Multiple sequence alignment - TraesCS2A01G093500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G093500 chr2A 100.000 3227 0 0 1 3227 47797031 47793805 0.000000e+00 5960
1 TraesCS2A01G093500 chr2A 86.819 1965 192 30 568 2496 47829673 47827740 0.000000e+00 2132
2 TraesCS2A01G093500 chr2A 85.270 1446 179 10 1043 2473 47779819 47778393 0.000000e+00 1459
3 TraesCS2A01G093500 chr2A 85.106 1316 151 24 854 2137 47761399 47762701 0.000000e+00 1303
4 TraesCS2A01G093500 chr2A 81.241 1354 210 26 865 2200 47706213 47707540 0.000000e+00 1053
5 TraesCS2A01G093500 chr2A 86.377 345 42 5 865 1206 47825386 47825044 3.930000e-99 372
6 TraesCS2A01G093500 chr2A 78.544 261 21 16 501 745 47780065 47779824 4.340000e-29 139
7 TraesCS2A01G093500 chr2B 83.091 2265 289 46 714 2936 69003509 69005721 0.000000e+00 1975
8 TraesCS2A01G093500 chr2B 88.889 1503 147 10 891 2377 69036107 69034609 0.000000e+00 1832
9 TraesCS2A01G093500 chr2B 82.830 1689 212 36 961 2608 68580088 68578437 0.000000e+00 1441
10 TraesCS2A01G093500 chr2B 81.399 1801 227 54 865 2608 68818721 68820470 0.000000e+00 1371
11 TraesCS2A01G093500 chr2D 83.365 2110 265 35 565 2632 43988616 43986551 0.000000e+00 1873
12 TraesCS2A01G093500 chr2D 82.526 1156 162 23 1050 2188 43974757 43975889 0.000000e+00 979
13 TraesCS2A01G093500 chr5B 79.130 1356 231 33 905 2251 479816043 479817355 0.000000e+00 889
14 TraesCS2A01G093500 chr5B 81.585 429 58 14 88 508 528991800 528991385 5.160000e-88 335
15 TraesCS2A01G093500 chr5A 80.747 696 108 13 905 1596 505489388 505490061 1.330000e-143 520
16 TraesCS2A01G093500 chr5D 83.262 466 72 3 1035 1497 399928140 399928602 1.070000e-114 424
17 TraesCS2A01G093500 chr1A 85.042 361 43 9 150 505 419484469 419484115 1.100000e-94 357
18 TraesCS2A01G093500 chr7D 82.692 416 47 16 98 504 28339543 28339144 2.380000e-91 346
19 TraesCS2A01G093500 chr3B 81.752 411 59 13 97 498 201043253 201043656 2.400000e-86 329
20 TraesCS2A01G093500 chr1B 83.102 361 44 10 150 505 437549810 437550158 2.420000e-81 313
21 TraesCS2A01G093500 chr1D 82.730 359 42 12 150 501 324743318 324743663 5.230000e-78 302
22 TraesCS2A01G093500 chr3D 81.963 377 45 13 139 501 448532346 448532713 6.770000e-77 298
23 TraesCS2A01G093500 chr3A 80.000 370 53 19 96 458 569270015 569270370 1.490000e-63 254
24 TraesCS2A01G093500 chr6D 81.311 305 49 8 97 396 53172905 53173206 1.160000e-59 241


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G093500 chr2A 47793805 47797031 3226 True 5960 5960 100.000 1 3227 1 chr2A.!!$R1 3226
1 TraesCS2A01G093500 chr2A 47761399 47762701 1302 False 1303 1303 85.106 854 2137 1 chr2A.!!$F2 1283
2 TraesCS2A01G093500 chr2A 47825044 47829673 4629 True 1252 2132 86.598 568 2496 2 chr2A.!!$R3 1928
3 TraesCS2A01G093500 chr2A 47706213 47707540 1327 False 1053 1053 81.241 865 2200 1 chr2A.!!$F1 1335
4 TraesCS2A01G093500 chr2A 47778393 47780065 1672 True 799 1459 81.907 501 2473 2 chr2A.!!$R2 1972
5 TraesCS2A01G093500 chr2B 69003509 69005721 2212 False 1975 1975 83.091 714 2936 1 chr2B.!!$F2 2222
6 TraesCS2A01G093500 chr2B 69034609 69036107 1498 True 1832 1832 88.889 891 2377 1 chr2B.!!$R2 1486
7 TraesCS2A01G093500 chr2B 68578437 68580088 1651 True 1441 1441 82.830 961 2608 1 chr2B.!!$R1 1647
8 TraesCS2A01G093500 chr2B 68818721 68820470 1749 False 1371 1371 81.399 865 2608 1 chr2B.!!$F1 1743
9 TraesCS2A01G093500 chr2D 43986551 43988616 2065 True 1873 1873 83.365 565 2632 1 chr2D.!!$R1 2067
10 TraesCS2A01G093500 chr2D 43974757 43975889 1132 False 979 979 82.526 1050 2188 1 chr2D.!!$F1 1138
11 TraesCS2A01G093500 chr5B 479816043 479817355 1312 False 889 889 79.130 905 2251 1 chr5B.!!$F1 1346
12 TraesCS2A01G093500 chr5A 505489388 505490061 673 False 520 520 80.747 905 1596 1 chr5A.!!$F1 691

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
32 33 0.175989 GGTGGAGAGGTGAACGATCC 59.824 60.0 0.0 0.0 0.00 3.36 F
45 46 0.178068 ACGATCCACCCCTCAAATCG 59.822 55.0 0.0 0.0 43.53 3.34 F
1499 1655 0.106868 TGGATCTCTAGGCCGACGAA 60.107 55.0 0.0 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1283 1435 0.520827 CTCGAGTTCACCGTAGTCGC 60.521 60.0 3.62 0.0 38.12 5.19 R
1619 1775 0.673644 GCGTAAAGCCAGCTCCAAGA 60.674 55.0 0.00 0.0 40.81 3.02 R
2939 3155 0.104409 AAGAGGGACCAGGAACCAGT 60.104 55.0 0.00 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.893637 CAATAGGTGGAGAGGTGAACG 58.106 52.381 0.00 0.00 0.00 3.95
29 30 2.496070 CAATAGGTGGAGAGGTGAACGA 59.504 50.000 0.00 0.00 0.00 3.85
30 31 2.526888 TAGGTGGAGAGGTGAACGAT 57.473 50.000 0.00 0.00 0.00 3.73
31 32 1.187087 AGGTGGAGAGGTGAACGATC 58.813 55.000 0.00 0.00 0.00 3.69
32 33 0.175989 GGTGGAGAGGTGAACGATCC 59.824 60.000 0.00 0.00 0.00 3.36
33 34 0.895530 GTGGAGAGGTGAACGATCCA 59.104 55.000 0.00 0.00 36.58 3.41
34 35 0.895530 TGGAGAGGTGAACGATCCAC 59.104 55.000 0.00 0.00 34.80 4.02
38 39 3.400188 GGTGAACGATCCACCCCT 58.600 61.111 8.09 0.00 46.30 4.79
39 40 1.221021 GGTGAACGATCCACCCCTC 59.779 63.158 8.09 0.00 46.30 4.30
40 41 1.550130 GGTGAACGATCCACCCCTCA 61.550 60.000 8.09 0.00 46.30 3.86
41 42 0.323629 GTGAACGATCCACCCCTCAA 59.676 55.000 0.00 0.00 0.00 3.02
42 43 1.060729 TGAACGATCCACCCCTCAAA 58.939 50.000 0.00 0.00 0.00 2.69
43 44 1.633432 TGAACGATCCACCCCTCAAAT 59.367 47.619 0.00 0.00 0.00 2.32
44 45 2.289565 GAACGATCCACCCCTCAAATC 58.710 52.381 0.00 0.00 0.00 2.17
45 46 0.178068 ACGATCCACCCCTCAAATCG 59.822 55.000 0.00 0.00 43.53 3.34
46 47 0.532862 CGATCCACCCCTCAAATCGG 60.533 60.000 0.00 0.00 36.48 4.18
47 48 0.179018 GATCCACCCCTCAAATCGGG 60.179 60.000 0.00 0.00 45.70 5.14
54 55 2.215942 CCCTCAAATCGGGGTTTTCT 57.784 50.000 0.00 0.00 38.08 2.52
55 56 2.525368 CCCTCAAATCGGGGTTTTCTT 58.475 47.619 0.00 0.00 38.08 2.52
56 57 3.692690 CCCTCAAATCGGGGTTTTCTTA 58.307 45.455 0.00 0.00 38.08 2.10
57 58 3.442625 CCCTCAAATCGGGGTTTTCTTAC 59.557 47.826 0.00 0.00 38.08 2.34
58 59 4.076394 CCTCAAATCGGGGTTTTCTTACA 58.924 43.478 0.00 0.00 0.00 2.41
59 60 4.082949 CCTCAAATCGGGGTTTTCTTACAC 60.083 45.833 0.00 0.00 0.00 2.90
60 61 4.462133 TCAAATCGGGGTTTTCTTACACA 58.538 39.130 0.00 0.00 0.00 3.72
61 62 4.888239 TCAAATCGGGGTTTTCTTACACAA 59.112 37.500 0.00 0.00 0.00 3.33
62 63 5.536916 TCAAATCGGGGTTTTCTTACACAAT 59.463 36.000 0.00 0.00 0.00 2.71
63 64 5.385509 AATCGGGGTTTTCTTACACAATG 57.614 39.130 0.00 0.00 0.00 2.82
64 65 2.554893 TCGGGGTTTTCTTACACAATGC 59.445 45.455 0.00 0.00 0.00 3.56
65 66 2.352323 CGGGGTTTTCTTACACAATGCC 60.352 50.000 0.00 0.00 0.00 4.40
66 67 2.352323 GGGGTTTTCTTACACAATGCCG 60.352 50.000 0.00 0.00 0.00 5.69
67 68 2.295070 GGGTTTTCTTACACAATGCCGT 59.705 45.455 0.00 0.00 0.00 5.68
68 69 3.305110 GGTTTTCTTACACAATGCCGTG 58.695 45.455 0.00 0.00 42.81 4.94
69 70 2.697431 TTTCTTACACAATGCCGTGC 57.303 45.000 0.00 0.00 40.73 5.34
70 71 1.598882 TTCTTACACAATGCCGTGCA 58.401 45.000 1.01 1.01 44.86 4.57
81 82 1.732941 TGCCGTGCATTAGGTACTTG 58.267 50.000 0.00 0.00 34.32 3.16
82 83 1.002659 TGCCGTGCATTAGGTACTTGT 59.997 47.619 0.00 0.00 34.32 3.16
83 84 2.234168 TGCCGTGCATTAGGTACTTGTA 59.766 45.455 0.00 0.00 34.32 2.41
84 85 2.864343 GCCGTGCATTAGGTACTTGTAG 59.136 50.000 0.00 0.00 41.75 2.74
85 86 2.864343 CCGTGCATTAGGTACTTGTAGC 59.136 50.000 0.00 2.14 41.75 3.58
86 87 3.430374 CCGTGCATTAGGTACTTGTAGCT 60.430 47.826 15.38 15.38 41.75 3.32
87 88 3.551890 CGTGCATTAGGTACTTGTAGCTG 59.448 47.826 19.04 7.71 41.75 4.24
88 89 3.309954 GTGCATTAGGTACTTGTAGCTGC 59.690 47.826 19.04 15.54 41.75 5.25
89 90 3.055458 TGCATTAGGTACTTGTAGCTGCA 60.055 43.478 19.04 17.41 41.75 4.41
90 91 4.130118 GCATTAGGTACTTGTAGCTGCAT 58.870 43.478 19.04 10.29 41.75 3.96
91 92 4.576463 GCATTAGGTACTTGTAGCTGCATT 59.424 41.667 19.04 0.00 41.75 3.56
