59.448 45.455 0.00 0.00 33.64 2.52
3207 4444 8.894768 ATGCAGTTGTCTTATTCTTATAGACC 57.105 34.615 0.00 0.00 0.00 3.85
3245 4482 9.267084 TCGCTTACATTATTTATGCACTTGATA 57.733 29.630 0.00 0.00 37.81 2.15
3286 4523 8.705594 TCAGGGATGAAATTAGTTACTTCTAGG 58.294 37.037 0.00 0.00 0.00 3.02
3601 4838 2.411547 GGAGATGCAAACGTTGAAGTCG 60.412 50.000 0.00 0.00 0.00 4.18
3648 4885 2.041620 ACCTGCTGAGCCTTTAAATGGA 59.958 45.455 0.23 0.00 0.00 3.41
3662 4899 6.405176 CCTTTAAATGGAGAGAAACCTCATGC 60.405 42.308 0.00 0.00 34.94 4.06
3675 4915 4.112634 ACCTCATGCCCTTAAACTTGAA 57.887 40.909 0.00 0.00 0.00 2.69
3849 5092 5.825679 ACCTTGCACTTAAAATACTCACACA 59.174 36.000 0.00 0.00 0.00 3.72
3999 5242 3.356529 ACAAGAACATGGGTCATCTCC 57.643 47.619 0.00 0.00 0.00 3.71
4186 5429 1.832167 GCCACACCAAAAGGAGGCA 60.832 57.895 0.00 0.00 41.63 4.75
4243 5486 6.882678 TGATCTCTTTCAATCATTTCTGCTCA 59.117 34.615 0.00 0.00 0.00 4.26
4244 5487 6.492007 TCTCTTTCAATCATTTCTGCTCAC 57.508 37.500 0.00 0.00 0.00 3.51
4246 5489 5.072055 TCTTTCAATCATTTCTGCTCACCA 58.928 37.500 0.00 0.00 0.00 4.17
4247 5490 4.771590 TTCAATCATTTCTGCTCACCAC 57.228 40.909 0.00 0.00 0.00 4.16
4249 5492 5.164620 TCAATCATTTCTGCTCACCACTA 57.835 39.130 0.00 0.00 0.00 2.74
4251 5494 6.182627 TCAATCATTTCTGCTCACCACTATT 58.817 36.000 0.00 0.00 0.00 1.73
4252 5495 6.094464 TCAATCATTTCTGCTCACCACTATTG 59.906 38.462 0.00 0.00 0.00 1.90
4253 5496 4.910195 TCATTTCTGCTCACCACTATTGT 58.090 39.130 0.00 0.00 0.00 2.71
4254 5497 4.696877 TCATTTCTGCTCACCACTATTGTG 59.303 41.667 0.00 0.00 43.45 3.33
4255 5498 4.350368 TTTCTGCTCACCACTATTGTGA 57.650 40.909 8.98 0.00 46.55 3.58
4256 5499 4.558226 TTCTGCTCACCACTATTGTGAT 57.442 40.909 8.98 0.00 46.55 3.06
4257 5500 3.865446 TCTGCTCACCACTATTGTGATG 58.135 45.455 8.98 1.63 46.55 3.07
4258 5501 2.941064 CTGCTCACCACTATTGTGATGG 59.059 50.000 8.98 0.00 46.55 3.51
4264 5507 3.443681 CACCACTATTGTGATGGTTTCCC 59.556 47.826 8.98 0.00 44.51 3.97
4276 5519 3.885976 TGGTTTCCCCTGTTGTGATTA 57.114 42.857 0.00 0.00 0.00 1.75
4614 5857 7.197071 TGGTGTTAAACTTACTGCTACATTG 57.803 36.000 0.00 0.00 0.00 2.82
4773 6017 7.342026 ACAACAGTTTTCCTCTTCTTTGGTTAT 59.658 33.333 0.00 0.00 0.00 1.89
4837 6081 9.678260 TGCATAATTTTTGCAATTTAATACCCT 57.322 25.926 11.41 0.00 46.48 4.34
4940 6184 4.344102 TCCCTATAATTGGTGAAGGAGACG 59.656 45.833 0.00 0.00 0.00 4.18
5034 6279 6.349300 TCTAGGGCTGCTACTTCATAAAAAG 58.651 40.000 0.00 0.00 0.00 2.27
5074 6319 7.222805 ACTGCTACATTAAACACATAGTCATCG 59.777 37.037 0.00 0.00 0.00 3.84
5089 6334 5.012328 AGTCATCGAGTTGAAATAGACCC 57.988 43.478 0.00 0.00 0.00 4.46
5096 6341 6.570692 TCGAGTTGAAATAGACCCTATTGTC 58.429 40.000 0.00 0.00 35.43 3.18
5217 6462 6.840780 AATGAAATTGTAAGAAGAGGGGTG 57.159 37.500 0.00 0.00 33.44 4.61
5331 6576 6.071165 CCCTTCTTTTGGATTAGTCATGCTTT 60.071 38.462 0.00 0.00 0.00 3.51
5341 6586 5.880054 TTAGTCATGCTTTGAGGTTAAGC 57.120 39.130 0.00 0.00 46.33 3.09
5700 6946 1.096416 GTGGACTCCCTCTAGACACG 58.904 60.000 0.00 0.00 0.00 4.49
5791 7037 2.125350 GGACGCTCTGGGAAGCTG 60.125 66.667 0.00 0.00 40.23 4.24
5883 7129 4.156455 TGGAGAAGAAGACAGCAAAGTT 57.844 40.909 0.00 0.00 0.00 2.66
5939 7185 4.981647 AGGGGTATTATGGGTTCTGAATGA 59.018 41.667 0.00 0.00 0.00 2.57
5944 7190 8.704668 GGGTATTATGGGTTCTGAATGATTTTT 58.295 33.333 0.00 0.00 0.00 1.94
6103 7349 1.081175 GCTGCAAGGGAAAGCGTTC 60.081 57.895 3.53 3.53 0.00 3.95
6247 7493 2.226437 ACCAGCATGTGAAGCTTTAACG 59.774 45.455 0.00 0.00 41.14 3.18
6250 7496 3.665409 CAGCATGTGAAGCTTTAACGTTG 59.335 43.478 11.99 6.10 41.14 4.10
6306 7552 7.362056 GCTTTCTGTGCAATTGAGTTATCCTTA 60.362 37.037 10.34 0.00 0.00 2.69
6327 7573 9.582648 TCCTTATGTGATACTGCAACTAGTATA 57.417 33.333 0.00 0.00 42.38 1.47
6381 7628 9.326413 TGGTGCTTCTTAATTCTTTAGTATAGC 57.674 33.333 0.00 0.00 0.00 2.97
6382 7629 8.775527 GGTGCTTCTTAATTCTTTAGTATAGCC 58.224 37.037 0.00 0.00 0.00 3.93
6383 7630 8.488764 GTGCTTCTTAATTCTTTAGTATAGCCG 58.511 37.037 0.00 0.00 0.00 5.52
6384 7631 7.656137 TGCTTCTTAATTCTTTAGTATAGCCGG 59.344 37.037 0.00 0.00 0.00 6.13
6385 7632 7.656542 GCTTCTTAATTCTTTAGTATAGCCGGT 59.343 37.037 1.90 0.00 0.00 5.28
6388 7635 4.886496 ATTCTTTAGTATAGCCGGTCCC 57.114 45.455 1.90 0.00 0.00 4.46
6392 7639 1.335145 TAGTATAGCCGGTCCCAAGC 58.665 55.000 1.90 0.00 0.00 4.01
6393 7640 1.070957 GTATAGCCGGTCCCAAGCC 59.929 63.158 1.90 0.00 0.00 4.35
6403 7650 2.044352 CCCAAGCCCGGGTAAAGG 60.044 66.667 24.63 18.41 41.83 3.11
6404 7651 2.608550 CCCAAGCCCGGGTAAAGGA 61.609 63.158 24.63 0.00 41.83 3.36
6406 7653 1.077716 CAAGCCCGGGTAAAGGAGG 60.078 63.158 24.63 0.00 0.00 4.30
6407 7654 1.229723 AAGCCCGGGTAAAGGAGGA 60.230 57.895 24.63 0.00 0.00 3.71
6409 7656 2.743179 GCCCGGGTAAAGGAGGAGG 61.743 68.421 24.63 0.00 0.00 4.30
6410 7657 2.070650 CCCGGGTAAAGGAGGAGGG 61.071 68.421 14.18 0.00 0.00 4.30
6411 7658 1.306739 CCGGGTAAAGGAGGAGGGT 60.307 63.158 0.00 0.00 0.00 4.34
6412 7659 0.912968 CCGGGTAAAGGAGGAGGGTT 60.913 60.000 0.00 0.00 0.00 4.11
6413 7660 0.252197 CGGGTAAAGGAGGAGGGTTG 59.748 60.000 0.00 0.00 0.00 3.77
6414 7661 1.369403 GGGTAAAGGAGGAGGGTTGT 58.631 55.000 0.00 0.00 0.00 3.32
6415 7662 1.004394 GGGTAAAGGAGGAGGGTTGTG 59.996 57.143 0.00 0.00 0.00 3.33
6416 7663 1.982958 GGTAAAGGAGGAGGGTTGTGA 59.017 52.381 0.00 0.00 0.00 3.58
6417 7664 2.576648 GGTAAAGGAGGAGGGTTGTGAT 59.423 50.000 0.00 0.00 0.00 3.06
6419 7666 4.141688 GGTAAAGGAGGAGGGTTGTGATAG 60.142 50.000 0.00 0.00 0.00 2.08
6421 7668 0.470341 GGAGGAGGGTTGTGATAGGC 59.530 60.000 0.00 0.00 0.00 3.93
6423 7670 1.139853 GAGGAGGGTTGTGATAGGCAG 59.860 57.143 0.00 0.00 0.00 4.85
