Multiple sequence alignment - TraesCS2A01G092600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G092600 chr2A 100.000 2213 0 0 1 2213 46107442 46105230 0.000000e+00 4087.0
1 TraesCS2A01G092600 chr2A 86.552 290 32 6 1 290 45485316 45485034 1.930000e-81 313.0
2 TraesCS2A01G092600 chr2A 100.000 153 0 0 2427 2579 46105016 46104864 1.510000e-72 283.0
3 TraesCS2A01G092600 chr2A 95.455 66 2 1 548 613 46106858 46106794 1.260000e-18 104.0
4 TraesCS2A01G092600 chr3A 92.716 1263 91 1 950 2211 711261705 711262967 0.000000e+00 1821.0
5 TraesCS2A01G092600 chr3A 94.771 153 8 0 2427 2579 711263234 711263386 3.320000e-59 239.0
6 TraesCS2A01G092600 chr1A 90.923 1344 105 2 871 2213 491304628 491305955 0.000000e+00 1790.0
7 TraesCS2A01G092600 chr1A 92.593 864 63 1 877 1739 573906123 573906986 0.000000e+00 1240.0
8 TraesCS2A01G092600 chr1A 91.458 480 41 0 1734 2213 573915583 573916062 0.000000e+00 660.0
9 TraesCS2A01G092600 chr1A 98.039 153 3 0 2427 2579 573916122 573916274 1.520000e-67 267.0
10 TraesCS2A01G092600 chr1A 95.425 153 7 0 2427 2579 491306008 491306160 7.130000e-61 244.0
11 TraesCS2A01G092600 chr7D 89.264 1332 140 3 884 2213 408463958 408465288 0.000000e+00 1664.0
12 TraesCS2A01G092600 chr7D 90.850 153 14 0 2427 2579 408465347 408465499 3.360000e-49 206.0
13 TraesCS2A01G092600 chr1B 84.758 1345 186 13 879 2213 473230566 473231901 0.000000e+00 1330.0
14 TraesCS2A01G092600 chr1B 91.333 150 13 0 2430 2579 473231961 473232110 3.360000e-49 206.0
15 TraesCS2A01G092600 chr4A 93.395 863 56 1 877 1738 162439225 162438363 0.000000e+00 1277.0
16 TraesCS2A01G092600 chr4A 89.583 480 41 2 1734 2213 162432247 162431777 3.670000e-168 601.0
17 TraesCS2A01G092600 chr4A 94.667 150 8 0 2430 2579 162431710 162431561 1.540000e-57 233.0
18 TraesCS2A01G092600 chr4B 84.262 1239 177 13 879 2106 519504829 519503598 0.000000e+00 1192.0
19 TraesCS2A01G092600 chr5D 81.387 1053 182 9 899 1942 317450470 317449423 0.000000e+00 846.0
20 TraesCS2A01G092600 chr2B 77.803 1347 279 14 877 2213 141164506 141163170 0.000000e+00 813.0
21 TraesCS2A01G092600 chr2B 86.337 344 42 5 1 342 68362604 68362264 1.130000e-98 370.0
22 TraesCS2A01G092600 chr2D 92.090 354 22 4 225 575 43738607 43738257 6.410000e-136 494.0
23 TraesCS2A01G092600 chr2D 90.336 238 20 2 1 237 43739918 43739683 2.490000e-80 309.0
24 TraesCS2A01G092600 chr2D 89.381 226 11 8 614 827 43738291 43738067 3.270000e-69 272.0
25 TraesCS2A01G092600 chr6B 78.182 165 26 8 2054 2213 26392753 26392912 2.110000e-16 97.1
26 TraesCS2A01G092600 chr3B 92.308 52 4 0 2146 2197 815980337 815980286 9.900000e-10 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G092600 chr2A 46104864 46107442 2578 True 1491.333333 4087 98.485000 1 2579 3 chr2A.!!$R2 2578
1 TraesCS2A01G092600 chr3A 711261705 711263386 1681 False 1030.000000 1821 93.743500 950 2579 2 chr3A.!!$F1 1629
2 TraesCS2A01G092600 chr1A 573906123 573906986 863 False 1240.000000 1240 92.593000 877 1739 1 chr1A.!!$F1 862
3 TraesCS2A01G092600 chr1A 491304628 491306160 1532 False 1017.000000 1790 93.174000 871 2579 2 chr1A.!!$F2 1708
4 TraesCS2A01G092600 chr1A 573915583 573916274 691 False 463.500000 660 94.748500 1734 2579 2 chr1A.!!$F3 845
5 TraesCS2A01G092600 chr7D 408463958 408465499 1541 False 935.000000 1664 90.057000 884 2579 2 chr7D.!!$F1 1695
6 TraesCS2A01G092600 chr1B 473230566 473232110 1544 False 768.000000 1330 88.045500 879 2579 2 chr1B.!!$F1 1700
7 TraesCS2A01G092600 chr4A 162438363 162439225 862 True 1277.000000 1277 93.395000 877 1738 1 chr4A.!!$R1 861
8 TraesCS2A01G092600 chr4A 162431561 162432247 686 True 417.000000 601 92.125000 1734 2579 2 chr4A.!!$R2 845
9 TraesCS2A01G092600 chr4B 519503598 519504829 1231 True 1192.000000 1192 84.262000 879 2106 1 chr4B.!!$R1 1227
10 TraesCS2A01G092600 chr5D 317449423 317450470 1047 True 846.000000 846 81.387000 899 1942 1 chr5D.!!$R1 1043
11 TraesCS2A01G092600 chr2B 141163170 141164506 1336 True 813.000000 813 77.803000 877 2213 1 chr2B.!!$R2 1336
12 TraesCS2A01G092600 chr2D 43738067 43739918 1851 True 358.333333 494 90.602333 1 827 3 chr2D.!!$R1 826

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
848 849 0.035343 GCAACCTAGGTCCTTCCACC 60.035 60.0 16.64 0.0 39.02 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1917 2766 0.468226 TGTTTCAGAGGGCTTGTCGT 59.532 50.0 0.0 0.0 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.298103 AGGCATCTCAGACAACAAGATT 57.702 40.909 0.00 0.00 0.00 2.40
55 56 4.756642 TCAGACAACAAGATTGACATGGAC 59.243 41.667 0.00 0.00 0.00 4.02
76 77 0.320697 TCGTCGAGTCTGTCAGGAGA 59.679 55.000 0.00 0.00 0.00 3.71
82 83 2.017049 GAGTCTGTCAGGAGAGAGCTC 58.983 57.143 5.27 5.27 40.54 4.09
114 115 3.920231 CTTCCAGGTGAAGGATGATGA 57.080 47.619 0.00 0.00 45.66 2.92
126 127 1.539929 GGATGATGAGCTTCTGTCCCG 60.540 57.143 0.00 0.00 0.00 5.14
133 134 3.646715 CTTCTGTCCCGGGGGCAA 61.647 66.667 22.81 6.87 34.68 4.52
134 135 2.938798 TTCTGTCCCGGGGGCAAT 60.939 61.111 22.81 0.00 34.68 3.56
148 149 1.154035 GCAATTGGAAGGCGAACCG 60.154 57.895 7.72 0.00 42.76 4.44
150 151 1.074248 AATTGGAAGGCGAACCGGT 59.926 52.632 0.00 0.00 42.76 5.28
165 166 3.590824 GGTGGCCGACAGAAATGG 58.409 61.111 0.00 0.00 0.00 3.16
179 180 4.240881 AGAAATGGCTTCTGCATCCTTA 57.759 40.909 0.00 0.00 43.09 2.69
193 194 0.978146 TCCTTAGCCTGCTGAGGTCC 60.978 60.000 24.23 0.00 46.29 4.46
205 206 3.053320 TGCTGAGGTCCAAGATAGAGAGA 60.053 47.826 0.00 0.00 0.00 3.10
209 210 4.017958 TGAGGTCCAAGATAGAGAGACTGT 60.018 45.833 0.00 0.00 0.00 3.55
210 211 4.532834 AGGTCCAAGATAGAGAGACTGTC 58.467 47.826 0.00 0.00 37.07 3.51
229 230 3.840078 TGTCTCATGGTTTCATCTCCTCA 59.160 43.478 0.00 0.00 0.00 3.86
234 235 3.199442 TGGTTTCATCTCCTCAGGGTA 57.801 47.619 0.00 0.00 0.00 3.69
235 236 3.107601 TGGTTTCATCTCCTCAGGGTAG 58.892 50.000 0.00 0.00 0.00 3.18
236 237 3.108376 GGTTTCATCTCCTCAGGGTAGT 58.892 50.000 0.00 0.00 0.00 2.73
238 239 4.019231 GGTTTCATCTCCTCAGGGTAGTTT 60.019 45.833 0.00 0.00 0.00 2.66
239 240 4.826274 TTCATCTCCTCAGGGTAGTTTG 57.174 45.455 0.00 0.00 0.00 2.93
240 241 3.107601 TCATCTCCTCAGGGTAGTTTGG 58.892 50.000 0.00 0.00 0.00 3.28
241 242 1.276622 TCTCCTCAGGGTAGTTTGGC 58.723 55.000 0.00 0.00 0.00 4.52
242 243 1.203313 TCTCCTCAGGGTAGTTTGGCT 60.203 52.381 0.00 0.00 0.00 4.75
243 244 0.984230 TCCTCAGGGTAGTTTGGCTG 59.016 55.000 0.00 0.00 0.00 4.85
244 245 0.693049 CCTCAGGGTAGTTTGGCTGT 59.307 55.000 0.00 0.00 0.00 4.40
245 246 1.073923 CCTCAGGGTAGTTTGGCTGTT 59.926 52.381 0.00 0.00 0.00 3.16
247 248 2.554032 CTCAGGGTAGTTTGGCTGTTTG 59.446 50.000 0.00 0.00 0.00 2.93
248 249 1.613437 CAGGGTAGTTTGGCTGTTTGG 59.387 52.381 0.00 0.00 0.00 3.28
249 250 0.317160 GGGTAGTTTGGCTGTTTGGC 59.683 55.000 0.00 0.00 42.18 4.52
250 251 1.328279 GGTAGTTTGGCTGTTTGGCT 58.672 50.000 0.00 0.00 42.34 4.75
251 252 1.269723 GGTAGTTTGGCTGTTTGGCTC 59.730 52.381 0.00 0.00 42.34 4.70
253 254 1.035139 AGTTTGGCTGTTTGGCTCTG 58.965 50.000 0.00 0.00 42.34 3.35
254 255 0.746659 GTTTGGCTGTTTGGCTCTGT 59.253 50.000 0.00 0.00 42.34 3.41
255 256 0.746063 TTTGGCTGTTTGGCTCTGTG 59.254 50.000 0.00 0.00 42.34 3.66
257 258 0.106769 TGGCTGTTTGGCTCTGTGAA 60.107 50.000 0.00 0.00 42.34 3.18
259 260 1.068055 GGCTGTTTGGCTCTGTGAATG 60.068 52.381 0.00 0.00 38.32 2.67
261 262 2.606308 GCTGTTTGGCTCTGTGAATGTG 60.606 50.000 0.00 0.00 0.00 3.21
262 263 2.880268 CTGTTTGGCTCTGTGAATGTGA 59.120 45.455 0.00 0.00 0.00 3.58
263 264 3.489355 TGTTTGGCTCTGTGAATGTGAT 58.511 40.909 0.00 0.00 0.00 3.06
264 265 3.253921 TGTTTGGCTCTGTGAATGTGATG 59.746 43.478 0.00 0.00 0.00 3.07
265 266 2.118313 TGGCTCTGTGAATGTGATGG 57.882 50.000 0.00 0.00 0.00 3.51
266 267 1.352017 TGGCTCTGTGAATGTGATGGT 59.648 47.619 0.00 0.00 0.00 3.55
267 268 2.224843 TGGCTCTGTGAATGTGATGGTT 60.225 45.455 0.00 0.00 0.00 3.67
268 269 2.821969 GGCTCTGTGAATGTGATGGTTT 59.178 45.455 0.00 0.00 0.00 3.27
269 270 3.256631 GGCTCTGTGAATGTGATGGTTTT 59.743 43.478 0.00 0.00 0.00 2.43
270 271 4.262164 GGCTCTGTGAATGTGATGGTTTTT 60.262 41.667 0.00 0.00 0.00 1.94
284 285 3.302344 TTTTTCTGCGGCCTGGGC 61.302 61.111 10.75 10.75 41.06 5.36
285 286 3.808218 TTTTTCTGCGGCCTGGGCT 62.808 57.895 18.81 0.00 41.60 5.19
301 302 2.359107 CTGCGTGTGGCTGTGGAT 60.359 61.111 0.00 0.00 44.05 3.41
302 303 1.079197 CTGCGTGTGGCTGTGGATA 60.079 57.895 0.00 0.00 44.05 2.59