92 93 5.758296 GCATTAGGTACTTGTAGCTGCATTA 59.242 40.000 19.04 0.00 41.75 1.90
93 94 6.428159 GCATTAGGTACTTGTAGCTGCATTAT 59.572 38.462 19.04 0.00 41.75 1.28
94 95 7.041098 GCATTAGGTACTTGTAGCTGCATTATT 60.041 37.037 19.04 0.00 41.75 1.40
95 96 8.840321 CATTAGGTACTTGTAGCTGCATTATTT 58.160 33.333 19.04 0.00 41.75 1.40
96 97 6.683974 AGGTACTTGTAGCTGCATTATTTG 57.316 37.500 4.98 0.00 27.25 2.32
97 98 5.590259 AGGTACTTGTAGCTGCATTATTTGG 59.410 40.000 4.98 0.00 27.25 3.28
98 99 4.989279 ACTTGTAGCTGCATTATTTGGG 57.011 40.909 4.98 0.00 0.00 4.12
99 100 4.599041 ACTTGTAGCTGCATTATTTGGGA 58.401 39.130 4.98 0.00 0.00 4.37
100 101 4.399303 ACTTGTAGCTGCATTATTTGGGAC 59.601 41.667 4.98 0.00 0.00 4.46
101 102 2.942376 TGTAGCTGCATTATTTGGGACG 59.058 45.455 0.00 0.00 0.00 4.79
102 103 2.128771 AGCTGCATTATTTGGGACGT 57.871 45.000 1.02 0.00 0.00 4.34
103 104 1.745087 AGCTGCATTATTTGGGACGTG 59.255 47.619 1.02 0.00 0.00 4.49
104 105 1.742831 GCTGCATTATTTGGGACGTGA 59.257 47.619 0.00 0.00 0.00 4.35
105 106 2.163412 GCTGCATTATTTGGGACGTGAA 59.837 45.455 0.00 0.00 0.00 3.18
106 107 3.731867 GCTGCATTATTTGGGACGTGAAG 60.732 47.826 0.00 0.00 0.00 3.02
107 108 3.417101 TGCATTATTTGGGACGTGAAGT 58.583 40.909 0.00 0.00 0.00 3.01
108 109 3.823873 TGCATTATTTGGGACGTGAAGTT 59.176 39.130 0.00 0.00 0.00 2.66
109 110 4.279671 TGCATTATTTGGGACGTGAAGTTT 59.720 37.500 0.00 0.00 0.00 2.66
110 111 5.221342 TGCATTATTTGGGACGTGAAGTTTT 60.221 36.000 0.00 0.00 0.00 2.43
111 112 5.694458 GCATTATTTGGGACGTGAAGTTTTT 59.306 36.000 0.00 0.00 0.00 1.94
112 113 6.346518 GCATTATTTGGGACGTGAAGTTTTTG 60.347 38.462 0.00 0.00 0.00 2.44
113 114 4.729227 ATTTGGGACGTGAAGTTTTTGT 57.271 36.364 0.00 0.00 0.00 2.83
114 115 3.495670 TTGGGACGTGAAGTTTTTGTG 57.504 42.857 0.00 0.00 0.00 3.33
115 116 1.133407 TGGGACGTGAAGTTTTTGTGC 59.867 47.619 0.00 0.00 0.00 4.57
116 117 1.535226 GGGACGTGAAGTTTTTGTGCC 60.535 52.381 0.00 0.00 33.88 5.01
117 118 1.404035 GGACGTGAAGTTTTTGTGCCT 59.596 47.619 0.00 0.00 0.00 4.75
118 119 2.450160 GACGTGAAGTTTTTGTGCCTG 58.550 47.619 0.00 0.00 0.00 4.85
119 120 2.088423 ACGTGAAGTTTTTGTGCCTGA 58.912 42.857 0.00 0.00 0.00 3.86
120 121 2.097466 ACGTGAAGTTTTTGTGCCTGAG 59.903 45.455 0.00 0.00 0.00 3.35
121 122 2.463876 GTGAAGTTTTTGTGCCTGAGC 58.536 47.619 0.00 0.00 40.48 4.26
122 123 2.099756 GTGAAGTTTTTGTGCCTGAGCT 59.900 45.455 0.00 0.00 40.80 4.09
123 124 2.358898 TGAAGTTTTTGTGCCTGAGCTC 59.641 45.455 6.82 6.82 40.80 4.09
124 125 2.057137 AGTTTTTGTGCCTGAGCTCA 57.943 45.000 17.19 17.19 40.58 4.26
125 126 2.590821 AGTTTTTGTGCCTGAGCTCAT 58.409 42.857 18.63 0.00 41.79 2.90
126 127 2.961062 AGTTTTTGTGCCTGAGCTCATT 59.039 40.909 18.63 0.00 41.79 2.57
127 128 3.385755 AGTTTTTGTGCCTGAGCTCATTT 59.614 39.130 18.63 0.00 41.79 2.32
128 129 3.374220 TTTTGTGCCTGAGCTCATTTG 57.626 42.857 18.63 10.14 41.79 2.32
129 130 2.275134 TTGTGCCTGAGCTCATTTGA 57.725 45.000 18.63 0.00 41.79 2.69
130 131 1.817357 TGTGCCTGAGCTCATTTGAG 58.183 50.000 18.63 4.77 44.75 3.02
143 144 4.521146 CTCATTTGAGCTGGGTGAATAGT 58.479 43.478 0.00 0.00 35.13 2.12
144 145 5.674525 CTCATTTGAGCTGGGTGAATAGTA 58.325 41.667 0.00 0.00 35.13 1.82
145 146 6.061022 TCATTTGAGCTGGGTGAATAGTAA 57.939 37.500 0.00 0.00 0.00 2.24
146 147 6.480763 TCATTTGAGCTGGGTGAATAGTAAA 58.519 36.000 0.00 0.00 0.00 2.01
147 148 6.945435 TCATTTGAGCTGGGTGAATAGTAAAA 59.055 34.615 0.00 0.00 0.00 1.52
148 149 7.615365 TCATTTGAGCTGGGTGAATAGTAAAAT 59.385 33.333 0.00 0.00 0.00 1.82
149 150 7.391148 TTTGAGCTGGGTGAATAGTAAAATC 57.609 36.000 0.00 0.00 0.00 2.17
150 151 5.116180 TGAGCTGGGTGAATAGTAAAATCG 58.884 41.667 0.00 0.00 0.00 3.34
151 152 5.105106 TGAGCTGGGTGAATAGTAAAATCGA 60.105 40.000 0.00 0.00 0.00 3.59
152 153 5.741011 AGCTGGGTGAATAGTAAAATCGAA 58.259 37.500 0.00 0.00 0.00 3.71
153 154 6.177610 AGCTGGGTGAATAGTAAAATCGAAA 58.822 36.000 0.00 0.00 0.00 3.46
154 155 6.657541 AGCTGGGTGAATAGTAAAATCGAAAA 59.342 34.615 0.00 0.00 0.00 2.29
155 156 7.175990 AGCTGGGTGAATAGTAAAATCGAAAAA 59.824 33.333 0.00 0.00 0.00 1.94
156 157 7.272731 GCTGGGTGAATAGTAAAATCGAAAAAC 59.727 37.037 0.00 0.00 0.00 2.43
157 158 8.167605 TGGGTGAATAGTAAAATCGAAAAACA 57.832 30.769 0.00 0.00 0.00 2.83
158 159 8.798402 TGGGTGAATAGTAAAATCGAAAAACAT 58.202 29.630 0.00 0.00 0.00 2.71
159 160 9.634163 GGGTGAATAGTAAAATCGAAAAACATT 57.366 29.630 0.00 0.00 0.00 2.71
204 205 3.594603 TTTTTCCGGCAAACTTTGACA 57.405 38.095 8.12 0.00 39.16 3.58
205 206 3.594603 TTTTCCGGCAAACTTTGACAA 57.405 38.095 8.12 0.00 39.16 3.18
206 207 3.594603 TTTCCGGCAAACTTTGACAAA 57.405 38.095 8.12 0.00 39.16 2.83
207 208 3.810310 TTCCGGCAAACTTTGACAAAT 57.190 38.095 8.12 0.00 39.16 2.32
208 209 4.920640 TTCCGGCAAACTTTGACAAATA 57.079 36.364 8.12 0.00 39.16 1.40
209 210 5.461032 TTCCGGCAAACTTTGACAAATAT 57.539 34.783 8.12 0.00 39.16 1.28
210 211 5.461032 TCCGGCAAACTTTGACAAATATT 57.539 34.783 8.12 0.00 39.16 1.28
211 212 5.465935 TCCGGCAAACTTTGACAAATATTC 58.534 37.500 8.12 0.00 39.16 1.75
212 213 5.242838 TCCGGCAAACTTTGACAAATATTCT 59.757 36.000 8.12 0.00 39.16 2.40
213 214 6.431543 TCCGGCAAACTTTGACAAATATTCTA 59.568 34.615 8.12 0.00 39.16 2.10
214 215 7.040340 TCCGGCAAACTTTGACAAATATTCTAA 60.040 33.333 8.12 0.00 39.16 2.10
215 216 7.273381 CCGGCAAACTTTGACAAATATTCTAAG 59.727 37.037 8.12 0.00 39.16 2.18
216 217 8.020819 CGGCAAACTTTGACAAATATTCTAAGA 58.979 33.333 8.12 0.00 39.16 2.10
217 218 9.346725 GGCAAACTTTGACAAATATTCTAAGAG 57.653 33.333 5.65 0.00 38.99 2.85
218 219 9.346725 GCAAACTTTGACAAATATTCTAAGAGG 57.653 33.333 5.65 0.00 32.29 3.69
222 223 8.515414 ACTTTGACAAATATTCTAAGAGGTTGC 58.485 33.333 0.05 0.00 32.29 4.17
223 224 7.994425 TTGACAAATATTCTAAGAGGTTGCA 57.006 32.000 0.00 0.00 0.00 4.08
224 225 7.377766 TGACAAATATTCTAAGAGGTTGCAC 57.622 36.000 0.00 0.00 0.00 4.57
225 226 6.939730 TGACAAATATTCTAAGAGGTTGCACA 59.060 34.615 0.00 0.00 0.00 4.57
226 227 7.446931 TGACAAATATTCTAAGAGGTTGCACAA 59.553 33.333 0.00 0.00 0.00 3.33
227 228 8.353423 ACAAATATTCTAAGAGGTTGCACAAT 57.647 30.769 0.00 0.00 0.00 2.71
228 229 8.806146 ACAAATATTCTAAGAGGTTGCACAATT 58.194 29.630 0.00 0.00 0.00 2.32
229 230 9.643693 CAAATATTCTAAGAGGTTGCACAATTT 57.356 29.630 0.00 0.00 0.00 1.82
230 231 9.860898 AAATATTCTAAGAGGTTGCACAATTTC 57.139 29.630 0.00 0.00 0.00 2.17
231 232 6.899393 ATTCTAAGAGGTTGCACAATTTCA 57.101 33.333 0.00 0.00 0.00 2.69
232 233 6.899393 TTCTAAGAGGTTGCACAATTTCAT 57.101 33.333 0.00 0.00 0.00 2.57
233 234 6.899393 TCTAAGAGGTTGCACAATTTCATT 57.101 33.333 0.00 0.00 0.00 2.57
234 235 6.680810 TCTAAGAGGTTGCACAATTTCATTG 58.319 36.000 0.00 0.00 45.59 2.82
235 236 3.656559 AGAGGTTGCACAATTTCATTGC 58.343 40.909 0.00 0.00 43.98 3.56
236 237 2.406130 AGGTTGCACAATTTCATTGCG 58.594 42.857 0.00 0.00 43.98 4.85
237 238 2.035704 AGGTTGCACAATTTCATTGCGA 59.964 40.909 0.00 0.00 43.98 5.10
238 239 2.799412 GGTTGCACAATTTCATTGCGAA 59.201 40.909 0.00 0.00 43.98 4.70
252 253 8.754230 TTTCATTGCGAAATCACATTTATGAA 57.246 26.923 0.00 0.00 38.72 2.57
253 254 8.754230 TTCATTGCGAAATCACATTTATGAAA 57.246 26.923 0.00 0.00 33.76 2.69
254 255 8.397215 TCATTGCGAAATCACATTTATGAAAG 57.603 30.769 0.00 0.00 31.47 2.62
255 256 8.028354 TCATTGCGAAATCACATTTATGAAAGT 58.972 29.630 0.00 0.00 31.47 2.66
256 257 7.795431 TTGCGAAATCACATTTATGAAAGTC 57.205 32.000 0.00 0.00 31.47 3.01
257 258 6.020984 TGCGAAATCACATTTATGAAAGTCG 58.979 36.000 0.00 0.00 35.22 4.18
258 259 5.452302 GCGAAATCACATTTATGAAAGTCGG 59.548 40.000 0.00 0.00 33.89 4.79
259 260 5.965334 CGAAATCACATTTATGAAAGTCGGG 59.035 40.000 0.00 0.00 31.65 5.14
260 261 4.900635 ATCACATTTATGAAAGTCGGGC 57.099 40.909 0.00 0.00 30.82 6.13
261 262 3.680490 TCACATTTATGAAAGTCGGGCA 58.320 40.909 0.00 0.00 0.00 5.36
262 263 4.075682 TCACATTTATGAAAGTCGGGCAA 58.924 39.130 0.00 0.00 0.00 4.52