6425 7672 0.811616 GAGGGTTGTGATAGGCAGCG 60.812 60.000 0.00 0.00 0.00 5.18
6428 7675 1.432270 GGTTGTGATAGGCAGCGAGC 61.432 60.000 0.00 0.00 44.65 5.03
6438 7685 1.572447 GCAGCGAGCCAACGTAAAA 59.428 52.632 0.00 0.00 37.23 1.52
6439 7686 0.040781 GCAGCGAGCCAACGTAAAAA 60.041 50.000 0.00 0.00 37.23 1.94
6440 7687 1.670326 CAGCGAGCCAACGTAAAAAC 58.330 50.000 0.00 0.00 35.59 2.43
6441 7688 1.263217 CAGCGAGCCAACGTAAAAACT 59.737 47.619 0.00 0.00 35.59 2.66
6442 7689 1.529865 AGCGAGCCAACGTAAAAACTC 59.470 47.619 0.00 0.00 35.59 3.01
6445 7692 2.661979 CGAGCCAACGTAAAAACTCAGC 60.662 50.000 0.00 0.00 0.00 4.26
6446 7693 1.607148 AGCCAACGTAAAAACTCAGCC 59.393 47.619 0.00 0.00 0.00 4.85
6449 7696 2.616842 CCAACGTAAAAACTCAGCCACT 59.383 45.455 0.00 0.00 0.00 4.00
6450 7697 3.303791 CCAACGTAAAAACTCAGCCACTC 60.304 47.826 0.00 0.00 0.00 3.51
6452 7699 3.805207 ACGTAAAAACTCAGCCACTCTT 58.195 40.909 0.00 0.00 0.00 2.85
6455 7702 5.408604 ACGTAAAAACTCAGCCACTCTTATG 59.591 40.000 0.00 0.00 0.00 1.90
6456 7703 5.163854 CGTAAAAACTCAGCCACTCTTATGG 60.164 44.000 0.00 0.00 43.26 2.74
6457 7704 4.640771 AAAACTCAGCCACTCTTATGGA 57.359 40.909 0.00 0.00 43.02 3.41
6458 7705 3.902881 AACTCAGCCACTCTTATGGAG 57.097 47.619 0.00 0.00 43.02 3.86
6460 7707 3.652055 ACTCAGCCACTCTTATGGAGAT 58.348 45.455 0.00 0.00 44.45 2.75
6463 7710 4.033009 TCAGCCACTCTTATGGAGATGAA 58.967 43.478 0.00 0.00 44.45 2.57
6465 7712 4.574013 CAGCCACTCTTATGGAGATGAAAC 59.426 45.833 0.00 0.00 44.45 2.78
6466 7713 3.879892 GCCACTCTTATGGAGATGAAACC 59.120 47.826 0.00 0.00 44.45 3.27
6467 7714 4.455606 CCACTCTTATGGAGATGAAACCC 58.544 47.826 4.83 0.00 44.45 4.11
6470 7717 5.945784 CACTCTTATGGAGATGAAACCCAAA 59.054 40.000 4.83 0.00 44.45 3.28
6471 7718 6.434028 CACTCTTATGGAGATGAAACCCAAAA 59.566 38.462 4.83 0.00 44.45 2.44
6472 7719 6.660949 ACTCTTATGGAGATGAAACCCAAAAG 59.339 38.462 4.83 0.00 44.45 2.27
6473 7720 6.789268 TCTTATGGAGATGAAACCCAAAAGA 58.211 36.000 0.00 0.00 33.15 2.52
6474 7721 7.413446 TCTTATGGAGATGAAACCCAAAAGAT 58.587 34.615 0.00 0.00 33.15 2.40
6475 7722 7.895429 TCTTATGGAGATGAAACCCAAAAGATT 59.105 33.333 0.00 0.00 33.15 2.40
6476 7723 6.940430 ATGGAGATGAAACCCAAAAGATTT 57.060 33.333 0.00 0.00 33.15 2.17
6477 7724 6.745794 TGGAGATGAAACCCAAAAGATTTT 57.254 33.333 0.00 0.00 0.00 1.82
6478 7725 6.758254 TGGAGATGAAACCCAAAAGATTTTC 58.242 36.000 0.00 0.00 0.00 2.29
6480 7727 6.405278 AGATGAAACCCAAAAGATTTTCGT 57.595 33.333 0.00 0.00 31.76 3.85
6481 7728 6.816136 AGATGAAACCCAAAAGATTTTCGTT 58.184 32.000 0.00 0.00 31.76 3.85
6486 7733 2.412870 CCAAAAGATTTTCGTTGGGGC 58.587 47.619 0.00 0.00 34.69 5.80
6488 7735 3.556843 CCAAAAGATTTTCGTTGGGGCAT 60.557 43.478 0.00 0.00 34.69 4.40
6489 7736 4.322349 CCAAAAGATTTTCGTTGGGGCATA 60.322 41.667 0.00 0.00 34.69 3.14
6491 7738 4.450082 AAGATTTTCGTTGGGGCATAAC 57.550 40.909 0.00 0.00 0.00 1.89
6492 7739 2.758423 AGATTTTCGTTGGGGCATAACC 59.242 45.455 0.00 0.00 37.93 2.85
6502 7749 3.882131 GGCATAACCCTCTCAGCAA 57.118 52.632 0.00 0.00 0.00 3.91
6503 7750 1.383523 GGCATAACCCTCTCAGCAAC 58.616 55.000 0.00 0.00 0.00 4.17
6504 7751 1.009829 GCATAACCCTCTCAGCAACG 58.990 55.000 0.00 0.00 0.00 4.10
6505 7752 1.009829 CATAACCCTCTCAGCAACGC 58.990 55.000 0.00 0.00 0.00 4.84
6506 7753 0.460284 ATAACCCTCTCAGCAACGCG 60.460 55.000 3.53 3.53 0.00 6.01
6510 7757 3.782244 CTCTCAGCAACGCGCCAC 61.782 66.667 5.73 0.00 44.04 5.01
6511 7758 4.600576 TCTCAGCAACGCGCCACA 62.601 61.111 5.73 0.00 44.04 4.17
6512 7759 3.425713 CTCAGCAACGCGCCACAT 61.426 61.111 5.73 0.00 44.04 3.21
6513 7760 3.372676 CTCAGCAACGCGCCACATC 62.373 63.158 5.73 0.00 44.04 3.06
6514 7761 4.799473 CAGCAACGCGCCACATCG 62.799 66.667 5.73 0.00 44.04 3.84
6516 7763 4.794241 GCAACGCGCCACATCGAC 62.794 66.667 5.73 0.00 32.94 4.20
6517 7764 4.147322 CAACGCGCCACATCGACC 62.147 66.667 5.73 0.00 0.00 4.79
6524 7771 3.702048 CCACATCGACCCGGGTGT 61.702 66.667 36.01 20.91 33.38 4.16
6525 7772 2.434185 CACATCGACCCGGGTGTG 60.434 66.667 36.01 28.19 37.46 3.82
6526 7773 3.702048 ACATCGACCCGGGTGTGG 61.702 66.667 36.01 20.36 0.00 4.17
6527 7774 3.702048 CATCGACCCGGGTGTGGT 61.702 66.667 36.01 17.79 39.32 4.16
6528 7775 3.702048 ATCGACCCGGGTGTGGTG 61.702 66.667 36.01 15.40 35.85 4.17
6533 7780 4.904590 CCCGGGTGTGGTGGCAAA 62.905 66.667 14.18 0.00 0.00 3.68
6534 7781 2.600173 CCGGGTGTGGTGGCAAAT 60.600 61.111 0.00 0.00 0.00 2.32
6535 7782 2.650196 CGGGTGTGGTGGCAAATG 59.350 61.111 0.00 0.00 0.00 2.32
6536 7783 2.929903 CGGGTGTGGTGGCAAATGG 61.930 63.158 0.00 0.00 0.00 3.16
6537 7784 2.582493 GGGTGTGGTGGCAAATGGG 61.582 63.158 0.00 0.00 0.00 4.00
6538 7785 2.343387 GTGTGGTGGCAAATGGGC 59.657 61.111 0.00 0.00 43.73 5.36
6580 7827 3.192922 GTGGCGCGCCGTATCTTT 61.193 61.111 41.73 0.00 39.42 2.52
6581 7828 2.888534 TGGCGCGCCGTATCTTTC 60.889 61.111 41.73 18.00 39.42 2.62
6582 7829 3.637030 GGCGCGCCGTATCTTTCC 61.637 66.667 37.24 7.78 0.00 3.13
6583 7830 3.984765 GCGCGCCGTATCTTTCCG 61.985 66.667 23.24 0.00 0.00 4.30
6584 7831 3.327754 CGCGCCGTATCTTTCCGG 61.328 66.667 0.00 0.00 46.90 5.14
6600 7847 2.203070 GGATACGGTGGCTGCCAG 60.203 66.667 24.10 14.28 32.34 4.85
6601 7848 2.731571 GGATACGGTGGCTGCCAGA 61.732 63.158 24.10 8.33 32.34 3.86
6602 7849 1.227380 GATACGGTGGCTGCCAGAG 60.227 63.158 24.10 20.61 32.34 3.35
6610 7857 2.271497 GCTGCCAGAGCCATGAGT 59.729 61.111 0.00 0.00 42.54 3.41
6611 7858 1.378250 GCTGCCAGAGCCATGAGTT 60.378 57.895 0.00 0.00 42.54 3.01
6612 7859 1.654954 GCTGCCAGAGCCATGAGTTG 61.655 60.000 0.00 0.00 42.54 3.16
6621 7868 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