303 304 1.079197 TGCGTGTGGCTGTGGATAG 60.079 57.895 0.00 0.00 44.05 2.08
304 305 1.079127 GCGTGTGGCTGTGGATAGT 60.079 57.895 0.00 0.00 39.11 2.12
305 306 0.673644 GCGTGTGGCTGTGGATAGTT 60.674 55.000 0.00 0.00 39.11 2.24
306 307 1.808411 CGTGTGGCTGTGGATAGTTT 58.192 50.000 0.00 0.00 0.00 2.66
307 308 1.464608 CGTGTGGCTGTGGATAGTTTG 59.535 52.381 0.00 0.00 0.00 2.93
308 309 2.504367 GTGTGGCTGTGGATAGTTTGT 58.496 47.619 0.00 0.00 0.00 2.83
309 310 2.226437 GTGTGGCTGTGGATAGTTTGTG 59.774 50.000 0.00 0.00 0.00 3.33
310 311 1.812571 GTGGCTGTGGATAGTTTGTGG 59.187 52.381 0.00 0.00 0.00 4.17
311 312 1.423541 TGGCTGTGGATAGTTTGTGGT 59.576 47.619 0.00 0.00 0.00 4.16
312 313 1.812571 GGCTGTGGATAGTTTGTGGTG 59.187 52.381 0.00 0.00 0.00 4.17
313 314 1.200020 GCTGTGGATAGTTTGTGGTGC 59.800 52.381 0.00 0.00 0.00 5.01
314 315 2.503331 CTGTGGATAGTTTGTGGTGCA 58.497 47.619 0.00 0.00 0.00 4.57
315 316 2.226330 TGTGGATAGTTTGTGGTGCAC 58.774 47.619 8.80 8.80 34.11 4.57
316 317 1.196808 GTGGATAGTTTGTGGTGCACG 59.803 52.381 11.45 0.00 37.14 5.34
317 318 1.202710 TGGATAGTTTGTGGTGCACGT 60.203 47.619 11.45 0.00 37.14 4.49
318 319 1.196808 GGATAGTTTGTGGTGCACGTG 59.803 52.381 12.28 12.28 37.14 4.49
319 320 1.871039 GATAGTTTGTGGTGCACGTGT 59.129 47.619 18.38 0.00 37.14 4.49
320 321 1.010580 TAGTTTGTGGTGCACGTGTG 58.989 50.000 18.38 0.00 37.14 3.82
321 322 0.958382 AGTTTGTGGTGCACGTGTGT 60.958 50.000 18.38 0.00 37.14 3.72
330 331 3.101209 CACGTGTGTGCTTGTGCT 58.899 55.556 7.58 0.00 39.67 4.40
331 332 1.297819 CACGTGTGTGCTTGTGCTG 60.298 57.895 7.58 0.00 39.67 4.41
332 333 1.745115 ACGTGTGTGCTTGTGCTGT 60.745 52.632 0.00 0.00 40.48 4.40
333 334 1.305219 ACGTGTGTGCTTGTGCTGTT 61.305 50.000 0.00 0.00 40.48 3.16
334 335 0.179166 CGTGTGTGCTTGTGCTGTTT 60.179 50.000 0.00 0.00 40.48 2.83
335 336 1.063321 CGTGTGTGCTTGTGCTGTTTA 59.937 47.619 0.00 0.00 40.48 2.01
336 337 2.286950 CGTGTGTGCTTGTGCTGTTTAT 60.287 45.455 0.00 0.00 40.48 1.40
337 338 3.059257 CGTGTGTGCTTGTGCTGTTTATA 60.059 43.478 0.00 0.00 40.48 0.98
338 339 4.378356 CGTGTGTGCTTGTGCTGTTTATAT 60.378 41.667 0.00 0.00 40.48 0.86
339 340 5.460646 GTGTGTGCTTGTGCTGTTTATATT 58.539 37.500 0.00 0.00 40.48 1.28
340 341 5.920273 GTGTGTGCTTGTGCTGTTTATATTT 59.080 36.000 0.00 0.00 40.48 1.40
341 342 5.919707 TGTGTGCTTGTGCTGTTTATATTTG 59.080 36.000 0.00 0.00 40.48 2.32
342 343 5.345741 GTGTGCTTGTGCTGTTTATATTTGG 59.654 40.000 0.00 0.00 40.48 3.28
343 344 5.010516 TGTGCTTGTGCTGTTTATATTTGGT 59.989 36.000 0.00 0.00 40.48 3.67
344 345 5.925969 GTGCTTGTGCTGTTTATATTTGGTT 59.074 36.000 0.00 0.00 40.48 3.67
345 346 6.089417 GTGCTTGTGCTGTTTATATTTGGTTC 59.911 38.462 0.00 0.00 40.48 3.62
346 347 5.286082 GCTTGTGCTGTTTATATTTGGTTCG 59.714 40.000 0.00 0.00 36.03 3.95
347 348 6.561737 TTGTGCTGTTTATATTTGGTTCGA 57.438 33.333 0.00 0.00 0.00 3.71
348 349 6.176975 TGTGCTGTTTATATTTGGTTCGAG 57.823 37.500 0.00 0.00 0.00 4.04
349 350 5.028375 GTGCTGTTTATATTTGGTTCGAGC 58.972 41.667 0.00 0.00 0.00 5.03
350 351 4.697828 TGCTGTTTATATTTGGTTCGAGCA 59.302 37.500 0.53 0.00 0.00 4.26
351 352 5.163764 TGCTGTTTATATTTGGTTCGAGCAG 60.164 40.000 0.53 0.00 0.00 4.24
352 353 5.163754 GCTGTTTATATTTGGTTCGAGCAGT 60.164 40.000 0.53 0.00 0.00 4.40
353 354 6.036735 GCTGTTTATATTTGGTTCGAGCAGTA 59.963 38.462 0.53 0.00 0.00 2.74
354 355 7.534085 TGTTTATATTTGGTTCGAGCAGTAG 57.466 36.000 0.53 0.00 0.00 2.57
355 356 6.036735 TGTTTATATTTGGTTCGAGCAGTAGC 59.963 38.462 0.53 0.00 42.56 3.58
356 357 1.739067 ATTTGGTTCGAGCAGTAGCC 58.261 50.000 0.53 0.00 43.56 3.93
357 358 0.394938 TTTGGTTCGAGCAGTAGCCA 59.605 50.000 0.53 0.00 43.56 4.75
358 359 0.037326 TTGGTTCGAGCAGTAGCCAG 60.037 55.000 0.53 0.00 43.56 4.85
359 360 1.153549 GGTTCGAGCAGTAGCCAGG 60.154 63.158 0.53 0.00 43.56 4.45
360 361 1.592223 GTTCGAGCAGTAGCCAGGT 59.408 57.895 0.00 0.00 43.56 4.00
361 362 0.037232 GTTCGAGCAGTAGCCAGGTT 60.037 55.000 0.00 0.00 43.56 3.50
362 363 0.037326 TTCGAGCAGTAGCCAGGTTG 60.037 55.000 0.00 0.00 43.56 3.77
363 364 2.103042 CGAGCAGTAGCCAGGTTGC 61.103 63.158 0.00 0.00 43.56 4.17
364 365 1.746991 GAGCAGTAGCCAGGTTGCC 60.747 63.158 4.41 0.00 43.56 4.52
365 366 2.190488 GAGCAGTAGCCAGGTTGCCT 62.190 60.000 4.41 0.00 43.56 4.75
366 367 1.303643 GCAGTAGCCAGGTTGCCTT 60.304 57.895 0.00 0.00 33.58 4.35
367 368 1.589716 GCAGTAGCCAGGTTGCCTTG 61.590 60.000 0.00 0.00 33.58 3.61
368 369 0.250901 CAGTAGCCAGGTTGCCTTGT 60.251 55.000 0.00 0.00 0.00 3.16
369 370 0.478507 AGTAGCCAGGTTGCCTTGTT 59.521 50.000 0.00 0.00 0.00 2.83
370 371 1.133482 AGTAGCCAGGTTGCCTTGTTT 60.133 47.619 0.00 0.00 0.00 2.83
371 372 1.269723 GTAGCCAGGTTGCCTTGTTTC 59.730 52.381 0.00 0.00 0.00 2.78
372 373 1.115326 AGCCAGGTTGCCTTGTTTCC 61.115 55.000 0.00 0.00 0.00 3.13
373 374 1.115326 GCCAGGTTGCCTTGTTTCCT 61.115 55.000 0.00 0.00 0.00 3.36
374 375 1.413118 CCAGGTTGCCTTGTTTCCTT 58.587 50.000 0.00 0.00 0.00 3.36
375 376 1.762370 CCAGGTTGCCTTGTTTCCTTT 59.238 47.619 0.00 0.00 0.00 3.11
376 377 2.170397 CCAGGTTGCCTTGTTTCCTTTT 59.830 45.455 0.00 0.00 0.00 2.27
377 378 3.370421 CCAGGTTGCCTTGTTTCCTTTTT 60.370 43.478 0.00 0.00 0.00 1.94
378 379 3.871006 CAGGTTGCCTTGTTTCCTTTTTC 59.129 43.478 0.00 0.00 0.00 2.29
379 380 3.774766 AGGTTGCCTTGTTTCCTTTTTCT 59.225 39.130 0.00 0.00 0.00 2.52
380 381 4.959839 AGGTTGCCTTGTTTCCTTTTTCTA 59.040 37.500 0.00 0.00 0.00 2.10
381 382 5.423931 AGGTTGCCTTGTTTCCTTTTTCTAA 59.576 36.000 0.00 0.00 0.00 2.10
382 383 6.070481 AGGTTGCCTTGTTTCCTTTTTCTAAA 60.070 34.615 0.00 0.00 0.00 1.85
383 384 6.257849 GGTTGCCTTGTTTCCTTTTTCTAAAG 59.742 38.462 0.00 0.00 40.38 1.85
384 385 6.783708 TGCCTTGTTTCCTTTTTCTAAAGA 57.216 33.333 0.00 0.00 42.78 2.52
385 386 7.360113 TGCCTTGTTTCCTTTTTCTAAAGAT 57.640 32.000 0.00 0.00 42.78 2.40
386 387 8.472007 TGCCTTGTTTCCTTTTTCTAAAGATA 57.528 30.769 0.00 0.00 42.78 1.98
387 388 8.919145 TGCCTTGTTTCCTTTTTCTAAAGATAA 58.081 29.630 0.00 0.00 42.78 1.75
388 389 9.758651 GCCTTGTTTCCTTTTTCTAAAGATAAA 57.241 29.630 0.00 0.00 42.78 1.40
406 407 9.660180 AAAGATAAATCCTTGTCTCTTCTACAC 57.340 33.333 0.00 0.00 32.28 2.90
407 408 8.367660 AGATAAATCCTTGTCTCTTCTACACA 57.632 34.615 0.00 0.00 27.37 3.72
408 409 8.986991 AGATAAATCCTTGTCTCTTCTACACAT 58.013 33.333 0.00 0.00 27.37 3.21
409 410 8.954950 ATAAATCCTTGTCTCTTCTACACATG 57.045 34.615 0.00 0.00 0.00 3.21
410 411 6.611613 AATCCTTGTCTCTTCTACACATGA 57.388 37.500 0.00 0.00 0.00 3.07
411 412 6.805016 ATCCTTGTCTCTTCTACACATGAT 57.195 37.500 0.00 0.00 0.00 2.45
412 413 7.904558 ATCCTTGTCTCTTCTACACATGATA 57.095 36.000 0.00 0.00 0.00 2.15
413 414 7.101652 TCCTTGTCTCTTCTACACATGATAC 57.898 40.000 0.00 0.00 0.00 2.24
414 415 6.096987 TCCTTGTCTCTTCTACACATGATACC 59.903 42.308 0.00 0.00 0.00 2.73
415 416 6.127338 CCTTGTCTCTTCTACACATGATACCA 60.127 42.308 0.00 0.00 0.00 3.25
416 417 6.456795 TGTCTCTTCTACACATGATACCAG 57.543 41.667 0.00 0.00 0.00 4.00
417 418 5.163509 TGTCTCTTCTACACATGATACCAGC 60.164 44.000 0.00 0.00 0.00 4.85
418 419 5.068460 GTCTCTTCTACACATGATACCAGCT 59.932 44.000 0.00 0.00 0.00 4.24
419 420 5.068329 TCTCTTCTACACATGATACCAGCTG 59.932 44.000 6.78 6.78 0.00 4.24
420 421 4.956075 TCTTCTACACATGATACCAGCTGA 59.044 41.667 17.39 0.00 0.00 4.26
421 422 5.600069 TCTTCTACACATGATACCAGCTGAT 59.400 40.000 17.39 0.00 0.00 2.90
422 423 5.459536 TCTACACATGATACCAGCTGATC 57.540 43.478 17.39 11.91 0.00 2.92
423 424 4.895297 TCTACACATGATACCAGCTGATCA 59.105 41.667 17.39 17.53 36.54 2.92
424 425 3.801698 ACACATGATACCAGCTGATCAC 58.198 45.455 17.39 4.67 34.98 3.06
425 426 3.198417 ACACATGATACCAGCTGATCACA 59.802 43.478 17.39 10.46 34.98 3.58
426 427 4.141551 ACACATGATACCAGCTGATCACAT 60.142 41.667 17.39 12.29 34.98 3.21
427 428 4.820173 CACATGATACCAGCTGATCACATT 59.180 41.667 17.39 0.00 34.98 2.71
428 429 5.298527 CACATGATACCAGCTGATCACATTT 59.701 40.000 17.39 6.08 34.98 2.32
429 430 5.298527 ACATGATACCAGCTGATCACATTTG 59.701 40.000 17.39 13.84 34.98 2.32
430 431 3.628942 TGATACCAGCTGATCACATTTGC 59.371 43.478 17.39 0.00 0.00 3.68
431 432 1.913778 ACCAGCTGATCACATTTGCA 58.086 45.000 17.39 0.00 0.00 4.08
432 433 2.453521 ACCAGCTGATCACATTTGCAT 58.546 42.857 17.39 0.00 0.00 3.96
433 434 2.829720 ACCAGCTGATCACATTTGCATT 59.170 40.909 17.39 0.00 0.00 3.56
434 435 4.018490 ACCAGCTGATCACATTTGCATTA 58.982 39.130 17.39 0.00 0.00 1.90
435 436 4.647853 ACCAGCTGATCACATTTGCATTAT 59.352 37.500 17.39 0.00 0.00 1.28