263 264 4.520874 TCACATTTATGAAAGTCGGGCAAA 59.479 37.500 0.00 0.00 0.00 3.68
264 265 5.010112 TCACATTTATGAAAGTCGGGCAAAA 59.990 36.000 0.00 0.00 0.00 2.44
265 266 5.694006 CACATTTATGAAAGTCGGGCAAAAA 59.306 36.000 0.00 0.00 0.00 1.94
292 293 9.768662 AAACAAAATCAATACTCTGAAAATGCT 57.231 25.926 0.00 0.00 0.00 3.79
294 295 9.846248 ACAAAATCAATACTCTGAAAATGCTAC 57.154 29.630 0.00 0.00 0.00 3.58
300 301 9.283768 TCAATACTCTGAAAATGCTACTTTTGA 57.716 29.630 0.00 0.00 0.00 2.69
301 302 9.897744 CAATACTCTGAAAATGCTACTTTTGAA 57.102 29.630 0.00 0.00 0.00 2.69
304 305 6.920210 ACTCTGAAAATGCTACTTTTGAAAGC 59.080 34.615 3.48 0.00 39.63 3.51
313 314 7.928908 TGCTACTTTTGAAAGCATTTTGTAG 57.071 32.000 3.48 0.00 39.27 2.74
314 315 6.420604 TGCTACTTTTGAAAGCATTTTGTAGC 59.579 34.615 12.53 12.53 39.27 3.58
315 316 6.420604 GCTACTTTTGAAAGCATTTTGTAGCA 59.579 34.615 13.99 0.00 39.27 3.49
316 317 6.588348 ACTTTTGAAAGCATTTTGTAGCAC 57.412 33.333 3.48 0.00 39.27 4.40
317 318 6.340522 ACTTTTGAAAGCATTTTGTAGCACT 58.659 32.000 3.48 0.00 39.27 4.40
318 319 6.256321 ACTTTTGAAAGCATTTTGTAGCACTG 59.744 34.615 3.48 0.00 39.27 3.66
319 320 5.512753 TTGAAAGCATTTTGTAGCACTGA 57.487 34.783 0.00 0.00 39.27 3.41
320 321 5.710513 TGAAAGCATTTTGTAGCACTGAT 57.289 34.783 0.00 0.00 39.27 2.90
321 322 6.088016 TGAAAGCATTTTGTAGCACTGATT 57.912 33.333 0.00 0.00 39.27 2.57
322 323 6.514947 TGAAAGCATTTTGTAGCACTGATTT 58.485 32.000 0.00 0.00 39.27 2.17
323 324 6.985645 TGAAAGCATTTTGTAGCACTGATTTT 59.014 30.769 0.00 0.00 39.27 1.82
324 325 6.774354 AAGCATTTTGTAGCACTGATTTTG 57.226 33.333 0.00 0.00 0.00 2.44
325 326 5.846203 AGCATTTTGTAGCACTGATTTTGT 58.154 33.333 0.00 0.00 0.00 2.83
326 327 6.282930 AGCATTTTGTAGCACTGATTTTGTT 58.717 32.000 0.00 0.00 0.00 2.83
327 328 6.762661 AGCATTTTGTAGCACTGATTTTGTTT 59.237 30.769 0.00 0.00 0.00 2.83
328 329 7.280652 AGCATTTTGTAGCACTGATTTTGTTTT 59.719 29.630 0.00 0.00 0.00 2.43
329 330 7.909641 GCATTTTGTAGCACTGATTTTGTTTTT 59.090 29.630 0.00 0.00 0.00 1.94
349 350 3.577649 TTTTTGCCACGACTTTCACAA 57.422 38.095 0.00 0.00 0.00 3.33
350 351 3.577649 TTTTGCCACGACTTTCACAAA 57.422 38.095 0.00 0.00 0.00 2.83
351 352 3.791973 TTTGCCACGACTTTCACAAAT 57.208 38.095 0.00 0.00 0.00 2.32
352 353 2.772568 TGCCACGACTTTCACAAATG 57.227 45.000 0.00 0.00 0.00 2.32
353 354 2.020720 TGCCACGACTTTCACAAATGT 58.979 42.857 0.00 0.00 0.00 2.71
354 355 2.223456 TGCCACGACTTTCACAAATGTG 60.223 45.455 7.22 7.22 46.91 3.21
379 380 6.900568 TTTCGTGATGAAAATTTGCAAACT 57.099 29.167 15.41 0.00 43.46 2.66
380 381 6.900568 TTCGTGATGAAAATTTGCAAACTT 57.099 29.167 15.41 7.12 32.37 2.66
381 382 6.900568 TCGTGATGAAAATTTGCAAACTTT 57.099 29.167 17.71 17.71 0.00 2.66
382 383 7.301068 TCGTGATGAAAATTTGCAAACTTTT 57.699 28.000 18.58 20.41 0.00 2.27
383 384 7.746929 TCGTGATGAAAATTTGCAAACTTTTT 58.253 26.923 18.58 18.64 0.00 1.94
384 385 7.691463 TCGTGATGAAAATTTGCAAACTTTTTG 59.309 29.630 22.01 10.81 0.00 2.44
385 386 7.691463 CGTGATGAAAATTTGCAAACTTTTTGA 59.309 29.630 22.01 16.57 0.00 2.69
386 387 9.339492 GTGATGAAAATTTGCAAACTTTTTGAA 57.661 25.926 22.01 13.42 0.00 2.69
387 388 9.339492 TGATGAAAATTTGCAAACTTTTTGAAC 57.661 25.926 22.01 15.32 0.00 3.18
388 389 9.339492 GATGAAAATTTGCAAACTTTTTGAACA 57.661 25.926 22.01 14.59 0.00 3.18
389 390 9.857957 ATGAAAATTTGCAAACTTTTTGAACAT 57.142 22.222 22.01 15.85 0.00 2.71
390 391 9.688592 TGAAAATTTGCAAACTTTTTGAACATT 57.311 22.222 22.01 4.72 0.00 2.71
393 394 9.473640 AAATTTGCAAACTTTTTGAACATTTGT 57.526 22.222 15.41 0.00 33.70 2.83
394 395 8.672214 ATTTGCAAACTTTTTGAACATTTGTC 57.328 26.923 15.41 0.00 33.70 3.18
395 396 6.791887 TGCAAACTTTTTGAACATTTGTCA 57.208 29.167 2.80 0.00 33.70 3.58
396 397 7.194607 TGCAAACTTTTTGAACATTTGTCAA 57.805 28.000 2.80 0.00 33.70 3.18
397 398 7.642669 TGCAAACTTTTTGAACATTTGTCAAA 58.357 26.923 0.00 0.00 33.70 2.69
398 399 7.802251 TGCAAACTTTTTGAACATTTGTCAAAG 59.198 29.630 4.03 0.00 35.23 2.77
399 400 7.802720 GCAAACTTTTTGAACATTTGTCAAAGT 59.197 29.630 4.03 0.09 35.23 2.66
400 401 9.662545 CAAACTTTTTGAACATTTGTCAAAGTT 57.337 25.926 4.03 8.17 35.23 2.66
402 403 9.662545 AACTTTTTGAACATTTGTCAAAGTTTG 57.337 25.926 9.44 9.44 35.23 2.93
403 404 7.802720 ACTTTTTGAACATTTGTCAAAGTTTGC 59.197 29.630 10.90 6.87 35.23 3.68
404 405 5.793026 TTGAACATTTGTCAAAGTTTGCC 57.207 34.783 10.90 0.00 0.00 4.52
405 406 4.825422 TGAACATTTGTCAAAGTTTGCCA 58.175 34.783 10.90 2.56 0.00 4.92
406 407 5.240891 TGAACATTTGTCAAAGTTTGCCAA 58.759 33.333 7.94 7.94 0.00 4.52
407 408 5.879223 TGAACATTTGTCAAAGTTTGCCAAT 59.121 32.000 12.43 7.84 27.77 3.16
408 409 7.044181 TGAACATTTGTCAAAGTTTGCCAATA 58.956 30.769 12.43 5.15 27.77 1.90
409 410 7.550551 TGAACATTTGTCAAAGTTTGCCAATAA 59.449 29.630 12.43 0.01 27.77 1.40
410 411 7.856145 ACATTTGTCAAAGTTTGCCAATAAA 57.144 28.000 12.43 6.54 27.77 1.40
411 412 8.273780 ACATTTGTCAAAGTTTGCCAATAAAA 57.726 26.923 12.43 0.00 27.77 1.52
412 413 8.734386 ACATTTGTCAAAGTTTGCCAATAAAAA 58.266 25.926 12.43 3.04 27.77 1.94
463 464 6.569179 TGCTTTTAAGTTACTGTTCATCCC 57.431 37.500 0.00 0.00 0.00 3.85
464 465 5.180492 TGCTTTTAAGTTACTGTTCATCCCG 59.820 40.000 0.00 0.00 0.00 5.14
465 466 5.410439 GCTTTTAAGTTACTGTTCATCCCGA 59.590 40.000 0.00 0.00 0.00 5.14
466 467 6.072893 GCTTTTAAGTTACTGTTCATCCCGAA 60.073 38.462 0.00 0.00 0.00 4.30
477 478 2.632377 TCATCCCGAACTCATTTGAGC 58.368 47.619 7.48 0.00 45.79 4.26
478 479 2.237143 TCATCCCGAACTCATTTGAGCT 59.763 45.455 7.48 0.00 45.79 4.09
479 480 2.386661 TCCCGAACTCATTTGAGCTC 57.613 50.000 6.82 6.82 45.79 4.09
480 481 1.623311 TCCCGAACTCATTTGAGCTCA 59.377 47.619 13.74 13.74 45.79 4.26
481 482 2.005451 CCCGAACTCATTTGAGCTCAG 58.995 52.381 17.43 7.46 45.79 3.35
482 483 2.005451 CCGAACTCATTTGAGCTCAGG 58.995 52.381 17.43 10.84 45.79 3.86
483 484 2.613977 CCGAACTCATTTGAGCTCAGGT 60.614 50.000 17.43 2.90 45.79 4.00
484 485 2.414481 CGAACTCATTTGAGCTCAGGTG 59.586 50.000 17.43 18.40 45.79 4.00
485 486 3.406764 GAACTCATTTGAGCTCAGGTGT 58.593 45.455 17.43 13.82 45.79 4.16
486 487 4.569943 GAACTCATTTGAGCTCAGGTGTA 58.430 43.478 17.43 0.00 45.79 2.90
487 488 4.199432 ACTCATTTGAGCTCAGGTGTAG 57.801 45.455 17.43 17.66 45.79 2.74
488 489 3.834813 ACTCATTTGAGCTCAGGTGTAGA 59.165 43.478 17.43 9.37 45.79 2.59
489 490 4.284490 ACTCATTTGAGCTCAGGTGTAGAA 59.716 41.667 17.43 6.87 45.79 2.10
490 491 4.825422 TCATTTGAGCTCAGGTGTAGAAG 58.175 43.478 17.43 1.69 0.00 2.85
491 492 3.685139 TTTGAGCTCAGGTGTAGAAGG 57.315 47.619 17.43 0.00 0.00 3.46
492 493 1.561643 TGAGCTCAGGTGTAGAAGGG 58.438 55.000 13.74 0.00 0.00 3.95
493 494 1.203187 TGAGCTCAGGTGTAGAAGGGT 60.203 52.381 13.74 0.00 0.00 4.34
494 495 2.042569 TGAGCTCAGGTGTAGAAGGGTA 59.957 50.000 13.74 0.00 0.00 3.69
495 496 2.427812 GAGCTCAGGTGTAGAAGGGTAC 59.572 54.545 9.40 0.00 0.00 3.34
496 497 2.043252 AGCTCAGGTGTAGAAGGGTACT 59.957 50.000 0.00 0.00 0.00 2.73
497 498 2.832733 GCTCAGGTGTAGAAGGGTACTT 59.167 50.000 0.00 0.00 40.34 2.24
498 499 3.261137 GCTCAGGTGTAGAAGGGTACTTT 59.739 47.826 0.00 0.00 36.97 2.66
499 500 4.621038 GCTCAGGTGTAGAAGGGTACTTTC 60.621 50.000 0.00 0.00 36.97 2.62
551 566 6.024552 TCATTATTCAGTGTGAAAAAGGGC 57.975 37.500 0.00 0.00 40.12 5.19
552 567 4.864704 TTATTCAGTGTGAAAAAGGGCC 57.135 40.909 0.00 0.00 40.12 5.80
557 572 0.310854 GTGTGAAAAAGGGCCAGACG 59.689 55.000 6.18 0.00 0.00 4.18
558 573 0.821711 TGTGAAAAAGGGCCAGACGG 60.822 55.000 6.18 0.00 0.00 4.79
559 574 1.228429 TGAAAAAGGGCCAGACGGG 60.228 57.895 6.18 0.00 40.85 5.28
561 576 0.538746 GAAAAAGGGCCAGACGGGAA 60.539 55.000 6.18 0.00 40.01 3.97
564 579 2.002018 AAAGGGCCAGACGGGAACAA 62.002 55.000 6.18 0.00 40.01 2.83
565 580 2.671963 GGGCCAGACGGGAACAAC 60.672 66.667 4.39 0.00 40.01 3.32
