Multiple sequence alignment - TraesCS2A01G093300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G093300 chr2A 100.000 2638 0 0 1 2638 47672281 47674918 0.000000e+00 4872.0
1 TraesCS2A01G093300 chr2A 94.964 278 13 1 485 762 146796920 146796644 4.030000e-118 435.0
2 TraesCS2A01G093300 chr2A 94.265 279 16 0 485 763 523328116 523328394 6.750000e-116 427.0
3 TraesCS2A01G093300 chr2A 97.561 123 2 1 1973 2095 47690300 47690421 2.660000e-50 209.0
4 TraesCS2A01G093300 chr2A 83.408 223 21 10 2 214 3450193 3450409 2.680000e-45 193.0
5 TraesCS2A01G093300 chr2D 87.293 905 47 17 879 1722 43963942 43964839 0.000000e+00 972.0
6 TraesCS2A01G093300 chr2D 93.648 488 20 5 874 1356 43951972 43952453 0.000000e+00 719.0
7 TraesCS2A01G093300 chr2D 85.441 522 33 19 1417 1925 43952532 43953023 1.090000e-138 503.0
8 TraesCS2A01G093300 chr2D 88.972 399 20 7 1708 2095 43966321 43966706 3.070000e-129 472.0
9 TraesCS2A01G093300 chr2D 82.784 546 72 9 2102 2638 605731286 605731818 3.980000e-128 468.0
10 TraesCS2A01G093300 chr2D 93.478 138 5 2 1958 2095 43953022 43953155 4.450000e-48 202.0
11 TraesCS2A01G093300 chr2D 82.938 211 19 11 2 200 5166595 5166800 9.710000e-40 174.0
12 TraesCS2A01G093300 chr3A 97.947 487 8 2 1 487 548051180 548051664 0.000000e+00 843.0
13 TraesCS2A01G093300 chr3A 91.367 278 20 2 2102 2375 264951893 264951616 6.890000e-101 377.0
14 TraesCS2A01G093300 chr3A 87.778 270 25 4 2373 2638 14800092 14800357 2.550000e-80 309.0
15 TraesCS2A01G093300 chr3A 76.986 365 49 22 1001 1358 65740247 65739911 2.700000e-40 176.0
16 TraesCS2A01G093300 chr3A 77.099 131 26 4 358 487 725879944 725879817 3.640000e-09 73.1
17 TraesCS2A01G093300 chr3A 80.208 96 18 1 358 452 365964360 365964455 1.310000e-08 71.3
18 TraesCS2A01G093300 chr7A 96.130 491 10 4 1 487 637319347 637318862 0.000000e+00 793.0
19 TraesCS2A01G093300 chr7A 95.683 278 12 0 485 762 14508067 14507790 5.180000e-122 448.0
20 TraesCS2A01G093300 chr7A 94.526 274 15 0 487 760 726392298 726392571 8.730000e-115 424.0
21 TraesCS2A01G093300 chr7A 88.000 75 6 3 760 832 347261963 347261890 4.680000e-13 86.1
22 TraesCS2A01G093300 chr2B 86.724 693 23 25 874 1515 68756467 68757141 0.000000e+00 706.0
23 TraesCS2A01G093300 chr2B 88.284 606 32 16 1527 2108 68757260 68757850 0.000000e+00 689.0
24 TraesCS2A01G093300 chr2B 90.667 525 24 10 834 1358 68585714 68585215 0.000000e+00 675.0
25 TraesCS2A01G093300 chr2B 85.088 684 47 30 1352 2000 68816655 68817318 0.000000e+00 647.0
26 TraesCS2A01G093300 chr2B 88.778 499 35 8 1 487 760146278 760146767 2.260000e-165 592.0
27 TraesCS2A01G093300 chr2B 85.813 578 38 22 1352 1893 68722799 68723368 8.190000e-160 573.0
28 TraesCS2A01G093300 chr2B 85.915 497 35 13 1417 1893 68585128 68584647 5.070000e-137 497.0
29 TraesCS2A01G093300 chr2B 94.245 278 16 0 487 764 134472970 134472693 2.430000e-115 425.0
30 TraesCS2A01G093300 chr2B 91.367 278 20 2 2102 2375 70772663 70772386 6.890000e-101 377.0
31 TraesCS2A01G093300 chr2B 91.561 237 11 3 1092 1325 68816246 68816476 4.240000e-83 318.0
32 TraesCS2A01G093300 chr2B 95.522 201 2 3 1159 1356 68722568 68722764 5.480000e-82 315.0
33 TraesCS2A01G093300 chr2B 90.498 221 18 2 874 1094 68792853 68793070 3.320000e-74 289.0
34 TraesCS2A01G093300 chr2B 84.066 182 18 9 2 172 6307792 6307611 5.840000e-37 165.0
35 TraesCS2A01G093300 chr2B 81.600 125 13 8 46 162 714134257 714134135 7.770000e-16 95.3
36 TraesCS2A01G093300 chr6B 90.224 491 39 3 4 487 364884100 364883612 1.330000e-177 632.0
37 TraesCS2A01G093300 chr6B 91.367 278 19 4 2102 2375 52453902 52454178 2.480000e-100 375.0
38 TraesCS2A01G093300 chr6B 94.203 69 4 0 760 828 364883614 364883546 3.590000e-19 106.0
39 TraesCS2A01G093300 chr5B 86.289 547 53 11 2101 2638 25325938 25325405 2.280000e-160 575.0
40 TraesCS2A01G093300 chr5B 83.540 565 65 16 2087 2638 412708384 412708933 1.090000e-138 503.0
41 TraesCS2A01G093300 chr5B 90.909 66 4 2 760 824 505714253 505714189 1.300000e-13 87.9
42 TraesCS2A01G093300 chr4A 87.375 499 42 8 1 487 628966743 628966254 1.070000e-153 553.0
43 TraesCS2A01G093300 chr4A 88.030 401 24 13 1705 2093 740861351 740861739 1.110000e-123 453.0
44 TraesCS2A01G093300 chr4A 94.624 279 15 0 484 762 468240640 468240918 1.450000e-117 433.0
45 TraesCS2A01G093300 chr4A 93.929 280 17 0 487 766 716768677 716768398 8.730000e-115 424.0
46 TraesCS2A01G093300 chr4A 90.604 149 12 2 1705 1852 742088668 742088815 2.070000e-46 196.0
47 TraesCS2A01G093300 chr6D 83.547 547 66 11 2102 2638 439908483 439907951 8.490000e-135 490.0
48 TraesCS2A01G093300 chr6D 82.967 546 71 9 2102 2638 232754497 232755029 8.550000e-130 473.0
49 TraesCS2A01G093300 chr7B 83.150 546 70 9 2102 2638 71587740 71587208 1.840000e-131 479.0
50 TraesCS2A01G093300 chr5A 94.604 278 14 1 484 760 618474381 618474658 1.880000e-116 429.0
51 TraesCS2A01G093300 chr4B 94.872 273 14 0 488 760 161619768 161619496 6.750000e-116 427.0
52 TraesCS2A01G093300 chr4B 89.796 49 5 0 208 256 258742128 258742176 2.190000e-06 63.9
53 TraesCS2A01G093300 chr5D 91.727 278 19 2 2102 2375 316087012 316086735 1.480000e-102 383.0
54 TraesCS2A01G093300 chr4D 91.727 278 19 2 2102 2375 451873995 451874272 1.480000e-102 383.0
55 TraesCS2A01G093300 chr1A 83.372 433 51 12 2216 2638 544726803 544726382 5.330000e-102 381.0
56 TraesCS2A01G093300 chr1A 91.367 278 20 2 2102 2375 121460236 121459959 6.890000e-101 377.0
57 TraesCS2A01G093300 chr3D 91.367 278 20 2 2102 2375 128744146 128743869 6.890000e-101 377.0
58 TraesCS2A01G093300 chr3D 91.007 278 21 3 2102 2375 583614057 583613780 3.210000e-99 372.0
59 TraesCS2A01G093300 chr3D 86.667 315 25 9 2330 2638 438458467 438458770 1.510000e-87 333.0
60 TraesCS2A01G093300 chr7D 82.282 412 37 16 17 411 597593499 597593891 9.110000e-85 324.0
61 TraesCS2A01G093300 chr7D 85.333 75 11 0 760 834 8992120 8992046 7.830000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G093300 chr2A 47672281 47674918 2637 False 4872.000000 4872 100.000000 1 2638 1 chr2A.!!$F2 2637
1 TraesCS2A01G093300 chr2D 43963942 43966706 2764 False 722.000000 972 88.132500 879 2095 2 chr2D.!!$F4 1216
2 TraesCS2A01G093300 chr2D 43951972 43953155 1183 False 474.666667 719 90.855667 874 2095 3 chr2D.!!$F3 1221
3 TraesCS2A01G093300 chr2D 605731286 605731818 532 False 468.000000 468 82.784000 2102 2638 1 chr2D.!!$F2 536
4 TraesCS2A01G093300 chr2B 68756467 68757850 1383 False 697.500000 706 87.504000 874 2108 2 chr2B.!!$F4 1234
5 TraesCS2A01G093300 chr2B 68584647 68585714 1067 True 586.000000 675 88.291000 834 1893 2 chr2B.!!$R5 1059
6 TraesCS2A01G093300 chr2B 68816246 68817318 1072 False 482.500000 647 88.324500 1092 2000 2 chr2B.!!$F5 908
7 TraesCS2A01G093300 chr2B 68722568 68723368 800 False 444.000000 573 90.667500 1159 1893 2 chr2B.!!$F3 734
8 TraesCS2A01G093300 chr6B 364883546 364884100 554 True 369.000000 632 92.213500 4 828 2 chr6B.!!$R1 824
9 TraesCS2A01G093300 chr5B 25325405 25325938 533 True 575.000000 575 86.289000 2101 2638 1 chr5B.!!$R1 537
10 TraesCS2A01G093300 chr5B 412708384 412708933 549 False 503.000000 503 83.540000 2087 2638 1 chr5B.!!$F1 551
11 TraesCS2A01G093300 chr6D 439907951 439908483 532 True 490.000000 490 83.547000 2102 2638 1 chr6D.!!$R1 536
12 TraesCS2A01G093300 chr6D 232754497 232755029 532 False 473.000000 473 82.967000 2102 2638 1 chr6D.!!$F1 536
13 TraesCS2A01G093300 chr7B 71587208 71587740 532 True 479.000000 479 83.150000 2102 2638 1 chr7B.!!$R1 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 370 0.249238 CTCTAGCACGATGGGCAGAC 60.249 60.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1701 2079 0.179023 TGCTGATCACTGGTGCAACA 60.179 50.0 3.4 3.4 39.98 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.237751 CGGCAAGGATTAGTCGCGG 61.238 63.158 6.13 0.00 0.00 6.46
62 63 2.982130 GTGGTGGCGGAGATGACT 59.018 61.111 0.00 0.00 0.00 3.41
64 65 2.105128 GGTGGCGGAGATGACTCG 59.895 66.667 0.00 0.00 43.44 4.18
87 88 2.227089 CTCGGGGTTCTTCCAGGACG 62.227 65.000 0.00 0.00 38.11 4.79
113 114 4.760047 CGGGACCCCTCGTGCTTG 62.760 72.222 4.46 0.00 32.37 4.01
129 130 3.755526 TTGATCAGGATGCCCGCCG 62.756 63.158 0.00 0.00 37.58 6.46
150 151 2.434359 GCAACGACTCCTTCCCCG 60.434 66.667 0.00 0.00 0.00 5.73
180 181 0.922626 GCCATCTTTCCCTTCCTCCT 59.077 55.000 0.00 0.00 0.00 3.69
188 189 2.756283 CCTTCCTCCTCCGCTCGT 60.756 66.667 0.00 0.00 0.00 4.18
211 212 3.633116 CGGTCCCTTCGGGTGGTT 61.633 66.667 0.00 0.00 44.74 3.67
212 213 2.033602 GGTCCCTTCGGGTGGTTG 59.966 66.667 0.00 0.00 44.74 3.77
213 214 2.033602 GTCCCTTCGGGTGGTTGG 59.966 66.667 0.00 0.00 44.74 3.77
214 215 3.961414 TCCCTTCGGGTGGTTGGC 61.961 66.667 0.00 0.00 44.74 4.52
215 216 3.966543 CCCTTCGGGTGGTTGGCT 61.967 66.667 0.00 0.00 38.25 4.75
216 217 2.359975 CCTTCGGGTGGTTGGCTC 60.360 66.667 0.00 0.00 0.00 4.70
217 218 2.359975 CTTCGGGTGGTTGGCTCC 60.360 66.667 0.00 0.00 0.00 4.70