436 437 5.128171 ACCAGCTGATCACATTTGCATTATT 59.872 36.000 17.39 0.00 0.00 1.40
437 438 5.690409 CCAGCTGATCACATTTGCATTATTC 59.310 40.000 17.39 0.00 0.00 1.75
438 439 6.461092 CCAGCTGATCACATTTGCATTATTCT 60.461 38.462 17.39 0.00 0.00 2.40
439 440 6.637254 CAGCTGATCACATTTGCATTATTCTC 59.363 38.462 8.42 0.00 0.00 2.87
440 441 6.546403 AGCTGATCACATTTGCATTATTCTCT 59.454 34.615 6.65 0.00 0.00 3.10
441 442 6.637254 GCTGATCACATTTGCATTATTCTCTG 59.363 38.462 0.00 0.00 0.00 3.35
442 443 7.634671 TGATCACATTTGCATTATTCTCTGT 57.365 32.000 0.00 0.00 0.00 3.41
443 444 8.058667 TGATCACATTTGCATTATTCTCTGTT 57.941 30.769 0.00 0.00 0.00 3.16
444 445 8.186163 TGATCACATTTGCATTATTCTCTGTTC 58.814 33.333 0.00 0.00 0.00 3.18
445 446 7.451501 TCACATTTGCATTATTCTCTGTTCA 57.548 32.000 0.00 0.00 0.00 3.18
446 447 7.532571 TCACATTTGCATTATTCTCTGTTCAG 58.467 34.615 0.00 0.00 0.00 3.02
447 448 6.750501 CACATTTGCATTATTCTCTGTTCAGG 59.249 38.462 0.00 0.00 0.00 3.86
448 449 6.660521 ACATTTGCATTATTCTCTGTTCAGGA 59.339 34.615 0.00 0.00 0.00 3.86
449 450 7.177216 ACATTTGCATTATTCTCTGTTCAGGAA 59.823 33.333 0.00 3.73 0.00 3.36
450 451 7.707624 TTTGCATTATTCTCTGTTCAGGAAT 57.292 32.000 15.26 15.26 34.59 3.01
451 452 7.707624 TTGCATTATTCTCTGTTCAGGAATT 57.292 32.000 15.77 0.00 32.78 2.17
452 453 7.707624 TGCATTATTCTCTGTTCAGGAATTT 57.292 32.000 15.77 7.17 32.78 1.82
453 454 7.541162 TGCATTATTCTCTGTTCAGGAATTTG 58.459 34.615 15.77 14.64 32.78 2.32
454 455 7.177216 TGCATTATTCTCTGTTCAGGAATTTGT 59.823 33.333 15.77 6.13 32.78 2.83
455 456 8.031277 GCATTATTCTCTGTTCAGGAATTTGTT 58.969 33.333 15.77 2.86 32.78 2.83
456 457 9.565213 CATTATTCTCTGTTCAGGAATTTGTTC 57.435 33.333 15.77 0.00 32.78 3.18
457 458 5.673337 TTCTCTGTTCAGGAATTTGTTCG 57.327 39.130 0.00 0.00 0.00 3.95
458 459 4.703897 TCTCTGTTCAGGAATTTGTTCGT 58.296 39.130 0.00 0.00 0.00 3.85
459 460 5.849510 TCTCTGTTCAGGAATTTGTTCGTA 58.150 37.500 0.00 0.00 0.00 3.43
460 461 6.464222 TCTCTGTTCAGGAATTTGTTCGTAT 58.536 36.000 0.00 0.00 0.00 3.06
461 462 6.934645 TCTCTGTTCAGGAATTTGTTCGTATT 59.065 34.615 0.00 0.00 0.00 1.89
462 463 6.898041 TCTGTTCAGGAATTTGTTCGTATTG 58.102 36.000 0.00 0.00 0.00 1.90
463 464 6.708502 TCTGTTCAGGAATTTGTTCGTATTGA 59.291 34.615 0.00 0.00 0.00 2.57
464 465 6.898041 TGTTCAGGAATTTGTTCGTATTGAG 58.102 36.000 0.00 0.00 0.00 3.02
465 466 6.072728 TGTTCAGGAATTTGTTCGTATTGAGG 60.073 38.462 0.00 0.00 0.00 3.86
466 467 5.800296 TCAGGAATTTGTTCGTATTGAGGA 58.200 37.500 0.00 0.00 0.00 3.71
467 468 6.234920 TCAGGAATTTGTTCGTATTGAGGAA 58.765 36.000 0.00 0.00 0.00 3.36
468 469 6.712998 TCAGGAATTTGTTCGTATTGAGGAAA 59.287 34.615 0.00 0.00 31.54 3.13
469 470 7.229707 TCAGGAATTTGTTCGTATTGAGGAAAA 59.770 33.333 0.00 0.00 31.54 2.29
470 471 8.028938 CAGGAATTTGTTCGTATTGAGGAAAAT 58.971 33.333 0.00 0.00 31.54 1.82
471 472 8.585018 AGGAATTTGTTCGTATTGAGGAAAATT 58.415 29.630 0.00 0.00 32.21 1.82
472 473 9.849166 GGAATTTGTTCGTATTGAGGAAAATTA 57.151 29.630 0.00 0.00 30.91 1.40
476 477 9.834628 TTTGTTCGTATTGAGGAAAATTATCAC 57.165 29.630 0.00 0.00 31.54 3.06
477 478 8.554835 TGTTCGTATTGAGGAAAATTATCACA 57.445 30.769 0.00 0.00 31.54 3.58
478 479 9.173021 TGTTCGTATTGAGGAAAATTATCACAT 57.827 29.630 0.00 0.00 31.54 3.21
529 530 7.259290 AGCAATTATTATGTTTAGGGTCACG 57.741 36.000 0.00 0.00 0.00 4.35
530 531 5.912955 GCAATTATTATGTTTAGGGTCACGC 59.087 40.000 0.00 0.00 0.00 5.34
531 532 5.917541 ATTATTATGTTTAGGGTCACGCG 57.082 39.130 3.53 3.53 0.00 6.01
532 533 1.361793 TTATGTTTAGGGTCACGCGC 58.638 50.000 5.73 0.00 0.00 6.86
533 534 0.460635 TATGTTTAGGGTCACGCGCC 60.461 55.000 5.73 0.00 0.00 6.53
534 535 2.047560 GTTTAGGGTCACGCGCCT 60.048 61.111 5.73 7.21 0.00 5.52
535 536 1.670083 GTTTAGGGTCACGCGCCTT 60.670 57.895 5.73 0.00 0.00 4.35
536 537 1.375013 TTTAGGGTCACGCGCCTTC 60.375 57.895 5.73 0.00 0.00 3.46
537 538 1.823169 TTTAGGGTCACGCGCCTTCT 61.823 55.000 5.73 0.00 0.00 2.85
538 539 1.823169 TTAGGGTCACGCGCCTTCTT 61.823 55.000 5.73 0.00 0.00 2.52
539 540 1.823169 TAGGGTCACGCGCCTTCTTT 61.823 55.000 5.73 0.00 0.00 2.52
540 541 2.258726 GGGTCACGCGCCTTCTTTT 61.259 57.895 5.73 0.00 0.00 2.27
541 542 0.952010 GGGTCACGCGCCTTCTTTTA 60.952 55.000 5.73 0.00 0.00 1.52
542 543 0.869730 GGTCACGCGCCTTCTTTTAA 59.130 50.000 5.73 0.00 0.00 1.52
543 544 1.264826 GGTCACGCGCCTTCTTTTAAA 59.735 47.619 5.73 0.00 0.00 1.52
544 545 2.287129 GGTCACGCGCCTTCTTTTAAAA 60.287 45.455 5.73 0.00 0.00 1.52
545 546 3.561503 GTCACGCGCCTTCTTTTAAAAT 58.438 40.909 5.73 0.00 0.00 1.82
546 547 3.360758 GTCACGCGCCTTCTTTTAAAATG 59.639 43.478 5.73 0.00 0.00 2.32
547 548 3.251245 TCACGCGCCTTCTTTTAAAATGA 59.749 39.130 5.73 0.00 0.00 2.57
548 549 3.978217 CACGCGCCTTCTTTTAAAATGAA 59.022 39.130 5.73 6.83 0.00 2.57
549 550 4.442733 CACGCGCCTTCTTTTAAAATGAAA 59.557 37.500 5.73 0.00 0.00 2.69
550 551 5.044558 ACGCGCCTTCTTTTAAAATGAAAA 58.955 33.333 5.73 0.00 0.00 2.29
551 552 5.694458 ACGCGCCTTCTTTTAAAATGAAAAT 59.306 32.000 5.73 0.00 0.00 1.82
552 553 6.864165 ACGCGCCTTCTTTTAAAATGAAAATA 59.136 30.769 5.73 0.00 0.00 1.40
553 554 7.382759 ACGCGCCTTCTTTTAAAATGAAAATAA 59.617 29.630 5.73 0.00 0.00 1.40
554 555 8.217778 CGCGCCTTCTTTTAAAATGAAAATAAA 58.782 29.630 0.00 0.00 0.00 1.40
555 556 9.528847 GCGCCTTCTTTTAAAATGAAAATAAAG 57.471 29.630 0.09 0.00 0.00 1.85
565 566 7.977789 AAAATGAAAATAAAGAATTGGCGGT 57.022 28.000 0.00 0.00 0.00 5.68
567 568 9.495572 AAAATGAAAATAAAGAATTGGCGGTAA 57.504 25.926 0.00 0.00 0.00 2.85
568 569 8.474006 AATGAAAATAAAGAATTGGCGGTAAC 57.526 30.769 0.00 0.00 0.00 2.50
569 570 6.982852 TGAAAATAAAGAATTGGCGGTAACA 58.017 32.000 0.00 0.00 0.00 2.41
570 571 6.864165 TGAAAATAAAGAATTGGCGGTAACAC 59.136 34.615 0.00 0.00 0.00 3.32
571 572 6.584185 AAATAAAGAATTGGCGGTAACACT 57.416 33.333 0.00 0.00 0.00 3.55
572 573 7.690952 AAATAAAGAATTGGCGGTAACACTA 57.309 32.000 0.00 0.00 0.00 2.74
573 574 6.673154 ATAAAGAATTGGCGGTAACACTAC 57.327 37.500 0.00 0.00 0.00 2.73
574 575 3.688694 AGAATTGGCGGTAACACTACA 57.311 42.857 0.00 0.00 0.00 2.74
575 576 3.332034 AGAATTGGCGGTAACACTACAC 58.668 45.455 0.00 0.00 0.00 2.90
576 577 2.843401 ATTGGCGGTAACACTACACA 57.157 45.000 0.00 0.00 0.00 3.72
577 578 2.616634 TTGGCGGTAACACTACACAA 57.383 45.000 0.00 0.00 0.00 3.33
578 579 2.616634 TGGCGGTAACACTACACAAA 57.383 45.000 0.00 0.00 0.00 2.83
579 580 3.128852 TGGCGGTAACACTACACAAAT 57.871 42.857 0.00 0.00 0.00 2.32
580 581 2.809119 TGGCGGTAACACTACACAAATG 59.191 45.455 0.00 0.00 0.00 2.32
581 582 3.068560 GGCGGTAACACTACACAAATGA 58.931 45.455 0.00 0.00 0.00 2.57
582 583 3.499157 GGCGGTAACACTACACAAATGAA 59.501 43.478 0.00 0.00 0.00 2.57
583 584 4.023878 GGCGGTAACACTACACAAATGAAA 60.024 41.667 0.00 0.00 0.00 2.69
584 585 5.505985 GGCGGTAACACTACACAAATGAAAA 60.506 40.000 0.00 0.00 0.00 2.29
585 586 5.972382 GCGGTAACACTACACAAATGAAAAA 59.028 36.000 0.00 0.00 0.00 1.94
608 609 4.929819 AAAAAGAATTGGCGGTAACACT 57.070 36.364 0.00 0.00 0.00 3.55
610 611 5.366829 AAAAGAATTGGCGGTAACACTAC 57.633 39.130 0.00 0.00 0.00 2.73
611 612 3.688694 AGAATTGGCGGTAACACTACA 57.311 42.857 0.00 0.00 0.00 2.74
612 613 3.332034 AGAATTGGCGGTAACACTACAC 58.668 45.455 0.00 0.00 0.00 2.90
613 614 2.843401 ATTGGCGGTAACACTACACA 57.157 45.000 0.00 0.00 0.00 3.72
614 615 2.616634 TTGGCGGTAACACTACACAA 57.383 45.000 0.00 0.00 0.00 3.33
615 616 2.616634 TGGCGGTAACACTACACAAA 57.383 45.000 0.00 0.00 0.00 2.83
616 617 3.128852 TGGCGGTAACACTACACAAAT 57.871 42.857 0.00 0.00 0.00 2.32
617 618 2.809119 TGGCGGTAACACTACACAAATG 59.191 45.455 0.00 0.00 0.00 2.32
618 619 3.068560 GGCGGTAACACTACACAAATGA 58.931 45.455 0.00 0.00 0.00 2.57
619 620 3.499157 GGCGGTAACACTACACAAATGAA 59.501 43.478 0.00 0.00 0.00 2.57
620 621 4.023878 GGCGGTAACACTACACAAATGAAA 60.024 41.667 0.00 0.00 0.00 2.69
621 622 5.505985 GGCGGTAACACTACACAAATGAAAA 60.506 40.000 0.00 0.00 0.00 2.29
622 623 5.972382 GCGGTAACACTACACAAATGAAAAA 59.028 36.000 0.00 0.00 0.00 1.94
647 648 6.821031 AAAATAATTGGCGGTAACACTACA 57.179 33.333 0.00 0.00 0.00 2.74
648 649 5.806366 AATAATTGGCGGTAACACTACAC 57.194 39.130 0.00 0.00 0.00 2.90
649 650 2.103537 ATTGGCGGTAACACTACACC 57.896 50.000 0.00 0.00 0.00 4.16
650 651 0.757512 TTGGCGGTAACACTACACCA 59.242 50.000 0.00 0.00 35.23 4.17
651 652 0.319083 TGGCGGTAACACTACACCAG 59.681 55.000 0.00 0.00 33.23 4.00
652 653 0.319405 GGCGGTAACACTACACCAGT 59.681 55.000 0.00 0.00 38.32 4.00