577 594 0.949397 GGAACAACCGAACAAGGGAC 59.051 55.000 0.00 0.00 35.02 4.46
623 643 5.325239 CCCCCTCAAATTCCTAACATATCC 58.675 45.833 0.00 0.00 0.00 2.59
624 644 5.325239 CCCCTCAAATTCCTAACATATCCC 58.675 45.833 0.00 0.00 0.00 3.85
625 645 5.003804 CCCTCAAATTCCTAACATATCCCG 58.996 45.833 0.00 0.00 0.00 5.14
626 646 4.455877 CCTCAAATTCCTAACATATCCCGC 59.544 45.833 0.00 0.00 0.00 6.13
627 647 5.304686 TCAAATTCCTAACATATCCCGCT 57.695 39.130 0.00 0.00 0.00 5.52
628 648 5.063204 TCAAATTCCTAACATATCCCGCTG 58.937 41.667 0.00 0.00 0.00 5.18
629 649 3.703001 ATTCCTAACATATCCCGCTGG 57.297 47.619 0.00 0.00 0.00 4.85
631 651 2.684943 TCCTAACATATCCCGCTGGAA 58.315 47.619 0.00 0.00 45.98 3.53
632 652 2.367567 TCCTAACATATCCCGCTGGAAC 59.632 50.000 0.00 0.00 45.98 3.62
633 653 2.104111 CCTAACATATCCCGCTGGAACA 59.896 50.000 0.00 0.00 45.98 3.18
634 654 2.038387 AACATATCCCGCTGGAACAC 57.962 50.000 0.00 0.00 45.98 3.32
635 655 0.180406 ACATATCCCGCTGGAACACC 59.820 55.000 0.00 0.00 45.98 4.16
636 656 0.880278 CATATCCCGCTGGAACACCG 60.880 60.000 0.00 0.00 45.98 4.94
637 657 1.335132 ATATCCCGCTGGAACACCGT 61.335 55.000 0.00 0.00 45.98 4.83
638 658 2.233605 TATCCCGCTGGAACACCGTG 62.234 60.000 0.00 0.00 45.98 4.94
639 659 4.308458 CCCGCTGGAACACCGTGA 62.308 66.667 5.28 0.00 35.38 4.35
651 694 2.258591 CCGTGATATCTCGCCGGG 59.741 66.667 19.18 4.60 35.81 5.73
687 730 1.082117 CGCCGGTAAACAGATTCGCT 61.082 55.000 1.90 0.00 0.00 4.93
727 770 2.959071 GATCTCGGAGCACGCTGC 60.959 66.667 0.00 0.00 45.46 5.25
750 793 2.177173 GCCGCGTTCTGATTCATTTTC 58.823 47.619 4.92 0.00 0.00 2.29
769 813 6.828502 TTTTCGTCTCCATCTATCGATTTG 57.171 37.500 1.71 0.00 0.00 2.32
770 814 5.515797 TTCGTCTCCATCTATCGATTTGT 57.484 39.130 1.71 0.00 0.00 2.83
771 815 5.515797 TCGTCTCCATCTATCGATTTGTT 57.484 39.130 1.71 0.00 0.00 2.83
772 816 5.902681 TCGTCTCCATCTATCGATTTGTTT 58.097 37.500 1.71 0.00 0.00 2.83
795 839 4.714632 TCCCTCAAATCGTTCTTGTCTTT 58.285 39.130 0.00 0.00 0.00 2.52
796 840 4.515191 TCCCTCAAATCGTTCTTGTCTTTG 59.485 41.667 0.00 0.00 0.00 2.77
800 844 6.189677 TCAAATCGTTCTTGTCTTTGTGTT 57.810 33.333 0.00 0.00 0.00 3.32
810 854 2.159099 TGTCTTTGTGTTCAGAGTCGCT 60.159 45.455 0.00 0.00 0.00 4.93
812 856 1.528586 CTTTGTGTTCAGAGTCGCTGG 59.471 52.381 3.58 0.00 44.98 4.85
813 857 0.750249 TTGTGTTCAGAGTCGCTGGA 59.250 50.000 3.58 0.00 44.98 3.86
815 859 1.138069 TGTGTTCAGAGTCGCTGGAAA 59.862 47.619 3.58 0.00 44.98 3.13
816 860 2.224281 TGTGTTCAGAGTCGCTGGAAAT 60.224 45.455 3.58 0.00 44.98 2.17
817 861 2.413453 GTGTTCAGAGTCGCTGGAAATC 59.587 50.000 3.58 0.00 44.98 2.17
818 862 2.037121 TGTTCAGAGTCGCTGGAAATCA 59.963 45.455 3.58 0.00 44.98 2.57
848 899 2.361610 CAGGGGGTTCGCAATGCT 60.362 61.111 2.94 0.00 0.00 3.79
899 984 3.254892 CAAGTAAACCTTCTCGCCTCTC 58.745 50.000 0.00 0.00 0.00 3.20
959 1069 7.806487 CGTTTCCCCTTTTTATTCTTACAGTTC 59.194 37.037 0.00 0.00 0.00 3.01
1158 1284 1.202758 ACCGACAAGTTCATGCTGGAA 60.203 47.619 0.00 0.00 0.00 3.53
1179 1313 4.974721 CACCGCCACCAGCCCTTT 62.975 66.667 0.00 0.00 38.78 3.11
1206 1340 2.202362 CTCAGCCACGTCGTCGAG 60.202 66.667 9.47 0.03 40.62 4.04
1208 1348 4.406173 CAGCCACGTCGTCGAGCT 62.406 66.667 9.47 13.09 45.17 4.09
1212 1352 3.461982 CACGTCGTCGAGCTGCAC 61.462 66.667 9.47 0.00 40.62 4.57
1233 1379 1.318576 AAACCTGCCTCCTGTTTTCG 58.681 50.000 0.00 0.00 0.00 3.46
1499 1655 0.106868 TGGATCTCTAGGCCGACGAA 60.107 55.000 0.00 0.00 0.00 3.85
1500 1656 1.030457 GGATCTCTAGGCCGACGAAA 58.970 55.000 0.00 0.00 0.00 3.46
1501 1657 1.407979 GGATCTCTAGGCCGACGAAAA 59.592 52.381 0.00 0.00 0.00 2.29
1510 1666 3.195661 AGGCCGACGAAAATCTACAATC 58.804 45.455 0.00 0.00 0.00 2.67
1616 1772 0.948623 CAACCAACATCCTCGTCGCA 60.949 55.000 0.00 0.00 0.00 5.10
1619 1775 1.086696 CCAACATCCTCGTCGCATTT 58.913 50.000 0.00 0.00 0.00 2.32
1795 1951 1.982395 TCTCGTCCTGCCCGATTGT 60.982 57.895 0.00 0.00 33.27 2.71
1906 2065 4.344102 GGGTGTTACAGGACTATGATGCTA 59.656 45.833 0.00 0.00 0.00 3.49
1970 2129 0.027194 CCATCAGCGCTTGTTGATCG 59.973 55.000 7.50 0.00 41.02 3.69
1985 2150 5.836347 TGTTGATCGAGAGGTGATAATGAG 58.164 41.667 0.00 0.00 0.00 2.90
2023 2188 1.303888 AATGAGGGTGTGCTGCTGG 60.304 57.895 0.00 0.00 0.00 4.85
2061 2232 3.304257 GCGTGTGTTGCATTTTGACATA 58.696 40.909 0.00 0.00 0.00 2.29
2106 2277 4.699257 GTGAAGAGCAAAGATGACCAAGAT 59.301 41.667 0.00 0.00 0.00 2.40
2192 2363 7.231115 CCATGAGATGAGAGAAGAAGATAGTGA 59.769 40.741 0.00 0.00 0.00 3.41
2243 2420 4.701765 CTGTAGGATGCAGTGCTTAATCT 58.298 43.478 17.60 10.63 44.30 2.40
2244 2421 4.697514 TGTAGGATGCAGTGCTTAATCTC 58.302 43.478 17.60 5.65 0.00 2.75
2270 2447 2.930950 TCTACACTGCTGGTTTGCTTT 58.069 42.857 0.00 0.00 0.00 3.51
2280 2457 1.202627 TGGTTTGCTTTGCCAATGGAC 60.203 47.619 2.05 0.00 0.00 4.02
2281 2458 1.511850 GTTTGCTTTGCCAATGGACC 58.488 50.000 2.05 0.00 0.00 4.46
2291 2468 3.824133 TGCCAATGGACCATCTATTCTG 58.176 45.455 7.63 0.78 0.00 3.02
2325 2509 7.696992 TGTCTTTTGTTCTTAGTTGGTCTTT 57.303 32.000 0.00 0.00 0.00 2.52
2351 2535 3.059325 GTGCTGCTTGTAGAACTGAACAG 60.059 47.826 0.00 0.00 0.00 3.16
2415 2613 6.036470 GCCTTTAGCATCATGTTTAAGTTCC 58.964 40.000 0.40 0.00 42.97 3.62
2416 2614 6.350110 GCCTTTAGCATCATGTTTAAGTTCCA 60.350 38.462 0.40 0.00 42.97 3.53
2448 2646 9.588096 TGGAGAATCTTTGCTATATGACTAGTA 57.412 33.333 0.00 0.00 33.73 1.82
2573 2781 6.754209 GGAATGACACTACAGAATCAGTACAG 59.246 42.308 0.00 0.00 0.00 2.74
2637 2845 2.289382 TGGTACACATGTCATCGTGCTT 60.289 45.455 0.00 1.79 36.57 3.91
2678 2894 6.898041 TGAGTGAATAATTTTGGTTGAGTCG 58.102 36.000 0.00 0.00 0.00 4.18
2682 2898 7.012894 AGTGAATAATTTTGGTTGAGTCGTTGA 59.987 33.333 0.00 0.00 0.00 3.18
2693 2909 5.697633 GGTTGAGTCGTTGAAATGGTTAGTA 59.302 40.000 0.00 0.00 0.00 1.82
2711 2927 6.292150 GTTAGTATGGATCCTTCCTTCCAAG 58.708 44.000 14.23 0.00 44.83 3.61
2716 2932 4.918588 TGGATCCTTCCTTCCAAGTTTAC 58.081 43.478 14.23 0.00 43.07 2.01
2730 2946 7.979444 TCCAAGTTTACTAGTTTGATCCTTG 57.021 36.000 0.00 5.70 0.00 3.61
2782 2998 0.674895 ATGGTTGCTCGTGCTCCTTC 60.675 55.000 18.92 4.67 40.48 3.46
2788 3004 1.668294 CTCGTGCTCCTTCTGTGGT 59.332 57.895 0.00 0.00 0.00 4.16
2789 3005 0.888619 CTCGTGCTCCTTCTGTGGTA 59.111 55.000 0.00 0.00 0.00 3.25
2793 3009 1.740025 GTGCTCCTTCTGTGGTAATGC 59.260 52.381 0.00 0.00 0.00 3.56
2797 3013 4.261801 GCTCCTTCTGTGGTAATGCTTTA 58.738 43.478 0.00 0.00 0.00 1.85
2798 3014 4.884164 GCTCCTTCTGTGGTAATGCTTTAT 59.116 41.667 0.00 0.00 0.00 1.40
2806 3022 4.769488 TGTGGTAATGCTTTATTCAGGCAA 59.231 37.500 0.00 0.00 39.46 4.52
2870 3086 7.674471 TTGTGTCCATCGATATTTTTGTACA 57.326 32.000 0.00 0.00 0.00 2.90
2910 3126 8.245195 TCTTAGCAAGTAATTTTGGTTCCTTT 57.755 30.769 0.28 0.00 39.33 3.11
2936 3152 7.436080 TGCTTTGACATGTTTTGAGAAAGAATC 59.564 33.333 0.00 0.00 33.01 2.52
2937 3153 7.357859 GCTTTGACATGTTTTGAGAAAGAATCG 60.358 37.037 0.00 0.00 33.01 3.34
2938 3154 6.618287 TGACATGTTTTGAGAAAGAATCGT 57.382 33.333 0.00 0.00 0.00 3.73
2939 3155 7.722795 TGACATGTTTTGAGAAAGAATCGTA 57.277 32.000 0.00 0.00 0.00 3.43
2940 3156 7.572759 TGACATGTTTTGAGAAAGAATCGTAC 58.427 34.615 0.00 0.00 0.00 3.67
2941 3157 7.441157 TGACATGTTTTGAGAAAGAATCGTACT 59.559 33.333 0.00 0.00 0.00 2.73
2942 3158 7.576236 ACATGTTTTGAGAAAGAATCGTACTG 58.424 34.615 0.00 0.00 0.00 2.74
2943 3159 6.539649 TGTTTTGAGAAAGAATCGTACTGG 57.460 37.500 0.00 0.00 0.00 4.00
2945 3161 6.540914 TGTTTTGAGAAAGAATCGTACTGGTT 59.459 34.615 0.00 0.00 0.00 3.67
2946 3162 6.780706 TTTGAGAAAGAATCGTACTGGTTC 57.219 37.500 3.46 3.46 0.00 3.62
2947 3163 4.817517 TGAGAAAGAATCGTACTGGTTCC 58.182 43.478 6.97 0.00 0.00 3.62
2949 3165 4.822026 AGAAAGAATCGTACTGGTTCCTG 58.178 43.478 6.97 0.00 0.00 3.86
2952 3168 2.496470 AGAATCGTACTGGTTCCTGGTC 59.504 50.000 6.97 0.00 0.00 4.02