6622 7869 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
6623 7870 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
6624 7871 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
6625 7872 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
6626 7873 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
6627 7874 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
6628 7875 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
6629 7876 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
6630 7877 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
6631 7878 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
6632 7879 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
6633 7880 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
6634 7881 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
6635 7882 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
6636 7883 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
6637 7884 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
6638 7885 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
6639 7886 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
6640 7887 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
6641 7888 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
6642 7889 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
6643 7890 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
6644 7891 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
6645 7892 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
6646 7893 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
6647 7894 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
6648 7895 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
6649 7896 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
6650 7897 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
6651 7898 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
6652 7899 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
6653 7900 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
6654 7901 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
6655 7902 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
6656 7903 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
6657 7904 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
6658 7905 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
6659 7906 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
6660 7907 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
6671 7918 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
6672 7919 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
6673 7920 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
6674 7921 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
6675 7922 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
6676 7923 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
6677 7924 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
6678 7925 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
6679 7926 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
6684 7931 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
6700 7947 1.214175 TGTTGTTGTGACTGGTGGGAT 59.786 47.619 0.00 0.00 0.00 3.85
6707 7954 1.482593 GTGACTGGTGGGATAGGAGTG 59.517 57.143 0.00 0.00 0.00 3.51
6738 7992 3.380320 CCTTTTGTGAGGGACGAGTTTTT 59.620 43.478 0.00 0.00 32.94 1.94
6824 8083 7.934120 AGCTTGAGACTCAAATACACTTTAACT 59.066 33.333 18.26 0.00 35.73 2.24
6829 8088 9.909644 GAGACTCAAATACACTTTAACTAGTGA 57.090 33.333 13.09 0.00 46.72 3.41
6893 8152 6.045072 ACTCATGAATTTGATGGCATGTTT 57.955 33.333 3.81 0.00 39.22 2.83
6997 8256 2.957680 TGTTTCCATGTGCACACAGAAT 59.042 40.909 24.37 2.07 45.48 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.358737 CTTCCGCTTCGTTGCCCT 60.359 61.111 0.00 0.00 0.00 5.19
1 2 2.358247 TCTTCCGCTTCGTTGCCC 60.358 61.111 0.00 0.00 0.00 5.36
2 3 0.949105 TTCTCTTCCGCTTCGTTGCC 60.949 55.000 0.00 0.00 0.00 4.52
3 4 1.079503 ATTCTCTTCCGCTTCGTTGC 58.920 50.000 0.00 0.00 0.00 4.17
4 5 1.394917 CCATTCTCTTCCGCTTCGTTG 59.605 52.381 0.00 0.00 0.00 4.10
5 6 1.676014 CCCATTCTCTTCCGCTTCGTT 60.676 52.381 0.00 0.00 0.00 3.85
6 7 0.108138 CCCATTCTCTTCCGCTTCGT 60.108 55.000 0.00 0.00 0.00 3.85
7 8 0.811616 CCCCATTCTCTTCCGCTTCG 60.812 60.000 0.00 0.00 0.00 3.79
8 9 1.098129 GCCCCATTCTCTTCCGCTTC 61.098 60.000 0.00 0.00 0.00 3.86
9 10 1.077429 GCCCCATTCTCTTCCGCTT 60.077 57.895 0.00 0.00 0.00 4.68
10 11 2.592308 GCCCCATTCTCTTCCGCT 59.408 61.111 0.00 0.00 0.00 5.52
11 12 2.897350 CGCCCCATTCTCTTCCGC 60.897 66.667 0.00 0.00 0.00 5.54
12 13 2.203070 CCGCCCCATTCTCTTCCG 60.203 66.667 0.00 0.00 0.00 4.30
13 14 2.193248 CCCGCCCCATTCTCTTCC 59.807 66.667 0.00 0.00 0.00 3.46
14 15 1.147153 CTCCCGCCCCATTCTCTTC 59.853 63.158 0.00 0.00 0.00 2.87
15 16 3.049080 GCTCCCGCCCCATTCTCTT 62.049 63.158 0.00 0.00 0.00 2.85
16 17 3.483869 GCTCCCGCCCCATTCTCT 61.484 66.667 0.00 0.00 0.00 3.10
17 18 3.764160 CTGCTCCCGCCCCATTCTC 62.764 68.421 0.00 0.00 34.43 2.87
18 19 3.801997 CTGCTCCCGCCCCATTCT 61.802 66.667 0.00 0.00 34.43 2.40
30 31 4.074526 TCAGTCCTGCCGCTGCTC 62.075 66.667 0.70 0.00 38.71 4.26
31 32 4.079850 CTCAGTCCTGCCGCTGCT 62.080 66.667 0.70 0.00 38.71 4.24
32 33 4.074526 TCTCAGTCCTGCCGCTGC 62.075 66.667 0.00 0.00 38.26 5.25
33 34 2.183811 CTCTCAGTCCTGCCGCTG 59.816 66.667 0.00 0.00 0.00 5.18
34 35 2.036414 TCTCTCAGTCCTGCCGCT 59.964 61.111 0.00 0.00 0.00 5.52
35 36 2.183046 GTCTCTCAGTCCTGCCGC 59.817 66.667 0.00 0.00 0.00 6.53