218 219 3.920093 CTTCGGGTGGTTGGCTCCC 62.920 68.421 0.00 0.00 37.98 4.30
221 222 3.590574 GGGTGGTTGGCTCCCCTT 61.591 66.667 0.00 0.00 35.52 3.95
222 223 2.035783 GGTGGTTGGCTCCCCTTC 59.964 66.667 0.00 0.00 0.00 3.46
223 224 2.359975 GTGGTTGGCTCCCCTTCG 60.360 66.667 0.00 0.00 0.00 3.79
224 225 4.344865 TGGTTGGCTCCCCTTCGC 62.345 66.667 0.00 0.00 0.00 4.70
225 226 4.035102 GGTTGGCTCCCCTTCGCT 62.035 66.667 0.00 0.00 0.00 4.93
226 227 2.666098 GGTTGGCTCCCCTTCGCTA 61.666 63.158 0.00 0.00 0.00 4.26
227 228 1.153349 GTTGGCTCCCCTTCGCTAG 60.153 63.158 0.00 0.00 0.00 3.42
228 229 3.031417 TTGGCTCCCCTTCGCTAGC 62.031 63.158 4.06 4.06 0.00 3.42
229 230 4.593864 GGCTCCCCTTCGCTAGCG 62.594 72.222 30.91 30.91 41.35 4.26
231 232 4.593864 CTCCCCTTCGCTAGCGCC 62.594 72.222 31.82 0.00 39.59 6.53
234 235 4.241555 CCCTTCGCTAGCGCCCAT 62.242 66.667 31.82 0.00 39.59 4.00
235 236 2.969238 CCTTCGCTAGCGCCCATG 60.969 66.667 31.82 16.33 39.59 3.66
236 237 2.969238 CTTCGCTAGCGCCCATGG 60.969 66.667 31.82 4.14 39.59 3.66
237 238 4.545706 TTCGCTAGCGCCCATGGG 62.546 66.667 31.82 27.87 39.59 4.00
247 248 2.599597 CCCATGGGGCAGAAGAGG 59.400 66.667 24.53 0.00 35.35 3.69
248 249 2.002977 CCCATGGGGCAGAAGAGGA 61.003 63.158 24.53 0.00 35.35 3.71
249 250 1.530771 CCATGGGGCAGAAGAGGAG 59.469 63.158 2.85 0.00 0.00 3.69
250 251 1.530771 CATGGGGCAGAAGAGGAGG 59.469 63.158 0.00 0.00 0.00 4.30
251 252 0.984961 CATGGGGCAGAAGAGGAGGA 60.985 60.000 0.00 0.00 0.00 3.71
252 253 0.693767 ATGGGGCAGAAGAGGAGGAG 60.694 60.000 0.00 0.00 0.00 3.69
253 254 1.306568 GGGGCAGAAGAGGAGGAGT 60.307 63.158 0.00 0.00 0.00 3.85
254 255 1.621672 GGGGCAGAAGAGGAGGAGTG 61.622 65.000 0.00 0.00 0.00 3.51
255 256 1.621672 GGGCAGAAGAGGAGGAGTGG 61.622 65.000 0.00 0.00 0.00 4.00
256 257 0.907230 GGCAGAAGAGGAGGAGTGGT 60.907 60.000 0.00 0.00 0.00 4.16
257 258 1.619977 GGCAGAAGAGGAGGAGTGGTA 60.620 57.143 0.00 0.00 0.00 3.25
258 259 1.754226 GCAGAAGAGGAGGAGTGGTAG 59.246 57.143 0.00 0.00 0.00 3.18
259 260 2.383855 CAGAAGAGGAGGAGTGGTAGG 58.616 57.143 0.00 0.00 0.00 3.18
260 261 1.116308 GAAGAGGAGGAGTGGTAGGC 58.884 60.000 0.00 0.00 0.00 3.93
261 262 0.325765 AAGAGGAGGAGTGGTAGGCC 60.326 60.000 0.00 0.00 0.00 5.19
262 263 2.042843 AGGAGGAGTGGTAGGCCG 60.043 66.667 0.00 0.00 37.67 6.13
263 264 3.155167 GGAGGAGTGGTAGGCCGG 61.155 72.222 0.00 0.00 37.67 6.13
264 265 3.851128 GAGGAGTGGTAGGCCGGC 61.851 72.222 21.18 21.18 37.67 6.13
267 268 3.537874 GAGTGGTAGGCCGGCGAT 61.538 66.667 22.54 14.64 37.67 4.58
268 269 3.792053 GAGTGGTAGGCCGGCGATG 62.792 68.421 22.54 0.00 37.67 3.84
269 270 4.910585 GTGGTAGGCCGGCGATGG 62.911 72.222 22.54 0.00 37.67 3.51
279 280 4.285291 GGCGATGGCGATTTTTCG 57.715 55.556 0.00 0.00 41.24 3.46
280 281 1.298339 GGCGATGGCGATTTTTCGG 60.298 57.895 0.00 0.00 41.24 4.30
281 282 1.298339 GCGATGGCGATTTTTCGGG 60.298 57.895 0.00 0.00 40.82 5.14
282 283 1.711060 GCGATGGCGATTTTTCGGGA 61.711 55.000 0.00 0.00 40.82 5.14
283 284 0.304705 CGATGGCGATTTTTCGGGAG 59.695 55.000 0.00 0.00 40.82 4.30
284 285 1.663695 GATGGCGATTTTTCGGGAGA 58.336 50.000 0.00 0.00 0.00 3.71
285 286 1.599542 GATGGCGATTTTTCGGGAGAG 59.400 52.381 0.00 0.00 41.75 3.20
286 287 0.611200 TGGCGATTTTTCGGGAGAGA 59.389 50.000 0.00 0.00 41.75 3.10
287 288 1.291132 GGCGATTTTTCGGGAGAGAG 58.709 55.000 0.00 0.00 41.75 3.20
288 289 1.134788 GGCGATTTTTCGGGAGAGAGA 60.135 52.381 0.00 0.00 41.75 3.10
289 290 2.483889 GGCGATTTTTCGGGAGAGAGAT 60.484 50.000 0.00 0.00 41.75 2.75
290 291 3.198872 GCGATTTTTCGGGAGAGAGATT 58.801 45.455 0.00 0.00 41.75 2.40
291 292 3.001736 GCGATTTTTCGGGAGAGAGATTG 59.998 47.826 0.00 0.00 41.75 2.67
292 293 3.557595 CGATTTTTCGGGAGAGAGATTGG 59.442 47.826 0.00 0.00 41.75 3.16
293 294 4.680708 CGATTTTTCGGGAGAGAGATTGGA 60.681 45.833 0.00 0.00 41.75 3.53
294 295 4.844349 TTTTTCGGGAGAGAGATTGGAT 57.156 40.909 0.00 0.00 41.75 3.41
295 296 4.408182 TTTTCGGGAGAGAGATTGGATC 57.592 45.455 0.00 0.00 41.75 3.36
296 297 1.610363 TCGGGAGAGAGATTGGATCG 58.390 55.000 0.00 0.00 0.00 3.69
297 298 0.600557 CGGGAGAGAGATTGGATCGG 59.399 60.000 0.00 0.00 0.00 4.18
298 299 0.972883 GGGAGAGAGATTGGATCGGG 59.027 60.000 0.00 0.00 0.00 5.14
299 300 0.972883 GGAGAGAGATTGGATCGGGG 59.027 60.000 0.00 0.00 0.00 5.73
300 301 1.481428 GGAGAGAGATTGGATCGGGGA 60.481 57.143 0.00 0.00 0.00 4.81
301 302 1.892474 GAGAGAGATTGGATCGGGGAG 59.108 57.143 0.00 0.00 0.00 4.30
302 303 1.501170 AGAGAGATTGGATCGGGGAGA 59.499 52.381 0.00 0.00 0.00 3.71
303 304 1.892474 GAGAGATTGGATCGGGGAGAG 59.108 57.143 0.00 0.00 0.00 3.20
304 305 0.972883 GAGATTGGATCGGGGAGAGG 59.027 60.000 0.00 0.00 0.00 3.69
305 306 0.472734 AGATTGGATCGGGGAGAGGG 60.473 60.000 0.00 0.00 0.00 4.30
306 307 2.118233 GATTGGATCGGGGAGAGGGC 62.118 65.000 0.00 0.00 0.00 5.19
307 308 2.628187 ATTGGATCGGGGAGAGGGCT 62.628 60.000 0.00 0.00 0.00 5.19
308 309 3.237741 GGATCGGGGAGAGGGCTG 61.238 72.222 0.00 0.00 0.00 4.85
309 310 2.123251 GATCGGGGAGAGGGCTGA 60.123 66.667 0.00 0.00 0.00 4.26
310 311 2.123077 ATCGGGGAGAGGGCTGAG 60.123 66.667 0.00 0.00 0.00 3.35
311 312 3.765257 ATCGGGGAGAGGGCTGAGG 62.765 68.421 0.00 0.00 0.00 3.86
312 313 4.787280 CGGGGAGAGGGCTGAGGT 62.787 72.222 0.00 0.00 0.00 3.85
313 314 2.696893 GGGGAGAGGGCTGAGGTA 59.303 66.667 0.00 0.00 0.00 3.08
314 315 1.003051 GGGGAGAGGGCTGAGGTAA 59.997 63.158 0.00 0.00 0.00 2.85
315 316 0.400670 GGGGAGAGGGCTGAGGTAAT 60.401 60.000 0.00 0.00 0.00 1.89
316 317 0.761802 GGGAGAGGGCTGAGGTAATG 59.238 60.000 0.00 0.00 0.00 1.90
317 318 0.761802 GGAGAGGGCTGAGGTAATGG 59.238 60.000 0.00 0.00 0.00 3.16
318 319 0.761802 GAGAGGGCTGAGGTAATGGG 59.238 60.000 0.00 0.00 0.00 4.00
319 320 0.695803 AGAGGGCTGAGGTAATGGGG 60.696 60.000 0.00 0.00 0.00 4.96
320 321 1.697754 AGGGCTGAGGTAATGGGGG 60.698 63.158 0.00 0.00 0.00 5.40
321 322 2.195956 GGCTGAGGTAATGGGGGC 59.804 66.667 0.00 0.00 0.00 5.80
322 323 2.203209 GCTGAGGTAATGGGGGCG 60.203 66.667 0.00 0.00 0.00 6.13
323 324 2.510906 CTGAGGTAATGGGGGCGG 59.489 66.667 0.00 0.00 0.00 6.13
324 325 3.093835 TGAGGTAATGGGGGCGGG 61.094 66.667 0.00 0.00 0.00 6.13
325 326 3.886001 GAGGTAATGGGGGCGGGG 61.886 72.222 0.00 0.00 0.00 5.73
344 345 4.753662 CTCGAGGACCGGGGGACA 62.754 72.222 6.32 0.00 39.14 4.02
354 355 2.043248 GGGGGACACGGAGCTCTA 60.043 66.667 14.64 0.00 0.00 2.43
355 356 2.128507 GGGGGACACGGAGCTCTAG 61.129 68.421 14.64 10.78 0.00 2.43
356 357 2.787567 GGGGACACGGAGCTCTAGC 61.788 68.421 14.64 0.00 42.49 3.42
357 358 2.052690 GGGACACGGAGCTCTAGCA 61.053 63.158 14.64 0.00 45.16 3.49
358 359 1.139947 GGACACGGAGCTCTAGCAC 59.860 63.158 14.64 3.16 45.16 4.40
359 360 1.226435 GACACGGAGCTCTAGCACG 60.226 63.158 14.64 10.69 45.16 5.34
360 361 1.645704 GACACGGAGCTCTAGCACGA 61.646 60.000 20.71 0.00 45.16 4.35
361 362 1.032657 ACACGGAGCTCTAGCACGAT 61.033 55.000 20.71 9.29 45.16 3.73
362 363 0.593518 CACGGAGCTCTAGCACGATG 60.594 60.000 20.71 13.13 45.16 3.84
363 364 1.007964 CGGAGCTCTAGCACGATGG 60.008 63.158 14.64 0.00 45.16 3.51
364 365 1.365633 GGAGCTCTAGCACGATGGG 59.634 63.158 14.64 0.00 45.16 4.00
365 366 1.300542 GAGCTCTAGCACGATGGGC 60.301 63.158 6.43 0.00 45.16 5.36
366 367 2.021068 GAGCTCTAGCACGATGGGCA 62.021 60.000 6.43 0.00 45.16 5.36
367 368 1.593750 GCTCTAGCACGATGGGCAG 60.594 63.158 0.00 0.00 41.59 4.85
368 369 2.021068 GCTCTAGCACGATGGGCAGA 62.021 60.000 0.00 0.00 41.59 4.26
369 370 0.249238 CTCTAGCACGATGGGCAGAC 60.249 60.000 0.00 0.00 0.00 3.51
370 371 1.227380 CTAGCACGATGGGCAGACC 60.227 63.158 0.00 0.00 40.81 3.85
392 393 4.680237 CGTCTGCCGGCAGGACAA 62.680 66.667 46.58 30.55 43.75 3.18
393 394 2.045926 GTCTGCCGGCAGGACAAT 60.046 61.111 46.58 0.00 43.75 2.71
394 395 1.675641 GTCTGCCGGCAGGACAATT 60.676 57.895 46.58 0.00 43.75 2.32
395 396 0.392461 GTCTGCCGGCAGGACAATTA 60.392 55.000 46.58 28.76 43.75 1.40
396 397 0.326595 TCTGCCGGCAGGACAATTAA 59.673 50.000 46.58 28.04 43.75 1.40
397 398 1.064758 TCTGCCGGCAGGACAATTAAT 60.065 47.619 46.58 0.00 43.75 1.40
398 399 1.334869 CTGCCGGCAGGACAATTAATC 59.665 52.381 42.81 3.58 41.02 1.75
399 400 1.064758 TGCCGGCAGGACAATTAATCT 60.065 47.619 29.03 0.00 41.02 2.40
400 401 1.334869 GCCGGCAGGACAATTAATCTG 59.665 52.381 24.80 0.00 41.02 2.90
401 402 2.917933 CCGGCAGGACAATTAATCTGA 58.082 47.619 0.00 0.00 41.02 3.27
402 403 2.874701 CCGGCAGGACAATTAATCTGAG 59.125 50.000 0.00 0.56 41.02 3.35
403 404 2.289002 CGGCAGGACAATTAATCTGAGC 59.711 50.000 6.16 0.00 0.00 4.26
404 405 2.620585 GGCAGGACAATTAATCTGAGCC 59.379 50.000 6.16 4.13 0.00 4.70
405 406 3.282021 GCAGGACAATTAATCTGAGCCA 58.718 45.455 6.16 0.00 0.00 4.75
406 407 3.887716 GCAGGACAATTAATCTGAGCCAT 59.112 43.478 6.16 0.00 0.00 4.40
407 408 4.340381 GCAGGACAATTAATCTGAGCCATT 59.660 41.667 6.16 0.00 0.00 3.16
408 409 5.735354 GCAGGACAATTAATCTGAGCCATTG 60.735 44.000 6.16 4.71 0.00 2.82
409 410 5.591472 CAGGACAATTAATCTGAGCCATTGA 59.409 40.000 10.68 0.00 0.00 2.57