653 654 1.545582 GGCGGTAACACTACACCAGTA 59.454 52.381 0.00 0.00 34.98 2.74
654 655 2.599659 GCGGTAACACTACACCAGTAC 58.400 52.381 0.00 0.00 34.98 2.73
655 656 2.672195 GCGGTAACACTACACCAGTACC 60.672 54.545 0.00 0.00 34.98 3.34
656 657 2.557924 CGGTAACACTACACCAGTACCA 59.442 50.000 0.00 0.00 34.30 3.25
657 658 3.366679 CGGTAACACTACACCAGTACCAG 60.367 52.174 0.00 0.00 34.30 4.00
658 659 2.833631 AACACTACACCAGTACCAGC 57.166 50.000 0.00 0.00 34.98 4.85
659 660 0.974383 ACACTACACCAGTACCAGCC 59.026 55.000 0.00 0.00 34.98 4.85
660 661 0.973632 CACTACACCAGTACCAGCCA 59.026 55.000 0.00 0.00 34.98 4.75
661 662 1.555075 CACTACACCAGTACCAGCCAT 59.445 52.381 0.00 0.00 34.98 4.40
662 663 1.555075 ACTACACCAGTACCAGCCATG 59.445 52.381 0.00 0.00 34.98 3.66
663 664 1.555075 CTACACCAGTACCAGCCATGT 59.445 52.381 0.00 0.00 0.00 3.21
664 665 0.771127 ACACCAGTACCAGCCATGTT 59.229 50.000 0.00 0.00 0.00 2.71
665 666 1.167851 CACCAGTACCAGCCATGTTG 58.832 55.000 0.00 0.00 0.00 3.33
666 667 0.771127 ACCAGTACCAGCCATGTTGT 59.229 50.000 0.00 0.00 0.00 3.32
667 668 1.144913 ACCAGTACCAGCCATGTTGTT 59.855 47.619 0.00 0.00 0.00 2.83
668 669 2.238521 CCAGTACCAGCCATGTTGTTT 58.761 47.619 0.00 0.00 0.00 2.83
669 670 2.030007 CCAGTACCAGCCATGTTGTTTG 60.030 50.000 0.00 0.00 0.00 2.93
670 671 2.884012 CAGTACCAGCCATGTTGTTTGA 59.116 45.455 0.00 0.00 0.00 2.69
671 672 3.507233 CAGTACCAGCCATGTTGTTTGAT 59.493 43.478 0.00 0.00 0.00 2.57
672 673 4.022068 CAGTACCAGCCATGTTGTTTGATT 60.022 41.667 0.00 0.00 0.00 2.57
673 674 5.182950 CAGTACCAGCCATGTTGTTTGATTA 59.817 40.000 0.00 0.00 0.00 1.75
674 675 4.789012 ACCAGCCATGTTGTTTGATTAG 57.211 40.909 0.00 0.00 0.00 1.73
675 676 4.406456 ACCAGCCATGTTGTTTGATTAGA 58.594 39.130 0.00 0.00 0.00 2.10
676 677 4.460382 ACCAGCCATGTTGTTTGATTAGAG 59.540 41.667 0.00 0.00 0.00 2.43
677 678 4.701651 CCAGCCATGTTGTTTGATTAGAGA 59.298 41.667 0.00 0.00 0.00 3.10
678 679 5.359009 CCAGCCATGTTGTTTGATTAGAGAT 59.641 40.000 0.00 0.00 0.00 2.75
679 680 6.543465 CCAGCCATGTTGTTTGATTAGAGATA 59.457 38.462 0.00 0.00 0.00 1.98
680 681 7.412853 CAGCCATGTTGTTTGATTAGAGATAC 58.587 38.462 0.00 0.00 0.00 2.24
681 682 7.281774 CAGCCATGTTGTTTGATTAGAGATACT 59.718 37.037 0.00 0.00 0.00 2.12
682 683 8.486210 AGCCATGTTGTTTGATTAGAGATACTA 58.514 33.333 0.00 0.00 0.00 1.82
683 684 9.109393 GCCATGTTGTTTGATTAGAGATACTAA 57.891 33.333 0.00 0.00 43.89 2.24
704 705 8.585189 ACTAAGTTATTAACTATGCGTTAGGC 57.415 34.615 9.43 0.00 41.91 3.93
718 719 5.837586 GCGTTAGGCATTCAATTCAAAAA 57.162 34.783 0.00 0.00 42.87 1.94
778 779 7.593875 TTTTTCTCGGGCATCAATAAATTTG 57.406 32.000 0.00 0.00 0.00 2.32
779 780 4.916983 TCTCGGGCATCAATAAATTTGG 57.083 40.909 0.00 0.00 0.00 3.28
780 781 4.277476 TCTCGGGCATCAATAAATTTGGT 58.723 39.130 0.00 0.00 0.00 3.67
781 782 5.441500 TCTCGGGCATCAATAAATTTGGTA 58.558 37.500 0.00 0.00 0.00 3.25
782 783 5.888724 TCTCGGGCATCAATAAATTTGGTAA 59.111 36.000 0.00 0.00 0.00 2.85
783 784 5.897050 TCGGGCATCAATAAATTTGGTAAC 58.103 37.500 0.00 0.00 0.00 2.50
784 785 5.047188 CGGGCATCAATAAATTTGGTAACC 58.953 41.667 0.00 0.00 0.00 2.85
785 786 5.394663 CGGGCATCAATAAATTTGGTAACCA 60.395 40.000 0.00 0.00 0.00 3.67
786 787 5.815222 GGGCATCAATAAATTTGGTAACCAC 59.185 40.000 0.00 0.00 30.78 4.16
787 788 5.518487 GGCATCAATAAATTTGGTAACCACG 59.482 40.000 0.00 0.00 30.78 4.94
788 789 5.518487 GCATCAATAAATTTGGTAACCACGG 59.482 40.000 0.00 0.00 30.78 4.94
789 790 6.626302 CATCAATAAATTTGGTAACCACGGT 58.374 36.000 0.00 0.00 30.78 4.83
790 791 7.628794 GCATCAATAAATTTGGTAACCACGGTA 60.629 37.037 0.00 0.00 30.78 4.02
791 792 7.756395 TCAATAAATTTGGTAACCACGGTAA 57.244 32.000 0.00 0.00 30.78 2.85
792 793 7.592051 TCAATAAATTTGGTAACCACGGTAAC 58.408 34.615 0.00 0.00 30.78 2.50
793 794 7.447853 TCAATAAATTTGGTAACCACGGTAACT 59.552 33.333 0.00 0.00 30.78 2.24
794 795 5.441709 AAATTTGGTAACCACGGTAACTG 57.558 39.130 0.00 0.00 30.78 3.16
795 796 3.834489 TTTGGTAACCACGGTAACTGA 57.166 42.857 0.00 0.00 30.78 3.41
796 797 3.834489 TTGGTAACCACGGTAACTGAA 57.166 42.857 0.00 0.00 30.78 3.02
797 798 3.834489 TGGTAACCACGGTAACTGAAA 57.166 42.857 0.00 0.00 0.00 2.69
798 799 4.148128 TGGTAACCACGGTAACTGAAAA 57.852 40.909 0.00 0.00 0.00 2.29
799 800 4.716794 TGGTAACCACGGTAACTGAAAAT 58.283 39.130 0.00 0.00 0.00 1.82
800 801 5.131784 TGGTAACCACGGTAACTGAAAATT 58.868 37.500 0.00 0.00 0.00 1.82
801 802 5.593502 TGGTAACCACGGTAACTGAAAATTT 59.406 36.000 0.00 0.00 0.00 1.82
802 803 6.096564 TGGTAACCACGGTAACTGAAAATTTT 59.903 34.615 2.28 2.28 0.00 1.82
803 804 6.418523 GGTAACCACGGTAACTGAAAATTTTG 59.581 38.462 8.47 0.00 0.00 2.44
804 805 5.838531 ACCACGGTAACTGAAAATTTTGA 57.161 34.783 8.47 0.00 0.00 2.69
805 806 5.827666 ACCACGGTAACTGAAAATTTTGAG 58.172 37.500 14.85 14.85 0.00 3.02
806 807 4.679654 CCACGGTAACTGAAAATTTTGAGC 59.320 41.667 16.14 1.80 0.00 4.26
807 808 4.378616 CACGGTAACTGAAAATTTTGAGCG 59.621 41.667 16.14 13.48 0.00 5.03
808 809 3.911964 CGGTAACTGAAAATTTTGAGCGG 59.088 43.478 16.14 6.38 0.00 5.52
809 810 4.555906 CGGTAACTGAAAATTTTGAGCGGT 60.556 41.667 16.14 6.97 0.00 5.68
810 811 5.334260 CGGTAACTGAAAATTTTGAGCGGTA 60.334 40.000 16.14 4.98 0.00 4.02
811 812 6.440436 GGTAACTGAAAATTTTGAGCGGTAA 58.560 36.000 16.14 0.00 0.00 2.85
812 813 6.361481 GGTAACTGAAAATTTTGAGCGGTAAC 59.639 38.462 16.14 6.50 0.00 2.50
813 814 5.508200 ACTGAAAATTTTGAGCGGTAACA 57.492 34.783 16.14 0.94 0.00 2.41
814 815 5.897050 ACTGAAAATTTTGAGCGGTAACAA 58.103 33.333 16.14 0.00 0.00 2.83
815 816 6.334202 ACTGAAAATTTTGAGCGGTAACAAA 58.666 32.000 16.14 0.00 34.80 2.83
816 817 6.814146 ACTGAAAATTTTGAGCGGTAACAAAA 59.186 30.769 16.14 14.19 45.49 2.44
817 818 7.332182 ACTGAAAATTTTGAGCGGTAACAAAAA 59.668 29.630 16.14 8.31 44.91 1.94
818 819 7.457060 TGAAAATTTTGAGCGGTAACAAAAAC 58.543 30.769 15.36 9.61 44.91 2.43
819 820 5.977171 AATTTTGAGCGGTAACAAAAACC 57.023 34.783 15.36 0.00 44.91 3.27
820 821 4.722361 TTTTGAGCGGTAACAAAAACCT 57.278 36.364 10.65 0.00 41.08 3.50
821 822 4.722361 TTTGAGCGGTAACAAAAACCTT 57.278 36.364 0.00 0.00 34.66 3.50
822 823 3.701532 TGAGCGGTAACAAAAACCTTG 57.298 42.857 0.00 0.00 34.66 3.61
823 824 3.280295 TGAGCGGTAACAAAAACCTTGA 58.720 40.909 0.00 0.00 34.66 3.02
824 825 3.065648 TGAGCGGTAACAAAAACCTTGAC 59.934 43.478 0.00 0.00 34.66 3.18
825 826 2.359848 AGCGGTAACAAAAACCTTGACC 59.640 45.455 0.00 0.00 34.66 4.02
826 827 2.359848 GCGGTAACAAAAACCTTGACCT 59.640 45.455 0.00 0.00 34.66 3.85
827 828 3.794138 GCGGTAACAAAAACCTTGACCTG 60.794 47.826 0.00 0.00 34.66 4.00
828 829 3.713288 GGTAACAAAAACCTTGACCTGC 58.287 45.455 0.00 0.00 33.97 4.85
829 830 2.577449 AACAAAAACCTTGACCTGCG 57.423 45.000 0.00 0.00 0.00 5.18
830 831 0.102300 ACAAAAACCTTGACCTGCGC 59.898 50.000 0.00 0.00 0.00 6.09
831 832 0.102120 CAAAAACCTTGACCTGCGCA 59.898 50.000 10.98 10.98 0.00 6.09
832 833 0.820871 AAAAACCTTGACCTGCGCAA 59.179 45.000 13.05 0.00 0.00 4.85
833 834 0.102300 AAAACCTTGACCTGCGCAAC 59.898 50.000 13.05 6.76 0.00 4.17
834 835 1.734388 AAACCTTGACCTGCGCAACC 61.734 55.000 13.05 3.78 0.00 3.77
835 836 2.281761 CCTTGACCTGCGCAACCT 60.282 61.111 13.05 0.00 0.00 3.50
836 837 1.003839 CCTTGACCTGCGCAACCTA 60.004 57.895 13.05 0.00 0.00 3.08
837 838 1.021390 CCTTGACCTGCGCAACCTAG 61.021 60.000 13.05 9.42 0.00 3.02
838 839 1.003839 TTGACCTGCGCAACCTAGG 60.004 57.895 13.05 11.75 37.61 3.02
840 841 2.663196 ACCTGCGCAACCTAGGTC 59.337 61.111 16.64 2.75 40.73 3.85
841 842 2.125106 CCTGCGCAACCTAGGTCC 60.125 66.667 16.64 8.67 0.00 4.46
842 843 2.660064 CCTGCGCAACCTAGGTCCT 61.660 63.158 16.64 0.00 0.00 3.85
843 844 1.296715 CTGCGCAACCTAGGTCCTT 59.703 57.895 16.64 0.00 0.00 3.36
844 845 0.741221 CTGCGCAACCTAGGTCCTTC 60.741 60.000 16.64 6.08 0.00 3.46
845 846 1.449778 GCGCAACCTAGGTCCTTCC 60.450 63.158 16.64 1.17 0.00 3.46
846 847 1.980052 CGCAACCTAGGTCCTTCCA 59.020 57.895 16.64 0.00 39.02 3.53
847 848 0.391263 CGCAACCTAGGTCCTTCCAC 60.391 60.000 16.64 0.00 39.02 4.02
848 849 0.035343 GCAACCTAGGTCCTTCCACC 60.035 60.000 16.64 0.00 39.02 4.61
849 850 1.358152 CAACCTAGGTCCTTCCACCA 58.642 55.000 16.64 0.00 39.16 4.17
850 851 1.702957 CAACCTAGGTCCTTCCACCAA 59.297 52.381 16.64 0.00 39.16 3.67
851 852 2.107552 CAACCTAGGTCCTTCCACCAAA 59.892 50.000 16.64 0.00 39.16 3.28
852 853 1.985895 ACCTAGGTCCTTCCACCAAAG 59.014 52.381 9.21 0.00 39.16 2.77
853 854 2.266279 CCTAGGTCCTTCCACCAAAGA 58.734 52.381 0.00 0.00 39.16 2.52