2953 3169 1.192428 ATCGTACTGGTTCCTGGTCC 58.808 55.000 0.00 0.00 0.00 4.46
2954 3170 0.901580 TCGTACTGGTTCCTGGTCCC 60.902 60.000 0.00 0.00 0.00 4.46
2956 3172 0.903236 GTACTGGTTCCTGGTCCCTC 59.097 60.000 0.00 0.00 0.00 4.30
2957 3173 0.790993 TACTGGTTCCTGGTCCCTCT 59.209 55.000 0.00 0.00 0.00 3.69
2958 3174 0.104409 ACTGGTTCCTGGTCCCTCTT 60.104 55.000 0.00 0.00 0.00 2.85
2960 3176 0.771127 TGGTTCCTGGTCCCTCTTTG 59.229 55.000 0.00 0.00 0.00 2.77
2961 3177 0.609406 GGTTCCTGGTCCCTCTTTGC 60.609 60.000 0.00 0.00 0.00 3.68
2962 3178 0.609406 GTTCCTGGTCCCTCTTTGCC 60.609 60.000 0.00 0.00 0.00 4.52
2963 3179 0.772124 TTCCTGGTCCCTCTTTGCCT 60.772 55.000 0.00 0.00 0.00 4.75
2964 3180 1.001641 CCTGGTCCCTCTTTGCCTG 60.002 63.158 0.00 0.00 0.00 4.85
2965 3181 1.492133 CCTGGTCCCTCTTTGCCTGA 61.492 60.000 0.00 0.00 0.00 3.86
2969 3185 2.647299 TGGTCCCTCTTTGCCTGAATAA 59.353 45.455 0.00 0.00 0.00 1.40
2970 3186 3.075283 TGGTCCCTCTTTGCCTGAATAAA 59.925 43.478 0.00 0.00 0.00 1.40
2971 3187 4.264352 TGGTCCCTCTTTGCCTGAATAAAT 60.264 41.667 0.00 0.00 0.00 1.40
2972 3188 5.044476 TGGTCCCTCTTTGCCTGAATAAATA 60.044 40.000 0.00 0.00 0.00 1.40
2974 3190 6.551227 GGTCCCTCTTTGCCTGAATAAATATT 59.449 38.462 0.00 0.00 0.00 1.28
2975 3191 7.069950 GGTCCCTCTTTGCCTGAATAAATATTT 59.930 37.037 5.89 5.89 0.00 1.40
2976 3192 8.478066 GTCCCTCTTTGCCTGAATAAATATTTT 58.522 33.333 5.91 0.00 0.00 1.82
2977 3193 9.045745 TCCCTCTTTGCCTGAATAAATATTTTT 57.954 29.630 5.91 0.00 0.00 1.94
3010 3303 8.642885 CATAGTGATAACTTGATTACTCGATGC 58.357 37.037 0.00 0.00 29.29 3.91
3015 3308 8.946085 TGATAACTTGATTACTCGATGCTTTTT 58.054 29.630 0.00 0.00 0.00 1.94
3045 3338 9.703892 CTGAACTCTTAGGTCATATATGGAAAG 57.296 37.037 12.78 10.61 41.79 2.62
3046 3339 9.213777 TGAACTCTTAGGTCATATATGGAAAGT 57.786 33.333 12.78 4.89 36.94 2.66
3060 3353 2.306847 GGAAAGTTCCAGCAGTTCCAA 58.693 47.619 5.16 0.00 46.76 3.53
3065 3358 3.299503 AGTTCCAGCAGTTCCAATGTTT 58.700 40.909 0.00 0.00 0.00 2.83
3098 3391 8.094548 TGGGTAGACATGTATAATTCTGCATAC 58.905 37.037 0.87 0.00 0.00 2.39
3114 3407 3.118629 TGCATACTCCTCTTCATGTGGAC 60.119 47.826 0.00 0.00 34.88 4.02
3120 3413 4.221703 ACTCCTCTTCATGTGGACTAACTG 59.778 45.833 0.00 0.00 34.88 3.16
3125 3418 5.924356 TCTTCATGTGGACTAACTGTTCAA 58.076 37.500 0.00 0.00 35.63 2.69
3133 3426 8.282455 TGTGGACTAACTGTTCAAATGTTAAA 57.718 30.769 0.00 0.00 35.63 1.52
3135 3428 9.744468 GTGGACTAACTGTTCAAATGTTAAATT 57.256 29.630 0.00 0.00 35.63 1.82
3136 3429 9.959749 TGGACTAACTGTTCAAATGTTAAATTC 57.040 29.630 0.00 0.00 29.66 2.17
3137 3430 9.959749 GGACTAACTGTTCAAATGTTAAATTCA 57.040 29.630 0.00 0.00 0.00 2.57
3142 3435 9.736023 AACTGTTCAAATGTTAAATTCAGTCTC 57.264 29.630 0.00 0.00 33.46 3.36
3143 3436 8.902806 ACTGTTCAAATGTTAAATTCAGTCTCA 58.097 29.630 0.00 0.00 0.00 3.27
3145 3438 9.515020 TGTTCAAATGTTAAATTCAGTCTCAAC 57.485 29.630 0.00 0.00 0.00 3.18
3180 3518 7.863901 ATGATATATACTTCTAGGGATGCCC 57.136 40.000 0.00 0.00 45.90 5.36
3196 3534 4.287067 GGATGCCCAATAAGACCTCAGATA 59.713 45.833 0.00 0.00 0.00 1.98
3199 3537 5.869579 TGCCCAATAAGACCTCAGATAATC 58.130 41.667 0.00 0.00 0.00 1.75
3203 3541 7.690301 GCCCAATAAGACCTCAGATAATCTCAA 60.690 40.741 0.00 0.00 0.00 3.02
3204 3542 8.213679 CCCAATAAGACCTCAGATAATCTCAAA 58.786 37.037 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.496070 TCGTTCACCTCTCCACCTATTG 59.504 50.000 0.00 0.00 0.00 1.90
9 10 2.816411 TCGTTCACCTCTCCACCTATT 58.184 47.619 0.00 0.00 0.00 1.73
10 11 2.526888 TCGTTCACCTCTCCACCTAT 57.473 50.000 0.00 0.00 0.00 2.57
11 12 2.376109 GATCGTTCACCTCTCCACCTA 58.624 52.381 0.00 0.00 0.00 3.08
12 13 1.187087 GATCGTTCACCTCTCCACCT 58.813 55.000 0.00 0.00 0.00 4.00
13 14 0.175989 GGATCGTTCACCTCTCCACC 59.824 60.000 0.00 0.00 0.00 4.61
14 15 0.895530 TGGATCGTTCACCTCTCCAC 59.104 55.000 0.00 0.00 31.19 4.02
15 16 0.895530 GTGGATCGTTCACCTCTCCA 59.104 55.000 0.00 0.00 33.70 3.86
16 17 3.742983 GTGGATCGTTCACCTCTCC 57.257 57.895 0.00 0.00 0.00 3.71
22 23 0.323629 TTGAGGGGTGGATCGTTCAC 59.676 55.000 0.00 0.00 34.61 3.18
23 24 1.060729 TTTGAGGGGTGGATCGTTCA 58.939 50.000 0.00 0.00 0.00 3.18
24 25 2.289565 GATTTGAGGGGTGGATCGTTC 58.710 52.381 0.00 0.00 0.00 3.95
25 26 1.406887 CGATTTGAGGGGTGGATCGTT 60.407 52.381 0.00 0.00 35.98 3.85
26 27 0.178068 CGATTTGAGGGGTGGATCGT 59.822 55.000 0.00 0.00 35.98 3.73
27 28 0.532862 CCGATTTGAGGGGTGGATCG 60.533 60.000 0.00 0.00 39.29 3.69
28 29 0.179018 CCCGATTTGAGGGGTGGATC 60.179 60.000 0.00 0.00 45.14 3.36
29 30 1.922821 CCCGATTTGAGGGGTGGAT 59.077 57.895 0.00 0.00 45.14 3.41
30 31 3.410541 CCCGATTTGAGGGGTGGA 58.589 61.111 0.00 0.00 45.14 4.02
36 37 4.076394 TGTAAGAAAACCCCGATTTGAGG 58.924 43.478 0.00 0.00 0.00 3.86
37 38 4.517453 TGTGTAAGAAAACCCCGATTTGAG 59.483 41.667 0.00 0.00 0.00 3.02
38 39 4.462133 TGTGTAAGAAAACCCCGATTTGA 58.538 39.130 0.00 0.00 0.00 2.69
39 40 4.839668 TGTGTAAGAAAACCCCGATTTG 57.160 40.909 0.00 0.00 0.00 2.32
40 41 5.778862 CATTGTGTAAGAAAACCCCGATTT 58.221 37.500 0.00 0.00 0.00 2.17
41 42 4.321675 GCATTGTGTAAGAAAACCCCGATT 60.322 41.667 0.00 0.00 0.00 3.34
42 43 3.192633 GCATTGTGTAAGAAAACCCCGAT 59.807 43.478 0.00 0.00 0.00 4.18
43 44 2.554893 GCATTGTGTAAGAAAACCCCGA 59.445 45.455 0.00 0.00 0.00 5.14
44 45 2.352323 GGCATTGTGTAAGAAAACCCCG 60.352 50.000 0.00 0.00 0.00 5.73
45 46 2.352323 CGGCATTGTGTAAGAAAACCCC 60.352 50.000 0.00 0.00 0.00 4.95
46 47 2.295070 ACGGCATTGTGTAAGAAAACCC 59.705 45.455 0.00 0.00 0.00 4.11
47 48 3.305110 CACGGCATTGTGTAAGAAAACC 58.695 45.455 0.00 0.00 35.12 3.27
48 49 2.724174 GCACGGCATTGTGTAAGAAAAC 59.276 45.455 5.11 0.00 41.94 2.43
49 50 2.359214 TGCACGGCATTGTGTAAGAAAA 59.641 40.909 5.11 0.00 41.94 2.29
50 51 1.950216 TGCACGGCATTGTGTAAGAAA 59.050 42.857 5.11 0.00 41.94 2.52
51 52 1.598882 TGCACGGCATTGTGTAAGAA 58.401 45.000 5.11 0.00 41.94 2.52
52 53 3.314083 TGCACGGCATTGTGTAAGA 57.686 47.368 5.11 0.00 41.94 2.10
62 63 1.002659 ACAAGTACCTAATGCACGGCA 59.997 47.619 0.00 1.01 44.86 5.69
63 64 1.734163 ACAAGTACCTAATGCACGGC 58.266 50.000 0.00 0.00 0.00 5.68
64 65 2.864343 GCTACAAGTACCTAATGCACGG 59.136 50.000 0.00 0.00 0.00 4.94
65 66 3.551890 CAGCTACAAGTACCTAATGCACG 59.448 47.826 0.00 0.00 0.00 5.34
66 67 3.309954 GCAGCTACAAGTACCTAATGCAC 59.690 47.826 0.00 0.00 0.00 4.57
67 68 3.055458 TGCAGCTACAAGTACCTAATGCA 60.055 43.478 0.00 0.00 38.70 3.96
68 69 3.531538 TGCAGCTACAAGTACCTAATGC 58.468 45.455 0.00 0.00 0.00 3.56
69 70 7.969536 ATAATGCAGCTACAAGTACCTAATG 57.030 36.000 0.00 0.00 0.00 1.90
70 71 8.840321 CAAATAATGCAGCTACAAGTACCTAAT 58.160 33.333 0.00 0.00 0.00 1.73
71 72 7.282224 CCAAATAATGCAGCTACAAGTACCTAA 59.718 37.037 0.00 0.00 0.00 2.69
72 73 6.765989 CCAAATAATGCAGCTACAAGTACCTA 59.234 38.462 0.00 0.00 0.00 3.08
73 74 5.590259 CCAAATAATGCAGCTACAAGTACCT 59.410 40.000 0.00 0.00 0.00 3.08
74 75 5.221048 CCCAAATAATGCAGCTACAAGTACC 60.221 44.000 0.00 0.00 0.00 3.34
75 76 5.588648 TCCCAAATAATGCAGCTACAAGTAC 59.411 40.000 0.00 0.00 0.00 2.73
76 77 5.588648 GTCCCAAATAATGCAGCTACAAGTA 59.411 40.000 0.00 0.00 0.00 2.24
77 78 4.399303 GTCCCAAATAATGCAGCTACAAGT 59.601 41.667 0.00 0.00 0.00 3.16
78 79 4.496341 CGTCCCAAATAATGCAGCTACAAG 60.496 45.833 0.00 0.00 0.00 3.16
79 80 3.376859 CGTCCCAAATAATGCAGCTACAA 59.623 43.478 0.00 0.00 0.00 2.41
80 81 2.942376 CGTCCCAAATAATGCAGCTACA 59.058 45.455 0.00 0.00 0.00 2.74
81 82 2.943033 ACGTCCCAAATAATGCAGCTAC 59.057 45.455 0.00 0.00 0.00 3.58
82 83 2.942376 CACGTCCCAAATAATGCAGCTA 59.058 45.455 0.00 0.00 0.00 3.32
83 84 1.745087 CACGTCCCAAATAATGCAGCT 59.255 47.619 0.00 0.00 0.00 4.24
84 85 1.742831 TCACGTCCCAAATAATGCAGC 59.257 47.619 0.00 0.00 0.00 5.25
85 86 3.440173 ACTTCACGTCCCAAATAATGCAG 59.560 43.478 0.00 0.00 0.00 4.41