36 37 1.943116 CTGGTCTCTCAGTCCTGCCG 61.943 65.000 0.00 0.00 0.00 5.69
37 38 1.612395 CCTGGTCTCTCAGTCCTGCC 61.612 65.000 0.00 0.00 33.14 4.85
38 39 1.896694 CCTGGTCTCTCAGTCCTGC 59.103 63.158 0.00 0.00 33.14 4.85
39 40 1.896694 GCCTGGTCTCTCAGTCCTG 59.103 63.158 0.00 0.00 33.14 3.86
40 41 1.680651 CGCCTGGTCTCTCAGTCCT 60.681 63.158 0.00 0.00 33.14 3.85
41 42 2.716017 CCGCCTGGTCTCTCAGTCC 61.716 68.421 0.00 0.00 33.14 3.85
42 43 2.716017 CCCGCCTGGTCTCTCAGTC 61.716 68.421 0.00 0.00 33.14 3.51
43 44 2.681778 CCCGCCTGGTCTCTCAGT 60.682 66.667 0.00 0.00 33.14 3.41
44 45 4.154347 GCCCGCCTGGTCTCTCAG 62.154 72.222 0.00 0.00 36.04 3.35
68 69 3.812019 CTCTGGTCCCGTCCGTCG 61.812 72.222 0.00 0.00 39.52 5.12
69 70 4.131088 GCTCTGGTCCCGTCCGTC 62.131 72.222 0.00 0.00 0.00 4.79
72 73 3.462678 GAGGCTCTGGTCCCGTCC 61.463 72.222 7.40 0.00 0.00 4.79
73 74 3.827898 CGAGGCTCTGGTCCCGTC 61.828 72.222 13.50 0.00 0.00 4.79
74 75 4.361971 TCGAGGCTCTGGTCCCGT 62.362 66.667 13.50 0.00 0.00 5.28
75 76 3.827898 GTCGAGGCTCTGGTCCCG 61.828 72.222 13.50 0.00 0.00 5.14
76 77 3.462678 GGTCGAGGCTCTGGTCCC 61.463 72.222 13.50 1.24 0.00 4.46
77 78 3.827898 CGGTCGAGGCTCTGGTCC 61.828 72.222 13.50 8.26 0.00 4.46
78 79 3.827898 CCGGTCGAGGCTCTGGTC 61.828 72.222 13.50 0.12 0.00 4.02
79 80 4.361971 TCCGGTCGAGGCTCTGGT 62.362 66.667 13.50 0.00 0.00 4.00
80 81 3.522731 CTCCGGTCGAGGCTCTGG 61.523 72.222 13.50 9.06 34.67 3.86
81 82 2.438614 TCTCCGGTCGAGGCTCTG 60.439 66.667 13.50 6.48 39.30 3.35
82 83 2.124487 CTCTCCGGTCGAGGCTCT 60.124 66.667 13.50 0.00 39.30 4.09
83 84 3.213402 CCTCTCCGGTCGAGGCTC 61.213 72.222 23.13 3.87 41.39 4.70
84 85 3.707640 CTCCTCTCCGGTCGAGGCT 62.708 68.421 27.24 0.00 46.11 4.58
85 86 3.213402 CTCCTCTCCGGTCGAGGC 61.213 72.222 27.24 0.00 46.11 4.70
87 88 1.707239 CGTTCTCCTCTCCGGTCGAG 61.707 65.000 14.11 14.11 40.30 4.04
88 89 1.744368 CGTTCTCCTCTCCGGTCGA 60.744 63.158 0.00 0.00 0.00 4.20
89 90 1.744368 TCGTTCTCCTCTCCGGTCG 60.744 63.158 0.00 0.00 0.00 4.79
90 91 1.801983 GTCGTTCTCCTCTCCGGTC 59.198 63.158 0.00 0.00 0.00 4.79
91 92 2.039405 CGTCGTTCTCCTCTCCGGT 61.039 63.158 0.00 0.00 0.00 5.28
92 93 1.303799 TTCGTCGTTCTCCTCTCCGG 61.304 60.000 0.00 0.00 0.00 5.14
93 94 0.179194 GTTCGTCGTTCTCCTCTCCG 60.179 60.000 0.00 0.00 0.00 4.63
94 95 1.166989 AGTTCGTCGTTCTCCTCTCC 58.833 55.000 0.00 0.00 0.00 3.71
95 96 3.181508 CCTTAGTTCGTCGTTCTCCTCTC 60.182 52.174 0.00 0.00 0.00 3.20
96 97 2.748532 CCTTAGTTCGTCGTTCTCCTCT 59.251 50.000 0.00 0.00 0.00 3.69
97 98 2.746362 TCCTTAGTTCGTCGTTCTCCTC 59.254 50.000 0.00 0.00 0.00 3.71
98 99 2.787994 TCCTTAGTTCGTCGTTCTCCT 58.212 47.619 0.00 0.00 0.00 3.69
99 100 3.240884 GTTCCTTAGTTCGTCGTTCTCC 58.759 50.000 0.00 0.00 0.00 3.71
100 101 3.057666 AGGTTCCTTAGTTCGTCGTTCTC 60.058 47.826 0.00 0.00 0.00 2.87
101 102 2.889678 AGGTTCCTTAGTTCGTCGTTCT 59.110 45.455 0.00 0.00 0.00 3.01
102 103 3.240884 GAGGTTCCTTAGTTCGTCGTTC 58.759 50.000 0.00 0.00 0.00 3.95
103 104 2.624838 TGAGGTTCCTTAGTTCGTCGTT 59.375 45.455 0.00 0.00 0.00 3.85
104 105 2.030451 GTGAGGTTCCTTAGTTCGTCGT 60.030 50.000 0.00 0.00 0.00 4.34
105 106 2.593257 GTGAGGTTCCTTAGTTCGTCG 58.407 52.381 0.00 0.00 0.00 5.12
106 107 2.353505 GGGTGAGGTTCCTTAGTTCGTC 60.354 54.545 0.00 0.00 0.00 4.20
107 108 1.622312 GGGTGAGGTTCCTTAGTTCGT 59.378 52.381 0.00 0.00 0.00 3.85
108 109 1.066358 GGGGTGAGGTTCCTTAGTTCG 60.066 57.143 0.00 0.00 0.00 3.95
109 110 2.267192 AGGGGTGAGGTTCCTTAGTTC 58.733 52.381 0.00 0.00 0.00 3.01
110 111 2.435203 AGGGGTGAGGTTCCTTAGTT 57.565 50.000 0.00 0.00 0.00 2.24
111 112 3.572661 TTAGGGGTGAGGTTCCTTAGT 57.427 47.619 0.00 0.00 32.46 2.24
112 113 3.069729 CGATTAGGGGTGAGGTTCCTTAG 59.930 52.174 0.00 0.00 32.46 2.18
113 114 3.036091 CGATTAGGGGTGAGGTTCCTTA 58.964 50.000 0.00 0.00 32.46 2.69
114 115 1.838077 CGATTAGGGGTGAGGTTCCTT 59.162 52.381 0.00 0.00 32.46 3.36
115 116 1.497161 CGATTAGGGGTGAGGTTCCT 58.503 55.000 0.00 0.00 34.85 3.36
116 117 0.179054 GCGATTAGGGGTGAGGTTCC 60.179 60.000 0.00 0.00 0.00 3.62
117 118 0.179054 GGCGATTAGGGGTGAGGTTC 60.179 60.000 0.00 0.00 0.00 3.62
118 119 0.620700 AGGCGATTAGGGGTGAGGTT 60.621 55.000 0.00 0.00 0.00 3.50
119 120 1.003051 AGGCGATTAGGGGTGAGGT 59.997 57.895 0.00 0.00 0.00 3.85
120 121 1.749033 GAGGCGATTAGGGGTGAGG 59.251 63.158 0.00 0.00 0.00 3.86
121 122 1.749033 GGAGGCGATTAGGGGTGAG 59.251 63.158 0.00 0.00 0.00 3.51
122 123 2.131709 CGGAGGCGATTAGGGGTGA 61.132 63.158 0.00 0.00 0.00 4.02
123 124 2.421739 CGGAGGCGATTAGGGGTG 59.578 66.667 0.00 0.00 0.00 4.61
124 125 3.547513 GCGGAGGCGATTAGGGGT 61.548 66.667 0.00 0.00 0.00 4.95
125 126 2.602746 TTTGCGGAGGCGATTAGGGG 62.603 60.000 0.00 0.00 44.10 4.79
126 127 0.746563 TTTTGCGGAGGCGATTAGGG 60.747 55.000 0.00 0.00 44.10 3.53
127 128 0.657840 CTTTTGCGGAGGCGATTAGG 59.342 55.000 0.00 0.00 44.10 2.69
128 129 1.327764 GTCTTTTGCGGAGGCGATTAG 59.672 52.381 0.00 0.00 44.10 1.73
129 130 1.365699 GTCTTTTGCGGAGGCGATTA 58.634 50.000 0.00 0.00 44.10 1.75
130 131 1.635663 CGTCTTTTGCGGAGGCGATT 61.636 55.000 2.13 0.00 44.48 3.34
131 132 2.100631 CGTCTTTTGCGGAGGCGAT 61.101 57.895 2.13 0.00 44.48 4.58
132 133 2.736995 CGTCTTTTGCGGAGGCGA 60.737 61.111 2.13 0.00 44.48 5.54
139 140 0.237498 GTTTCCCTCCGTCTTTTGCG 59.763 55.000 0.00 0.00 0.00 4.85
140 141 0.237498 CGTTTCCCTCCGTCTTTTGC 59.763 55.000 0.00 0.00 0.00 3.68
141 142 0.237498 GCGTTTCCCTCCGTCTTTTG 59.763 55.000 0.00 0.00 0.00 2.44
142 143 0.108019 AGCGTTTCCCTCCGTCTTTT 59.892 50.000 0.00 0.00 0.00 2.27
143 144 0.602905 CAGCGTTTCCCTCCGTCTTT 60.603 55.000 0.00 0.00 0.00 2.52