854 855 2.642807 CCTAGGTCCTTCCACCAAAGAA 59.357 50.000 0.00 0.00 39.16 2.52
855 856 2.658807 AGGTCCTTCCACCAAAGAAC 57.341 50.000 0.00 0.00 39.16 3.01
856 857 1.202770 AGGTCCTTCCACCAAAGAACG 60.203 52.381 0.00 0.00 39.16 3.95
857 858 1.202722 GGTCCTTCCACCAAAGAACGA 60.203 52.381 0.00 0.00 36.32 3.85
858 859 2.143925 GTCCTTCCACCAAAGAACGAG 58.856 52.381 0.00 0.00 0.00 4.18
859 860 1.071699 TCCTTCCACCAAAGAACGAGG 59.928 52.381 0.00 0.00 0.00 4.63
860 861 1.071699 CCTTCCACCAAAGAACGAGGA 59.928 52.381 0.00 0.00 0.00 3.71
861 862 2.290323 CCTTCCACCAAAGAACGAGGAT 60.290 50.000 0.00 0.00 0.00 3.24
862 863 2.472695 TCCACCAAAGAACGAGGATG 57.527 50.000 0.00 0.00 0.00 3.51
863 864 1.697432 TCCACCAAAGAACGAGGATGT 59.303 47.619 0.00 0.00 0.00 3.06
864 865 2.105821 TCCACCAAAGAACGAGGATGTT 59.894 45.455 0.00 0.00 34.02 2.71
865 866 3.325425 TCCACCAAAGAACGAGGATGTTA 59.675 43.478 0.00 0.00 30.75 2.41
866 867 4.069304 CCACCAAAGAACGAGGATGTTAA 58.931 43.478 0.00 0.00 30.75 2.01
867 868 4.517453 CCACCAAAGAACGAGGATGTTAAA 59.483 41.667 0.00 0.00 30.75 1.52
868 869 5.334879 CCACCAAAGAACGAGGATGTTAAAG 60.335 44.000 0.00 0.00 30.75 1.85
869 870 4.760204 ACCAAAGAACGAGGATGTTAAAGG 59.240 41.667 0.00 0.00 30.75 3.11
953 1494 3.772572 TCAGAGTTTTACATCCGATCCCA 59.227 43.478 0.00 0.00 0.00 4.37
1010 1553 0.685131 TCGTTCGGGATGGCTTCCTA 60.685 55.000 17.89 5.34 44.75 2.94
1025 1568 1.022735 TCCTACTCGGATGCGAACTC 58.977 55.000 11.42 0.00 36.69 3.01
1026 1569 0.317103 CCTACTCGGATGCGAACTCG 60.317 60.000 11.42 1.00 37.42 4.18
1027 1570 0.317103 CTACTCGGATGCGAACTCGG 60.317 60.000 11.42 0.58 40.23 4.63
1028 1571 2.332362 TACTCGGATGCGAACTCGGC 62.332 60.000 11.42 0.00 40.23 5.54
1029 1572 4.847516 TCGGATGCGAACTCGGCG 62.848 66.667 6.93 0.00 40.23 6.46
1030 1573 4.847516 CGGATGCGAACTCGGCGA 62.848 66.667 10.14 10.14 40.23 5.54
1031 1574 3.255379 GGATGCGAACTCGGCGAC 61.255 66.667 4.99 0.00 40.23 5.19
1032 1575 3.255379 GATGCGAACTCGGCGACC 61.255 66.667 4.99 0.00 40.23 4.79
1033 1576 3.982372 GATGCGAACTCGGCGACCA 62.982 63.158 4.99 0.00 40.23 4.02
1034 1577 3.583276 ATGCGAACTCGGCGACCAA 62.583 57.895 4.99 0.00 40.23 3.67
1035 1578 3.774702 GCGAACTCGGCGACCAAC 61.775 66.667 4.99 0.00 40.23 3.77
1036 1579 3.467119 CGAACTCGGCGACCAACG 61.467 66.667 4.99 6.06 45.66 4.10
1037 1580 2.049802 GAACTCGGCGACCAACGA 60.050 61.111 4.99 0.00 45.77 3.85
1290 1912 0.392193 CTGCGCAGGGAGTCAGATTT 60.392 55.000 29.88 0.00 0.00 2.17
1294 1916 1.673033 CGCAGGGAGTCAGATTTCGTT 60.673 52.381 0.00 0.00 0.00 3.85
1437 2278 0.249911 GTCGTGCAGAAGAGGTGGTT 60.250 55.000 0.00 0.00 0.00 3.67
1547 2388 1.640149 TGGGGAGATTTTGGAGATGCA 59.360 47.619 0.00 0.00 0.00 3.96
1651 2494 3.191539 GCGAGCAAAGGAGAGGCG 61.192 66.667 0.00 0.00 0.00 5.52
1661 2504 2.803030 AGGAGAGGCGAGTGTACTTA 57.197 50.000 0.00 0.00 0.00 2.24
1785 2628 4.711846 AGTATGGAGATTGGCTATATGCGA 59.288 41.667 0.00 0.00 44.05 5.10
1789 2632 3.318017 GAGATTGGCTATATGCGAACGT 58.682 45.455 0.00 0.00 41.94 3.99
1832 2681 4.335647 CCTGCAAGACAGCCGGGT 62.336 66.667 0.00 0.00 45.78 5.28
1917 2766 1.200519 CCCTGAAACCCTGGATACGA 58.799 55.000 0.00 0.00 42.51 3.43
1948 2797 2.808543 CTCTGAAACAGGTTGTGGCTAC 59.191 50.000 0.00 0.00 31.51 3.58
1971 2821 2.229792 TGGAGGTTGACAAAGATGCAC 58.770 47.619 0.00 0.00 0.00 4.57
2157 3007 7.235606 AGGAAGGTGGAAATAATGAGATATCGA 59.764 37.037 0.00 0.00 0.00 3.59
2183 3033 2.438614 CTCGAGGAGGACTGCCGA 60.439 66.667 3.91 4.90 39.96 5.54
2193 3043 1.003580 AGGACTGCCGAACACAATGAT 59.996 47.619 0.00 0.00 39.96 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 2.766263 TGAGATGCCTTGGACGTAGAAT 59.234 45.455 0.00 0.00 0.00 2.40
22 23 2.189594 TGTTGTCTGAGATGCCTTGG 57.810 50.000 0.00 0.00 0.00 3.61
46 47 1.232621 ACTCGACGACGTCCATGTCA 61.233 55.000 21.63 7.88 38.84 3.58
55 56 1.132844 CCTGACAGACTCGACGACG 59.867 63.158 3.32 0.00 41.26 5.12
76 77 2.841988 GGCAGGGGATCGAGCTCT 60.842 66.667 12.85 0.00 0.00 4.09
82 83 3.089874 TGGAAGGGCAGGGGATCG 61.090 66.667 0.00 0.00 0.00 3.69
126 127 3.460868 CGCCTTCCAATTGCCCCC 61.461 66.667 0.00 0.00 0.00 5.40
133 134 1.674322 CACCGGTTCGCCTTCCAAT 60.674 57.895 2.97 0.00 34.30 3.16
134 135 2.281208 CACCGGTTCGCCTTCCAA 60.281 61.111 2.97 0.00 34.30 3.53
148 149 2.700773 GCCATTTCTGTCGGCCACC 61.701 63.158 2.24 0.00 40.07 4.61
163 164 3.483954 GCTAAGGATGCAGAAGCCA 57.516 52.632 0.00 0.00 41.13 4.75
165 166 1.307097 CAGGCTAAGGATGCAGAAGC 58.693 55.000 0.00 0.00 42.57 3.86
179 180 0.913451 ATCTTGGACCTCAGCAGGCT 60.913 55.000 0.00 0.00 45.05 4.58
193 194 5.593909 ACCATGAGACAGTCTCTCTATCTTG 59.406 44.000 27.42 14.31 45.38 3.02
205 206 3.843027 AGGAGATGAAACCATGAGACAGT 59.157 43.478 0.00 0.00 0.00 3.55
209 210 3.453717 CCTGAGGAGATGAAACCATGAGA 59.546 47.826 0.00 0.00 0.00 3.27
210 211 3.433314 CCCTGAGGAGATGAAACCATGAG 60.433 52.174 0.00 0.00 33.47 2.90
229 230 1.995376 CCAAACAGCCAAACTACCCT 58.005 50.000 0.00 0.00 0.00 4.34
234 235 1.035139 CAGAGCCAAACAGCCAAACT 58.965 50.000 0.00 0.00 0.00 2.66
235 236 0.746659 ACAGAGCCAAACAGCCAAAC 59.253 50.000 0.00 0.00 0.00 2.93
236 237 0.746063 CACAGAGCCAAACAGCCAAA 59.254 50.000 0.00 0.00 0.00 3.28
238 239 0.106769 TTCACAGAGCCAAACAGCCA 60.107 50.000 0.00 0.00 0.00 4.75
239 240 1.068055 CATTCACAGAGCCAAACAGCC 60.068 52.381 0.00 0.00 0.00 4.85
240 241 1.610522 ACATTCACAGAGCCAAACAGC 59.389 47.619 0.00 0.00 0.00 4.40
241 242 2.880268 TCACATTCACAGAGCCAAACAG 59.120 45.455 0.00 0.00 0.00 3.16
242 243 2.929641 TCACATTCACAGAGCCAAACA 58.070 42.857 0.00 0.00 0.00 2.83
243 244 3.366679 CCATCACATTCACAGAGCCAAAC 60.367 47.826 0.00 0.00 0.00 2.93
244 245 2.821378 CCATCACATTCACAGAGCCAAA 59.179 45.455 0.00 0.00 0.00 3.28
245 246 2.224843 ACCATCACATTCACAGAGCCAA 60.225 45.455 0.00 0.00 0.00 4.52
247 248 2.119801 ACCATCACATTCACAGAGCC 57.880 50.000 0.00 0.00 0.00 4.70
248 249 4.510038 AAAACCATCACATTCACAGAGC 57.490 40.909 0.00 0.00 0.00 4.09
267 268 3.302344 GCCCAGGCCGCAGAAAAA 61.302 61.111 0.00 0.00 34.56 1.94
268 269 4.284550 AGCCCAGGCCGCAGAAAA 62.285 61.111 4.70 0.00 43.17 2.29
284 285 1.079197 TATCCACAGCCACACGCAG 60.079 57.895 0.00 0.00 41.38 5.18
285 286 1.079197 CTATCCACAGCCACACGCA 60.079 57.895 0.00 0.00 41.38 5.24
286 287 0.673644 AACTATCCACAGCCACACGC 60.674 55.000 0.00 0.00 37.98 5.34
287 288 1.464608 CAAACTATCCACAGCCACACG 59.535 52.381 0.00 0.00 0.00 4.49
288 289 2.226437 CACAAACTATCCACAGCCACAC 59.774 50.000 0.00 0.00 0.00 3.82
289 290 2.503331 CACAAACTATCCACAGCCACA 58.497 47.619 0.00 0.00 0.00 4.17
290 291 1.812571 CCACAAACTATCCACAGCCAC 59.187 52.381 0.00 0.00 0.00 5.01
291 292 1.423541 ACCACAAACTATCCACAGCCA 59.576 47.619 0.00 0.00 0.00 4.75
292 293 1.812571 CACCACAAACTATCCACAGCC 59.187 52.381 0.00 0.00 0.00 4.85
293 294 1.200020 GCACCACAAACTATCCACAGC 59.800 52.381 0.00 0.00 0.00 4.40
294 295 2.226437 GTGCACCACAAACTATCCACAG 59.774 50.000 5.22 0.00 34.08 3.66
295 296 2.226330 GTGCACCACAAACTATCCACA 58.774 47.619 5.22 0.00 34.08 4.17
296 297 1.196808 CGTGCACCACAAACTATCCAC 59.803 52.381 12.15 0.00 33.40 4.02
297 298 1.202710 ACGTGCACCACAAACTATCCA 60.203 47.619 12.15 0.00 33.40 3.41
298 299 1.196808 CACGTGCACCACAAACTATCC 59.803 52.381 12.15 0.00 33.40 2.59
299 300 1.871039 ACACGTGCACCACAAACTATC 59.129 47.619 17.22 0.00 33.40 2.08
300 301 1.601903 CACACGTGCACCACAAACTAT 59.398 47.619 17.22 0.00 33.40 2.12
301 302 1.010580 CACACGTGCACCACAAACTA 58.989 50.000 17.22 0.00 33.40 2.24
302 303 0.958382 ACACACGTGCACCACAAACT 60.958 50.000 17.22 0.00 33.40 2.66
303 304 0.796491 CACACACGTGCACCACAAAC 60.796 55.000 17.22 0.00 36.06 2.93
304 305 1.503994 CACACACGTGCACCACAAA 59.496 52.632 17.22 0.00 36.06 2.83
305 306 3.182312 CACACACGTGCACCACAA 58.818 55.556 17.22 0.00 36.06 3.33
313 314 1.297819 CAGCACAAGCACACACGTG 60.298 57.895 15.48 15.48 46.56 4.49
314 315 1.305219 AACAGCACAAGCACACACGT 61.305 50.000 0.00 0.00 45.49 4.49
315 316 0.179166 AAACAGCACAAGCACACACG 60.179 50.000 0.00 0.00 45.49 4.49
316 317 2.842208 TAAACAGCACAAGCACACAC 57.158 45.000 0.00 0.00 45.49 3.82
317 318 5.703978 AATATAAACAGCACAAGCACACA 57.296 34.783 0.00 0.00 45.49 3.72
318 319 5.345741 CCAAATATAAACAGCACAAGCACAC 59.654 40.000 0.00 0.00 45.49 3.82
319 320 5.010516 ACCAAATATAAACAGCACAAGCACA 59.989 36.000 0.00 0.00 45.49 4.57
320 321 5.469479 ACCAAATATAAACAGCACAAGCAC 58.531 37.500 0.00 0.00 45.49 4.40
321 322 5.720371 ACCAAATATAAACAGCACAAGCA 57.280 34.783 0.00 0.00 45.49 3.91