410 411 6.264744 CAGGACAATTAATCTGAGCCATTGAT 59.735 38.462 10.68 0.00 0.00 2.57
411 412 6.837568 AGGACAATTAATCTGAGCCATTGATT 59.162 34.615 10.68 0.00 35.08 2.57
412 413 7.343833 AGGACAATTAATCTGAGCCATTGATTT 59.656 33.333 10.68 0.00 33.24 2.17
413 414 7.437267 GGACAATTAATCTGAGCCATTGATTTG 59.563 37.037 10.68 0.00 33.24 2.32
414 415 7.270047 ACAATTAATCTGAGCCATTGATTTGG 58.730 34.615 10.68 0.00 39.94 3.28
415 416 5.857471 TTAATCTGAGCCATTGATTTGGG 57.143 39.130 0.00 0.00 37.24 4.12
420 421 1.350071 AGCCATTGATTTGGGTTGCA 58.650 45.000 0.00 0.00 44.96 4.08
421 422 1.276989 AGCCATTGATTTGGGTTGCAG 59.723 47.619 0.00 0.00 44.96 4.41
422 423 1.275856 GCCATTGATTTGGGTTGCAGA 59.724 47.619 0.00 0.00 37.24 4.26
423 424 2.289569 GCCATTGATTTGGGTTGCAGAA 60.290 45.455 0.00 0.00 37.24 3.02
424 425 3.620472 GCCATTGATTTGGGTTGCAGAAT 60.620 43.478 0.00 0.00 37.24 2.40
425 426 4.382901 GCCATTGATTTGGGTTGCAGAATA 60.383 41.667 0.00 0.00 37.24 1.75
426 427 5.685599 GCCATTGATTTGGGTTGCAGAATAT 60.686 40.000 0.00 0.00 37.24 1.28
427 428 6.350906 CCATTGATTTGGGTTGCAGAATATT 58.649 36.000 0.00 0.00 32.80 1.28
428 429 6.259167 CCATTGATTTGGGTTGCAGAATATTG 59.741 38.462 0.00 0.00 32.80 1.90
429 430 6.602410 TTGATTTGGGTTGCAGAATATTGA 57.398 33.333 0.00 0.00 0.00 2.57
430 431 6.795144 TGATTTGGGTTGCAGAATATTGAT 57.205 33.333 0.00 0.00 0.00 2.57
431 432 6.575267 TGATTTGGGTTGCAGAATATTGATG 58.425 36.000 0.00 0.00 0.00 3.07
432 433 5.999205 TTTGGGTTGCAGAATATTGATGT 57.001 34.783 0.00 0.00 0.00 3.06
433 434 7.341512 TGATTTGGGTTGCAGAATATTGATGTA 59.658 33.333 0.00 0.00 0.00 2.29
434 435 7.473735 TTTGGGTTGCAGAATATTGATGTAA 57.526 32.000 0.00 0.00 0.00 2.41
435 436 7.658525 TTGGGTTGCAGAATATTGATGTAAT 57.341 32.000 0.00 0.00 0.00 1.89
436 437 8.759481 TTGGGTTGCAGAATATTGATGTAATA 57.241 30.769 0.00 0.00 35.79 0.98
437 438 8.938801 TGGGTTGCAGAATATTGATGTAATAT 57.061 30.769 0.00 0.00 42.41 1.28
438 439 8.795513 TGGGTTGCAGAATATTGATGTAATATG 58.204 33.333 0.00 0.00 40.29 1.78
439 440 8.246180 GGGTTGCAGAATATTGATGTAATATGG 58.754 37.037 0.00 0.00 40.29 2.74
440 441 9.013229 GGTTGCAGAATATTGATGTAATATGGA 57.987 33.333 0.00 0.00 40.29 3.41
441 442 9.831737 GTTGCAGAATATTGATGTAATATGGAC 57.168 33.333 0.00 0.00 40.29 4.02
442 443 9.571816 TTGCAGAATATTGATGTAATATGGACA 57.428 29.630 0.00 0.00 40.29 4.02
443 444 9.223099 TGCAGAATATTGATGTAATATGGACAG 57.777 33.333 0.00 0.00 40.29 3.51
444 445 9.224267 GCAGAATATTGATGTAATATGGACAGT 57.776 33.333 0.00 0.00 40.29 3.55
451 452 7.855784 TGATGTAATATGGACAGTAGGATGT 57.144 36.000 0.00 0.00 35.68 3.06
452 453 8.950007 TGATGTAATATGGACAGTAGGATGTA 57.050 34.615 0.00 0.00 32.25 2.29
453 454 9.547279 TGATGTAATATGGACAGTAGGATGTAT 57.453 33.333 0.00 0.00 32.25 2.29
481 482 8.857694 TTAACTTAATTTGATCGAAAGGTCCT 57.142 30.769 0.00 0.00 41.73 3.85
482 483 6.743575 ACTTAATTTGATCGAAAGGTCCTG 57.256 37.500 0.00 0.00 41.73 3.86
483 484 5.648092 ACTTAATTTGATCGAAAGGTCCTGG 59.352 40.000 0.00 0.00 41.73 4.45
484 485 3.721087 ATTTGATCGAAAGGTCCTGGT 57.279 42.857 0.00 0.00 41.73 4.00
485 486 3.502123 TTTGATCGAAAGGTCCTGGTT 57.498 42.857 0.00 0.00 41.73 3.67
486 487 4.627284 TTTGATCGAAAGGTCCTGGTTA 57.373 40.909 0.00 0.00 41.73 2.85
487 488 3.887621 TGATCGAAAGGTCCTGGTTAG 57.112 47.619 0.00 0.00 41.73 2.34
488 489 2.500098 TGATCGAAAGGTCCTGGTTAGG 59.500 50.000 0.00 0.00 41.73 2.69
489 490 1.272807 TCGAAAGGTCCTGGTTAGGG 58.727 55.000 0.00 0.00 44.70 3.53
499 500 4.974645 TCCTGGTTAGGGCATATACAAG 57.025 45.455 0.00 0.00 44.70 3.16
500 501 3.650942 TCCTGGTTAGGGCATATACAAGG 59.349 47.826 7.97 7.97 44.70 3.61
501 502 3.244911 CCTGGTTAGGGCATATACAAGGG 60.245 52.174 6.90 0.00 40.63 3.95
502 503 3.394606 CTGGTTAGGGCATATACAAGGGT 59.605 47.826 0.00 0.00 0.00 4.34
503 504 3.789274 TGGTTAGGGCATATACAAGGGTT 59.211 43.478 0.00 0.00 0.00 4.11
504 505 4.142038 GGTTAGGGCATATACAAGGGTTG 58.858 47.826 0.00 0.00 0.00 3.77
505 506 4.141344 GGTTAGGGCATATACAAGGGTTGA 60.141 45.833 0.00 0.00 0.00 3.18
506 507 5.457633 GGTTAGGGCATATACAAGGGTTGAT 60.458 44.000 0.00 0.00 0.00 2.57
507 508 6.240060 GGTTAGGGCATATACAAGGGTTGATA 60.240 42.308 0.00 0.00 0.00 2.15
508 509 5.922960 AGGGCATATACAAGGGTTGATAA 57.077 39.130 0.00 0.00 0.00 1.75
509 510 5.880901 AGGGCATATACAAGGGTTGATAAG 58.119 41.667 0.00 0.00 0.00 1.73
510 511 5.610982 AGGGCATATACAAGGGTTGATAAGA 59.389 40.000 0.00 0.00 0.00 2.10
511 512 6.275618 AGGGCATATACAAGGGTTGATAAGAT 59.724 38.462 0.00 0.00 0.00 2.40
512 513 7.461043 AGGGCATATACAAGGGTTGATAAGATA 59.539 37.037 0.00 0.00 0.00 1.98
513 514 7.770897 GGGCATATACAAGGGTTGATAAGATAG 59.229 40.741 0.00 0.00 0.00 2.08
514 515 8.322091 GGCATATACAAGGGTTGATAAGATAGT 58.678 37.037 0.00 0.00 0.00 2.12
515 516 9.372369 GCATATACAAGGGTTGATAAGATAGTC 57.628 37.037 0.00 0.00 0.00 2.59
575 576 6.916360 AAAAACATGTCTACAATGGGTCAT 57.084 33.333 0.00 0.00 0.00 3.06
576 577 6.515272 AAAACATGTCTACAATGGGTCATC 57.485 37.500 0.00 0.00 0.00 2.92
577 578 5.441718 AACATGTCTACAATGGGTCATCT 57.558 39.130 0.00 0.00 0.00 2.90
578 579 6.560003 AACATGTCTACAATGGGTCATCTA 57.440 37.500 0.00 0.00 0.00 1.98
579 580 6.753913 ACATGTCTACAATGGGTCATCTAT 57.246 37.500 0.00 0.00 0.00 1.98
580 581 7.141758 ACATGTCTACAATGGGTCATCTATT 57.858 36.000 0.00 0.00 0.00 1.73
581 582 8.262601 ACATGTCTACAATGGGTCATCTATTA 57.737 34.615 0.00 0.00 0.00 0.98
582 583 8.370940 ACATGTCTACAATGGGTCATCTATTAG 58.629 37.037 0.00 0.00 0.00 1.73
583 584 6.759272 TGTCTACAATGGGTCATCTATTAGC 58.241 40.000 0.00 0.00 0.00 3.09
584 585 6.554982 TGTCTACAATGGGTCATCTATTAGCT 59.445 38.462 0.00 0.00 0.00 3.32
585 586 7.071196 TGTCTACAATGGGTCATCTATTAGCTT 59.929 37.037 0.00 0.00 0.00 3.74
586 587 7.934120 GTCTACAATGGGTCATCTATTAGCTTT 59.066 37.037 0.00 0.00 0.00 3.51
587 588 9.154632 TCTACAATGGGTCATCTATTAGCTTTA 57.845 33.333 0.00 0.00 0.00 1.85
588 589 9.950496 CTACAATGGGTCATCTATTAGCTTTAT 57.050 33.333 0.00 0.00 0.00 1.40
589 590 8.854614 ACAATGGGTCATCTATTAGCTTTATC 57.145 34.615 0.00 0.00 0.00 1.75
590 591 8.664079 ACAATGGGTCATCTATTAGCTTTATCT 58.336 33.333 0.00 0.00 0.00 1.98
591 592 9.512588 CAATGGGTCATCTATTAGCTTTATCTT 57.487 33.333 0.00 0.00 0.00 2.40
592 593 9.732130 AATGGGTCATCTATTAGCTTTATCTTC 57.268 33.333 0.00 0.00 0.00 2.87
593 594 8.262601 TGGGTCATCTATTAGCTTTATCTTCA 57.737 34.615 0.00 0.00 0.00 3.02
594 595 8.713971 TGGGTCATCTATTAGCTTTATCTTCAA 58.286 33.333 0.00 0.00 0.00 2.69
595 596 9.732130 GGGTCATCTATTAGCTTTATCTTCAAT 57.268 33.333 0.00 0.00 0.00 2.57
625 626 8.336801 AGTTGTTCCTAAAAATATGGTGAGAC 57.663 34.615 0.00 0.00 0.00 3.36
626 627 7.942341 AGTTGTTCCTAAAAATATGGTGAGACA 59.058 33.333 0.00 0.00 0.00 3.41
627 628 8.573035 GTTGTTCCTAAAAATATGGTGAGACAA 58.427 33.333 0.00 0.00 0.00 3.18
628 629 8.698973 TGTTCCTAAAAATATGGTGAGACAAA 57.301 30.769 0.00 0.00 0.00 2.83
629 630 9.308000 TGTTCCTAAAAATATGGTGAGACAAAT 57.692 29.630 0.00 0.00 0.00 2.32
632 633 9.308000 TCCTAAAAATATGGTGAGACAAATTGT 57.692 29.630 0.00 0.00 0.00 2.71
633 634 9.357652 CCTAAAAATATGGTGAGACAAATTGTG 57.642 33.333 2.20 0.00 0.00 3.33
634 635 7.656707 AAAAATATGGTGAGACAAATTGTGC 57.343 32.000 2.20 0.00 0.00 4.57
635 636 6.594788 AAATATGGTGAGACAAATTGTGCT 57.405 33.333 2.20 0.36 0.00 4.40
636 637 7.701539 AAATATGGTGAGACAAATTGTGCTA 57.298 32.000 2.20 0.00 0.00 3.49
637 638 7.701539 AATATGGTGAGACAAATTGTGCTAA 57.298 32.000 2.20 0.00 0.00 3.09
638 639 5.633830 ATGGTGAGACAAATTGTGCTAAG 57.366 39.130 2.20 0.00 0.00 2.18
639 640 4.713553 TGGTGAGACAAATTGTGCTAAGA 58.286 39.130 2.20 0.00 0.00 2.10
640 641 4.756642 TGGTGAGACAAATTGTGCTAAGAG 59.243 41.667 2.20 0.00 0.00 2.85
641 642 4.997395 GGTGAGACAAATTGTGCTAAGAGA 59.003 41.667 2.20 0.00 0.00 3.10
642 643 5.645497 GGTGAGACAAATTGTGCTAAGAGAT 59.355 40.000 2.20 0.00 0.00 2.75
643 644 6.183360 GGTGAGACAAATTGTGCTAAGAGATC 60.183 42.308 2.20 0.00 0.00 2.75
644 645 6.369890 GTGAGACAAATTGTGCTAAGAGATCA 59.630 38.462 2.20 0.00 0.00 2.92
645 646 7.065563 GTGAGACAAATTGTGCTAAGAGATCAT 59.934 37.037 2.20 0.00 0.00 2.45
646 647 7.279536 TGAGACAAATTGTGCTAAGAGATCATC 59.720 37.037 2.20 0.00 0.00 2.92
647 648 7.337167 AGACAAATTGTGCTAAGAGATCATCT 58.663 34.615 2.20 0.00 41.27 2.90
648 649 7.495279 AGACAAATTGTGCTAAGAGATCATCTC 59.505 37.037 6.55 6.55 43.70 2.75
678 679 9.209175 TCTTCTCTTAAATAAGACAAGACAAGC 57.791 33.333 13.55 0.00 40.21 4.01
679 680 7.907214 TCTCTTAAATAAGACAAGACAAGCC 57.093 36.000 0.00 0.00 37.40 4.35
680 681 7.680730 TCTCTTAAATAAGACAAGACAAGCCT 58.319 34.615 0.00 0.00 37.40 4.58
681 682 8.157476 TCTCTTAAATAAGACAAGACAAGCCTT 58.843 33.333 0.00 0.00 37.40 4.35
682 683 8.324163 TCTTAAATAAGACAAGACAAGCCTTC 57.676 34.615 0.00 0.00 37.40 3.46
683 684 8.157476 TCTTAAATAAGACAAGACAAGCCTTCT 58.843 33.333 0.00 0.00 37.40 2.85
684 685 6.809630 AAATAAGACAAGACAAGCCTTCTC 57.190 37.500 0.00 0.00 0.00 2.87
685 686 5.753721 ATAAGACAAGACAAGCCTTCTCT 57.246 39.130 0.00 0.00 0.00 3.10
686 687 4.429854 AAGACAAGACAAGCCTTCTCTT 57.570 40.909 0.00 0.00 30.15 2.85