144 145 1.004918 CAGCGTTTCCCTCCGTCTT 60.005 57.895 0.00 0.00 0.00 3.01
145 146 1.906824 TCAGCGTTTCCCTCCGTCT 60.907 57.895 0.00 0.00 0.00 4.18
146 147 1.737008 GTCAGCGTTTCCCTCCGTC 60.737 63.158 0.00 0.00 0.00 4.79
147 148 2.342648 GTCAGCGTTTCCCTCCGT 59.657 61.111 0.00 0.00 0.00 4.69
148 149 2.434359 GGTCAGCGTTTCCCTCCG 60.434 66.667 0.00 0.00 0.00 4.63
149 150 2.434359 CGGTCAGCGTTTCCCTCC 60.434 66.667 0.00 0.00 0.00 4.30
150 151 1.737008 GACGGTCAGCGTTTCCCTC 60.737 63.158 2.07 0.00 0.00 4.30
151 152 2.342648 GACGGTCAGCGTTTCCCT 59.657 61.111 2.07 0.00 0.00 4.20
152 153 2.029964 TGACGGTCAGCGTTTCCC 59.970 61.111 2.07 0.00 0.00 3.97
153 154 2.315386 GGTGACGGTCAGCGTTTCC 61.315 63.158 22.69 10.56 35.04 3.13
154 155 3.241177 GGTGACGGTCAGCGTTTC 58.759 61.111 22.69 5.20 35.04 2.78
159 160 3.036084 CGTGTGGTGACGGTCAGC 61.036 66.667 28.31 28.31 44.54 4.26
166 167 3.608662 TCCGTCCCGTGTGGTGAC 61.609 66.667 0.00 0.00 34.15 3.67
167 168 3.608662 GTCCGTCCCGTGTGGTGA 61.609 66.667 0.00 0.00 34.77 4.02
168 169 3.858868 CTGTCCGTCCCGTGTGGTG 62.859 68.421 0.00 0.00 34.77 4.17
169 170 3.612681 CTGTCCGTCCCGTGTGGT 61.613 66.667 0.00 0.00 34.77 4.16
170 171 4.373116 CCTGTCCGTCCCGTGTGG 62.373 72.222 0.00 0.00 0.00 4.17
171 172 2.372040 TTTCCTGTCCGTCCCGTGTG 62.372 60.000 0.00 0.00 0.00 3.82
172 173 1.477685 ATTTCCTGTCCGTCCCGTGT 61.478 55.000 0.00 0.00 0.00 4.49
173 174 0.533491 TATTTCCTGTCCGTCCCGTG 59.467 55.000 0.00 0.00 0.00 4.94
174 175 0.533951 GTATTTCCTGTCCGTCCCGT 59.466 55.000 0.00 0.00 0.00 5.28
175 176 0.822164 AGTATTTCCTGTCCGTCCCG 59.178 55.000 0.00 0.00 0.00 5.14
176 177 1.742750 GCAGTATTTCCTGTCCGTCCC 60.743 57.143 0.00 0.00 34.84 4.46
177 178 1.207329 AGCAGTATTTCCTGTCCGTCC 59.793 52.381 0.00 0.00 34.84 4.79
178 179 2.541556 GAGCAGTATTTCCTGTCCGTC 58.458 52.381 0.00 0.00 34.84 4.79
179 180 1.135083 CGAGCAGTATTTCCTGTCCGT 60.135 52.381 0.00 0.00 34.84 4.69
180 181 1.560923 CGAGCAGTATTTCCTGTCCG 58.439 55.000 0.00 0.00 34.84 4.79
181 182 1.134670 AGCGAGCAGTATTTCCTGTCC 60.135 52.381 0.00 0.00 34.84 4.02
182 183 1.929836 CAGCGAGCAGTATTTCCTGTC 59.070 52.381 0.00 0.00 34.84 3.51
183 184 1.276421 ACAGCGAGCAGTATTTCCTGT 59.724 47.619 0.00 0.00 34.84 4.00
184 185 1.929836 GACAGCGAGCAGTATTTCCTG 59.070 52.381 0.00 0.00 35.49 3.86
185 186 1.550524 TGACAGCGAGCAGTATTTCCT 59.449 47.619 0.00 0.00 0.00 3.36
186 187 1.661112 GTGACAGCGAGCAGTATTTCC 59.339 52.381 0.00 0.00 0.00 3.13
187 188 1.321743 CGTGACAGCGAGCAGTATTTC 59.678 52.381 0.00 0.00 0.00 2.17
188 189 1.350193 CGTGACAGCGAGCAGTATTT 58.650 50.000 0.00 0.00 0.00 1.40
189 190 0.458543 CCGTGACAGCGAGCAGTATT 60.459 55.000 0.00 0.00 0.00 1.89
190 191 1.139734 CCGTGACAGCGAGCAGTAT 59.860 57.895 0.00 0.00 0.00 2.12
191 192 2.566529 CCGTGACAGCGAGCAGTA 59.433 61.111 0.00 0.00 0.00 2.74
201 202 4.634703 AATGTGGCCGCCGTGACA 62.635 61.111 15.15 3.41 0.00 3.58
202 203 2.414840 AAAAATGTGGCCGCCGTGAC 62.415 55.000 15.15 0.00 0.00 3.67
203 204 2.196925 AAAAATGTGGCCGCCGTGA 61.197 52.632 15.15 0.00 0.00 4.35
204 205 2.021039 CAAAAATGTGGCCGCCGTG 61.021 57.895 15.15 0.53 0.00 4.94
213 214 5.910637 AATACAGTTGCAGCAAAAATGTG 57.089 34.783 22.96 13.44 0.00 3.21
276 283 1.743252 GGTCGCAGCTCCTTCTTGG 60.743 63.158 0.00 0.00 37.10 3.61
385 404 0.907704 ACGACTCCCACCAGCCAATA 60.908 55.000 0.00 0.00 0.00 1.90
408 427 0.602638 ACTCGCTGAACGGAATTGCA 60.603 50.000 0.00 0.00 43.89 4.08
626 1828 1.794864 CATCTCCGTCGTCTCACGT 59.205 57.895 0.00 0.00 43.14 4.49
636 1838 2.123251 AGATCCCCGCATCTCCGT 60.123 61.111 0.00 0.00 0.00 4.69
669 1871 0.741915 GATCTTCTTCCTCCTCGCGT 59.258 55.000 5.77 0.00 0.00 6.01
710 1919 1.658717 CTGGCCGTTCGATCTAGCG 60.659 63.158 0.00 0.00 0.00 4.26
806 2018 7.704472 TGACTTTTTGTGGTGTGATGTTATTTC 59.296 33.333 0.00 0.00 0.00 2.17
807 2019 7.551585 TGACTTTTTGTGGTGTGATGTTATTT 58.448 30.769 0.00 0.00 0.00 1.40
808 2020 7.106439 TGACTTTTTGTGGTGTGATGTTATT 57.894 32.000 0.00 0.00 0.00 1.40
809 2021 6.321181 ACTGACTTTTTGTGGTGTGATGTTAT 59.679 34.615 0.00 0.00 0.00 1.89
810 2022 5.650266 ACTGACTTTTTGTGGTGTGATGTTA 59.350 36.000 0.00 0.00 0.00 2.41
811 2023 4.462483 ACTGACTTTTTGTGGTGTGATGTT 59.538 37.500 0.00 0.00 0.00 2.71
812 2024 4.016444 ACTGACTTTTTGTGGTGTGATGT 58.984 39.130 0.00 0.00 0.00 3.06
813 2025 4.637483 ACTGACTTTTTGTGGTGTGATG 57.363 40.909 0.00 0.00 0.00 3.07
814 2026 4.462483 ACAACTGACTTTTTGTGGTGTGAT 59.538 37.500 0.00 0.00 34.61 3.06
815 2027 3.823873 ACAACTGACTTTTTGTGGTGTGA 59.176 39.130 0.00 0.00 34.61 3.58
816 2028 3.919804 CACAACTGACTTTTTGTGGTGTG 59.080 43.478 6.57 0.00 45.89 3.82
817 2029 4.173036 CACAACTGACTTTTTGTGGTGT 57.827 40.909 6.57 0.00 45.89 4.16
822 2034 1.469079 GGCGCACAACTGACTTTTTGT 60.469 47.619 10.83 0.00 36.35 2.83
823 2035 1.199624 GGCGCACAACTGACTTTTTG 58.800 50.000 10.83 0.00 0.00 2.44
824 2036 0.248458 CGGCGCACAACTGACTTTTT 60.248 50.000 10.83 0.00 0.00 1.94
825 2037 1.355210 CGGCGCACAACTGACTTTT 59.645 52.632 10.83 0.00 0.00 2.27
826 2038 2.542907 CCGGCGCACAACTGACTTT 61.543 57.895 10.83 0.00 0.00 2.66
827 2039 2.972505 CCGGCGCACAACTGACTT 60.973 61.111 10.83 0.00 0.00 3.01
839 2051 3.330853 GAGTAATCTGCGCCGGCG 61.331 66.667 43.13 43.13 44.10 6.46
840 2052 1.951631 GAGAGTAATCTGCGCCGGC 60.952 63.158 19.07 19.07 40.52 6.13
841 2053 1.300233 GGAGAGTAATCTGCGCCGG 60.300 63.158 4.18 0.00 0.00 6.13
842 2054 0.179111 TTGGAGAGTAATCTGCGCCG 60.179 55.000 4.18 0.00 0.00 6.46
843 2055 1.936547 CTTTGGAGAGTAATCTGCGCC 59.063 52.381 4.18 0.00 0.00 6.53
844 2056 2.893637 TCTTTGGAGAGTAATCTGCGC 58.106 47.619 7.21 0.00 0.00 6.09