322 323 5.286082 CGAACCAAATATAAACAGCACAAGC 59.714 40.000 0.00 0.00 42.56 4.01
323 324 6.607689 TCGAACCAAATATAAACAGCACAAG 58.392 36.000 0.00 0.00 0.00 3.16
324 325 6.561737 TCGAACCAAATATAAACAGCACAA 57.438 33.333 0.00 0.00 0.00 3.33
325 326 5.391523 GCTCGAACCAAATATAAACAGCACA 60.392 40.000 0.00 0.00 0.00 4.57
326 327 5.028375 GCTCGAACCAAATATAAACAGCAC 58.972 41.667 0.00 0.00 0.00 4.40
327 328 4.697828 TGCTCGAACCAAATATAAACAGCA 59.302 37.500 0.00 0.00 0.00 4.41
328 329 5.163754 ACTGCTCGAACCAAATATAAACAGC 60.164 40.000 0.00 0.00 0.00 4.40
329 330 6.422776 ACTGCTCGAACCAAATATAAACAG 57.577 37.500 0.00 0.00 0.00 3.16
330 331 6.036735 GCTACTGCTCGAACCAAATATAAACA 59.963 38.462 0.00 0.00 36.03 2.83
331 332 6.419771 GCTACTGCTCGAACCAAATATAAAC 58.580 40.000 0.00 0.00 36.03 2.01
332 333 5.526111 GGCTACTGCTCGAACCAAATATAAA 59.474 40.000 0.00 0.00 39.59 1.40
333 334 5.054477 GGCTACTGCTCGAACCAAATATAA 58.946 41.667 0.00 0.00 39.59 0.98
334 335 4.100344 TGGCTACTGCTCGAACCAAATATA 59.900 41.667 0.00 0.00 39.59 0.86
335 336 3.118408 TGGCTACTGCTCGAACCAAATAT 60.118 43.478 0.00 0.00 39.59 1.28
336 337 2.235155 TGGCTACTGCTCGAACCAAATA 59.765 45.455 0.00 0.00 39.59 1.40
337 338 1.003118 TGGCTACTGCTCGAACCAAAT 59.997 47.619 0.00 0.00 39.59 2.32
338 339 0.394938 TGGCTACTGCTCGAACCAAA 59.605 50.000 0.00 0.00 39.59 3.28
339 340 0.037326 CTGGCTACTGCTCGAACCAA 60.037 55.000 0.00 0.00 39.59 3.67
340 341 1.591703 CTGGCTACTGCTCGAACCA 59.408 57.895 0.00 0.00 39.59 3.67
341 342 1.153549 CCTGGCTACTGCTCGAACC 60.154 63.158 0.00 0.00 39.59 3.62
342 343 0.037232 AACCTGGCTACTGCTCGAAC 60.037 55.000 0.00 0.00 39.59 3.95
343 344 0.037326 CAACCTGGCTACTGCTCGAA 60.037 55.000 0.00 0.00 39.59 3.71
344 345 1.591703 CAACCTGGCTACTGCTCGA 59.408 57.895 0.00 0.00 39.59 4.04
345 346 2.103042 GCAACCTGGCTACTGCTCG 61.103 63.158 0.00 0.00 39.59 5.03
346 347 1.746991 GGCAACCTGGCTACTGCTC 60.747 63.158 9.58 0.00 40.14 4.26
347 348 2.352805 GGCAACCTGGCTACTGCT 59.647 61.111 9.58 0.00 40.14 4.24
354 355 1.115326 AGGAAACAAGGCAACCTGGC 61.115 55.000 0.00 0.00 44.10 4.85
355 356 1.413118 AAGGAAACAAGGCAACCTGG 58.587 50.000 0.00 0.00 32.13 4.45
356 357 3.541996 AAAAGGAAACAAGGCAACCTG 57.458 42.857 0.00 0.00 32.13 4.00
357 358 3.774766 AGAAAAAGGAAACAAGGCAACCT 59.225 39.130 0.00 0.00 33.87 3.50
358 359 4.137116 AGAAAAAGGAAACAAGGCAACC 57.863 40.909 0.00 0.00 37.17 3.77
359 360 7.039270 TCTTTAGAAAAAGGAAACAAGGCAAC 58.961 34.615 0.00 0.00 42.09 4.17
360 361 7.176589 TCTTTAGAAAAAGGAAACAAGGCAA 57.823 32.000 0.00 0.00 42.09 4.52
361 362 6.783708 TCTTTAGAAAAAGGAAACAAGGCA 57.216 33.333 0.00 0.00 42.09 4.75
362 363 9.758651 TTTATCTTTAGAAAAAGGAAACAAGGC 57.241 29.630 0.00 0.00 42.09 4.35
380 381 9.660180 GTGTAGAAGAGACAAGGATTTATCTTT 57.340 33.333 0.00 0.00 0.00 2.52
381 382 8.816894 TGTGTAGAAGAGACAAGGATTTATCTT 58.183 33.333 0.00 0.00 0.00 2.40
382 383 8.367660 TGTGTAGAAGAGACAAGGATTTATCT 57.632 34.615 0.00 0.00 0.00 1.98
383 384 9.039870 CATGTGTAGAAGAGACAAGGATTTATC 57.960 37.037 0.00 0.00 34.49 1.75
384 385 8.762645 TCATGTGTAGAAGAGACAAGGATTTAT 58.237 33.333 0.00 0.00 34.49 1.40
385 386 8.134202 TCATGTGTAGAAGAGACAAGGATTTA 57.866 34.615 0.00 0.00 34.49 1.40
386 387 7.009179 TCATGTGTAGAAGAGACAAGGATTT 57.991 36.000 0.00 0.00 34.49 2.17
387 388 6.611613 TCATGTGTAGAAGAGACAAGGATT 57.388 37.500 0.00 0.00 34.49 3.01
388 389 6.805016 ATCATGTGTAGAAGAGACAAGGAT 57.195 37.500 0.00 0.00 34.49 3.24
389 390 6.096987 GGTATCATGTGTAGAAGAGACAAGGA 59.903 42.308 0.00 0.00 34.49 3.36
390 391 6.127338 TGGTATCATGTGTAGAAGAGACAAGG 60.127 42.308 0.00 0.00 34.49 3.61
391 392 6.867550 TGGTATCATGTGTAGAAGAGACAAG 58.132 40.000 0.00 0.00 34.49 3.16
392 393 6.628175 GCTGGTATCATGTGTAGAAGAGACAA 60.628 42.308 0.00 0.00 34.49 3.18
393 394 5.163509 GCTGGTATCATGTGTAGAAGAGACA 60.164 44.000 0.00 0.00 35.46 3.41
394 395 5.068460 AGCTGGTATCATGTGTAGAAGAGAC 59.932 44.000 0.00 0.00 0.00 3.36
395 396 5.068329 CAGCTGGTATCATGTGTAGAAGAGA 59.932 44.000 5.57 0.00 0.00 3.10
396 397 5.068329 TCAGCTGGTATCATGTGTAGAAGAG 59.932 44.000 15.13 0.00 0.00 2.85
397 398 4.956075 TCAGCTGGTATCATGTGTAGAAGA 59.044 41.667 15.13 0.00 0.00 2.87
398 399 5.268118 TCAGCTGGTATCATGTGTAGAAG 57.732 43.478 15.13 0.00 0.00 2.85
399 400 5.363580 TGATCAGCTGGTATCATGTGTAGAA 59.636 40.000 15.13 0.00 0.00 2.10
400 401 4.895297 TGATCAGCTGGTATCATGTGTAGA 59.105 41.667 15.13 0.00 0.00 2.59
401 402 4.987285 GTGATCAGCTGGTATCATGTGTAG 59.013 45.833 18.12 0.00 34.77 2.74
402 403 4.405358 TGTGATCAGCTGGTATCATGTGTA 59.595 41.667 18.12 4.23 34.77 2.90
403 404 3.198417 TGTGATCAGCTGGTATCATGTGT 59.802 43.478 18.12 0.00 34.77 3.72
404 405 3.800531 TGTGATCAGCTGGTATCATGTG 58.199 45.455 18.12 0.00 34.77 3.21
405 406 4.701651 ATGTGATCAGCTGGTATCATGT 57.298 40.909 18.12 9.45 34.77 3.21
406 407 5.758924 CAAATGTGATCAGCTGGTATCATG 58.241 41.667 18.12 10.47 34.77 3.07
407 408 4.277672 GCAAATGTGATCAGCTGGTATCAT 59.722 41.667 18.12 13.86 34.77 2.45
408 409 3.628942 GCAAATGTGATCAGCTGGTATCA 59.371 43.478 15.13 13.74 0.00 2.15
409 410 3.628942 TGCAAATGTGATCAGCTGGTATC 59.371 43.478 15.13 11.09 0.00 2.24
410 411 3.623703 TGCAAATGTGATCAGCTGGTAT 58.376 40.909 15.13 0.00 0.00 2.73
411 412 3.070476 TGCAAATGTGATCAGCTGGTA 57.930 42.857 15.13 0.00 0.00 3.25
412 413 1.913778 TGCAAATGTGATCAGCTGGT 58.086 45.000 15.13 6.50 0.00 4.00
413 414 3.520290 AATGCAAATGTGATCAGCTGG 57.480 42.857 15.13 0.00 0.00 4.85
414 415 6.504398 AGAATAATGCAAATGTGATCAGCTG 58.496 36.000 7.63 7.63 0.00 4.24
415 416 6.546403 AGAGAATAATGCAAATGTGATCAGCT 59.454 34.615 0.00 0.00 0.00 4.24
416 417 6.637254 CAGAGAATAATGCAAATGTGATCAGC 59.363 38.462 0.00 0.00 0.00 4.26
417 418 7.704271 ACAGAGAATAATGCAAATGTGATCAG 58.296 34.615 0.00 0.00 0.00 2.90
418 419 7.634671 ACAGAGAATAATGCAAATGTGATCA 57.365 32.000 0.00 0.00 0.00 2.92
419 420 8.186163 TGAACAGAGAATAATGCAAATGTGATC 58.814 33.333 0.00 0.00 0.00 2.92
420 421 8.058667 TGAACAGAGAATAATGCAAATGTGAT 57.941 30.769 0.00 0.00 0.00 3.06
421 422 7.362315 CCTGAACAGAGAATAATGCAAATGTGA 60.362 37.037 3.19 0.00 0.00 3.58
422 423 6.750501 CCTGAACAGAGAATAATGCAAATGTG 59.249 38.462 3.19 0.00 0.00 3.21
423 424 6.660521 TCCTGAACAGAGAATAATGCAAATGT 59.339 34.615 3.19 0.00 0.00 2.71
424 425 7.092137 TCCTGAACAGAGAATAATGCAAATG 57.908 36.000 3.19 0.00 0.00 2.32
425 426 7.707624 TTCCTGAACAGAGAATAATGCAAAT 57.292 32.000 3.19 0.00 0.00 2.32
426 427 7.707624 ATTCCTGAACAGAGAATAATGCAAA 57.292 32.000 12.95 0.00 31.32 3.68
427 428 7.707624 AATTCCTGAACAGAGAATAATGCAA 57.292 32.000 14.11 0.00 32.17 4.08
428 429 7.177216 ACAAATTCCTGAACAGAGAATAATGCA 59.823 33.333 14.11 0.00 32.17 3.96
429 430 7.542025 ACAAATTCCTGAACAGAGAATAATGC 58.458 34.615 14.11 0.00 32.17 3.56
430 431 9.565213 GAACAAATTCCTGAACAGAGAATAATG 57.435 33.333 14.11 15.92 32.17 1.90
431 432 8.454106 CGAACAAATTCCTGAACAGAGAATAAT 58.546 33.333 14.11 7.81 32.17 1.28
432 433 7.444183 ACGAACAAATTCCTGAACAGAGAATAA 59.556 33.333 14.11 0.46 32.17 1.40
433 434 6.934645 ACGAACAAATTCCTGAACAGAGAATA 59.065 34.615 14.11 0.00 32.17 1.75
434 435 5.765182 ACGAACAAATTCCTGAACAGAGAAT 59.235 36.000 3.19 7.75 33.09 2.40
435 436 5.123227 ACGAACAAATTCCTGAACAGAGAA 58.877 37.500 3.19 5.93 0.00 2.87
436 437 4.703897 ACGAACAAATTCCTGAACAGAGA 58.296 39.130 3.19 0.00 0.00 3.10
437 438 6.727824 ATACGAACAAATTCCTGAACAGAG 57.272 37.500 3.19 0.00 0.00 3.35
438 439 6.708502 TCAATACGAACAAATTCCTGAACAGA 59.291 34.615 3.19 0.00 0.00 3.41
439 440 6.898041 TCAATACGAACAAATTCCTGAACAG 58.102 36.000 0.00 0.00 0.00 3.16
440 441 6.072728 CCTCAATACGAACAAATTCCTGAACA 60.073 38.462 0.00 0.00 0.00 3.18
441 442 6.148811 TCCTCAATACGAACAAATTCCTGAAC 59.851 38.462 0.00 0.00 0.00 3.18
442 443 6.234920 TCCTCAATACGAACAAATTCCTGAA 58.765 36.000 0.00 0.00 0.00 3.02
443 444 5.800296 TCCTCAATACGAACAAATTCCTGA 58.200 37.500 0.00 0.00 0.00 3.86
444 445 6.494893 TTCCTCAATACGAACAAATTCCTG 57.505 37.500 0.00 0.00 0.00 3.86
445 446 7.519032 TTTTCCTCAATACGAACAAATTCCT 57.481 32.000 0.00 0.00 0.00 3.36
446 447 8.757164 AATTTTCCTCAATACGAACAAATTCC 57.243 30.769 0.00 0.00 0.00 3.01
450 451 9.834628 GTGATAATTTTCCTCAATACGAACAAA 57.165 29.630 0.00 0.00 0.00 2.83
451 452 9.004717 TGTGATAATTTTCCTCAATACGAACAA 57.995 29.630 0.00 0.00 0.00 2.83
452 453 8.554835 TGTGATAATTTTCCTCAATACGAACA 57.445 30.769 0.00 0.00 0.00 3.18