687 688 5.552870 AAGACAAGACAAGCCTTCTCTTA 57.447 39.130 0.00 0.00 32.25 2.10
688 689 5.753721 AGACAAGACAAGCCTTCTCTTAT 57.246 39.130 0.00 0.00 0.00 1.73
689 690 5.486526 AGACAAGACAAGCCTTCTCTTATG 58.513 41.667 0.00 0.00 0.00 1.90
690 691 5.247110 AGACAAGACAAGCCTTCTCTTATGA 59.753 40.000 0.00 0.00 0.00 2.15
691 692 6.059787 ACAAGACAAGCCTTCTCTTATGAT 57.940 37.500 0.00 0.00 0.00 2.45
692 693 6.479884 ACAAGACAAGCCTTCTCTTATGATT 58.520 36.000 0.00 0.00 0.00 2.57
693 694 6.944862 ACAAGACAAGCCTTCTCTTATGATTT 59.055 34.615 0.00 0.00 0.00 2.17
694 695 6.998968 AGACAAGCCTTCTCTTATGATTTG 57.001 37.500 0.00 0.00 0.00 2.32
695 696 6.479884 AGACAAGCCTTCTCTTATGATTTGT 58.520 36.000 0.00 0.00 0.00 2.83
696 697 6.597280 AGACAAGCCTTCTCTTATGATTTGTC 59.403 38.462 5.63 5.63 41.10 3.18
697 698 6.479884 ACAAGCCTTCTCTTATGATTTGTCT 58.520 36.000 0.00 0.00 0.00 3.41
698 699 6.597280 ACAAGCCTTCTCTTATGATTTGTCTC 59.403 38.462 0.00 0.00 0.00 3.36
699 700 6.558488 AGCCTTCTCTTATGATTTGTCTCT 57.442 37.500 0.00 0.00 0.00 3.10
700 701 6.581712 AGCCTTCTCTTATGATTTGTCTCTC 58.418 40.000 0.00 0.00 0.00 3.20
701 702 5.757808 GCCTTCTCTTATGATTTGTCTCTCC 59.242 44.000 0.00 0.00 0.00 3.71
702 703 6.407979 GCCTTCTCTTATGATTTGTCTCTCCT 60.408 42.308 0.00 0.00 0.00 3.69
703 704 7.209475 CCTTCTCTTATGATTTGTCTCTCCTC 58.791 42.308 0.00 0.00 0.00 3.71
704 705 6.723298 TCTCTTATGATTTGTCTCTCCTCC 57.277 41.667 0.00 0.00 0.00 4.30
705 706 6.197903 TCTCTTATGATTTGTCTCTCCTCCA 58.802 40.000 0.00 0.00 0.00 3.86
706 707 6.097554 TCTCTTATGATTTGTCTCTCCTCCAC 59.902 42.308 0.00 0.00 0.00 4.02
707 708 3.922171 ATGATTTGTCTCTCCTCCACC 57.078 47.619 0.00 0.00 0.00 4.61
708 709 2.907892 TGATTTGTCTCTCCTCCACCT 58.092 47.619 0.00 0.00 0.00 4.00
709 710 2.834549 TGATTTGTCTCTCCTCCACCTC 59.165 50.000 0.00 0.00 0.00 3.85
710 711 2.398754 TTTGTCTCTCCTCCACCTCA 57.601 50.000 0.00 0.00 0.00 3.86
711 712 2.630889 TTGTCTCTCCTCCACCTCAT 57.369 50.000 0.00 0.00 0.00 2.90
712 713 2.151502 TGTCTCTCCTCCACCTCATC 57.848 55.000 0.00 0.00 0.00 2.92
713 714 1.359130 TGTCTCTCCTCCACCTCATCA 59.641 52.381 0.00 0.00 0.00 3.07
714 715 2.023598 TGTCTCTCCTCCACCTCATCAT 60.024 50.000 0.00 0.00 0.00 2.45
715 716 3.037549 GTCTCTCCTCCACCTCATCATT 58.962 50.000 0.00 0.00 0.00 2.57
716 717 3.454082 GTCTCTCCTCCACCTCATCATTT 59.546 47.826 0.00 0.00 0.00 2.32
717 718 4.651503 GTCTCTCCTCCACCTCATCATTTA 59.348 45.833 0.00 0.00 0.00 1.40
718 719 5.306678 GTCTCTCCTCCACCTCATCATTTAT 59.693 44.000 0.00 0.00 0.00 1.40
719 720 5.541868 TCTCTCCTCCACCTCATCATTTATC 59.458 44.000 0.00 0.00 0.00 1.75
720 721 5.471424 TCTCCTCCACCTCATCATTTATCT 58.529 41.667 0.00 0.00 0.00 1.98
721 722 5.907662 TCTCCTCCACCTCATCATTTATCTT 59.092 40.000 0.00 0.00 0.00 2.40
722 723 7.075797 TCTCCTCCACCTCATCATTTATCTTA 58.924 38.462 0.00 0.00 0.00 2.10
723 724 7.015682 TCTCCTCCACCTCATCATTTATCTTAC 59.984 40.741 0.00 0.00 0.00 2.34
724 725 5.928839 CCTCCACCTCATCATTTATCTTACG 59.071 44.000 0.00 0.00 0.00 3.18
725 726 6.463049 CCTCCACCTCATCATTTATCTTACGT 60.463 42.308 0.00 0.00 0.00 3.57
726 727 6.280643 TCCACCTCATCATTTATCTTACGTG 58.719 40.000 0.00 0.00 0.00 4.49
727 728 5.466728 CCACCTCATCATTTATCTTACGTGG 59.533 44.000 0.00 0.00 0.00 4.94
728 729 5.050091 CACCTCATCATTTATCTTACGTGGC 60.050 44.000 0.00 0.00 0.00 5.01
729 730 5.056480 CCTCATCATTTATCTTACGTGGCA 58.944 41.667 0.00 0.00 0.00 4.92
730 731 5.702670 CCTCATCATTTATCTTACGTGGCAT 59.297 40.000 0.00 0.00 0.00 4.40
731 732 6.205464 CCTCATCATTTATCTTACGTGGCATT 59.795 38.462 0.00 0.00 0.00 3.56
732 733 7.255242 CCTCATCATTTATCTTACGTGGCATTT 60.255 37.037 0.00 0.00 0.00 2.32
733 734 7.995289 TCATCATTTATCTTACGTGGCATTTT 58.005 30.769 0.00 0.00 0.00 1.82
734 735 8.465999 TCATCATTTATCTTACGTGGCATTTTT 58.534 29.630 0.00 0.00 0.00 1.94
735 736 9.729023 CATCATTTATCTTACGTGGCATTTTTA 57.271 29.630 0.00 0.00 0.00 1.52
737 738 9.781834 TCATTTATCTTACGTGGCATTTTTAAG 57.218 29.630 0.00 0.00 0.00 1.85
738 739 9.781834 CATTTATCTTACGTGGCATTTTTAAGA 57.218 29.630 0.00 10.53 34.22 2.10
742 743 8.958119 ATCTTACGTGGCATTTTTAAGATAGA 57.042 30.769 15.47 0.00 37.60 1.98
743 744 8.780846 TCTTACGTGGCATTTTTAAGATAGAA 57.219 30.769 0.00 0.00 0.00 2.10
744 745 8.662141 TCTTACGTGGCATTTTTAAGATAGAAC 58.338 33.333 0.00 0.00 0.00 3.01
745 746 6.190954 ACGTGGCATTTTTAAGATAGAACC 57.809 37.500 0.00 0.00 0.00 3.62
746 747 5.708230 ACGTGGCATTTTTAAGATAGAACCA 59.292 36.000 0.00 0.00 0.00 3.67
747 748 6.377146 ACGTGGCATTTTTAAGATAGAACCAT 59.623 34.615 0.00 0.00 0.00 3.55
748 749 7.093945 ACGTGGCATTTTTAAGATAGAACCATT 60.094 33.333 0.00 0.00 0.00 3.16
749 750 7.220683 CGTGGCATTTTTAAGATAGAACCATTG 59.779 37.037 0.00 0.00 0.00 2.82
750 751 8.034804 GTGGCATTTTTAAGATAGAACCATTGT 58.965 33.333 0.00 0.00 0.00 2.71
751 752 9.249053 TGGCATTTTTAAGATAGAACCATTGTA 57.751 29.630 0.00 0.00 0.00 2.41
752 753 9.516314 GGCATTTTTAAGATAGAACCATTGTAC 57.484 33.333 0.00 0.00 0.00 2.90
757 758 7.801716 TTAAGATAGAACCATTGTACATGCC 57.198 36.000 0.00 0.00 0.00 4.40
758 759 4.718961 AGATAGAACCATTGTACATGCCC 58.281 43.478 0.00 0.00 0.00 5.36
759 760 4.413520 AGATAGAACCATTGTACATGCCCT 59.586 41.667 0.00 0.00 0.00 5.19
760 761 3.456380 AGAACCATTGTACATGCCCTT 57.544 42.857 0.00 0.00 0.00 3.95
761 762 4.584638 AGAACCATTGTACATGCCCTTA 57.415 40.909 0.00 0.00 0.00 2.69
762 763 5.129368 AGAACCATTGTACATGCCCTTAT 57.871 39.130 0.00 0.00 0.00 1.73
763 764 5.133221 AGAACCATTGTACATGCCCTTATC 58.867 41.667 0.00 0.00 0.00 1.75
764 765 3.832527 ACCATTGTACATGCCCTTATCC 58.167 45.455 0.00 0.00 0.00 2.59
765 766 3.463329 ACCATTGTACATGCCCTTATCCT 59.537 43.478 0.00 0.00 0.00 3.24
766 767 3.822735 CCATTGTACATGCCCTTATCCTG 59.177 47.826 0.00 0.00 0.00 3.86
767 768 4.464008 CATTGTACATGCCCTTATCCTGT 58.536 43.478 0.00 0.00 0.00 4.00
768 769 3.558931 TGTACATGCCCTTATCCTGTG 57.441 47.619 0.00 0.00 0.00 3.66
769 770 2.843730 TGTACATGCCCTTATCCTGTGT 59.156 45.455 0.00 0.00 0.00 3.72
770 771 4.034410 TGTACATGCCCTTATCCTGTGTA 58.966 43.478 0.00 0.00 0.00 2.90
771 772 4.658435 TGTACATGCCCTTATCCTGTGTAT 59.342 41.667 0.00 0.00 0.00 2.29
772 773 5.841783 TGTACATGCCCTTATCCTGTGTATA 59.158 40.000 0.00 0.00 0.00 1.47
773 774 5.489792 ACATGCCCTTATCCTGTGTATAG 57.510 43.478 0.00 0.00 0.00 1.31
774 775 4.907875 ACATGCCCTTATCCTGTGTATAGT 59.092 41.667 0.00 0.00 0.00 2.12
775 776 5.369699 ACATGCCCTTATCCTGTGTATAGTT 59.630 40.000 0.00 0.00 0.00 2.24
776 777 5.968676 TGCCCTTATCCTGTGTATAGTTT 57.031 39.130 0.00 0.00 0.00 2.66
777 778 5.680619 TGCCCTTATCCTGTGTATAGTTTG 58.319 41.667 0.00 0.00 0.00 2.93
778 779 5.190925 TGCCCTTATCCTGTGTATAGTTTGT 59.809 40.000 0.00 0.00 0.00 2.83
779 780 6.120220 GCCCTTATCCTGTGTATAGTTTGTT 58.880 40.000 0.00 0.00 0.00 2.83
780 781 6.038271 GCCCTTATCCTGTGTATAGTTTGTTG 59.962 42.308 0.00 0.00 0.00 3.33
781 782 7.110155 CCCTTATCCTGTGTATAGTTTGTTGT 58.890 38.462 0.00 0.00 0.00 3.32
782 783 7.065803 CCCTTATCCTGTGTATAGTTTGTTGTG 59.934 40.741 0.00 0.00 0.00 3.33
783 784 7.606456 CCTTATCCTGTGTATAGTTTGTTGTGT 59.394 37.037 0.00 0.00 0.00 3.72
784 785 6.801539 ATCCTGTGTATAGTTTGTTGTGTG 57.198 37.500 0.00 0.00 0.00 3.82
785 786 5.060506 TCCTGTGTATAGTTTGTTGTGTGG 58.939 41.667 0.00 0.00 0.00 4.17
786 787 4.819630 CCTGTGTATAGTTTGTTGTGTGGT 59.180 41.667 0.00 0.00 0.00 4.16
787 788 5.298276 CCTGTGTATAGTTTGTTGTGTGGTT 59.702 40.000 0.00 0.00 0.00 3.67
788 789 6.183360 CCTGTGTATAGTTTGTTGTGTGGTTT 60.183 38.462 0.00 0.00 0.00 3.27
789 790 7.159322 TGTGTATAGTTTGTTGTGTGGTTTT 57.841 32.000 0.00 0.00 0.00 2.43
790 791 8.277490 TGTGTATAGTTTGTTGTGTGGTTTTA 57.723 30.769 0.00 0.00 0.00 1.52
791 792 8.399425 TGTGTATAGTTTGTTGTGTGGTTTTAG 58.601 33.333 0.00 0.00 0.00 1.85
792 793 7.858879 GTGTATAGTTTGTTGTGTGGTTTTAGG 59.141 37.037 0.00 0.00 0.00 2.69
793 794 4.729227 AGTTTGTTGTGTGGTTTTAGGG 57.271 40.909 0.00 0.00 0.00 3.53
794 795 3.449377 AGTTTGTTGTGTGGTTTTAGGGG 59.551 43.478 0.00 0.00 0.00 4.79
795 796 2.074729 TGTTGTGTGGTTTTAGGGGG 57.925 50.000 0.00 0.00 0.00 5.40
796 797 1.569548 TGTTGTGTGGTTTTAGGGGGA 59.430 47.619 0.00 0.00 0.00 4.81
797 798 2.235891 GTTGTGTGGTTTTAGGGGGAG 58.764 52.381 0.00 0.00 0.00 4.30
798 799 1.525175 TGTGTGGTTTTAGGGGGAGT 58.475 50.000 0.00 0.00 0.00 3.85
799 800 1.854280 TGTGTGGTTTTAGGGGGAGTT 59.146 47.619 0.00 0.00 0.00 3.01
800 801 2.235891 GTGTGGTTTTAGGGGGAGTTG 58.764 52.381 0.00 0.00 0.00 3.16
801 802 1.854280 TGTGGTTTTAGGGGGAGTTGT 59.146 47.619 0.00 0.00 0.00 3.32
802 803 2.235891 GTGGTTTTAGGGGGAGTTGTG 58.764 52.381 0.00 0.00 0.00 3.33
803 804 1.854280 TGGTTTTAGGGGGAGTTGTGT 59.146 47.619 0.00 0.00 0.00 3.72
804 805 2.245287 TGGTTTTAGGGGGAGTTGTGTT 59.755 45.455 0.00 0.00 0.00 3.32
805 806 3.302161 GGTTTTAGGGGGAGTTGTGTTT 58.698 45.455 0.00 0.00 0.00 2.83
806 807 3.069016 GGTTTTAGGGGGAGTTGTGTTTG 59.931 47.826 0.00 0.00 0.00 2.93
807 808 1.989706 TTAGGGGGAGTTGTGTTTGC 58.010 50.000 0.00 0.00 0.00 3.68
808 809 1.145571 TAGGGGGAGTTGTGTTTGCT 58.854 50.000 0.00 0.00 0.00 3.91