86 87 3.417101 ACTTCACGTCCCAAATAATGCA 58.583 40.909 0.00 0.00 0.00 3.96
87 88 4.434713 AACTTCACGTCCCAAATAATGC 57.565 40.909 0.00 0.00 0.00 3.56
88 89 6.699642 ACAAAAACTTCACGTCCCAAATAATG 59.300 34.615 0.00 0.00 0.00 1.90
89 90 6.699642 CACAAAAACTTCACGTCCCAAATAAT 59.300 34.615 0.00 0.00 0.00 1.28
90 91 6.037098 CACAAAAACTTCACGTCCCAAATAA 58.963 36.000 0.00 0.00 0.00 1.40
91 92 5.583495 CACAAAAACTTCACGTCCCAAATA 58.417 37.500 0.00 0.00 0.00 1.40
92 93 4.429108 CACAAAAACTTCACGTCCCAAAT 58.571 39.130 0.00 0.00 0.00 2.32
93 94 3.839293 CACAAAAACTTCACGTCCCAAA 58.161 40.909 0.00 0.00 0.00 3.28
94 95 2.416162 GCACAAAAACTTCACGTCCCAA 60.416 45.455 0.00 0.00 0.00 4.12
95 96 1.133407 GCACAAAAACTTCACGTCCCA 59.867 47.619 0.00 0.00 0.00 4.37
96 97 1.535226 GGCACAAAAACTTCACGTCCC 60.535 52.381 0.00 0.00 0.00 4.46
97 98 1.404035 AGGCACAAAAACTTCACGTCC 59.596 47.619 0.00 0.00 0.00 4.79
98 99 2.096819 TCAGGCACAAAAACTTCACGTC 59.903 45.455 0.00 0.00 0.00 4.34
99 100 2.088423 TCAGGCACAAAAACTTCACGT 58.912 42.857 0.00 0.00 0.00 4.49
100 101 2.719798 CTCAGGCACAAAAACTTCACG 58.280 47.619 0.00 0.00 0.00 4.35
101 102 2.099756 AGCTCAGGCACAAAAACTTCAC 59.900 45.455 0.00 0.00 41.70 3.18
102 103 2.358898 GAGCTCAGGCACAAAAACTTCA 59.641 45.455 9.40 0.00 41.70 3.02
103 104 2.358898 TGAGCTCAGGCACAAAAACTTC 59.641 45.455 13.74 0.00 41.70 3.01
104 105 2.378038 TGAGCTCAGGCACAAAAACTT 58.622 42.857 13.74 0.00 41.70 2.66
105 106 2.057137 TGAGCTCAGGCACAAAAACT 57.943 45.000 13.74 0.00 41.70 2.66
106 107 3.375782 AATGAGCTCAGGCACAAAAAC 57.624 42.857 22.96 0.00 41.82 2.43
107 108 3.384146 TCAAATGAGCTCAGGCACAAAAA 59.616 39.130 22.96 0.00 41.82 1.94
108 109 2.957680 TCAAATGAGCTCAGGCACAAAA 59.042 40.909 22.96 0.00 41.82 2.44
109 110 2.555325 CTCAAATGAGCTCAGGCACAAA 59.445 45.455 22.96 2.94 41.82 2.83
110 111 2.156917 CTCAAATGAGCTCAGGCACAA 58.843 47.619 22.96 4.51 41.82 3.33
111 112 1.817357 CTCAAATGAGCTCAGGCACA 58.183 50.000 22.96 3.90 42.60 4.57
121 122 4.521146 ACTATTCACCCAGCTCAAATGAG 58.479 43.478 6.05 6.05 44.75 2.90
122 123 4.574674 ACTATTCACCCAGCTCAAATGA 57.425 40.909 0.00 0.00 0.00 2.57
123 124 6.757897 TTTACTATTCACCCAGCTCAAATG 57.242 37.500 0.00 0.00 0.00 2.32
124 125 7.201732 CGATTTTACTATTCACCCAGCTCAAAT 60.202 37.037 0.00 0.00 0.00 2.32
125 126 6.093495 CGATTTTACTATTCACCCAGCTCAAA 59.907 38.462 0.00 0.00 0.00 2.69
126 127 5.584649 CGATTTTACTATTCACCCAGCTCAA 59.415 40.000 0.00 0.00 0.00 3.02
127 128 5.105106 TCGATTTTACTATTCACCCAGCTCA 60.105 40.000 0.00 0.00 0.00 4.26
128 129 5.357257 TCGATTTTACTATTCACCCAGCTC 58.643 41.667 0.00 0.00 0.00 4.09
129 130 5.353394 TCGATTTTACTATTCACCCAGCT 57.647 39.130 0.00 0.00 0.00 4.24
130 131 6.431198 TTTCGATTTTACTATTCACCCAGC 57.569 37.500 0.00 0.00 0.00 4.85
131 132 8.293867 TGTTTTTCGATTTTACTATTCACCCAG 58.706 33.333 0.00 0.00 0.00 4.45
132 133 8.167605 TGTTTTTCGATTTTACTATTCACCCA 57.832 30.769 0.00 0.00 0.00 4.51
133 134 9.634163 AATGTTTTTCGATTTTACTATTCACCC 57.366 29.630 0.00 0.00 0.00 4.61
184 185 3.594603 TGTCAAAGTTTGCCGGAAAAA 57.405 38.095 9.87 3.66 0.00 1.94
185 186 3.594603 TTGTCAAAGTTTGCCGGAAAA 57.405 38.095 5.05 3.64 0.00 2.29
186 187 3.594603 TTTGTCAAAGTTTGCCGGAAA 57.405 38.095 5.05 0.00 0.00 3.13
187 188 3.810310 ATTTGTCAAAGTTTGCCGGAA 57.190 38.095 5.05 0.00 0.00 4.30
188 189 5.242838 AGAATATTTGTCAAAGTTTGCCGGA 59.757 36.000 5.05 0.00 0.00 5.14
189 190 5.469479 AGAATATTTGTCAAAGTTTGCCGG 58.531 37.500 10.90 0.00 0.00 6.13
190 191 8.020819 TCTTAGAATATTTGTCAAAGTTTGCCG 58.979 33.333 10.90 0.00 0.00 5.69
191 192 9.346725 CTCTTAGAATATTTGTCAAAGTTTGCC 57.653 33.333 10.90 0.00 0.00 4.52
192 193 9.346725 CCTCTTAGAATATTTGTCAAAGTTTGC 57.653 33.333 10.90 6.87 0.00 3.68
196 197 8.515414 GCAACCTCTTAGAATATTTGTCAAAGT 58.485 33.333 4.03 0.00 0.00 2.66
197 198 8.514594 TGCAACCTCTTAGAATATTTGTCAAAG 58.485 33.333 4.03 0.00 0.00 2.77
198 199 8.296713 GTGCAACCTCTTAGAATATTTGTCAAA 58.703 33.333 0.00 0.00 0.00 2.69
199 200 7.446931 TGTGCAACCTCTTAGAATATTTGTCAA 59.553 33.333 0.00 0.00 34.36 3.18
200 201 6.939730 TGTGCAACCTCTTAGAATATTTGTCA 59.060 34.615 0.00 0.00 34.36 3.58
201 202 7.377766 TGTGCAACCTCTTAGAATATTTGTC 57.622 36.000 0.00 0.00 34.36 3.18
202 203 7.759489 TTGTGCAACCTCTTAGAATATTTGT 57.241 32.000 0.00 0.00 34.36 2.83
203 204 9.643693 AAATTGTGCAACCTCTTAGAATATTTG 57.356 29.630 0.00 0.00 34.36 2.32
204 205 9.860898 GAAATTGTGCAACCTCTTAGAATATTT 57.139 29.630 0.00 0.00 34.36 1.40
205 206 9.023962 TGAAATTGTGCAACCTCTTAGAATATT 57.976 29.630 0.00 0.00 34.36 1.28
206 207 8.579850 TGAAATTGTGCAACCTCTTAGAATAT 57.420 30.769 0.00 0.00 34.36 1.28
207 208 7.994425 TGAAATTGTGCAACCTCTTAGAATA 57.006 32.000 0.00 0.00 34.36 1.75
208 209 6.899393 TGAAATTGTGCAACCTCTTAGAAT 57.101 33.333 0.00 0.00 34.36 2.40
209 210 6.899393 ATGAAATTGTGCAACCTCTTAGAA 57.101 33.333 0.00 0.00 34.36 2.10
210 211 6.899393 AATGAAATTGTGCAACCTCTTAGA 57.101 33.333 0.00 0.00 33.44 2.10
228 229 8.754230 TTTCATAAATGTGATTTCGCAATGAA 57.246 26.923 12.36 12.36 38.38 2.57
229 230 8.028354 ACTTTCATAAATGTGATTTCGCAATGA 58.972 29.630 0.00 1.13 40.04 2.57
230 231 8.176814 ACTTTCATAAATGTGATTTCGCAATG 57.823 30.769 0.00 0.00 40.04 2.82
231 232 7.218773 CGACTTTCATAAATGTGATTTCGCAAT 59.781 33.333 0.00 0.00 40.04 3.56
232 233 6.522855 CGACTTTCATAAATGTGATTTCGCAA 59.477 34.615 0.00 0.00 40.04 4.85
233 234 6.020984 CGACTTTCATAAATGTGATTTCGCA 58.979 36.000 0.00 0.00 40.98 5.10
234 235 5.452302 CCGACTTTCATAAATGTGATTTCGC 59.548 40.000 0.00 0.00 33.82 4.70
235 236 5.965334 CCCGACTTTCATAAATGTGATTTCG 59.035 40.000 0.00 0.00 33.82 3.46
236 237 5.743872 GCCCGACTTTCATAAATGTGATTTC 59.256 40.000 0.00 0.00 33.82 2.17
237 238 5.184864 TGCCCGACTTTCATAAATGTGATTT 59.815 36.000 0.00 0.00 36.29 2.17
238 239 4.704540 TGCCCGACTTTCATAAATGTGATT 59.295 37.500 0.00 0.00 0.00 2.57
239 240 4.269183 TGCCCGACTTTCATAAATGTGAT 58.731 39.130 0.00 0.00 0.00 3.06
240 241 3.680490 TGCCCGACTTTCATAAATGTGA 58.320 40.909 0.00 0.00 0.00 3.58
241 242 4.433186 TTGCCCGACTTTCATAAATGTG 57.567 40.909 0.00 0.00 0.00 3.21
242 243 5.461032 TTTTGCCCGACTTTCATAAATGT 57.539 34.783 0.00 0.00 0.00 2.71
266 267 9.768662 AGCATTTTCAGAGTATTGATTTTGTTT 57.231 25.926 0.00 0.00 0.00 2.83
268 269 9.846248 GTAGCATTTTCAGAGTATTGATTTTGT 57.154 29.630 0.00 0.00 0.00 2.83
274 275 9.283768 TCAAAAGTAGCATTTTCAGAGTATTGA 57.716 29.630 0.00 0.00 30.01 2.57
275 276 9.897744 TTCAAAAGTAGCATTTTCAGAGTATTG 57.102 29.630 0.00 0.00 30.01 1.90
278 279 8.076178 GCTTTCAAAAGTAGCATTTTCAGAGTA 58.924 33.333 4.54 0.00 38.28 2.59
279 280 6.920210 GCTTTCAAAAGTAGCATTTTCAGAGT 59.080 34.615 4.54 0.00 38.28 3.24
280 281 6.919662 TGCTTTCAAAAGTAGCATTTTCAGAG 59.080 34.615 4.54 0.00 39.79 3.35
281 282 6.804677 TGCTTTCAAAAGTAGCATTTTCAGA 58.195 32.000 4.54 0.00 39.79 3.27
289 290 6.420604 GCTACAAAATGCTTTCAAAAGTAGCA 59.579 34.615 13.86 0.00 46.60 3.49
290 291 6.811299 GCTACAAAATGCTTTCAAAAGTAGC 58.189 36.000 0.00 0.00 43.13 3.58
291 292 7.649306 AGTGCTACAAAATGCTTTCAAAAGTAG 59.351 33.333 4.54 0.00 38.28 2.57
292 293 7.434897 CAGTGCTACAAAATGCTTTCAAAAGTA 59.565 33.333 4.54 0.30 38.28 2.24
293 294 6.256321 CAGTGCTACAAAATGCTTTCAAAAGT 59.744 34.615 4.54 0.00 38.28 2.66
294 295 6.476380 TCAGTGCTACAAAATGCTTTCAAAAG 59.524 34.615 0.00 0.00 39.03 2.27
295 296 6.336566 TCAGTGCTACAAAATGCTTTCAAAA 58.663 32.000 0.00 0.00 0.00 2.44
296 297 5.900425 TCAGTGCTACAAAATGCTTTCAAA 58.100 33.333 0.00 0.00 0.00 2.69
297 298 5.512753 TCAGTGCTACAAAATGCTTTCAA 57.487 34.783 0.00 0.00 0.00 2.69
298 299 5.710513 ATCAGTGCTACAAAATGCTTTCA 57.289 34.783 0.00 0.00 0.00 2.69
299 300 7.042523 ACAAAATCAGTGCTACAAAATGCTTTC 60.043 33.333 0.00 0.00 0.00 2.62
300 301 6.762661 ACAAAATCAGTGCTACAAAATGCTTT 59.237 30.769 0.00 0.00 0.00 3.51