503 504 8.832521 CGTGACCCTAAACATAATAATTGCTAA 58.167 33.333 0.00 0.00 0.00 3.09
504 505 7.041644 GCGTGACCCTAAACATAATAATTGCTA 60.042 37.037 0.00 0.00 0.00 3.49
505 506 6.238648 GCGTGACCCTAAACATAATAATTGCT 60.239 38.462 0.00 0.00 0.00 3.91
506 507 5.912955 GCGTGACCCTAAACATAATAATTGC 59.087 40.000 0.00 0.00 0.00 3.56
507 508 6.133392 CGCGTGACCCTAAACATAATAATTG 58.867 40.000 0.00 0.00 0.00 2.32
508 509 5.277634 GCGCGTGACCCTAAACATAATAATT 60.278 40.000 8.43 0.00 0.00 1.40
509 510 4.212636 GCGCGTGACCCTAAACATAATAAT 59.787 41.667 8.43 0.00 0.00 1.28
510 511 3.556775 GCGCGTGACCCTAAACATAATAA 59.443 43.478 8.43 0.00 0.00 1.40
511 512 3.125316 GCGCGTGACCCTAAACATAATA 58.875 45.455 8.43 0.00 0.00 0.98
512 513 1.937899 GCGCGTGACCCTAAACATAAT 59.062 47.619 8.43 0.00 0.00 1.28
513 514 1.361793 GCGCGTGACCCTAAACATAA 58.638 50.000 8.43 0.00 0.00 1.90
514 515 0.460635 GGCGCGTGACCCTAAACATA 60.461 55.000 8.43 0.00 0.00 2.29
515 516 1.743995 GGCGCGTGACCCTAAACAT 60.744 57.895 8.43 0.00 0.00 2.71
516 517 2.357760 GGCGCGTGACCCTAAACA 60.358 61.111 8.43 0.00 0.00 2.83
517 518 1.632948 GAAGGCGCGTGACCCTAAAC 61.633 60.000 8.43 0.00 0.00 2.01
518 519 1.375013 GAAGGCGCGTGACCCTAAA 60.375 57.895 8.43 0.00 0.00 1.85
519 520 1.823169 AAGAAGGCGCGTGACCCTAA 61.823 55.000 8.43 0.00 0.00 2.69
520 521 1.823169 AAAGAAGGCGCGTGACCCTA 61.823 55.000 8.43 0.00 0.00 3.53
521 522 2.676163 AAAAGAAGGCGCGTGACCCT 62.676 55.000 8.43 1.76 0.00 4.34
522 523 0.952010 TAAAAGAAGGCGCGTGACCC 60.952 55.000 8.43 0.00 0.00 4.46
523 524 0.869730 TTAAAAGAAGGCGCGTGACC 59.130 50.000 8.43 0.00 0.00 4.02
524 525 2.673976 TTTAAAAGAAGGCGCGTGAC 57.326 45.000 8.43 0.00 0.00 3.67
525 526 3.251245 TCATTTTAAAAGAAGGCGCGTGA 59.749 39.130 8.43 0.00 0.00 4.35
526 527 3.560503 TCATTTTAAAAGAAGGCGCGTG 58.439 40.909 8.43 0.00 0.00 5.34
527 528 3.907894 TCATTTTAAAAGAAGGCGCGT 57.092 38.095 8.43 0.00 0.00 6.01
528 529 5.568747 TTTTCATTTTAAAAGAAGGCGCG 57.431 34.783 0.00 0.00 0.00 6.86
529 530 9.528847 CTTTATTTTCATTTTAAAAGAAGGCGC 57.471 29.630 6.79 0.00 32.82 6.53
539 540 9.495572 ACCGCCAATTCTTTATTTTCATTTTAA 57.504 25.926 0.00 0.00 0.00 1.52
541 542 7.977789 ACCGCCAATTCTTTATTTTCATTTT 57.022 28.000 0.00 0.00 0.00 1.82
542 543 8.931775 GTTACCGCCAATTCTTTATTTTCATTT 58.068 29.630 0.00 0.00 0.00 2.32
543 544 8.091449 TGTTACCGCCAATTCTTTATTTTCATT 58.909 29.630 0.00 0.00 0.00 2.57
544 545 7.544217 GTGTTACCGCCAATTCTTTATTTTCAT 59.456 33.333 0.00 0.00 0.00 2.57
545 546 6.864165 GTGTTACCGCCAATTCTTTATTTTCA 59.136 34.615 0.00 0.00 0.00 2.69
546 547 7.088272 AGTGTTACCGCCAATTCTTTATTTTC 58.912 34.615 0.00 0.00 0.00 2.29
547 548 6.988522 AGTGTTACCGCCAATTCTTTATTTT 58.011 32.000 0.00 0.00 0.00 1.82
548 549 6.584185 AGTGTTACCGCCAATTCTTTATTT 57.416 33.333 0.00 0.00 0.00 1.40
549 550 6.655848 TGTAGTGTTACCGCCAATTCTTTATT 59.344 34.615 0.00 0.00 0.00 1.40
550 551 6.093082 GTGTAGTGTTACCGCCAATTCTTTAT 59.907 38.462 0.00 0.00 0.00 1.40
551 552 5.409214 GTGTAGTGTTACCGCCAATTCTTTA 59.591 40.000 0.00 0.00 0.00 1.85
552 553 4.214758 GTGTAGTGTTACCGCCAATTCTTT 59.785 41.667 0.00 0.00 0.00 2.52
553 554 3.749609 GTGTAGTGTTACCGCCAATTCTT 59.250 43.478 0.00 0.00 0.00 2.52
554 555 3.244284 TGTGTAGTGTTACCGCCAATTCT 60.244 43.478 0.00 0.00 0.00 2.40
555 556 3.068560 TGTGTAGTGTTACCGCCAATTC 58.931 45.455 0.00 0.00 0.00 2.17
556 557 3.128852 TGTGTAGTGTTACCGCCAATT 57.871 42.857 0.00 0.00 0.00 2.32
557 558 2.843401 TGTGTAGTGTTACCGCCAAT 57.157 45.000 0.00 0.00 0.00 3.16
558 559 2.616634 TTGTGTAGTGTTACCGCCAA 57.383 45.000 0.00 0.00 0.00 4.52
559 560 2.616634 TTTGTGTAGTGTTACCGCCA 57.383 45.000 0.00 0.00 0.00 5.69
560 561 3.068560 TCATTTGTGTAGTGTTACCGCC 58.931 45.455 0.00 0.00 0.00 6.13
561 562 4.735662 TTCATTTGTGTAGTGTTACCGC 57.264 40.909 0.00 0.00 0.00 5.68
587 588 4.929819 AGTGTTACCGCCAATTCTTTTT 57.070 36.364 0.00 0.00 0.00 1.94
588 589 4.822896 TGTAGTGTTACCGCCAATTCTTTT 59.177 37.500 0.00 0.00 0.00 2.27
589 590 4.214758 GTGTAGTGTTACCGCCAATTCTTT 59.785 41.667 0.00 0.00 0.00 2.52
590 591 3.749609 GTGTAGTGTTACCGCCAATTCTT 59.250 43.478 0.00 0.00 0.00 2.52
591 592 3.244284 TGTGTAGTGTTACCGCCAATTCT 60.244 43.478 0.00 0.00 0.00 2.40
592 593 3.068560 TGTGTAGTGTTACCGCCAATTC 58.931 45.455 0.00 0.00 0.00 2.17
593 594 3.128852 TGTGTAGTGTTACCGCCAATT 57.871 42.857 0.00 0.00 0.00 2.32
594 595 2.843401 TGTGTAGTGTTACCGCCAAT 57.157 45.000 0.00 0.00 0.00 3.16
595 596 2.616634 TTGTGTAGTGTTACCGCCAA 57.383 45.000 0.00 0.00 0.00 4.52
596 597 2.616634 TTTGTGTAGTGTTACCGCCA 57.383 45.000 0.00 0.00 0.00 5.69
597 598 3.068560 TCATTTGTGTAGTGTTACCGCC 58.931 45.455 0.00 0.00 0.00 6.13
598 599 4.735662 TTCATTTGTGTAGTGTTACCGC 57.264 40.909 0.00 0.00 0.00 5.68
623 624 7.085746 GTGTAGTGTTACCGCCAATTATTTTT 58.914 34.615 0.00 0.00 0.00 1.94
624 625 6.349528 GGTGTAGTGTTACCGCCAATTATTTT 60.350 38.462 0.00 0.00 0.00 1.82
625 626 5.124297 GGTGTAGTGTTACCGCCAATTATTT 59.876 40.000 0.00 0.00 0.00 1.40
626 627 4.637091 GGTGTAGTGTTACCGCCAATTATT 59.363 41.667 0.00 0.00 0.00 1.40
627 628 4.193865 GGTGTAGTGTTACCGCCAATTAT 58.806 43.478 0.00 0.00 0.00 1.28
628 629 3.007723 TGGTGTAGTGTTACCGCCAATTA 59.992 43.478 0.00 0.00 39.87 1.40
629 630 2.224572 TGGTGTAGTGTTACCGCCAATT 60.225 45.455 0.00 0.00 39.87 2.32
630 631 1.348366 TGGTGTAGTGTTACCGCCAAT 59.652 47.619 0.00 0.00 39.87 3.16
631 632 0.757512 TGGTGTAGTGTTACCGCCAA 59.242 50.000 0.00 0.00 39.87 4.52
632 633 0.319083 CTGGTGTAGTGTTACCGCCA 59.681 55.000 0.00 0.00 39.87 5.69
633 634 0.319405 ACTGGTGTAGTGTTACCGCC 59.681 55.000 0.00 0.00 39.87 6.13
634 635 2.599659 GTACTGGTGTAGTGTTACCGC 58.400 52.381 0.00 0.00 40.65 5.68
635 636 2.557924 TGGTACTGGTGTAGTGTTACCG 59.442 50.000 0.00 0.00 38.05 4.02
636 637 3.615834 GCTGGTACTGGTGTAGTGTTACC 60.616 52.174 0.00 0.00 40.65 2.85
637 638 3.582780 GCTGGTACTGGTGTAGTGTTAC 58.417 50.000 0.00 0.00 40.65 2.50
638 639 2.564062 GGCTGGTACTGGTGTAGTGTTA 59.436 50.000 0.00 0.00 40.65 2.41
639 640 1.346722 GGCTGGTACTGGTGTAGTGTT 59.653 52.381 0.00 0.00 40.65 3.32
640 641 0.974383 GGCTGGTACTGGTGTAGTGT 59.026 55.000 0.00 0.00 40.65 3.55
641 642 0.973632 TGGCTGGTACTGGTGTAGTG 59.026 55.000 0.00 0.00 40.65 2.74
642 643 1.555075 CATGGCTGGTACTGGTGTAGT 59.445 52.381 0.00 0.00 43.56 2.73
643 644 1.555075 ACATGGCTGGTACTGGTGTAG 59.445 52.381 0.00 0.00 0.00 2.74
644 645 1.651737 ACATGGCTGGTACTGGTGTA 58.348 50.000 0.00 0.00 0.00 2.90
645 646 0.771127 AACATGGCTGGTACTGGTGT 59.229 50.000 0.00 0.00 0.00 4.16
646 647 1.167851 CAACATGGCTGGTACTGGTG 58.832 55.000 0.00 0.00 0.00 4.17
647 648 0.771127 ACAACATGGCTGGTACTGGT 59.229 50.000 0.00 0.00 0.00 4.00
648 649 1.909700 AACAACATGGCTGGTACTGG 58.090 50.000 0.00 0.00 0.00 4.00
649 650 2.884012 TCAAACAACATGGCTGGTACTG 59.116 45.455 0.00 0.00 0.00 2.74
650 651 3.222173 TCAAACAACATGGCTGGTACT 57.778 42.857 0.00 0.00 0.00 2.73
651 652 4.519540 AATCAAACAACATGGCTGGTAC 57.480 40.909 0.00 0.00 0.00 3.34
652 653 5.565509 TCTAATCAAACAACATGGCTGGTA 58.434 37.500 0.00 0.00 0.00 3.25
653 654 4.406456 TCTAATCAAACAACATGGCTGGT 58.594 39.130 0.00 0.00 0.00 4.00
654 655 4.701651 TCTCTAATCAAACAACATGGCTGG 59.298 41.667 0.00 0.00 0.00 4.85
655 656 5.885230 TCTCTAATCAAACAACATGGCTG 57.115 39.130 0.00 0.00 0.00 4.85
656 657 7.341805 AGTATCTCTAATCAAACAACATGGCT 58.658 34.615 0.00 0.00 0.00 4.75
657 658 7.559590 AGTATCTCTAATCAAACAACATGGC 57.440 36.000 0.00 0.00 0.00 4.40
678 679 9.683069 GCCTAACGCATAGTTAATAACTTAGTA 57.317 33.333 11.22 0.00 43.96 1.82
679 680 8.199449 TGCCTAACGCATAGTTAATAACTTAGT 58.801 33.333 11.22 4.25 44.64 2.24
680 681 8.583810 TGCCTAACGCATAGTTAATAACTTAG 57.416 34.615 11.22 5.79 44.64 2.18
696 697 5.837586 TTTTTGAATTGAATGCCTAACGC 57.162 34.783 0.00 0.00 38.31 4.84
754 755 6.593382 CCAAATTTATTGATGCCCGAGAAAAA 59.407 34.615 0.00 0.00 0.00 1.94
755 756 6.105333 CCAAATTTATTGATGCCCGAGAAAA 58.895 36.000 0.00 0.00 0.00 2.29
756 757 5.186797 ACCAAATTTATTGATGCCCGAGAAA 59.813 36.000 0.00 0.00 0.00 2.52
757 758 4.709397 ACCAAATTTATTGATGCCCGAGAA 59.291 37.500 0.00 0.00 0.00 2.87
758 759 4.277476 ACCAAATTTATTGATGCCCGAGA 58.723 39.130 0.00 0.00 0.00 4.04
759 760 4.654091 ACCAAATTTATTGATGCCCGAG 57.346 40.909 0.00 0.00 0.00 4.63
760 761 5.163499 GGTTACCAAATTTATTGATGCCCGA 60.163 40.000 0.00 0.00 0.00 5.14
761 762 5.047188 GGTTACCAAATTTATTGATGCCCG 58.953 41.667 0.00 0.00 0.00 6.13
762 763 5.815222 GTGGTTACCAAATTTATTGATGCCC 59.185 40.000 5.33 0.00 34.18 5.36