845 2057 7.064609 TGTTATTTCTTTGGAGAGTAATCTGCG 59.935 37.037 7.21 0.00 32.44 5.18
846 2058 8.268850 TGTTATTTCTTTGGAGAGTAATCTGC 57.731 34.615 4.59 4.59 32.44 4.26
850 2062 9.739276 TGTGATGTTATTTCTTTGGAGAGTAAT 57.261 29.630 0.00 0.00 32.44 1.89
851 2063 8.999431 GTGTGATGTTATTTCTTTGGAGAGTAA 58.001 33.333 0.00 0.00 32.44 2.24
852 2064 7.606456 GGTGTGATGTTATTTCTTTGGAGAGTA 59.394 37.037 0.00 0.00 32.44 2.59
853 2065 6.431234 GGTGTGATGTTATTTCTTTGGAGAGT 59.569 38.462 0.00 0.00 32.44 3.24
854 2066 6.430925 TGGTGTGATGTTATTTCTTTGGAGAG 59.569 38.462 0.00 0.00 32.44 3.20
855 2067 6.206634 GTGGTGTGATGTTATTTCTTTGGAGA 59.793 38.462 0.00 0.00 0.00 3.71
856 2068 6.016360 TGTGGTGTGATGTTATTTCTTTGGAG 60.016 38.462 0.00 0.00 0.00 3.86
857 2069 5.830457 TGTGGTGTGATGTTATTTCTTTGGA 59.170 36.000 0.00 0.00 0.00 3.53
858 2070 6.083098 TGTGGTGTGATGTTATTTCTTTGG 57.917 37.500 0.00 0.00 0.00 3.28
859 2071 8.417780 TTTTGTGGTGTGATGTTATTTCTTTG 57.582 30.769 0.00 0.00 0.00 2.77
860 2072 9.097257 CTTTTTGTGGTGTGATGTTATTTCTTT 57.903 29.630 0.00 0.00 0.00 2.52
861 2073 8.257306 ACTTTTTGTGGTGTGATGTTATTTCTT 58.743 29.630 0.00 0.00 0.00 2.52
862 2074 7.781056 ACTTTTTGTGGTGTGATGTTATTTCT 58.219 30.769 0.00 0.00 0.00 2.52
863 2075 7.704472 TGACTTTTTGTGGTGTGATGTTATTTC 59.296 33.333 0.00 0.00 0.00 2.17
864 2076 7.551585 TGACTTTTTGTGGTGTGATGTTATTT 58.448 30.769 0.00 0.00 0.00 1.40
865 2077 7.106439 TGACTTTTTGTGGTGTGATGTTATT 57.894 32.000 0.00 0.00 0.00 1.40
866 2078 6.321181 ACTGACTTTTTGTGGTGTGATGTTAT 59.679 34.615 0.00 0.00 0.00 1.89
871 2083 4.704540 TGAACTGACTTTTTGTGGTGTGAT 59.295 37.500 0.00 0.00 0.00 3.06
928 2140 3.758715 GCCAGTGGCTTGTGTTTTT 57.241 47.368 27.48 0.00 46.69 1.94
1048 2260 3.329542 AAGATGATGCGGCGGTGGT 62.330 57.895 9.78 0.00 0.00 4.16
1102 2314 3.489513 GCCCTGGTAAGGCGGGAT 61.490 66.667 0.00 0.00 42.96 3.85
1284 2502 1.128692 GCGACTAAAATTCAGCACGCT 59.871 47.619 16.89 0.00 38.31 5.07
1336 2554 0.736053 GGAGATTCGACGAGCTGAGT 59.264 55.000 6.99 0.00 0.00 3.41
1373 2594 7.994425 TTACAAAGCATCTGAAATTCCAGTA 57.006 32.000 0.00 0.00 35.71 2.74
1420 2641 6.482308 TGTTTCTTGGCTAAACTACAGAAGAC 59.518 38.462 10.47 0.00 37.64 3.01
1787 3018 0.384353 GTTTTGCGAGCTCGGACAAC 60.384 55.000 33.38 33.38 41.50 3.32
1808 3039 5.374080 CGTATGCCAGCAAGTATTTTATCG 58.626 41.667 0.00 0.00 0.00 2.92
1844 3075 5.255710 ACATTCGACTCCTCATGTTAGAG 57.744 43.478 7.54 7.54 35.39 2.43
1896 3127 4.175787 AGGAAGGTTACGATCGCATATC 57.824 45.455 16.60 6.36 0.00 1.63
2058 3289 6.593978 CACTGAAGAGTGTTCGGAATAAAAG 58.406 40.000 15.37 0.00 44.15 2.27
2091 3324 6.041182 ACAACATAATCCGGCTGTATACTACA 59.959 38.462 4.17 0.00 37.13 2.74
2113 3346 3.011566 TGAGAAAAAGGGACAGCACAA 57.988 42.857 0.00 0.00 0.00 3.33
2119 3352 5.132144 AGGAAGTAGTTGAGAAAAAGGGACA 59.868 40.000 0.00 0.00 0.00 4.02
2267 3500 7.798596 AATAGAGAACATAATCAGCAACCTG 57.201 36.000 0.00 0.00 40.54 4.00
2285 3518 6.446781 AGTCATGAAATGCACCAAATAGAG 57.553 37.500 0.00 0.00 46.21 2.43
2294 3527 4.216257 ACCTACACAAGTCATGAAATGCAC 59.784 41.667 0.00 0.00 46.21 4.57
2569 3802 2.978156 AGGAACCAATGGCTTCTTCA 57.022 45.000 0.00 0.00 0.00 3.02
2630 3863 3.063510 TCTTTTGTGGCTCTCATCTGG 57.936 47.619 0.00 0.00 0.00 3.86
2996 4229 7.335627 CCTTTGTGACTCACCAATATAAGGTA 58.664 38.462 6.72 0.00 37.23 3.08
3173 4410 9.177608 AGAATAAGACAACTGCATAAATAAGCA 57.822 29.630 0.00 0.00 39.25 3.91
3207 4444 3.529634 TGTAAGCGACAAATTTGGACG 57.470 42.857 24.83 24.83 34.15 4.79
3245 4482 6.725364 TCATCCCTGAGCTTAGAAGAATTTT 58.275 36.000 7.16 0.00 0.00 1.82
3286 4523 8.081208 GGTAACTTCTGACTAGTAAACCAAAC 57.919 38.462 0.00 0.00 34.40 2.93
3601 4838 5.050363 CCATGTAAACTATATCACGTGGTGC 60.050 44.000 17.00 0.87 41.27 5.01
3648 4885 4.043435 AGTTTAAGGGCATGAGGTTTCTCT 59.957 41.667 0.00 0.00 40.58 3.10
3662 4899 6.537660 CCTATACCGAAGTTCAAGTTTAAGGG 59.462 42.308 3.32 0.00 0.00 3.95
3675 4915 7.469732 GCAGTAGTTCAATACCTATACCGAAGT 60.470 40.741 0.00 0.00 0.00 3.01
3849 5092 1.289160 TGGGCAGCTGGAGAAAGTAT 58.711 50.000 17.12 0.00 0.00 2.12
3999 5242 3.255149 GGCTAAGATCATTGCAATCAGGG 59.745 47.826 9.53 0.00 0.00 4.45
4183 5426 3.895998 AGAGATCAAGAAAAGGGATGCC 58.104 45.455 0.00 0.00 0.00 4.40
4186 5429 8.964772 CATGTTTAAGAGATCAAGAAAAGGGAT 58.035 33.333 0.00 0.00 0.00 3.85
4258 5501 6.339587 TCAAATAATCACAACAGGGGAAAC 57.660 37.500 0.00 0.00 0.00 2.78
4458 5701 1.028868 ATTGGGCAGCTTCGCTTCTC 61.029 55.000 1.65 0.00 36.40 2.87
4647 5890 1.980232 CAAGCATGCAAGAGGCCCA 60.980 57.895 21.98 0.00 43.89 5.36
4710 5953 1.068585 GGGTGAACGACGGACTTGT 59.931 57.895 0.00 0.00 0.00 3.16
4773 6017 9.228077 AGTAAGAAGAAGATAGTACCCTCTAGA 57.772 37.037 0.00 0.00 0.00 2.43
4940 6184 0.460987 CACCTGTCATTCGCCTCCTC 60.461 60.000 0.00 0.00 0.00 3.71
4996 6241 4.223032 CAGCCCTAGAAGTTAAAGGACAGA 59.777 45.833 4.82 0.00 31.64 3.41
5034 6279 5.562506 TGTAGCAGTATGTGAGTACACTC 57.437 43.478 2.29 2.29 46.07 3.51
5074 6319 6.338937 ACGACAATAGGGTCTATTTCAACTC 58.661 40.000 0.00 0.00 35.63 3.01
5096 6341 8.404765 AGCATCATATCTAGTTATCTCATGACG 58.595 37.037 0.00 0.00 0.00 4.35
5217 6462 9.548208 GCATAAAACAAAGTAAGAGACAATCTC 57.452 33.333 0.00 0.00 43.70 2.75
5341 6586 2.558359 CCCTTTTTCCAGTGCTTAGGTG 59.442 50.000 0.00 0.00 0.00 4.00
5700 6946 0.376852 TGAAAGCGTGTTGTGCAGTC 59.623 50.000 0.00 0.00 33.85 3.51
5791 7037 6.217294 GGCTCATCTTAATATAGGTATCGGC 58.783 44.000 0.00 0.00 0.00 5.54
5883 7129 2.083774 GCTACCTGCATTGCTGTTGTA 58.916 47.619 10.49 7.21 42.31 2.41
6103 7349 4.264253 TCAGTCTCCCAAATTACATGCAG 58.736 43.478 0.00 0.00 0.00 4.41
6247 7493 8.254508 AGACTAGATATCTTGGTGAAGTTCAAC 58.745 37.037 14.26 14.26 33.88 3.18