809 810 0.261696 AGGGGGAGTTGTGTTTGCTT 59.738 50.000 0.00 0.00 0.00 3.91
810 811 1.119684 GGGGGAGTTGTGTTTGCTTT 58.880 50.000 0.00 0.00 0.00 3.51
811 812 1.484653 GGGGGAGTTGTGTTTGCTTTT 59.515 47.619 0.00 0.00 0.00 2.27
812 813 2.093181 GGGGGAGTTGTGTTTGCTTTTT 60.093 45.455 0.00 0.00 0.00 1.94
891 892 0.527565 GGTTACCGTTGGCTACTCGA 59.472 55.000 0.00 0.00 0.00 4.04
938 954 1.521450 TTCGCCCGATCGATCCCTAC 61.521 60.000 18.66 6.12 38.37 3.18
1080 1116 1.733041 CACCGTCGACAGCGTCAAT 60.733 57.895 17.16 0.00 38.98 2.57
1515 1769 9.737427 ATGACGTATGTATTTTACTCTCTTCAG 57.263 33.333 0.00 0.00 0.00 3.02
1517 1775 9.784680 GACGTATGTATTTTACTCTCTTCAGAA 57.215 33.333 0.00 0.00 0.00 3.02
1701 2079 5.364157 GGACCGATTATATATGCTTCCCTCT 59.636 44.000 0.00 0.00 0.00 3.69
1702 2080 6.227298 ACCGATTATATATGCTTCCCTCTG 57.773 41.667 0.00 0.00 0.00 3.35
1703 2081 5.721960 ACCGATTATATATGCTTCCCTCTGT 59.278 40.000 0.00 0.00 0.00 3.41
1757 3636 7.824289 GGCATACATATATTCTTGAAGCACCTA 59.176 37.037 0.00 0.00 0.00 3.08
1794 3678 5.241285 TCATAATGCCGATGTACAATTGCAT 59.759 36.000 18.25 18.25 40.87 3.96
1797 3683 3.509740 TGCCGATGTACAATTGCATTTG 58.490 40.909 17.53 17.53 0.00 2.32
1823 3716 1.742761 ATGTCAGCATTCCAAGGACG 58.257 50.000 0.00 0.00 29.54 4.79
1826 3719 1.464997 GTCAGCATTCCAAGGACGTTC 59.535 52.381 0.00 0.00 0.00 3.95
1914 3834 2.620585 GCAAGTTCTTTCCAGCAAGTCT 59.379 45.455 0.00 0.00 0.00 3.24
2009 3929 4.379082 GGCGAATTTGGTTGATAGTTCGTT 60.379 41.667 7.08 0.00 40.17 3.85
2063 3983 2.289565 GGTAGGAACCACAGCATAAGC 58.710 52.381 0.00 0.00 45.98 3.09
2071 3991 1.470098 CCACAGCATAAGCCACTCAAC 59.530 52.381 0.00 0.00 43.56 3.18
2095 4015 8.411318 ACACAAAAGAACTGCAAAGAAAATAG 57.589 30.769 0.00 0.00 0.00 1.73
2097 4017 9.515020 CACAAAAGAACTGCAAAGAAAATAGTA 57.485 29.630 0.00 0.00 0.00 1.82
2098 4018 9.736023 ACAAAAGAACTGCAAAGAAAATAGTAG 57.264 29.630 0.00 0.00 0.00 2.57
2099 4019 9.736023 CAAAAGAACTGCAAAGAAAATAGTAGT 57.264 29.630 0.00 0.00 0.00 2.73
2168 4088 8.568861 ACGCGTGTTTTTATAAATAATTTGTCG 58.431 29.630 12.93 0.45 0.00 4.35
2170 4090 9.063739 GCGTGTTTTTATAAATAATTTGTCGGA 57.936 29.630 0.00 0.00 0.00 4.55
2206 4126 9.968743 GAAGAAAATATGTTTGAGTAGGTAACG 57.031 33.333 0.00 0.00 46.39 3.18
2207 4127 8.488651 AGAAAATATGTTTGAGTAGGTAACGG 57.511 34.615 0.00 0.00 46.39 4.44
2272 4194 8.792633 CATAACTGAAATTTACTGAACCTTGGA 58.207 33.333 0.00 0.00 0.00 3.53
2344 4270 4.846779 ATTTCCACACCATGTACAACAC 57.153 40.909 0.00 0.00 0.00 3.32
2354 4280 4.283467 ACCATGTACAACACTGAGAAGCTA 59.717 41.667 0.00 0.00 0.00 3.32
2361 4287 1.542030 ACACTGAGAAGCTACTCGTGG 59.458 52.381 17.19 4.69 41.12 4.94
2373 4299 3.428999 GCTACTCGTGGATCAAGCTTACA 60.429 47.826 0.00 0.00 0.00 2.41
2374 4300 3.678056 ACTCGTGGATCAAGCTTACAA 57.322 42.857 0.00 0.00 0.00 2.41
2375 4301 3.589988 ACTCGTGGATCAAGCTTACAAG 58.410 45.455 0.00 0.00 0.00 3.16
2376 4302 3.006967 ACTCGTGGATCAAGCTTACAAGT 59.993 43.478 0.00 0.00 0.00 3.16
2377 4303 3.997021 CTCGTGGATCAAGCTTACAAGTT 59.003 43.478 0.00 0.00 0.00 2.66
2378 4304 5.142061 TCGTGGATCAAGCTTACAAGTTA 57.858 39.130 0.00 0.00 0.00 2.24
2379 4305 4.927425 TCGTGGATCAAGCTTACAAGTTAC 59.073 41.667 0.00 0.00 0.00 2.50
2421 4347 3.316588 TCATACTCTCTTCTTGCTAGCCG 59.683 47.826 13.29 3.30 0.00 5.52
2422 4348 0.174617 ACTCTCTTCTTGCTAGCCGC 59.825 55.000 13.29 0.00 39.77 6.53
2423 4349 0.459489 CTCTCTTCTTGCTAGCCGCT 59.541 55.000 13.29 0.00 40.11 5.52
2495 4421 1.202222 GGTTCATGAAGATTGCCAGCG 60.202 52.381 8.80 0.00 0.00 5.18
2498 4424 3.473923 TCATGAAGATTGCCAGCGATA 57.526 42.857 0.00 0.00 0.00 2.92
2512 4438 4.635223 CCAGCGATAAGAATCTCATCCAA 58.365 43.478 0.00 0.00 0.00 3.53
2529 4455 6.489603 TCATCCAATACTTAGGCCTGAAAAA 58.510 36.000 17.99 0.00 0.00 1.94
2559 4485 6.409695 CCATTGGTACTCATGGGAATTAGTCT 60.410 42.308 0.00 0.00 0.00 3.24
2582 4514 8.251721 GTCTGTACTAAAAAGAATAGCTCTGGA 58.748 37.037 0.00 0.00 33.37 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.237751 CGCGACTAATCCTTGCCGG 61.238 63.158 0.00 0.00 0.00 6.13
4 5 1.491505 GCTCCGCGACTAATCCTTGC 61.492 60.000 8.23 0.00 0.00 4.01
5 6 0.103208 AGCTCCGCGACTAATCCTTG 59.897 55.000 8.23 0.00 0.00 3.61
6 7 0.386113 GAGCTCCGCGACTAATCCTT 59.614 55.000 8.23 0.00 0.00 3.36
129 130 3.119096 GAAGGAGTCGTTGCGGGC 61.119 66.667 2.13 0.00 0.00 6.13
210 211 3.031417 GCTAGCGAAGGGGAGCCAA 62.031 63.158 0.00 0.00 0.00 4.52
211 212 3.470888 GCTAGCGAAGGGGAGCCA 61.471 66.667 0.00 0.00 0.00 4.75
212 213 4.593864 CGCTAGCGAAGGGGAGCC 62.594 72.222 32.98 0.00 42.83 4.70
214 215 4.593864 GGCGCTAGCGAAGGGGAG 62.594 72.222 39.52 9.53 46.35 4.30
217 218 4.241555 ATGGGCGCTAGCGAAGGG 62.242 66.667 39.52 11.92 46.35 3.95
218 219 2.969238 CATGGGCGCTAGCGAAGG 60.969 66.667 39.52 21.29 46.35 3.46
219 220 2.969238 CCATGGGCGCTAGCGAAG 60.969 66.667 39.52 21.51 46.35 3.79
220 221 4.545706 CCCATGGGCGCTAGCGAA 62.546 66.667 39.52 23.74 46.35 4.70
231 232 1.530771 CTCCTCTTCTGCCCCATGG 59.469 63.158 4.14 4.14 0.00 3.66
232 233 0.984961 TCCTCCTCTTCTGCCCCATG 60.985 60.000 0.00 0.00 0.00 3.66
233 234 0.693767 CTCCTCCTCTTCTGCCCCAT 60.694 60.000 0.00 0.00 0.00 4.00
234 235 1.306482 CTCCTCCTCTTCTGCCCCA 60.306 63.158 0.00 0.00 0.00 4.96
235 236 1.306568 ACTCCTCCTCTTCTGCCCC 60.307 63.158 0.00 0.00 0.00 5.80
236 237 1.621672 CCACTCCTCCTCTTCTGCCC 61.622 65.000 0.00 0.00 0.00 5.36
237 238 0.907230 ACCACTCCTCCTCTTCTGCC 60.907 60.000 0.00 0.00 0.00 4.85
238 239 1.754226 CTACCACTCCTCCTCTTCTGC 59.246 57.143 0.00 0.00 0.00 4.26
239 240 2.383855 CCTACCACTCCTCCTCTTCTG 58.616 57.143 0.00 0.00 0.00 3.02
240 241 1.342574 GCCTACCACTCCTCCTCTTCT 60.343 57.143 0.00 0.00 0.00 2.85
241 242 1.116308 GCCTACCACTCCTCCTCTTC 58.884 60.000 0.00 0.00 0.00 2.87
242 243 0.325765 GGCCTACCACTCCTCCTCTT 60.326 60.000 0.00 0.00 35.26 2.85
243 244 1.311747 GGCCTACCACTCCTCCTCT 59.688 63.158 0.00 0.00 35.26 3.69
244 245 2.128507 CGGCCTACCACTCCTCCTC 61.129 68.421 0.00 0.00 34.57 3.71
245 246 2.042843 CGGCCTACCACTCCTCCT 60.043 66.667 0.00 0.00 34.57 3.69
246 247 3.155167 CCGGCCTACCACTCCTCC 61.155 72.222 0.00 0.00 34.57 4.30
247 248 3.851128 GCCGGCCTACCACTCCTC 61.851 72.222 18.11 0.00 34.57 3.71
250 251 3.537874 ATCGCCGGCCTACCACTC 61.538 66.667 23.46 0.00 34.57 3.51
251 252 3.849951 CATCGCCGGCCTACCACT 61.850 66.667 23.46 0.00 34.57 4.00
252 253 4.910585 CCATCGCCGGCCTACCAC 62.911 72.222 23.46 0.00 34.57 4.16
260 261 1.298339 GAAAAATCGCCATCGCCGG 60.298 57.895 0.00 0.00 35.26 6.13
261 262 1.651132 CGAAAAATCGCCATCGCCG 60.651 57.895 0.00 0.00 35.26 6.46
262 263 1.298339 CCGAAAAATCGCCATCGCC 60.298 57.895 0.00 0.00 34.13 5.54
263 264 1.298339 CCCGAAAAATCGCCATCGC 60.298 57.895 0.00 0.00 34.13 4.58
264 265 0.304705 CTCCCGAAAAATCGCCATCG 59.695 55.000 0.00 0.00 35.19 3.84
265 266 1.599542 CTCTCCCGAAAAATCGCCATC 59.400 52.381 0.00 0.00 0.00 3.51
266 267 1.209504 TCTCTCCCGAAAAATCGCCAT 59.790 47.619 0.00 0.00 0.00 4.40
267 268 0.611200 TCTCTCCCGAAAAATCGCCA 59.389 50.000 0.00 0.00 0.00 5.69
268 269 1.134788 TCTCTCTCCCGAAAAATCGCC 60.135 52.381 0.00 0.00 0.00 5.54
269 270 2.295253 TCTCTCTCCCGAAAAATCGC 57.705 50.000 0.00 0.00 0.00 4.58
270 271 3.557595 CCAATCTCTCTCCCGAAAAATCG 59.442 47.826 0.00 0.00 0.00 3.34
271 272 4.770795 TCCAATCTCTCTCCCGAAAAATC 58.229 43.478 0.00 0.00 0.00 2.17
272 273 4.844349 TCCAATCTCTCTCCCGAAAAAT 57.156 40.909 0.00 0.00 0.00 1.82
273 274 4.680708 CGATCCAATCTCTCTCCCGAAAAA 60.681 45.833 0.00 0.00 0.00 1.94
274 275 3.181475 CGATCCAATCTCTCTCCCGAAAA 60.181 47.826 0.00 0.00 0.00 2.29
275 276 2.362397 CGATCCAATCTCTCTCCCGAAA 59.638 50.000 0.00 0.00 0.00 3.46
276 277 1.957177 CGATCCAATCTCTCTCCCGAA 59.043 52.381 0.00 0.00 0.00 4.30
277 278 1.610363 CGATCCAATCTCTCTCCCGA 58.390 55.000 0.00 0.00 0.00 5.14
278 279 0.600557 CCGATCCAATCTCTCTCCCG 59.399 60.000 0.00 0.00 0.00 5.14
279 280 0.972883 CCCGATCCAATCTCTCTCCC 59.027 60.000 0.00 0.00 0.00 4.30
280 281 0.972883 CCCCGATCCAATCTCTCTCC 59.027 60.000 0.00 0.00 0.00 3.71
281 282 1.892474 CTCCCCGATCCAATCTCTCTC 59.108 57.143 0.00 0.00 0.00 3.20
282 283 1.501170 TCTCCCCGATCCAATCTCTCT 59.499 52.381 0.00 0.00 0.00 3.10
283 284 1.892474 CTCTCCCCGATCCAATCTCTC 59.108 57.143 0.00 0.00 0.00 3.20
284 285 1.482177 CCTCTCCCCGATCCAATCTCT 60.482 57.143 0.00 0.00 0.00 3.10
285 286 0.972883 CCTCTCCCCGATCCAATCTC 59.027 60.000 0.00 0.00 0.00 2.75
286 287 0.472734 CCCTCTCCCCGATCCAATCT 60.473 60.000 0.00 0.00 0.00 2.40
287 288 2.062070 CCCTCTCCCCGATCCAATC 58.938 63.158 0.00 0.00 0.00 2.67
288 289 2.150051 GCCCTCTCCCCGATCCAAT 61.150 63.158 0.00 0.00 0.00 3.16
289 290 2.768344 GCCCTCTCCCCGATCCAA 60.768 66.667 0.00 0.00 0.00 3.53
290 291 3.767268 AGCCCTCTCCCCGATCCA 61.767 66.667 0.00 0.00 0.00 3.41
291 292 3.237741 CAGCCCTCTCCCCGATCC 61.238 72.222 0.00 0.00 0.00 3.36
292 293 2.123251 TCAGCCCTCTCCCCGATC 60.123 66.667 0.00 0.00 0.00 3.69