763 764 5.518487 CGTGGTTACCAAATTTATTGATGCC 59.482 40.000 5.33 0.00 34.18 4.40
764 765 5.518487 CCGTGGTTACCAAATTTATTGATGC 59.482 40.000 5.33 0.00 34.18 3.91
765 766 6.626302 ACCGTGGTTACCAAATTTATTGATG 58.374 36.000 5.33 0.00 34.18 3.07
766 767 6.844097 ACCGTGGTTACCAAATTTATTGAT 57.156 33.333 5.33 0.00 34.18 2.57
767 768 7.447853 AGTTACCGTGGTTACCAAATTTATTGA 59.552 33.333 5.33 0.00 34.18 2.57
768 769 7.539366 CAGTTACCGTGGTTACCAAATTTATTG 59.461 37.037 5.33 0.00 34.18 1.90
769 770 7.447853 TCAGTTACCGTGGTTACCAAATTTATT 59.552 33.333 5.33 0.00 34.18 1.40
770 771 6.941436 TCAGTTACCGTGGTTACCAAATTTAT 59.059 34.615 5.33 0.00 34.18 1.40
771 772 6.294473 TCAGTTACCGTGGTTACCAAATTTA 58.706 36.000 5.33 0.00 34.18 1.40
772 773 5.131784 TCAGTTACCGTGGTTACCAAATTT 58.868 37.500 5.33 0.00 34.18 1.82
773 774 4.716794 TCAGTTACCGTGGTTACCAAATT 58.283 39.130 5.33 0.00 34.18 1.82
774 775 4.354893 TCAGTTACCGTGGTTACCAAAT 57.645 40.909 5.33 0.00 34.18 2.32
775 776 3.834489 TCAGTTACCGTGGTTACCAAA 57.166 42.857 5.33 0.00 34.18 3.28
776 777 3.834489 TTCAGTTACCGTGGTTACCAA 57.166 42.857 5.33 0.00 34.18 3.67
777 778 3.834489 TTTCAGTTACCGTGGTTACCA 57.166 42.857 0.00 0.00 0.00 3.25
778 779 5.694231 AATTTTCAGTTACCGTGGTTACC 57.306 39.130 4.66 0.00 0.00 2.85
779 780 7.194962 TCAAAATTTTCAGTTACCGTGGTTAC 58.805 34.615 0.00 0.00 0.00 2.50
780 781 7.330900 TCAAAATTTTCAGTTACCGTGGTTA 57.669 32.000 0.00 0.00 0.00 2.85
781 782 6.210287 TCAAAATTTTCAGTTACCGTGGTT 57.790 33.333 0.00 0.00 0.00 3.67
782 783 5.735070 GCTCAAAATTTTCAGTTACCGTGGT 60.735 40.000 3.65 0.00 0.00 4.16
783 784 4.679654 GCTCAAAATTTTCAGTTACCGTGG 59.320 41.667 3.65 0.00 0.00 4.94
784 785 4.378616 CGCTCAAAATTTTCAGTTACCGTG 59.621 41.667 3.65 0.00 0.00 4.94
785 786 4.533222 CGCTCAAAATTTTCAGTTACCGT 58.467 39.130 3.65 0.00 0.00 4.83
786 787 3.911964 CCGCTCAAAATTTTCAGTTACCG 59.088 43.478 3.65 0.00 0.00 4.02
787 788 4.866921 ACCGCTCAAAATTTTCAGTTACC 58.133 39.130 3.65 0.00 0.00 2.85
788 789 6.913673 TGTTACCGCTCAAAATTTTCAGTTAC 59.086 34.615 3.65 1.97 0.00 2.50
789 790 7.028926 TGTTACCGCTCAAAATTTTCAGTTA 57.971 32.000 3.65 0.00 0.00 2.24
790 791 5.897050 TGTTACCGCTCAAAATTTTCAGTT 58.103 33.333 3.65 0.00 0.00 3.16
791 792 5.508200 TGTTACCGCTCAAAATTTTCAGT 57.492 34.783 3.65 0.00 0.00 3.41
792 793 6.820470 TTTGTTACCGCTCAAAATTTTCAG 57.180 33.333 0.00 0.00 31.86 3.02
793 794 7.413109 GGTTTTTGTTACCGCTCAAAATTTTCA 60.413 33.333 0.00 0.00 41.17 2.69
794 795 6.902948 GGTTTTTGTTACCGCTCAAAATTTTC 59.097 34.615 0.00 0.00 41.17 2.29
795 796 6.596106 AGGTTTTTGTTACCGCTCAAAATTTT 59.404 30.769 0.00 0.00 41.17 1.82
796 797 6.110033 AGGTTTTTGTTACCGCTCAAAATTT 58.890 32.000 0.00 0.00 41.17 1.82
797 798 5.666462 AGGTTTTTGTTACCGCTCAAAATT 58.334 33.333 0.00 0.00 41.17 1.82
798 799 5.270893 AGGTTTTTGTTACCGCTCAAAAT 57.729 34.783 0.00 0.00 41.17 1.82
799 800 4.722361 AGGTTTTTGTTACCGCTCAAAA 57.278 36.364 0.00 0.00 40.69 2.44
800 801 4.158025 TCAAGGTTTTTGTTACCGCTCAAA 59.842 37.500 0.00 0.00 40.69 2.69
801 802 3.695060 TCAAGGTTTTTGTTACCGCTCAA 59.305 39.130 0.00 0.00 40.69 3.02
802 803 3.065648 GTCAAGGTTTTTGTTACCGCTCA 59.934 43.478 0.00 0.00 40.69 4.26
803 804 3.549423 GGTCAAGGTTTTTGTTACCGCTC 60.549 47.826 0.00 0.00 40.69 5.03
804 805 2.359848 GGTCAAGGTTTTTGTTACCGCT 59.640 45.455 0.00 0.00 40.69 5.52
805 806 2.359848 AGGTCAAGGTTTTTGTTACCGC 59.640 45.455 0.00 0.00 40.69 5.68
806 807 3.794138 GCAGGTCAAGGTTTTTGTTACCG 60.794 47.826 0.00 0.00 40.69 4.02
807 808 3.713288 GCAGGTCAAGGTTTTTGTTACC 58.287 45.455 0.00 0.00 35.85 2.85
808 809 3.368495 CGCAGGTCAAGGTTTTTGTTAC 58.632 45.455 0.00 0.00 0.00 2.50
809 810 2.223618 GCGCAGGTCAAGGTTTTTGTTA 60.224 45.455 0.30 0.00 0.00 2.41
810 811 1.470805 GCGCAGGTCAAGGTTTTTGTT 60.471 47.619 0.30 0.00 0.00 2.83
811 812 0.102300 GCGCAGGTCAAGGTTTTTGT 59.898 50.000 0.30 0.00 0.00 2.83
812 813 0.102120 TGCGCAGGTCAAGGTTTTTG 59.898 50.000 5.66 0.00 0.00 2.44
813 814 0.820871 TTGCGCAGGTCAAGGTTTTT 59.179 45.000 11.31 0.00 0.00 1.94
814 815 0.102300 GTTGCGCAGGTCAAGGTTTT 59.898 50.000 11.31 0.00 0.00 2.43
815 816 1.733526 GTTGCGCAGGTCAAGGTTT 59.266 52.632 11.31 0.00 0.00 3.27
816 817 2.193536 GGTTGCGCAGGTCAAGGTT 61.194 57.895 11.31 0.00 0.00 3.50
817 818 1.764571 TAGGTTGCGCAGGTCAAGGT 61.765 55.000 11.31 0.00 0.00 3.50
818 819 1.003839 TAGGTTGCGCAGGTCAAGG 60.004 57.895 11.31 0.00 0.00 3.61
819 820 1.021390 CCTAGGTTGCGCAGGTCAAG 61.021 60.000 11.31 6.04 0.00 3.02
820 821 1.003839 CCTAGGTTGCGCAGGTCAA 60.004 57.895 11.31 0.00 0.00 3.18
821 822 2.214216 ACCTAGGTTGCGCAGGTCA 61.214 57.895 9.21 0.00 38.29 4.02
822 823 2.663196 ACCTAGGTTGCGCAGGTC 59.337 61.111 9.21 5.44 38.29 3.85
823 824 2.663196 GACCTAGGTTGCGCAGGT 59.337 61.111 17.53 17.25 45.42 4.00
824 825 2.125106 GGACCTAGGTTGCGCAGG 60.125 66.667 17.53 11.02 35.45 4.85
825 826 0.741221 GAAGGACCTAGGTTGCGCAG 60.741 60.000 17.53 0.00 0.00 5.18
826 827 1.295423 GAAGGACCTAGGTTGCGCA 59.705 57.895 17.53 5.66 0.00 6.09
827 828 1.449778 GGAAGGACCTAGGTTGCGC 60.450 63.158 17.53 0.00 35.41 6.09
828 829 0.391263 GTGGAAGGACCTAGGTTGCG 60.391 60.000 17.53 0.00 39.86 4.85
829 830 0.035343 GGTGGAAGGACCTAGGTTGC 60.035 60.000 17.53 6.23 39.86 4.17
830 831 1.358152 TGGTGGAAGGACCTAGGTTG 58.642 55.000 17.53 0.00 39.86 3.77
831 832 2.127651 TTGGTGGAAGGACCTAGGTT 57.872 50.000 17.53 0.00 39.86 3.50
832 833 1.985895 CTTTGGTGGAAGGACCTAGGT 59.014 52.381 16.26 16.26 39.86 3.08
833 834 2.266279 TCTTTGGTGGAAGGACCTAGG 58.734 52.381 7.41 7.41 39.86 3.02
834 835 3.676093 GTTCTTTGGTGGAAGGACCTAG 58.324 50.000 0.00 0.00 39.86 3.02
835 836 2.038033 CGTTCTTTGGTGGAAGGACCTA 59.962 50.000 0.00 0.00 39.86 3.08
836 837 1.202770 CGTTCTTTGGTGGAAGGACCT 60.203 52.381 0.00 0.00 39.86 3.85
837 838 1.202722 TCGTTCTTTGGTGGAAGGACC 60.203 52.381 0.00 0.00 32.50 4.46
838 839 2.143925 CTCGTTCTTTGGTGGAAGGAC 58.856 52.381 0.00 0.00 35.00 3.85
839 840 1.071699 CCTCGTTCTTTGGTGGAAGGA 59.928 52.381 0.00 0.00 36.56 3.36
840 841 1.071699 TCCTCGTTCTTTGGTGGAAGG 59.928 52.381 0.00 0.00 0.00 3.46
841 842 2.543777 TCCTCGTTCTTTGGTGGAAG 57.456 50.000 0.00 0.00 0.00 3.46
842 843 2.105821 ACATCCTCGTTCTTTGGTGGAA 59.894 45.455 0.00 0.00 0.00 3.53
843 844 1.697432 ACATCCTCGTTCTTTGGTGGA 59.303 47.619 0.00 0.00 0.00 4.02
844 845 2.185004 ACATCCTCGTTCTTTGGTGG 57.815 50.000 0.00 0.00 0.00 4.61
845 846 5.334879 CCTTTAACATCCTCGTTCTTTGGTG 60.335 44.000 0.00 0.00 0.00 4.17
846 847 4.760204 CCTTTAACATCCTCGTTCTTTGGT 59.240 41.667 0.00 0.00 0.00 3.67
847 848 5.001232 TCCTTTAACATCCTCGTTCTTTGG 58.999 41.667 0.00 0.00 0.00 3.28
848 849 6.371548 TCATCCTTTAACATCCTCGTTCTTTG 59.628 38.462 0.00 0.00 0.00 2.77
849 850 6.472887 TCATCCTTTAACATCCTCGTTCTTT 58.527 36.000 0.00 0.00 0.00 2.52
850 851 6.049955 TCATCCTTTAACATCCTCGTTCTT 57.950 37.500 0.00 0.00 0.00 2.52
851 852 5.187967 ACTCATCCTTTAACATCCTCGTTCT 59.812 40.000 0.00 0.00 0.00 3.01
852 853 5.420409 ACTCATCCTTTAACATCCTCGTTC 58.580 41.667 0.00 0.00 0.00 3.95
853 854 5.422214 ACTCATCCTTTAACATCCTCGTT 57.578 39.130 0.00 0.00 0.00 3.85
854 855 5.422214 AACTCATCCTTTAACATCCTCGT 57.578 39.130 0.00 0.00 0.00 4.18
855 856 6.743575 AAAACTCATCCTTTAACATCCTCG 57.256 37.500 0.00 0.00 0.00 4.63
1010 1553 2.490217 CCGAGTTCGCATCCGAGT 59.510 61.111 0.00 0.00 45.35 4.18
1096 1717 7.795047 AGATCCAATTGGTCAAAGAAGTTTTT 58.205 30.769 23.76 0.00 36.34 1.94
1547 2388 2.958355 CCCCTCGTATTGCCATTCAAAT 59.042 45.455 0.00 0.00 38.34 2.32
1651 2494 6.360844 TCTCATAGCGAACTAAGTACACTC 57.639 41.667 0.00 0.00 30.45 3.51
1661 2504 6.520272 ATGAGCTAATTTCTCATAGCGAACT 58.480 36.000 16.59 0.00 46.22 3.01
1706 2549 7.448420 CACACTCCTTATGATCATGACCTATT 58.552 38.462 18.72 0.00 0.00 1.73
1789 2632 0.965866 CTGTCCTGGTCTAGACGGCA 60.966 60.000 16.56 9.73 35.71 5.69
1866 2715 2.561419 CCTTTCTTGGTACAGACGGAGA 59.439 50.000 0.00 0.00 42.39 3.71
1917 2766 0.468226 TGTTTCAGAGGGCTTGTCGT 59.532 50.000 0.00 0.00 0.00 4.34
1948 2797 2.096496 GCATCTTTGTCAACCTCCATCG 59.904 50.000 0.00 0.00 0.00 3.84
1971 2821 4.368315 TCATCCATATTCAGACGTTTCCG 58.632 43.478 0.00 0.00 40.83 4.30
2178 3028 3.876914 GAGGATAATCATTGTGTTCGGCA 59.123 43.478 0.00 0.00 0.00 5.69
2183 3033 4.276678 CCATGCGAGGATAATCATTGTGTT 59.723 41.667 0.00 0.00 0.00 3.32
2193 3043 1.953559 GCAGTTCCATGCGAGGATAA 58.046 50.000 0.00 0.00 37.56 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.