6250 7496 7.147811 ACCAGACTAGATATCTTGGTGAAGTTC 60.148 40.741 21.07 7.89 30.91 3.01
6306 7552 9.249053 AGCTATATACTAGTTGCAGTATCACAT 57.751 33.333 0.00 0.00 40.20 3.21
6355 7601 9.326413 GCTATACTAAAGAATTAAGAAGCACCA 57.674 33.333 0.00 0.00 0.00 4.17
6366 7613 4.657039 TGGGACCGGCTATACTAAAGAATT 59.343 41.667 0.00 0.00 0.00 2.17
6388 7635 1.077716 CCTCCTTTACCCGGGCTTG 60.078 63.158 24.08 8.51 0.00 4.01
6392 7639 2.070650 CCCTCCTCCTTTACCCGGG 61.071 68.421 22.25 22.25 0.00 5.73
6393 7640 0.912968 AACCCTCCTCCTTTACCCGG 60.913 60.000 0.00 0.00 0.00 5.73
6397 7644 4.141688 CCTATCACAACCCTCCTCCTTTAC 60.142 50.000 0.00 0.00 0.00 2.01
6398 7645 4.037927 CCTATCACAACCCTCCTCCTTTA 58.962 47.826 0.00 0.00 0.00 1.85
6399 7646 2.846827 CCTATCACAACCCTCCTCCTTT 59.153 50.000 0.00 0.00 0.00 3.11
6400 7647 2.482494 CCTATCACAACCCTCCTCCTT 58.518 52.381 0.00 0.00 0.00 3.36
6402 7649 0.470341 GCCTATCACAACCCTCCTCC 59.530 60.000 0.00 0.00 0.00 4.30
6403 7650 1.139853 CTGCCTATCACAACCCTCCTC 59.860 57.143 0.00 0.00 0.00 3.71
6404 7651 1.207791 CTGCCTATCACAACCCTCCT 58.792 55.000 0.00 0.00 0.00 3.69
6406 7653 0.811616 CGCTGCCTATCACAACCCTC 60.812 60.000 0.00 0.00 0.00 4.30
6407 7654 1.221840 CGCTGCCTATCACAACCCT 59.778 57.895 0.00 0.00 0.00 4.34
6409 7656 1.432270 GCTCGCTGCCTATCACAACC 61.432 60.000 0.00 0.00 35.15 3.77
6410 7657 2.009888 GCTCGCTGCCTATCACAAC 58.990 57.895 0.00 0.00 35.15 3.32
6411 7658 4.521075 GCTCGCTGCCTATCACAA 57.479 55.556 0.00 0.00 35.15 3.33
6421 7668 1.263217 AGTTTTTACGTTGGCTCGCTG 59.737 47.619 0.00 0.00 0.00 5.18
6423 7670 1.262151 TGAGTTTTTACGTTGGCTCGC 59.738 47.619 0.00 0.00 0.00 5.03
6425 7672 2.350484 GGCTGAGTTTTTACGTTGGCTC 60.350 50.000 0.00 0.00 0.00 4.70
6428 7675 2.616842 AGTGGCTGAGTTTTTACGTTGG 59.383 45.455 0.00 0.00 0.00 3.77
6430 7677 3.805207 AGAGTGGCTGAGTTTTTACGTT 58.195 40.909 0.00 0.00 0.00 3.99
6431 7678 3.470645 AGAGTGGCTGAGTTTTTACGT 57.529 42.857 0.00 0.00 0.00 3.57
6432 7679 5.163854 CCATAAGAGTGGCTGAGTTTTTACG 60.164 44.000 0.00 0.00 31.43 3.18
6433 7680 5.938125 TCCATAAGAGTGGCTGAGTTTTTAC 59.062 40.000 0.00 0.00 39.19 2.01
6435 7682 4.985538 TCCATAAGAGTGGCTGAGTTTTT 58.014 39.130 0.00 0.00 39.19 1.94
6436 7683 4.287067 TCTCCATAAGAGTGGCTGAGTTTT 59.713 41.667 0.00 0.00 43.71 2.43
6438 7685 3.445008 TCTCCATAAGAGTGGCTGAGTT 58.555 45.455 0.00 0.00 43.71 3.01
6439 7686 3.107402 TCTCCATAAGAGTGGCTGAGT 57.893 47.619 0.00 0.00 43.71 3.41
6440 7687 3.640498 TCATCTCCATAAGAGTGGCTGAG 59.360 47.826 0.00 0.00 43.71 3.35
6441 7688 3.646534 TCATCTCCATAAGAGTGGCTGA 58.353 45.455 0.00 0.00 43.71 4.26
6442 7689 4.412796 TTCATCTCCATAAGAGTGGCTG 57.587 45.455 0.00 0.00 43.71 4.85
6445 7692 4.080356 TGGGTTTCATCTCCATAAGAGTGG 60.080 45.833 0.00 0.00 43.71 4.00
6446 7693 5.102953 TGGGTTTCATCTCCATAAGAGTG 57.897 43.478 0.00 0.00 43.71 3.51
6449 7696 6.789268 TCTTTTGGGTTTCATCTCCATAAGA 58.211 36.000 9.33 9.33 42.22 2.10
6450 7697 7.651027 ATCTTTTGGGTTTCATCTCCATAAG 57.349 36.000 0.00 0.00 39.39 1.73
6452 7699 8.434589 AAAATCTTTTGGGTTTCATCTCCATA 57.565 30.769 0.00 0.00 0.00 2.74
6455 7702 5.863935 CGAAAATCTTTTGGGTTTCATCTCC 59.136 40.000 0.00 0.00 31.66 3.71
6456 7703 6.447162 ACGAAAATCTTTTGGGTTTCATCTC 58.553 36.000 0.00 0.00 31.27 2.75
6457 7704 6.405278 ACGAAAATCTTTTGGGTTTCATCT 57.595 33.333 0.00 0.00 31.27 2.90
6458 7705 6.073819 CCAACGAAAATCTTTTGGGTTTCATC 60.074 38.462 0.00 0.00 35.76 2.92
6460 7707 5.112686 CCAACGAAAATCTTTTGGGTTTCA 58.887 37.500 0.00 0.00 35.76 2.69
6466 7713 2.224161 TGCCCCAACGAAAATCTTTTGG 60.224 45.455 0.00 0.00 38.62 3.28
6467 7714 3.104843 TGCCCCAACGAAAATCTTTTG 57.895 42.857 0.00 0.00 0.00 2.44
6470 7717 3.194755 GGTTATGCCCCAACGAAAATCTT 59.805 43.478 0.00 0.00 0.00 2.40
6471 7718 2.758423 GGTTATGCCCCAACGAAAATCT 59.242 45.455 0.00 0.00 0.00 2.40
6472 7719 3.159353 GGTTATGCCCCAACGAAAATC 57.841 47.619 0.00 0.00 0.00 2.17
6484 7731 1.383523 GTTGCTGAGAGGGTTATGCC 58.616 55.000 0.00 0.00 0.00 4.40
6486 7733 1.009829 GCGTTGCTGAGAGGGTTATG 58.990 55.000 0.00 0.00 0.00 1.90
6488 7735 1.080093 CGCGTTGCTGAGAGGGTTA 60.080 57.895 0.00 0.00 0.00 2.85
6489 7736 2.357517 CGCGTTGCTGAGAGGGTT 60.358 61.111 0.00 0.00 0.00 4.11
6493 7740 3.782244 GTGGCGCGTTGCTGAGAG 61.782 66.667 8.43 0.00 45.43 3.20
6494 7741 3.881952 ATGTGGCGCGTTGCTGAGA 62.882 57.895 8.43 0.00 45.43 3.27
6495 7742 3.372676 GATGTGGCGCGTTGCTGAG 62.373 63.158 8.43 0.00 45.43 3.35
6496 7743 3.422303 GATGTGGCGCGTTGCTGA 61.422 61.111 8.43 0.00 45.43 4.26
6497 7744 4.799473 CGATGTGGCGCGTTGCTG 62.799 66.667 8.43 0.00 45.43 4.41
6499 7746 4.794241 GTCGATGTGGCGCGTTGC 62.794 66.667 8.43 0.00 45.38 4.17
6507 7754 3.702048 ACACCCGGGTCGATGTGG 61.702 66.667 27.51 13.88 35.14 4.17
6508 7755 2.434185 CACACCCGGGTCGATGTG 60.434 66.667 27.51 24.80 36.78 3.21
6509 7756 3.702048 CCACACCCGGGTCGATGT 61.702 66.667 27.51 16.90 0.00 3.06
6510 7757 3.702048 ACCACACCCGGGTCGATG 61.702 66.667 27.51 21.86 31.49 3.84
6511 7758 3.702048 CACCACACCCGGGTCGAT 61.702 66.667 27.51 9.88 36.19 3.59
6516 7763 4.904590 TTTGCCACCACACCCGGG 62.905 66.667 22.25 22.25 0.00 5.73
6517 7764 2.600173 ATTTGCCACCACACCCGG 60.600 61.111 0.00 0.00 0.00 5.73
6518 7765 2.650196 CATTTGCCACCACACCCG 59.350 61.111 0.00 0.00 0.00 5.28
6519 7766 2.582493 CCCATTTGCCACCACACCC 61.582 63.158 0.00 0.00 0.00 4.61
6520 7767 3.059099 CCCATTTGCCACCACACC 58.941 61.111 0.00 0.00 0.00 4.16
6521 7768 2.037620 TTGCCCATTTGCCACCACAC 62.038 55.000 0.00 0.00 0.00 3.82
6522 7769 1.756408 CTTGCCCATTTGCCACCACA 61.756 55.000 0.00 0.00 0.00 4.17