293 294 2.123077 CTCAGCCCTCTCCCCGAT 60.123 66.667 0.00 0.00 0.00 4.18
294 295 4.465446 CCTCAGCCCTCTCCCCGA 62.465 72.222 0.00 0.00 0.00 5.14
295 296 2.873557 TTACCTCAGCCCTCTCCCCG 62.874 65.000 0.00 0.00 0.00 5.73
296 297 0.400670 ATTACCTCAGCCCTCTCCCC 60.401 60.000 0.00 0.00 0.00 4.81
297 298 0.761802 CATTACCTCAGCCCTCTCCC 59.238 60.000 0.00 0.00 0.00 4.30
298 299 0.761802 CCATTACCTCAGCCCTCTCC 59.238 60.000 0.00 0.00 0.00 3.71
299 300 0.761802 CCCATTACCTCAGCCCTCTC 59.238 60.000 0.00 0.00 0.00 3.20
300 301 0.695803 CCCCATTACCTCAGCCCTCT 60.696 60.000 0.00 0.00 0.00 3.69
301 302 1.709994 CCCCCATTACCTCAGCCCTC 61.710 65.000 0.00 0.00 0.00 4.30
302 303 1.697754 CCCCCATTACCTCAGCCCT 60.698 63.158 0.00 0.00 0.00 5.19
303 304 2.927056 CCCCCATTACCTCAGCCC 59.073 66.667 0.00 0.00 0.00 5.19
304 305 2.195956 GCCCCCATTACCTCAGCC 59.804 66.667 0.00 0.00 0.00 4.85
305 306 2.203209 CGCCCCCATTACCTCAGC 60.203 66.667 0.00 0.00 0.00 4.26
306 307 2.510906 CCGCCCCCATTACCTCAG 59.489 66.667 0.00 0.00 0.00 3.35
307 308 3.093835 CCCGCCCCCATTACCTCA 61.094 66.667 0.00 0.00 0.00 3.86
308 309 3.886001 CCCCGCCCCCATTACCTC 61.886 72.222 0.00 0.00 0.00 3.85
327 328 4.753662 TGTCCCCCGGTCCTCGAG 62.754 72.222 5.13 5.13 42.43 4.04
337 338 2.043248 TAGAGCTCCGTGTCCCCC 60.043 66.667 10.93 0.00 0.00 5.40
338 339 2.787567 GCTAGAGCTCCGTGTCCCC 61.788 68.421 10.93 0.00 38.21 4.81
339 340 2.052690 TGCTAGAGCTCCGTGTCCC 61.053 63.158 10.93 0.00 42.66 4.46
340 341 1.139947 GTGCTAGAGCTCCGTGTCC 59.860 63.158 10.93 0.00 42.66 4.02
341 342 1.226435 CGTGCTAGAGCTCCGTGTC 60.226 63.158 10.93 0.00 42.66 3.67
342 343 1.032657 ATCGTGCTAGAGCTCCGTGT 61.033 55.000 10.93 0.00 42.66 4.49
343 344 0.593518 CATCGTGCTAGAGCTCCGTG 60.594 60.000 10.93 1.74 42.66 4.94
344 345 1.729470 CCATCGTGCTAGAGCTCCGT 61.729 60.000 10.93 0.00 42.66 4.69
345 346 1.007964 CCATCGTGCTAGAGCTCCG 60.008 63.158 10.93 6.54 42.66 4.63
346 347 1.365633 CCCATCGTGCTAGAGCTCC 59.634 63.158 10.93 0.00 42.66 4.70
347 348 1.300542 GCCCATCGTGCTAGAGCTC 60.301 63.158 5.27 5.27 42.66 4.09
348 349 2.025767 CTGCCCATCGTGCTAGAGCT 62.026 60.000 2.72 0.00 42.66 4.09
349 350 1.593750 CTGCCCATCGTGCTAGAGC 60.594 63.158 0.00 0.00 42.50 4.09
350 351 0.249238 GTCTGCCCATCGTGCTAGAG 60.249 60.000 0.00 0.00 0.00 2.43
351 352 1.676678 GGTCTGCCCATCGTGCTAGA 61.677 60.000 0.00 0.00 0.00 2.43
352 353 1.227380 GGTCTGCCCATCGTGCTAG 60.227 63.158 0.00 0.00 0.00 3.42
353 354 1.987306 TGGTCTGCCCATCGTGCTA 60.987 57.895 0.00 0.00 38.72 3.49
354 355 3.321648 TGGTCTGCCCATCGTGCT 61.322 61.111 0.00 0.00 38.72 4.40
378 379 1.334869 GATTAATTGTCCTGCCGGCAG 59.665 52.381 43.23 43.23 43.26 4.85
379 380 1.064758 AGATTAATTGTCCTGCCGGCA 60.065 47.619 30.59 30.59 0.00 5.69
380 381 1.334869 CAGATTAATTGTCCTGCCGGC 59.665 52.381 22.73 22.73 0.00 6.13
381 382 2.874701 CTCAGATTAATTGTCCTGCCGG 59.125 50.000 0.00 0.00 0.00 6.13
382 383 2.289002 GCTCAGATTAATTGTCCTGCCG 59.711 50.000 0.00 0.00 0.00 5.69
383 384 2.620585 GGCTCAGATTAATTGTCCTGCC 59.379 50.000 0.00 0.00 0.00 4.85
384 385 3.282021 TGGCTCAGATTAATTGTCCTGC 58.718 45.455 0.00 0.00 0.00 4.85
385 386 5.591472 TCAATGGCTCAGATTAATTGTCCTG 59.409 40.000 0.00 0.00 31.63 3.86
386 387 5.759059 TCAATGGCTCAGATTAATTGTCCT 58.241 37.500 0.00 0.00 31.63 3.85
387 388 6.645790 ATCAATGGCTCAGATTAATTGTCC 57.354 37.500 0.00 0.00 31.63 4.02
388 389 7.437267 CCAAATCAATGGCTCAGATTAATTGTC 59.563 37.037 0.00 0.00 32.78 3.18
389 390 7.270047 CCAAATCAATGGCTCAGATTAATTGT 58.730 34.615 0.00 0.00 32.78 2.71
390 391 6.704493 CCCAAATCAATGGCTCAGATTAATTG 59.296 38.462 0.00 0.00 39.26 2.32
391 392 6.384886 ACCCAAATCAATGGCTCAGATTAATT 59.615 34.615 0.00 0.00 39.26 1.40
392 393 5.901276 ACCCAAATCAATGGCTCAGATTAAT 59.099 36.000 0.00 0.00 39.26 1.40
393 394 5.271598 ACCCAAATCAATGGCTCAGATTAA 58.728 37.500 0.00 0.00 39.26 1.40
394 395 4.870636 ACCCAAATCAATGGCTCAGATTA 58.129 39.130 0.00 0.00 39.26 1.75
395 396 3.716431 ACCCAAATCAATGGCTCAGATT 58.284 40.909 0.00 0.00 39.26 2.40
396 397 3.393426 ACCCAAATCAATGGCTCAGAT 57.607 42.857 0.00 0.00 39.26 2.90
397 398 2.827322 CAACCCAAATCAATGGCTCAGA 59.173 45.455 0.00 0.00 39.26 3.27
398 399 2.675889 GCAACCCAAATCAATGGCTCAG 60.676 50.000 0.00 0.00 39.26 3.35
399 400 1.275856 GCAACCCAAATCAATGGCTCA 59.724 47.619 0.00 0.00 39.26 4.26
400 401 1.275856 TGCAACCCAAATCAATGGCTC 59.724 47.619 0.00 0.00 39.26 4.70
401 402 1.276989 CTGCAACCCAAATCAATGGCT 59.723 47.619 0.00 0.00 39.26 4.75
402 403 1.275856 TCTGCAACCCAAATCAATGGC 59.724 47.619 0.00 0.00 39.26 4.40
403 404 3.681593 TTCTGCAACCCAAATCAATGG 57.318 42.857 0.00 0.00 40.35 3.16
404 405 7.042950 TCAATATTCTGCAACCCAAATCAATG 58.957 34.615 0.00 0.00 0.00 2.82
405 406 7.185318 TCAATATTCTGCAACCCAAATCAAT 57.815 32.000 0.00 0.00 0.00 2.57
406 407 6.602410 TCAATATTCTGCAACCCAAATCAA 57.398 33.333 0.00 0.00 0.00 2.57
407 408 6.154877 ACATCAATATTCTGCAACCCAAATCA 59.845 34.615 0.00 0.00 0.00 2.57
408 409 6.576185 ACATCAATATTCTGCAACCCAAATC 58.424 36.000 0.00 0.00 0.00 2.17
409 410 6.549433 ACATCAATATTCTGCAACCCAAAT 57.451 33.333 0.00 0.00 0.00 2.32
410 411 5.999205 ACATCAATATTCTGCAACCCAAA 57.001 34.783 0.00 0.00 0.00 3.28
411 412 7.658525 ATTACATCAATATTCTGCAACCCAA 57.341 32.000 0.00 0.00 0.00 4.12
412 413 8.795513 CATATTACATCAATATTCTGCAACCCA 58.204 33.333 0.00 0.00 37.67 4.51
413 414 8.246180 CCATATTACATCAATATTCTGCAACCC 58.754 37.037 0.00 0.00 37.67 4.11
414 415 9.013229 TCCATATTACATCAATATTCTGCAACC 57.987 33.333 0.00 0.00 37.67 3.77
415 416 9.831737 GTCCATATTACATCAATATTCTGCAAC 57.168 33.333 0.00 0.00 37.67 4.17
416 417 9.571816 TGTCCATATTACATCAATATTCTGCAA 57.428 29.630 0.00 0.00 37.67 4.08
417 418 9.223099 CTGTCCATATTACATCAATATTCTGCA 57.777 33.333 0.00 0.00 37.67 4.41
418 419 9.224267 ACTGTCCATATTACATCAATATTCTGC 57.776 33.333 0.00 0.00 37.67 4.26
425 426 8.884323 ACATCCTACTGTCCATATTACATCAAT 58.116 33.333 0.00 0.00 0.00 2.57
426 427 8.262601 ACATCCTACTGTCCATATTACATCAA 57.737 34.615 0.00 0.00 0.00 2.57
427 428 7.855784 ACATCCTACTGTCCATATTACATCA 57.144 36.000 0.00 0.00 0.00 3.07
455 456 9.292195 AGGACCTTTCGATCAAATTAAGTTAAA 57.708 29.630 0.00 0.00 0.00 1.52
456 457 8.726988 CAGGACCTTTCGATCAAATTAAGTTAA 58.273 33.333 0.00 0.00 0.00 2.01
457 458 7.335924 CCAGGACCTTTCGATCAAATTAAGTTA 59.664 37.037 0.00 0.00 0.00 2.24
458 459 6.151144 CCAGGACCTTTCGATCAAATTAAGTT 59.849 38.462 0.00 0.00 0.00 2.66
459 460 5.648092 CCAGGACCTTTCGATCAAATTAAGT 59.352 40.000 0.00 0.00 0.00 2.24
460 461 5.648092 ACCAGGACCTTTCGATCAAATTAAG 59.352 40.000 0.00 0.00 0.00 1.85
461 462 5.566469 ACCAGGACCTTTCGATCAAATTAA 58.434 37.500 0.00 0.00 0.00 1.40
462 463 5.174037 ACCAGGACCTTTCGATCAAATTA 57.826 39.130 0.00 0.00 0.00 1.40
463 464 4.034285 ACCAGGACCTTTCGATCAAATT 57.966 40.909 0.00 0.00 0.00 1.82
464 465 3.721087 ACCAGGACCTTTCGATCAAAT 57.279 42.857 0.00 0.00 0.00 2.32
465 466 3.502123 AACCAGGACCTTTCGATCAAA 57.498 42.857 0.00 0.00 0.00 2.69
466 467 3.055385 CCTAACCAGGACCTTTCGATCAA 60.055 47.826 0.00 0.00 45.91 2.57
467 468 2.500098 CCTAACCAGGACCTTTCGATCA 59.500 50.000 0.00 0.00 45.91 2.92
468 469 2.158943 CCCTAACCAGGACCTTTCGATC 60.159 54.545 0.00 0.00 45.91 3.69
469 470 1.838077 CCCTAACCAGGACCTTTCGAT 59.162 52.381 0.00 0.00 45.91 3.59
470 471 1.272807 CCCTAACCAGGACCTTTCGA 58.727 55.000 0.00 0.00 45.91 3.71
471 472 0.392595 GCCCTAACCAGGACCTTTCG 60.393 60.000 0.00 0.00 45.91 3.46
472 473 0.696501 TGCCCTAACCAGGACCTTTC 59.303 55.000 0.00 0.00 45.91 2.62
473 474 1.382914 ATGCCCTAACCAGGACCTTT 58.617 50.000 0.00 0.00 45.91 3.11
474 475 2.280308 TATGCCCTAACCAGGACCTT 57.720 50.000 0.00 0.00 45.91 3.50
475 476 2.514726 ATATGCCCTAACCAGGACCT 57.485 50.000 0.00 0.00 45.91 3.85
476 477 2.976882 TGTATATGCCCTAACCAGGACC 59.023 50.000 0.00 0.00 45.91 4.46
477 478 4.505039 CCTTGTATATGCCCTAACCAGGAC 60.505 50.000 0.00 0.00 45.91 3.85
478 479 3.650942 CCTTGTATATGCCCTAACCAGGA 59.349 47.826 0.00 0.00 45.91 3.86
479 480 3.244911 CCCTTGTATATGCCCTAACCAGG 60.245 52.174 0.00 0.00 42.22 4.45
480 481 3.394606 ACCCTTGTATATGCCCTAACCAG 59.605 47.826 0.00 0.00 0.00 4.00
481 482 3.399454 ACCCTTGTATATGCCCTAACCA 58.601 45.455 0.00 0.00 0.00 3.67
482 483 4.141344 TCAACCCTTGTATATGCCCTAACC 60.141 45.833 0.00 0.00 0.00 2.85
483 484 5.043737 TCAACCCTTGTATATGCCCTAAC 57.956 43.478 0.00 0.00 0.00 2.34
484 485 5.922960 ATCAACCCTTGTATATGCCCTAA 57.077 39.130 0.00 0.00 0.00 2.69
485 486 6.790461 TCTTATCAACCCTTGTATATGCCCTA 59.210 38.462 0.00 0.00 0.00 3.53
486 487 5.610982 TCTTATCAACCCTTGTATATGCCCT 59.389 40.000 0.00 0.00 0.00 5.19
487 488 5.876357 TCTTATCAACCCTTGTATATGCCC 58.124 41.667 0.00 0.00 0.00 5.36
488 489 8.322091 ACTATCTTATCAACCCTTGTATATGCC 58.678 37.037 0.00 0.00 0.00 4.40
489 490 9.372369 GACTATCTTATCAACCCTTGTATATGC 57.628 37.037 0.00 0.00 0.00 3.14
552 553 6.721208 AGATGACCCATTGTAGACATGTTTTT 59.279 34.615 0.00 0.00 0.00 1.94
553 554 6.248433 AGATGACCCATTGTAGACATGTTTT 58.752 36.000 0.00 0.00 0.00 2.43