301 302 6.282930 ACAAAATCAGTGCTACAAAATGCTT 58.717 32.000 0.00 0.00 0.00 3.91
302 303 5.846203 ACAAAATCAGTGCTACAAAATGCT 58.154 33.333 0.00 0.00 0.00 3.79
303 304 6.529463 AACAAAATCAGTGCTACAAAATGC 57.471 33.333 0.00 0.00 0.00 3.56
329 330 3.577649 TTGTGAAAGTCGTGGCAAAAA 57.422 38.095 0.00 0.00 0.00 1.94
330 331 3.577649 TTTGTGAAAGTCGTGGCAAAA 57.422 38.095 0.00 0.00 0.00 2.44
331 332 3.119316 ACATTTGTGAAAGTCGTGGCAAA 60.119 39.130 0.00 0.00 0.00 3.68
332 333 2.425312 ACATTTGTGAAAGTCGTGGCAA 59.575 40.909 0.00 0.00 0.00 4.52
333 334 2.020720 ACATTTGTGAAAGTCGTGGCA 58.979 42.857 0.00 0.00 0.00 4.92
334 335 2.774439 ACATTTGTGAAAGTCGTGGC 57.226 45.000 0.00 0.00 0.00 5.01
345 346 6.989796 TTTCATCACGAAATCACATTTGTG 57.010 33.333 4.29 4.29 41.67 3.33
346 347 8.592105 AATTTTCATCACGAAATCACATTTGT 57.408 26.923 0.00 0.00 43.12 2.83
347 348 9.308623 CAAATTTTCATCACGAAATCACATTTG 57.691 29.630 0.00 0.00 43.12 2.32
348 349 8.011106 GCAAATTTTCATCACGAAATCACATTT 58.989 29.630 0.00 0.00 43.12 2.32
349 350 7.171167 TGCAAATTTTCATCACGAAATCACATT 59.829 29.630 0.00 0.00 43.12 2.71
350 351 6.645827 TGCAAATTTTCATCACGAAATCACAT 59.354 30.769 0.00 0.00 43.12 3.21
351 352 5.981915 TGCAAATTTTCATCACGAAATCACA 59.018 32.000 0.00 0.00 43.12 3.58
352 353 6.450845 TGCAAATTTTCATCACGAAATCAC 57.549 33.333 0.00 0.00 43.12 3.06
353 354 7.224362 AGTTTGCAAATTTTCATCACGAAATCA 59.776 29.630 16.21 0.00 43.12 2.57
354 355 7.566709 AGTTTGCAAATTTTCATCACGAAATC 58.433 30.769 16.21 0.00 43.12 2.17
355 356 7.481275 AGTTTGCAAATTTTCATCACGAAAT 57.519 28.000 16.21 0.00 43.12 2.17
356 357 6.900568 AGTTTGCAAATTTTCATCACGAAA 57.099 29.167 16.21 0.00 41.95 3.46
357 358 6.900568 AAGTTTGCAAATTTTCATCACGAA 57.099 29.167 16.21 0.00 0.00 3.85
358 359 6.900568 AAAGTTTGCAAATTTTCATCACGA 57.099 29.167 22.59 0.00 0.00 4.35
359 360 7.691463 TCAAAAAGTTTGCAAATTTTCATCACG 59.309 29.630 26.61 14.55 29.19 4.35
360 361 8.892887 TCAAAAAGTTTGCAAATTTTCATCAC 57.107 26.923 26.61 8.33 29.19 3.06
361 362 9.339492 GTTCAAAAAGTTTGCAAATTTTCATCA 57.661 25.926 26.61 13.00 29.19 3.07
362 363 9.339492 TGTTCAAAAAGTTTGCAAATTTTCATC 57.661 25.926 26.61 17.29 29.19 2.92
363 364 9.857957 ATGTTCAAAAAGTTTGCAAATTTTCAT 57.142 22.222 26.61 21.70 29.19 2.57
364 365 9.688592 AATGTTCAAAAAGTTTGCAAATTTTCA 57.311 22.222 26.61 20.74 29.19 2.69
367 368 9.473640 ACAAATGTTCAAAAAGTTTGCAAATTT 57.526 22.222 16.21 14.78 34.12 1.82
368 369 9.127006 GACAAATGTTCAAAAAGTTTGCAAATT 57.873 25.926 16.21 8.48 34.12 1.82
369 370 8.295288 TGACAAATGTTCAAAAAGTTTGCAAAT 58.705 25.926 16.21 0.00 34.12 2.32
370 371 7.642669 TGACAAATGTTCAAAAAGTTTGCAAA 58.357 26.923 8.05 8.05 34.12 3.68
371 372 7.194607 TGACAAATGTTCAAAAAGTTTGCAA 57.805 28.000 0.00 0.00 34.12 4.08
372 373 6.791887 TGACAAATGTTCAAAAAGTTTGCA 57.208 29.167 0.00 0.00 34.12 4.08
373 374 7.802720 ACTTTGACAAATGTTCAAAAAGTTTGC 59.197 29.630 0.05 0.00 34.12 3.68
374 375 9.662545 AACTTTGACAAATGTTCAAAAAGTTTG 57.337 25.926 16.23 0.00 33.68 2.93
376 377 9.662545 CAAACTTTGACAAATGTTCAAAAAGTT 57.337 25.926 16.23 16.23 33.75 2.66
377 378 7.802720 GCAAACTTTGACAAATGTTCAAAAAGT 59.197 29.630 5.65 9.99 33.75 2.66
378 379 7.271008 GGCAAACTTTGACAAATGTTCAAAAAG 59.729 33.333 5.65 9.57 38.99 2.27
379 380 7.080724 GGCAAACTTTGACAAATGTTCAAAAA 58.919 30.769 5.65 1.30 38.99 1.94
380 381 6.606768 GGCAAACTTTGACAAATGTTCAAAA 58.393 32.000 5.65 3.04 38.99 2.44
381 382 6.175712 GGCAAACTTTGACAAATGTTCAAA 57.824 33.333 5.65 9.30 38.99 2.69
382 383 5.793026 GGCAAACTTTGACAAATGTTCAA 57.207 34.783 5.65 0.00 38.99 2.69
437 438 8.088365 GGGATGAACAGTAACTTAAAAGCATTT 58.912 33.333 0.00 0.00 42.41 2.32
438 439 7.574967 CGGGATGAACAGTAACTTAAAAGCATT 60.575 37.037 0.00 0.00 0.00 3.56
439 440 6.128007 CGGGATGAACAGTAACTTAAAAGCAT 60.128 38.462 0.00 0.00 0.00 3.79
440 441 5.180492 CGGGATGAACAGTAACTTAAAAGCA 59.820 40.000 0.00 0.00 0.00 3.91
441 442 5.410439 TCGGGATGAACAGTAACTTAAAAGC 59.590 40.000 0.00 0.00 0.00 3.51
442 443 7.429636 TTCGGGATGAACAGTAACTTAAAAG 57.570 36.000 0.00 0.00 0.00 2.27
456 457 3.009723 GCTCAAATGAGTTCGGGATGAA 58.990 45.455 11.77 0.00 43.85 2.57
457 458 2.237143 AGCTCAAATGAGTTCGGGATGA 59.763 45.455 11.77 0.00 43.85 2.92
458 459 2.611292 GAGCTCAAATGAGTTCGGGATG 59.389 50.000 9.40 0.00 41.33 3.51
459 460 2.911484 GAGCTCAAATGAGTTCGGGAT 58.089 47.619 9.40 0.00 41.33 3.85
460 461 2.386661 GAGCTCAAATGAGTTCGGGA 57.613 50.000 9.40 0.00 41.33 5.14
465 466 3.498774 ACACCTGAGCTCAAATGAGTT 57.501 42.857 26.02 5.90 43.85 3.01
466 467 3.834813 TCTACACCTGAGCTCAAATGAGT 59.165 43.478 26.02 19.14 43.85 3.41
467 468 4.462508 TCTACACCTGAGCTCAAATGAG 57.537 45.455 26.02 19.27 44.75 2.90
468 469 4.323028 CCTTCTACACCTGAGCTCAAATGA 60.323 45.833 26.02 13.20 0.00 2.57
469 470 3.937706 CCTTCTACACCTGAGCTCAAATG 59.062 47.826 18.85 19.69 0.00 2.32
470 471 3.054802 CCCTTCTACACCTGAGCTCAAAT 60.055 47.826 18.85 5.66 0.00 2.32
471 472 2.303022 CCCTTCTACACCTGAGCTCAAA 59.697 50.000 18.85 6.23 0.00 2.69
472 473 1.902508 CCCTTCTACACCTGAGCTCAA 59.097 52.381 18.85 0.82 0.00 3.02
473 474 1.203187 ACCCTTCTACACCTGAGCTCA 60.203 52.381 17.19 17.19 0.00 4.26
474 475 1.562783 ACCCTTCTACACCTGAGCTC 58.437 55.000 6.82 6.82 0.00 4.09
475 476 2.043252 AGTACCCTTCTACACCTGAGCT 59.957 50.000 0.00 0.00 0.00 4.09
476 477 2.458620 AGTACCCTTCTACACCTGAGC 58.541 52.381 0.00 0.00 0.00 4.26
477 478 4.380655 CGAAAGTACCCTTCTACACCTGAG 60.381 50.000 0.00 0.00 0.00 3.35
478 479 3.508793 CGAAAGTACCCTTCTACACCTGA 59.491 47.826 0.00 0.00 0.00 3.86
479 480 3.846360 CGAAAGTACCCTTCTACACCTG 58.154 50.000 0.00 0.00 0.00 4.00
480 481 2.233186 GCGAAAGTACCCTTCTACACCT 59.767 50.000 0.00 0.00 0.00 4.00
481 482 2.028748 TGCGAAAGTACCCTTCTACACC 60.029 50.000 0.00 0.00 0.00 4.16
482 483 3.308438 TGCGAAAGTACCCTTCTACAC 57.692 47.619 0.00 0.00 0.00 2.90
483 484 4.546829 AATGCGAAAGTACCCTTCTACA 57.453 40.909 0.00 0.00 0.00 2.74
484 485 7.279313 TCAAATAATGCGAAAGTACCCTTCTAC 59.721 37.037 0.00 0.00 0.00 2.59
485 486 7.332557 TCAAATAATGCGAAAGTACCCTTCTA 58.667 34.615 0.00 0.00 0.00 2.10
486 487 6.177610 TCAAATAATGCGAAAGTACCCTTCT 58.822 36.000 0.00 0.00 0.00 2.85
487 488 6.431198 TCAAATAATGCGAAAGTACCCTTC 57.569 37.500 0.00 0.00 0.00 3.46
488 489 7.339466 AGAATCAAATAATGCGAAAGTACCCTT 59.661 33.333 0.00 0.00 0.00 3.95
489 490 6.828785 AGAATCAAATAATGCGAAAGTACCCT 59.171 34.615 0.00 0.00 0.00 4.34
490 491 7.027778 AGAATCAAATAATGCGAAAGTACCC 57.972 36.000 0.00 0.00 0.00 3.69
491 492 8.911247 AAAGAATCAAATAATGCGAAAGTACC 57.089 30.769 0.00 0.00 0.00 3.34
497 498 9.638239 AGCTTTTAAAGAATCAAATAATGCGAA 57.362 25.926 9.10 0.00 0.00 4.70
498 499 9.638239 AAGCTTTTAAAGAATCAAATAATGCGA 57.362 25.926 9.10 0.00 0.00 5.10
541 556 1.228429 CCCGTCTGGCCCTTTTTCA 60.228 57.895 0.00 0.00 0.00 2.69
542 557 0.538746 TTCCCGTCTGGCCCTTTTTC 60.539 55.000 0.00 0.00 0.00 2.29
557 572 0.179012 TCCCTTGTTCGGTTGTTCCC 60.179 55.000 0.00 0.00 0.00 3.97
558 573 0.949397 GTCCCTTGTTCGGTTGTTCC 59.051 55.000 0.00 0.00 0.00 3.62
559 574 1.332686 GTGTCCCTTGTTCGGTTGTTC 59.667 52.381 0.00 0.00 0.00 3.18
561 576 0.464916 GGTGTCCCTTGTTCGGTTGT 60.465 55.000 0.00 0.00 0.00 3.32
564 579 1.637724 TTGGGTGTCCCTTGTTCGGT 61.638 55.000 6.38 0.00 45.70 4.69
565 580 0.466555 TTTGGGTGTCCCTTGTTCGG 60.467 55.000 6.38 0.00 45.70 4.30
577 594 1.029947 GCGGTGATAGGGTTTGGGTG 61.030 60.000 0.00 0.00 0.00 4.61
604 621 5.180117 CAGCGGGATATGTTAGGAATTTGAG 59.820 44.000 0.00 0.00 0.00 3.02
614 634 2.158871 GGTGTTCCAGCGGGATATGTTA 60.159 50.000 6.36 0.00 44.48 2.41
625 645 2.474816 GAGATATCACGGTGTTCCAGC 58.525 52.381 8.17 0.00 0.00 4.85
626 646 2.732366 CGAGATATCACGGTGTTCCAG 58.268 52.381 13.94 0.00 0.00 3.86
627 647 1.202371 GCGAGATATCACGGTGTTCCA 60.202 52.381 21.47 0.00 0.00 3.53