6523 7770 1.004679 CTTGCCCATTTGCCACCAC 60.005 57.895 0.00 0.00 0.00 4.16
6524 7771 2.215625 CCTTGCCCATTTGCCACCA 61.216 57.895 0.00 0.00 0.00 4.17
6525 7772 2.664398 CCTTGCCCATTTGCCACC 59.336 61.111 0.00 0.00 0.00 4.61
6526 7773 2.664398 CCCTTGCCCATTTGCCAC 59.336 61.111 0.00 0.00 0.00 5.01
6527 7774 3.320830 GCCCTTGCCCATTTGCCA 61.321 61.111 0.00 0.00 0.00 4.92
6563 7810 3.151673 GAAAGATACGGCGCGCCAC 62.152 63.158 45.26 31.72 35.37 5.01
6564 7811 2.888534 GAAAGATACGGCGCGCCA 60.889 61.111 45.26 30.75 35.37 5.69
6565 7812 3.637030 GGAAAGATACGGCGCGCC 61.637 66.667 39.82 39.82 0.00 6.53
6566 7813 3.984765 CGGAAAGATACGGCGCGC 61.985 66.667 25.94 25.94 0.00 6.86
6567 7814 3.327754 CCGGAAAGATACGGCGCG 61.328 66.667 6.90 0.00 43.96 6.86
6582 7829 4.155733 TGGCAGCCACCGTATCCG 62.156 66.667 11.22 0.00 0.00 4.18
6583 7830 2.203070 CTGGCAGCCACCGTATCC 60.203 66.667 11.22 0.00 0.00 2.59
6584 7831 1.227380 CTCTGGCAGCCACCGTATC 60.227 63.158 11.22 0.00 0.00 2.24
6585 7832 2.903357 CTCTGGCAGCCACCGTAT 59.097 61.111 11.22 0.00 0.00 3.06
6586 7833 4.082523 GCTCTGGCAGCCACCGTA 62.083 66.667 11.22 0.00 43.17 4.02
6594 7841 1.030488 CCAACTCATGGCTCTGGCAG 61.030 60.000 8.58 8.58 43.80 4.85
6595 7842 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
6596 7843 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
6604 7851 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
6605 7852 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
6606 7853 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
6607 7854 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
6608 7855 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
6609 7856 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
6610 7857 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
6611 7858 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
6612 7859 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
6613 7860 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
6614 7861 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
6615 7862 3.531538 GTGAAACCCATAAGATCTCGCA 58.468 45.455 0.00 0.00 0.00 5.10
6630 7877 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
6631 7878 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
6632 7879 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
6633 7880 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
6634 7881 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
6635 7882 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
6636 7883 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
6637 7884 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
6638 7885 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
6639 7886 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
6640 7887 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
6641 7888 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
6650 7897 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
6651 7898 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
6652 7899 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
6653 7900 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
6654 7901 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
6655 7902 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
6656 7903 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
6657 7904 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
6658 7905 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
6659 7906 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
6660 7907 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
6661 7908 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
6662 7909 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
6663 7910 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
6664 7911 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
6665 7912 5.406780 CACAACAACAACAACAAAGCCTTTA 59.593 36.000 0.00 0.00 0.00 1.85
6666 7913 4.213059 CACAACAACAACAACAAAGCCTTT 59.787 37.500 0.00 0.00 0.00 3.11
6667 7914 3.745458 CACAACAACAACAACAAAGCCTT 59.255 39.130 0.00 0.00 0.00 4.35
6668 7915 3.006323 TCACAACAACAACAACAAAGCCT 59.994 39.130 0.00 0.00 0.00 4.58
6669 7916 3.122780 GTCACAACAACAACAACAAAGCC 59.877 43.478 0.00 0.00 0.00 4.35
6670 7917 3.987220 AGTCACAACAACAACAACAAAGC 59.013 39.130 0.00 0.00 0.00 3.51
6671 7918 4.385447 CCAGTCACAACAACAACAACAAAG 59.615 41.667 0.00 0.00 0.00 2.77
6672 7919 4.202161 ACCAGTCACAACAACAACAACAAA 60.202 37.500 0.00 0.00 0.00 2.83
6673 7920 3.319405 ACCAGTCACAACAACAACAACAA 59.681 39.130 0.00 0.00 0.00 2.83
6674 7921 2.887783 ACCAGTCACAACAACAACAACA 59.112 40.909 0.00 0.00 0.00 3.33
6675 7922 3.241701 CACCAGTCACAACAACAACAAC 58.758 45.455 0.00 0.00 0.00 3.32
6676 7923 2.230025 CCACCAGTCACAACAACAACAA 59.770 45.455 0.00 0.00 0.00 2.83
6677 7924 1.815613 CCACCAGTCACAACAACAACA 59.184 47.619 0.00 0.00 0.00 3.33
6678 7925 1.134175 CCCACCAGTCACAACAACAAC 59.866 52.381 0.00 0.00 0.00 3.32
6679 7926 1.004862 TCCCACCAGTCACAACAACAA 59.995 47.619 0.00 0.00 0.00 2.83
6684 7931 1.906574 TCCTATCCCACCAGTCACAAC 59.093 52.381 0.00 0.00 0.00 3.32
6741 7995 9.542462 CGTGATATATAAACATATACTTGGGGG 57.458 37.037 0.00 0.00 0.00 5.40
6780 8034 4.815533 AGCTCAGCAACTCAGATAGAAA 57.184 40.909 0.00 0.00 0.00 2.52
6829 8088 9.927081 AATGTCAGATCAAATTTAGTAGGGAAT 57.073 29.630 0.00 0.00 0.00 3.01
6871 8130 6.338146 AGAAACATGCCATCAAATTCATGAG 58.662 36.000 8.95 0.00 38.77 2.90
6997 8256 6.153510 ACAGAGCAGTGAATGAAGTGATACTA 59.846 38.462 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.