554 555 5.819991 AGATGACCCATTGTAGACATGTTT 58.180 37.500 0.00 0.00 0.00 2.83
555 556 5.441718 AGATGACCCATTGTAGACATGTT 57.558 39.130 0.00 0.00 0.00 2.71
556 557 6.753913 ATAGATGACCCATTGTAGACATGT 57.246 37.500 0.00 0.00 0.00 3.21
557 558 7.332926 GCTAATAGATGACCCATTGTAGACATG 59.667 40.741 0.00 0.00 0.00 3.21
558 559 7.236432 AGCTAATAGATGACCCATTGTAGACAT 59.764 37.037 0.00 0.00 0.00 3.06
559 560 6.554982 AGCTAATAGATGACCCATTGTAGACA 59.445 38.462 0.00 0.00 0.00 3.41
560 561 6.998802 AGCTAATAGATGACCCATTGTAGAC 58.001 40.000 0.00 0.00 0.00 2.59
561 562 7.618019 AAGCTAATAGATGACCCATTGTAGA 57.382 36.000 0.00 0.00 0.00 2.59
562 563 9.950496 ATAAAGCTAATAGATGACCCATTGTAG 57.050 33.333 0.00 0.00 0.00 2.74
563 564 9.944376 GATAAAGCTAATAGATGACCCATTGTA 57.056 33.333 0.00 0.00 0.00 2.41
564 565 8.664079 AGATAAAGCTAATAGATGACCCATTGT 58.336 33.333 0.00 0.00 0.00 2.71
565 566 9.512588 AAGATAAAGCTAATAGATGACCCATTG 57.487 33.333 0.00 0.00 0.00 2.82
566 567 9.732130 GAAGATAAAGCTAATAGATGACCCATT 57.268 33.333 0.00 0.00 0.00 3.16
567 568 8.884323 TGAAGATAAAGCTAATAGATGACCCAT 58.116 33.333 0.00 0.00 0.00 4.00
568 569 8.262601 TGAAGATAAAGCTAATAGATGACCCA 57.737 34.615 0.00 0.00 0.00 4.51
569 570 9.732130 ATTGAAGATAAAGCTAATAGATGACCC 57.268 33.333 0.00 0.00 0.00 4.46
599 600 9.444600 GTCTCACCATATTTTTAGGAACAACTA 57.555 33.333 0.00 0.00 0.00 2.24
600 601 7.942341 TGTCTCACCATATTTTTAGGAACAACT 59.058 33.333 0.00 0.00 0.00 3.16
601 602 8.106247 TGTCTCACCATATTTTTAGGAACAAC 57.894 34.615 0.00 0.00 0.00 3.32
602 603 8.698973 TTGTCTCACCATATTTTTAGGAACAA 57.301 30.769 0.00 0.00 0.00 2.83
603 604 8.698973 TTTGTCTCACCATATTTTTAGGAACA 57.301 30.769 0.00 0.00 0.00 3.18
606 607 9.308000 ACAATTTGTCTCACCATATTTTTAGGA 57.692 29.630 0.00 0.00 0.00 2.94
607 608 9.357652 CACAATTTGTCTCACCATATTTTTAGG 57.642 33.333 0.00 0.00 0.00 2.69
608 609 8.863049 GCACAATTTGTCTCACCATATTTTTAG 58.137 33.333 0.00 0.00 0.00 1.85
609 610 8.584157 AGCACAATTTGTCTCACCATATTTTTA 58.416 29.630 0.00 0.00 0.00 1.52
610 611 7.444299 AGCACAATTTGTCTCACCATATTTTT 58.556 30.769 0.00 0.00 0.00 1.94
611 612 6.996509 AGCACAATTTGTCTCACCATATTTT 58.003 32.000 0.00 0.00 0.00 1.82
612 613 6.594788 AGCACAATTTGTCTCACCATATTT 57.405 33.333 0.00 0.00 0.00 1.40
613 614 7.611467 TCTTAGCACAATTTGTCTCACCATATT 59.389 33.333 0.00 0.00 0.00 1.28
614 615 7.112122 TCTTAGCACAATTTGTCTCACCATAT 58.888 34.615 0.00 0.00 0.00 1.78
615 616 6.472016 TCTTAGCACAATTTGTCTCACCATA 58.528 36.000 0.00 0.00 0.00 2.74
616 617 5.316167 TCTTAGCACAATTTGTCTCACCAT 58.684 37.500 0.00 0.00 0.00 3.55
617 618 4.713553 TCTTAGCACAATTTGTCTCACCA 58.286 39.130 0.00 0.00 0.00 4.17
618 619 4.997395 TCTCTTAGCACAATTTGTCTCACC 59.003 41.667 0.00 0.00 0.00 4.02
619 620 6.369890 TGATCTCTTAGCACAATTTGTCTCAC 59.630 38.462 0.00 0.00 0.00 3.51
620 621 6.466812 TGATCTCTTAGCACAATTTGTCTCA 58.533 36.000 0.00 0.00 0.00 3.27
621 622 6.974932 TGATCTCTTAGCACAATTTGTCTC 57.025 37.500 0.00 0.00 0.00 3.36
622 623 7.337167 AGATGATCTCTTAGCACAATTTGTCT 58.663 34.615 0.00 3.34 0.00 3.41
623 624 7.551035 AGATGATCTCTTAGCACAATTTGTC 57.449 36.000 0.00 0.00 0.00 3.18
624 625 7.551035 GAGATGATCTCTTAGCACAATTTGT 57.449 36.000 14.98 0.00 40.30 2.83
654 655 8.157476 AGGCTTGTCTTGTCTTATTTAAGAGAA 58.843 33.333 8.94 8.94 42.48 2.87
655 656 7.680730 AGGCTTGTCTTGTCTTATTTAAGAGA 58.319 34.615 0.29 0.00 42.48 3.10
656 657 7.913674 AGGCTTGTCTTGTCTTATTTAAGAG 57.086 36.000 0.29 0.00 42.48 2.85
657 658 8.157476 AGAAGGCTTGTCTTGTCTTATTTAAGA 58.843 33.333 3.46 0.00 39.82 2.10
658 659 8.329203 AGAAGGCTTGTCTTGTCTTATTTAAG 57.671 34.615 3.46 0.00 34.65 1.85
659 660 8.157476 AGAGAAGGCTTGTCTTGTCTTATTTAA 58.843 33.333 20.19 0.00 42.39 1.52
660 661 7.680730 AGAGAAGGCTTGTCTTGTCTTATTTA 58.319 34.615 20.19 0.00 42.39 1.40
661 662 6.538263 AGAGAAGGCTTGTCTTGTCTTATTT 58.462 36.000 20.19 0.00 42.39 1.40
662 663 6.120507 AGAGAAGGCTTGTCTTGTCTTATT 57.879 37.500 20.19 0.00 42.39 1.40
663 664 5.753721 AGAGAAGGCTTGTCTTGTCTTAT 57.246 39.130 20.19 0.00 42.39 1.73
665 666 4.429854 AAGAGAAGGCTTGTCTTGTCTT 57.570 40.909 31.60 17.76 46.06 3.01
666 667 5.247110 TCATAAGAGAAGGCTTGTCTTGTCT 59.753 40.000 36.27 23.23 45.48 3.41
667 668 5.482908 TCATAAGAGAAGGCTTGTCTTGTC 58.517 41.667 36.27 10.51 42.48 3.18
668 669 5.489792 TCATAAGAGAAGGCTTGTCTTGT 57.510 39.130 36.27 30.55 42.48 3.16
669 670 6.998968 AATCATAAGAGAAGGCTTGTCTTG 57.001 37.500 36.27 26.46 42.48 3.02
670 671 6.944862 ACAAATCATAAGAGAAGGCTTGTCTT 59.055 34.615 33.39 33.39 44.39 3.01
671 672 6.479884 ACAAATCATAAGAGAAGGCTTGTCT 58.520 36.000 20.19 20.19 34.32 3.41
672 673 6.597280 AGACAAATCATAAGAGAAGGCTTGTC 59.403 38.462 16.04 16.04 40.10 3.18
673 674 6.479884 AGACAAATCATAAGAGAAGGCTTGT 58.520 36.000 3.46 0.00 0.00 3.16
674 675 6.822676 AGAGACAAATCATAAGAGAAGGCTTG 59.177 38.462 3.46 0.00 0.00 4.01
675 676 6.956497 AGAGACAAATCATAAGAGAAGGCTT 58.044 36.000 0.00 0.00 0.00 4.35
676 677 6.407979 GGAGAGACAAATCATAAGAGAAGGCT 60.408 42.308 0.00 0.00 0.00 4.58
677 678 5.757808 GGAGAGACAAATCATAAGAGAAGGC 59.242 44.000 0.00 0.00 0.00 4.35
678 679 7.123355 AGGAGAGACAAATCATAAGAGAAGG 57.877 40.000 0.00 0.00 0.00 3.46
679 680 7.147759 TGGAGGAGAGACAAATCATAAGAGAAG 60.148 40.741 0.00 0.00 0.00 2.85
680 681 6.669591 TGGAGGAGAGACAAATCATAAGAGAA 59.330 38.462 0.00 0.00 0.00 2.87
681 682 6.097554 GTGGAGGAGAGACAAATCATAAGAGA 59.902 42.308 0.00 0.00 0.00 3.10
682 683 6.279882 GTGGAGGAGAGACAAATCATAAGAG 58.720 44.000 0.00 0.00 0.00 2.85
683 684 5.129485 GGTGGAGGAGAGACAAATCATAAGA 59.871 44.000 0.00 0.00 0.00 2.10
684 685 5.130145 AGGTGGAGGAGAGACAAATCATAAG 59.870 44.000 0.00 0.00 0.00 1.73
685 686 5.032846 AGGTGGAGGAGAGACAAATCATAA 58.967 41.667 0.00 0.00 0.00 1.90
686 687 4.624913 AGGTGGAGGAGAGACAAATCATA 58.375 43.478 0.00 0.00 0.00 2.15
687 688 3.454082 GAGGTGGAGGAGAGACAAATCAT 59.546 47.826 0.00 0.00 0.00 2.45
688 689 2.834549 GAGGTGGAGGAGAGACAAATCA 59.165 50.000 0.00 0.00 0.00 2.57
689 690 2.834549 TGAGGTGGAGGAGAGACAAATC 59.165 50.000 0.00 0.00 0.00 2.17
690 691 2.907892 TGAGGTGGAGGAGAGACAAAT 58.092 47.619 0.00 0.00 0.00 2.32
691 692 2.398754 TGAGGTGGAGGAGAGACAAA 57.601 50.000 0.00 0.00 0.00 2.83
692 693 2.225369 TGATGAGGTGGAGGAGAGACAA 60.225 50.000 0.00 0.00 0.00 3.18
693 694 1.359130 TGATGAGGTGGAGGAGAGACA 59.641 52.381 0.00 0.00 0.00 3.41
694 695 2.151502 TGATGAGGTGGAGGAGAGAC 57.848 55.000 0.00 0.00 0.00 3.36
695 696 3.411454 AATGATGAGGTGGAGGAGAGA 57.589 47.619 0.00 0.00 0.00 3.10
696 697 5.543405 AGATAAATGATGAGGTGGAGGAGAG 59.457 44.000 0.00 0.00 0.00 3.20
697 698 5.471424 AGATAAATGATGAGGTGGAGGAGA 58.529 41.667 0.00 0.00 0.00 3.71
698 699 5.822132 AGATAAATGATGAGGTGGAGGAG 57.178 43.478 0.00 0.00 0.00 3.69
699 700 6.239317 CGTAAGATAAATGATGAGGTGGAGGA 60.239 42.308 0.00 0.00 43.02 3.71
700 701 5.928839 CGTAAGATAAATGATGAGGTGGAGG 59.071 44.000 0.00 0.00 43.02 4.30
701 702 6.422100 CACGTAAGATAAATGATGAGGTGGAG 59.578 42.308 0.00 0.00 43.62 3.86
702 703 6.280643 CACGTAAGATAAATGATGAGGTGGA 58.719 40.000 0.00 0.00 43.62 4.02
703 704 5.466728 CCACGTAAGATAAATGATGAGGTGG 59.533 44.000 0.00 0.00 43.62 4.61
704 705 5.050091 GCCACGTAAGATAAATGATGAGGTG 60.050 44.000 0.00 0.00 43.62 4.00
705 706 5.057149 GCCACGTAAGATAAATGATGAGGT 58.943 41.667 0.00 0.00 43.62 3.85
706 707 5.056480 TGCCACGTAAGATAAATGATGAGG 58.944 41.667 0.00 0.00 43.62 3.86
707 708 6.791887 ATGCCACGTAAGATAAATGATGAG 57.208 37.500 0.00 0.00 43.62 2.90
708 709 7.566760 AAATGCCACGTAAGATAAATGATGA 57.433 32.000 0.00 0.00 43.62 2.92
709 710 8.633075 AAAAATGCCACGTAAGATAAATGATG 57.367 30.769 0.00 0.00 43.62 3.07
711 712 9.781834 CTTAAAAATGCCACGTAAGATAAATGA 57.218 29.630 0.00 0.00 43.62 2.57
712 713 9.781834 TCTTAAAAATGCCACGTAAGATAAATG 57.218 29.630 0.00 0.00 43.62 2.32
717 718 8.958119 TCTATCTTAAAAATGCCACGTAAGAT 57.042 30.769 8.86 8.86 41.82 2.40
718 719 8.662141 GTTCTATCTTAAAAATGCCACGTAAGA 58.338 33.333 0.00 0.00 43.62 2.10
720 721 7.390996 TGGTTCTATCTTAAAAATGCCACGTAA 59.609 33.333 0.00 0.00 0.00 3.18
721 722 6.879993 TGGTTCTATCTTAAAAATGCCACGTA 59.120 34.615 0.00 0.00 0.00 3.57
722 723 5.708230 TGGTTCTATCTTAAAAATGCCACGT 59.292 36.000 0.00 0.00 0.00 4.49
723 724 6.189677 TGGTTCTATCTTAAAAATGCCACG 57.810 37.500 0.00 0.00 0.00 4.94
724 725 8.034804 ACAATGGTTCTATCTTAAAAATGCCAC 58.965 33.333 0.00 0.00 0.00 5.01
725 726 8.133024 ACAATGGTTCTATCTTAAAAATGCCA 57.867 30.769 0.00 0.00 0.00 4.92
726 727 9.516314 GTACAATGGTTCTATCTTAAAAATGCC 57.484 33.333 0.00 0.00 0.00 4.40
731 732 8.682710 GGCATGTACAATGGTTCTATCTTAAAA 58.317 33.333 0.00 0.00 0.00 1.52
732 733 7.284489 GGGCATGTACAATGGTTCTATCTTAAA 59.716 37.037 0.00 0.00 0.00 1.52
733 734 6.770785 GGGCATGTACAATGGTTCTATCTTAA 59.229 38.462 0.00 0.00 0.00 1.85
734 735 6.101150 AGGGCATGTACAATGGTTCTATCTTA 59.899 38.462 0.00 0.00 0.00 2.10
735 736 5.103940 AGGGCATGTACAATGGTTCTATCTT 60.104 40.000 0.00 0.00 0.00 2.40
736 737 4.413520 AGGGCATGTACAATGGTTCTATCT 59.586 41.667 0.00 0.00 0.00 1.98