628 648 1.488527 GCGAGATATCACGGTGTTCC 58.511 55.000 21.47 2.86 0.00 3.62
629 649 1.488527 GGCGAGATATCACGGTGTTC 58.511 55.000 21.47 6.62 0.00 3.18
630 650 0.248907 CGGCGAGATATCACGGTGTT 60.249 55.000 21.47 2.24 0.00 3.32
631 651 1.359117 CGGCGAGATATCACGGTGT 59.641 57.895 21.47 0.00 0.00 4.16
632 652 1.371758 CCGGCGAGATATCACGGTG 60.372 63.158 21.47 0.56 39.70 4.94
633 653 2.561956 CCCGGCGAGATATCACGGT 61.562 63.158 21.47 0.00 42.81 4.83
634 654 2.258591 CCCGGCGAGATATCACGG 59.741 66.667 21.47 18.69 43.89 4.94
635 655 2.258591 CCCCGGCGAGATATCACG 59.741 66.667 16.93 16.93 0.00 4.35
636 656 1.006102 CACCCCGGCGAGATATCAC 60.006 63.158 9.30 0.00 0.00 3.06
637 657 2.867855 GCACCCCGGCGAGATATCA 61.868 63.158 9.30 0.00 0.00 2.15
638 658 2.048127 GCACCCCGGCGAGATATC 60.048 66.667 9.30 0.00 0.00 1.63
639 659 3.626924 GGCACCCCGGCGAGATAT 61.627 66.667 9.30 0.00 33.57 1.63
727 770 3.564027 GAATCAGAACGCGGCGGG 61.564 66.667 27.37 23.00 0.00 6.13
769 813 5.008712 AGACAAGAACGATTTGAGGGAAAAC 59.991 40.000 0.00 0.00 0.00 2.43
770 814 5.130350 AGACAAGAACGATTTGAGGGAAAA 58.870 37.500 0.00 0.00 0.00 2.29
771 815 4.714632 AGACAAGAACGATTTGAGGGAAA 58.285 39.130 0.00 0.00 0.00 3.13
772 816 4.351874 AGACAAGAACGATTTGAGGGAA 57.648 40.909 0.00 0.00 0.00 3.97
795 839 0.750249 TTCCAGCGACTCTGAACACA 59.250 50.000 0.00 0.00 45.72 3.72
796 840 1.865865 TTTCCAGCGACTCTGAACAC 58.134 50.000 0.00 0.00 45.72 3.32
800 844 2.662006 CTGATTTCCAGCGACTCTGA 57.338 50.000 0.00 0.00 45.72 3.27
810 854 2.745884 CGGCGGTGCTGATTTCCA 60.746 61.111 0.00 0.00 37.02 3.53
812 856 4.179579 GGCGGCGGTGCTGATTTC 62.180 66.667 9.78 0.00 37.02 2.17
832 882 2.361610 CAGCATTGCGAACCCCCT 60.362 61.111 2.38 0.00 0.00 4.79
848 899 4.624364 CGATGGCGGGCTATGGCA 62.624 66.667 2.58 0.00 46.52 4.92
880 965 1.826096 GGAGAGGCGAGAAGGTTTACT 59.174 52.381 0.00 0.00 0.00 2.24
905 992 2.583593 GCGTGACGGATCTCTGGC 60.584 66.667 7.25 0.00 0.00 4.85
910 997 3.774959 GATGGCGCGTGACGGATCT 62.775 63.158 8.43 0.00 43.93 2.75
959 1069 2.428530 TCCGTCAGATCAGATTCCAGTG 59.571 50.000 0.00 0.00 0.00 3.66
1179 1313 1.758514 GTGGCTGAGGATCGGGAGA 60.759 63.158 0.00 0.00 43.35 3.71
1206 1340 1.006922 GAGGCAGGTTTTGTGCAGC 60.007 57.895 0.00 0.00 43.12 5.25
1208 1348 1.108727 CAGGAGGCAGGTTTTGTGCA 61.109 55.000 0.00 0.00 43.12 4.57
1212 1352 2.543653 CGAAAACAGGAGGCAGGTTTTG 60.544 50.000 6.47 0.00 42.79 2.44
1283 1435 0.520827 CTCGAGTTCACCGTAGTCGC 60.521 60.000 3.62 0.00 38.12 5.19
1499 1655 4.689071 TGCGTCGTATGGATTGTAGATTT 58.311 39.130 0.00 0.00 0.00 2.17
1500 1656 4.316205 TGCGTCGTATGGATTGTAGATT 57.684 40.909 0.00 0.00 0.00 2.40
1501 1657 4.316205 TTGCGTCGTATGGATTGTAGAT 57.684 40.909 0.00 0.00 0.00 1.98
1510 1666 4.328983 AGTTCTGTAATTTGCGTCGTATGG 59.671 41.667 0.00 0.00 0.00 2.74
1616 1772 2.749621 CGTAAAGCCAGCTCCAAGAAAT 59.250 45.455 0.00 0.00 0.00 2.17
1619 1775 0.673644 GCGTAAAGCCAGCTCCAAGA 60.674 55.000 0.00 0.00 40.81 3.02
1686 1842 1.553690 TAAGTCTCCAGTGCAGGCCC 61.554 60.000 0.00 0.00 0.00 5.80
1795 1951 2.325484 TGACTCCTGTAAGCAGTTGGA 58.675 47.619 0.00 0.00 41.02 3.53
1970 2129 3.513515 CCTAGGGCTCATTATCACCTCTC 59.486 52.174 0.00 0.00 32.87 3.20
2023 2188 1.270147 ACGCCTACAAGTGAACTGGAC 60.270 52.381 0.00 0.00 0.00 4.02
2061 2232 6.100279 TCACATATCCTAAGAACTTGCCATCT 59.900 38.462 0.00 0.00 0.00 2.90
2106 2277 4.223255 TGATTGGTAACCCACAAGTCGATA 59.777 41.667 0.00 0.00 41.67 2.92
2192 2363 4.082026 CGAAAAATGGAGGCTCCTGATTTT 60.082 41.667 32.28 29.04 37.46 1.82
2243 2420 1.893137 ACCAGCAGTGTAGAACATCGA 59.107 47.619 0.00 0.00 0.00 3.59
2244 2421 2.370281 ACCAGCAGTGTAGAACATCG 57.630 50.000 0.00 0.00 0.00 3.84
2270 2447 3.202818 ACAGAATAGATGGTCCATTGGCA 59.797 43.478 5.65 0.00 0.00 4.92
2280 2457 4.202161 ACAAGGCTCGTACAGAATAGATGG 60.202 45.833 0.00 0.00 0.00 3.51
2281 2458 4.938080 ACAAGGCTCGTACAGAATAGATG 58.062 43.478 0.00 0.00 0.00 2.90
2291 2468 3.808174 AGAACAAAAGACAAGGCTCGTAC 59.192 43.478 0.00 0.00 0.00 3.67
2325 2509 4.956085 TCAGTTCTACAAGCAGCACTAAA 58.044 39.130 0.00 0.00 0.00 1.85
2351 2535 1.740025 GTGCTCTGCTACCATCCAAAC 59.260 52.381 0.00 0.00 0.00 2.93
2448 2646 8.716779 TGGAAGTAAACGAGGGGTATAAAATAT 58.283 33.333 0.00 0.00 0.00 1.28
2527 2731 9.160496 CATTCCAGATAATATCTTAGGAGCAAC 57.840 37.037 0.00 0.00 37.58 4.17
2573 2781 0.950116 GCAGGATGTCTAGCCATTGC 59.050 55.000 0.00 0.00 39.31 3.56
2632 2840 8.131731 ACTCAAAATAAGACTGAAAGAAAGCAC 58.868 33.333 0.00 0.00 37.43 4.40
2663 2879 5.752955 CCATTTCAACGACTCAACCAAAATT 59.247 36.000 0.00 0.00 0.00 1.82
2678 2894 7.013369 GGAAGGATCCATACTAACCATTTCAAC 59.987 40.741 15.82 0.00 45.79 3.18
2711 2927 6.651225 ACTGAGCAAGGATCAAACTAGTAAAC 59.349 38.462 0.00 0.00 0.00 2.01
2716 2932 3.373439 GCACTGAGCAAGGATCAAACTAG 59.627 47.826 0.00 0.00 44.79 2.57
2739 2955 4.278419 GTCAGGTGCTTAGGACAAAATTGT 59.722 41.667 6.17 0.00 45.65 2.71
2743 2959 3.569194 TGTCAGGTGCTTAGGACAAAA 57.431 42.857 6.17 0.00 37.33 2.44
2744 2960 3.411446 CATGTCAGGTGCTTAGGACAAA 58.589 45.455 6.17 0.00 42.83 2.83
2782 2998 4.398988 TGCCTGAATAAAGCATTACCACAG 59.601 41.667 0.00 0.00 0.00 3.66
2806 3022 5.751243 AACTGAATTAAGTCGTGCAAGTT 57.249 34.783 0.00 0.00 0.00 2.66
2814 3030 6.401153 GCTGAGTACCAAACTGAATTAAGTCG 60.401 42.308 0.00 0.00 39.07 4.18
2815 3031 6.426937 TGCTGAGTACCAAACTGAATTAAGTC 59.573 38.462 0.00 0.00 39.07 3.01
2816 3032 6.204882 GTGCTGAGTACCAAACTGAATTAAGT 59.795 38.462 0.00 0.00 39.07 2.24
2821 3037 4.085357 TGTGCTGAGTACCAAACTGAAT 57.915 40.909 0.00 0.00 39.07 2.57
2910 3126 6.206395 TCTTTCTCAAAACATGTCAAAGCA 57.794 33.333 0.00 0.00 32.94 3.91
2936 3152 0.903454 AGGGACCAGGAACCAGTACG 60.903 60.000 0.00 0.00 0.00 3.67
2937 3153 0.903236 GAGGGACCAGGAACCAGTAC 59.097 60.000 0.00 0.00 0.00 2.73
2938 3154 0.790993 AGAGGGACCAGGAACCAGTA 59.209 55.000 0.00 0.00 0.00 2.74
2939 3155 0.104409 AAGAGGGACCAGGAACCAGT 60.104 55.000 0.00 0.00 0.00 4.00
2940 3156 1.068121 AAAGAGGGACCAGGAACCAG 58.932 55.000 0.00 0.00 0.00 4.00
2941 3157 0.771127 CAAAGAGGGACCAGGAACCA 59.229 55.000 0.00 0.00 0.00 3.67
2942 3158 0.609406 GCAAAGAGGGACCAGGAACC 60.609 60.000 0.00 0.00 0.00 3.62
2943 3159 0.609406 GGCAAAGAGGGACCAGGAAC 60.609 60.000 0.00 0.00 0.00 3.62
2945 3161 1.151810 AGGCAAAGAGGGACCAGGA 60.152 57.895 0.00 0.00 0.00 3.86
2946 3162 1.001641 CAGGCAAAGAGGGACCAGG 60.002 63.158 0.00 0.00 0.00 4.45
2947 3163 0.401738 TTCAGGCAAAGAGGGACCAG 59.598 55.000 0.00 0.00 0.00 4.00
2949 3165 3.366052 TTATTCAGGCAAAGAGGGACC 57.634 47.619 0.00 0.00 0.00 4.46
2987 3280 6.810911 AGCATCGAGTAATCAAGTTATCACT 58.189 36.000 0.00 0.00 33.11 3.41
3019 3312 9.703892 CTTTCCATATATGACCTAAGAGTTCAG 57.296 37.037 14.54 0.00 0.00 3.02
3045 3338 3.733443 AAACATTGGAACTGCTGGAAC 57.267 42.857 0.00 0.00 0.00 3.62
3046 3339 4.751767 AAAAACATTGGAACTGCTGGAA 57.248 36.364 0.00 0.00 0.00 3.53
3065 3358 8.871629 AATTATACATGTCTACCCACACAAAA 57.128 30.769 0.00 0.00 0.00 2.44
3083 3376 9.149225 CATGAAGAGGAGTATGCAGAATTATAC 57.851 37.037 0.00 0.00 0.00 1.47
3098 3391 4.221703 ACAGTTAGTCCACATGAAGAGGAG 59.778 45.833 0.00 0.00 37.69 3.69
3120 3413 9.736023 AGTTGAGACTGAATTTAACATTTGAAC 57.264 29.630 0.00 0.00 33.99 3.18
3154 3492 9.554053 GGGCATCCCTAGAAGTATATATCATAT 57.446 37.037 0.00 0.00 41.34 1.78
3166 3504 4.505742 GGTCTTATTGGGCATCCCTAGAAG 60.506 50.000 12.39 12.39 44.73 2.85
3167 3505 3.394606 GGTCTTATTGGGCATCCCTAGAA 59.605 47.826 3.27 0.00 45.70 2.10
3172 3510 1.494721 TGAGGTCTTATTGGGCATCCC 59.505 52.381 0.00 0.00 45.71 3.85
3180 3518 9.270640 CCTTTGAGATTATCTGAGGTCTTATTG 57.729 37.037 0.00 0.00 0.00 1.90
3199 3537 9.364989 TGAAAAACAATGAAGTTAACCTTTGAG 57.635 29.630 13.65 1.07 32.03 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.