737 738 4.718961 AGGGCATGTACAATGGTTCTATC 58.281 43.478 0.00 0.00 0.00 2.08
738 739 4.796110 AGGGCATGTACAATGGTTCTAT 57.204 40.909 0.00 0.00 0.00 1.98
739 740 4.584638 AAGGGCATGTACAATGGTTCTA 57.415 40.909 0.00 0.00 0.00 2.10
740 741 3.456380 AAGGGCATGTACAATGGTTCT 57.544 42.857 0.00 0.00 0.00 3.01
741 742 4.278419 GGATAAGGGCATGTACAATGGTTC 59.722 45.833 0.00 0.00 0.00 3.62
742 743 4.079212 AGGATAAGGGCATGTACAATGGTT 60.079 41.667 0.00 0.00 0.00 3.67
743 744 3.463329 AGGATAAGGGCATGTACAATGGT 59.537 43.478 0.00 0.00 0.00 3.55
744 745 3.822735 CAGGATAAGGGCATGTACAATGG 59.177 47.826 0.00 0.00 0.00 3.16
745 746 4.276678 CACAGGATAAGGGCATGTACAATG 59.723 45.833 0.00 0.12 0.00 2.82
746 747 4.079787 ACACAGGATAAGGGCATGTACAAT 60.080 41.667 0.00 0.00 0.00 2.71
747 748 3.265737 ACACAGGATAAGGGCATGTACAA 59.734 43.478 0.00 0.00 0.00 2.41
748 749 2.843730 ACACAGGATAAGGGCATGTACA 59.156 45.455 0.00 0.00 0.00 2.90
749 750 3.560636 ACACAGGATAAGGGCATGTAC 57.439 47.619 0.00 0.00 0.00 2.90
750 751 6.082031 ACTATACACAGGATAAGGGCATGTA 58.918 40.000 0.00 0.00 0.00 2.29
751 752 4.907875 ACTATACACAGGATAAGGGCATGT 59.092 41.667 0.00 0.00 0.00 3.21
752 753 5.489792 ACTATACACAGGATAAGGGCATG 57.510 43.478 0.00 0.00 0.00 4.06
753 754 6.126478 ACAAACTATACACAGGATAAGGGCAT 60.126 38.462 0.00 0.00 0.00 4.40
754 755 5.190925 ACAAACTATACACAGGATAAGGGCA 59.809 40.000 0.00 0.00 0.00 5.36
755 756 5.681639 ACAAACTATACACAGGATAAGGGC 58.318 41.667 0.00 0.00 0.00 5.19
756 757 7.065803 CACAACAAACTATACACAGGATAAGGG 59.934 40.741 0.00 0.00 0.00 3.95
757 758 7.606456 ACACAACAAACTATACACAGGATAAGG 59.394 37.037 0.00 0.00 0.00 2.69
758 759 8.443160 CACACAACAAACTATACACAGGATAAG 58.557 37.037 0.00 0.00 0.00 1.73
759 760 7.389330 CCACACAACAAACTATACACAGGATAA 59.611 37.037 0.00 0.00 0.00 1.75
760 761 6.876789 CCACACAACAAACTATACACAGGATA 59.123 38.462 0.00 0.00 0.00 2.59
761 762 5.705441 CCACACAACAAACTATACACAGGAT 59.295 40.000 0.00 0.00 0.00 3.24
762 763 5.060506 CCACACAACAAACTATACACAGGA 58.939 41.667 0.00 0.00 0.00 3.86
763 764 4.819630 ACCACACAACAAACTATACACAGG 59.180 41.667 0.00 0.00 0.00 4.00
764 765 6.371809 AACCACACAACAAACTATACACAG 57.628 37.500 0.00 0.00 0.00 3.66
765 766 6.761099 AAACCACACAACAAACTATACACA 57.239 33.333 0.00 0.00 0.00 3.72
766 767 7.858879 CCTAAAACCACACAACAAACTATACAC 59.141 37.037 0.00 0.00 0.00 2.90
767 768 7.013464 CCCTAAAACCACACAACAAACTATACA 59.987 37.037 0.00 0.00 0.00 2.29
768 769 7.364970 CCCTAAAACCACACAACAAACTATAC 58.635 38.462 0.00 0.00 0.00 1.47
769 770 6.490721 CCCCTAAAACCACACAACAAACTATA 59.509 38.462 0.00 0.00 0.00 1.31
770 771 5.303333 CCCCTAAAACCACACAACAAACTAT 59.697 40.000 0.00 0.00 0.00 2.12
771 772 4.645588 CCCCTAAAACCACACAACAAACTA 59.354 41.667 0.00 0.00 0.00 2.24
772 773 3.449377 CCCCTAAAACCACACAACAAACT 59.551 43.478 0.00 0.00 0.00 2.66
773 774 3.431068 CCCCCTAAAACCACACAACAAAC 60.431 47.826 0.00 0.00 0.00 2.93
774 775 2.766828 CCCCCTAAAACCACACAACAAA 59.233 45.455 0.00 0.00 0.00 2.83
775 776 2.024273 TCCCCCTAAAACCACACAACAA 60.024 45.455 0.00 0.00 0.00 2.83
776 777 1.569548 TCCCCCTAAAACCACACAACA 59.430 47.619 0.00 0.00 0.00 3.33
777 778 2.235891 CTCCCCCTAAAACCACACAAC 58.764 52.381 0.00 0.00 0.00 3.32
778 779 1.854280 ACTCCCCCTAAAACCACACAA 59.146 47.619 0.00 0.00 0.00 3.33
779 780 1.525175 ACTCCCCCTAAAACCACACA 58.475 50.000 0.00 0.00 0.00 3.72
780 781 2.235891 CAACTCCCCCTAAAACCACAC 58.764 52.381 0.00 0.00 0.00 3.82
781 782 1.854280 ACAACTCCCCCTAAAACCACA 59.146 47.619 0.00 0.00 0.00 4.17
782 783 2.235891 CACAACTCCCCCTAAAACCAC 58.764 52.381 0.00 0.00 0.00 4.16
783 784 1.854280 ACACAACTCCCCCTAAAACCA 59.146 47.619 0.00 0.00 0.00 3.67
784 785 2.670019 ACACAACTCCCCCTAAAACC 57.330 50.000 0.00 0.00 0.00 3.27
785 786 3.491964 GCAAACACAACTCCCCCTAAAAC 60.492 47.826 0.00 0.00 0.00 2.43
786 787 2.696187 GCAAACACAACTCCCCCTAAAA 59.304 45.455 0.00 0.00 0.00 1.52
787 788 2.091555 AGCAAACACAACTCCCCCTAAA 60.092 45.455 0.00 0.00 0.00 1.85
788 789 1.497286 AGCAAACACAACTCCCCCTAA 59.503 47.619 0.00 0.00 0.00 2.69
789 790 1.145571 AGCAAACACAACTCCCCCTA 58.854 50.000 0.00 0.00 0.00 3.53
790 791 0.261696 AAGCAAACACAACTCCCCCT 59.738 50.000 0.00 0.00 0.00 4.79
791 792 1.119684 AAAGCAAACACAACTCCCCC 58.880 50.000 0.00 0.00 0.00 5.40
792 793 2.979814 AAAAGCAAACACAACTCCCC 57.020 45.000 0.00 0.00 0.00 4.81
891 892 1.254570 GAAACGCGATCGCTACGAAAT 59.745 47.619 34.69 15.37 39.99 2.17
922 938 1.134560 GTATGTAGGGATCGATCGGGC 59.865 57.143 18.81 7.43 0.00 6.13
938 954 1.868519 GCCGCGGAAGTAGGAAGTATG 60.869 57.143 33.48 0.00 33.85 2.39
996 1032 5.105752 GTCTTGACGAAGATCTGCATTACT 58.894 41.667 0.51 0.00 40.40 2.24
997 1033 4.268884 GGTCTTGACGAAGATCTGCATTAC 59.731 45.833 0.51 0.00 40.40 1.89
998 1034 4.081697 TGGTCTTGACGAAGATCTGCATTA 60.082 41.667 0.51 0.00 39.73 1.90
1073 1109 1.493950 CTGGATCCGAGCATTGACGC 61.494 60.000 7.39 0.00 0.00 5.19
1080 1116 1.900351 CTTGTCCTGGATCCGAGCA 59.100 57.895 7.39 0.53 0.00 4.26
1119 1158 4.143333 CGCGGGTCGTCTTGGGAT 62.143 66.667 0.00 0.00 0.00 3.85
1368 1595 7.048512 AGAAAACTTAATTAGGACGGAGATGG 58.951 38.462 0.98 0.00 0.00 3.51
1405 1635 4.711355 ACCTGTAAATGAATCAATGGGGTG 59.289 41.667 0.00 0.00 0.00 4.61
1465 1704 1.148273 TGGCCGCACTTCTTCTTGT 59.852 52.632 0.00 0.00 0.00 3.16
1517 1775 9.846248 GCAACAAAAACTCATACTAATCTGAAT 57.154 29.630 0.00 0.00 0.00 2.57
1519 1777 7.816640 GGCAACAAAAACTCATACTAATCTGA 58.183 34.615 0.00 0.00 0.00 3.27
1701 2079 0.179023 TGCTGATCACTGGTGCAACA 60.179 50.000 3.40 3.40 39.98 3.33
1702 2080 1.131883 GATGCTGATCACTGGTGCAAC 59.868 52.381 10.23 0.00 37.20 4.17
1703 2081 1.003928 AGATGCTGATCACTGGTGCAA 59.996 47.619 10.23 0.00 37.20 4.08
1757 3636 1.402968 CATTATGAGGCAAAGCGCACT 59.597 47.619 11.47 0.00 45.17 4.40
1794 3678 7.226325 CCTTGGAATGCTGACATTAAAAACAAA 59.774 33.333 0.00 0.00 46.59 2.83
1797 3683 6.366061 GTCCTTGGAATGCTGACATTAAAAAC 59.634 38.462 0.00 0.00 46.59 2.43
1808 3696 1.734465 GAGAACGTCCTTGGAATGCTG 59.266 52.381 0.00 0.00 0.00 4.41
1852 3745 7.307694 TGCATCAGAATTTGTAAAGTCATGTC 58.692 34.615 7.43 0.00 35.60 3.06
2063 3983 3.119531 TGCAGTTCTTTTGTGTTGAGTGG 60.120 43.478 0.00 0.00 0.00 4.00
2071 3991 8.411318 ACTATTTTCTTTGCAGTTCTTTTGTG 57.589 30.769 0.00 0.00 0.00 3.33
2095 4015 3.609853 TGGACCATGCTCATTTCACTAC 58.390 45.455 0.00 0.00 0.00 2.73
2097 4017 2.885135 TGGACCATGCTCATTTCACT 57.115 45.000 0.00 0.00 0.00 3.41
2098 4018 3.777478 CATTGGACCATGCTCATTTCAC 58.223 45.455 0.00 0.00 0.00 3.18
2099 4019 2.166870 GCATTGGACCATGCTCATTTCA 59.833 45.455 16.90 0.00 40.41 2.69
2130 4050 4.640805 AAACACGCGTACAATAGAAGTG 57.359 40.909 13.44 0.00 0.00 3.16
2131 4051 5.662211 AAAAACACGCGTACAATAGAAGT 57.338 34.783 13.44 0.00 0.00 3.01
2165 4085 4.625972 TTTCTTCCTTTGTGTTTCCGAC 57.374 40.909 0.00 0.00 0.00 4.79
2168 4088 8.887036 AACATATTTTCTTCCTTTGTGTTTCC 57.113 30.769 0.00 0.00 0.00 3.13
2170 4090 9.883142 TCAAACATATTTTCTTCCTTTGTGTTT 57.117 25.926 0.00 0.00 37.64 2.83
2206 4126 7.255277 GGAAGCCATCATCTTCTAAAACATACC 60.255 40.741 0.00 0.00 39.75 2.73
2207 4127 7.500559 AGGAAGCCATCATCTTCTAAAACATAC 59.499 37.037 0.00 0.00 39.75 2.39
2256 4178 7.066284 CGATTCATCTTCCAAGGTTCAGTAAAT 59.934 37.037 0.00 0.00 0.00 1.40
2258 4180 5.874810 CGATTCATCTTCCAAGGTTCAGTAA 59.125 40.000 0.00 0.00 0.00 2.24
2272 4194 5.446860 TCTACTGTACCTCCGATTCATCTT 58.553 41.667 0.00 0.00 0.00 2.40
2323 4245 4.278170 CAGTGTTGTACATGGTGTGGAAAT 59.722 41.667 0.00 0.00 0.00 2.17
2325 4247 3.118223 TCAGTGTTGTACATGGTGTGGAA 60.118 43.478 0.00 0.00 0.00 3.53
2344 4270 2.685388 TGATCCACGAGTAGCTTCTCAG 59.315 50.000 19.00 13.77 34.46 3.35
2354 4280 3.006967 ACTTGTAAGCTTGATCCACGAGT 59.993 43.478 9.86 11.06 32.82 4.18
2361 4287 7.042051 TCACTGTTGTAACTTGTAAGCTTGATC 60.042 37.037 9.86 0.10 0.00 2.92
2373 4299 5.356751 TGTTCAATGCTCACTGTTGTAACTT 59.643 36.000 0.00 0.00 0.00 2.66
2374 4300 4.881273 TGTTCAATGCTCACTGTTGTAACT 59.119 37.500 0.00 0.00 0.00 2.24
2375 4301 5.168526 TGTTCAATGCTCACTGTTGTAAC 57.831 39.130 0.00 0.00 0.00 2.50
2376 4302 5.826601 TTGTTCAATGCTCACTGTTGTAA 57.173 34.783 0.00 0.00 0.00 2.41
2377 4303 5.530543 TGATTGTTCAATGCTCACTGTTGTA 59.469 36.000 2.63 0.00 0.00 2.41
2378 4304 4.338964 TGATTGTTCAATGCTCACTGTTGT 59.661 37.500 2.63 0.00 0.00 3.32
2379 4305 4.862350 TGATTGTTCAATGCTCACTGTTG 58.138 39.130 2.63 0.00 0.00 3.33
2495 4421 9.377312 GCCTAAGTATTGGATGAGATTCTTATC 57.623 37.037 9.40 9.40 0.00 1.75
2498 4424 6.331307 AGGCCTAAGTATTGGATGAGATTCTT 59.669 38.462 1.29 0.00 0.00 2.52
2512 4438 6.252995 TGGTGAATTTTTCAGGCCTAAGTAT 58.747 36.000 3.98 0.00 41.01 2.12
2529 4455 3.527253 TCCCATGAGTACCAATGGTGAAT 59.473 43.478 16.41 0.00 36.19 2.57
2559 4485 9.436957 CTTTCCAGAGCTATTCTTTTTAGTACA 57.563 33.333 0.00 0.00 32.41 2.90
2582 4514 9.247861 AGCAGTGGAGTTATATGAAATTTCTTT 57.752 29.630 18.64 9.15 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.