Multiple sequence alignment - TraesCS2A01G088900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G088900 chr2A 100.000 6563 0 0 999 7561 42162132 42155570 0.000000e+00 12120.0
1 TraesCS2A01G088900 chr2A 100.000 620 0 0 1 620 42163130 42162511 0.000000e+00 1146.0
2 TraesCS2A01G088900 chr2A 78.481 158 20 11 7231 7380 445716900 445716749 2.910000e-14 91.6
3 TraesCS2A01G088900 chr2B 92.956 4841 215 66 1805 6592 64996815 64992048 0.000000e+00 6935.0
4 TraesCS2A01G088900 chr2B 86.283 678 35 21 1015 1681 64997315 64996685 0.000000e+00 684.0
5 TraesCS2A01G088900 chr2B 91.624 394 16 7 6731 7111 64991705 64991316 5.200000e-146 529.0
6 TraesCS2A01G088900 chr2B 88.636 264 9 6 269 525 64997833 64997584 1.230000e-77 302.0
7 TraesCS2A01G088900 chr2B 91.089 101 5 1 7124 7224 64991173 64991077 4.760000e-27 134.0
8 TraesCS2A01G088900 chr2B 94.937 79 4 0 4676 4754 64993844 64993766 2.860000e-24 124.0
9 TraesCS2A01G088900 chr2D 95.794 3828 117 24 2787 6584 37259416 37255603 0.000000e+00 6137.0
10 TraesCS2A01G088900 chr2D 92.346 1594 100 12 1234 2820 37261006 37259428 0.000000e+00 2248.0
11 TraesCS2A01G088900 chr2D 81.435 641 66 22 6946 7556 37255063 37254446 6.870000e-130 475.0
12 TraesCS2A01G088900 chr2D 88.095 378 23 9 208 570 37261797 37261427 5.420000e-116 429.0
13 TraesCS2A01G088900 chr2D 90.517 116 6 2 6780 6895 37255402 37255292 1.700000e-31 148.0
14 TraesCS2A01G088900 chr2D 91.176 68 6 0 1 68 37261922 37261855 8.080000e-15 93.5
15 TraesCS2A01G088900 chr4B 81.941 1772 283 30 2897 4648 414861911 414863665 0.000000e+00 1465.0
16 TraesCS2A01G088900 chr4B 83.217 143 21 3 1324 1464 414859498 414859639 2.210000e-25 128.0
17 TraesCS2A01G088900 chr4B 100.000 30 0 0 7353 7382 617691958 617691987 1.000000e-03 56.5
18 TraesCS2A01G088900 chr4D 81.618 1768 295 25 2897 4648 336660261 336662014 0.000000e+00 1437.0
19 TraesCS2A01G088900 chr4D 86.344 227 31 0 2517 2743 336659484 336659710 1.630000e-61 248.0
20 TraesCS2A01G088900 chr4D 84.615 143 19 3 1324 1464 336657996 336658137 1.020000e-28 139.0
21 TraesCS2A01G088900 chr4A 81.566 1763 301 21 2897 4646 136757458 136755707 0.000000e+00 1434.0
22 TraesCS2A01G088900 chr4A 85.903 227 32 0 2517 2743 136758234 136758008 7.580000e-60 243.0
23 TraesCS2A01G088900 chr4A 83.221 149 22 3 1324 1470 136759714 136759567 4.760000e-27 134.0
24 TraesCS2A01G088900 chr4A 80.916 131 17 2 5868 5990 642917729 642917599 6.240000e-16 97.1
25 TraesCS2A01G088900 chr4A 83.516 91 15 0 5900 5990 658153055 658153145 1.350000e-12 86.1
26 TraesCS2A01G088900 chr5B 74.271 1784 406 44 2897 4650 280462331 280464091 0.000000e+00 702.0
27 TraesCS2A01G088900 chr5B 79.710 138 19 8 7243 7375 155715206 155715073 2.910000e-14 91.6
28 TraesCS2A01G088900 chr5D 74.118 1785 408 44 2897 4650 245769754 245771515 0.000000e+00 688.0
29 TraesCS2A01G088900 chr5D 85.227 88 13 0 5866 5953 80206230 80206143 2.910000e-14 91.6
30 TraesCS2A01G088900 chr5A 73.950 1785 411 43 2897 4650 329825628 329827389 0.000000e+00 671.0
31 TraesCS2A01G088900 chr1A 81.366 644 103 12 4016 4648 35507257 35507894 6.770000e-140 508.0
32 TraesCS2A01G088900 chr1B 81.098 492 92 1 4158 4648 55953601 55954092 7.110000e-105 392.0
33 TraesCS2A01G088900 chr1B 80.691 492 94 1 4158 4648 55942347 55942838 1.540000e-101 381.0
34 TraesCS2A01G088900 chr1B 78.125 128 20 4 7256 7380 100555544 100555422 2.930000e-09 75.0
35 TraesCS2A01G088900 chr7B 80.882 136 18 2 5863 5990 479759719 479759854 4.830000e-17 100.0
36 TraesCS2A01G088900 chr3D 85.714 91 13 0 5863 5953 65439289 65439379 6.240000e-16 97.1
37 TraesCS2A01G088900 chr3D 85.714 91 13 0 5863 5953 535486689 535486779 6.240000e-16 97.1
38 TraesCS2A01G088900 chr6B 79.412 136 20 2 5863 5990 52458713 52458848 1.040000e-13 89.8
39 TraesCS2A01G088900 chr7D 96.970 33 1 0 7353 7385 460269472 460269440 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G088900 chr2A 42155570 42163130 7560 True 6633.000000 12120 100.000000 1 7561 2 chr2A.!!$R2 7560
1 TraesCS2A01G088900 chr2B 64991077 64997833 6756 True 1451.333333 6935 90.920833 269 7224 6 chr2B.!!$R1 6955
2 TraesCS2A01G088900 chr2D 37254446 37261922 7476 True 1588.416667 6137 89.893833 1 7556 6 chr2D.!!$R1 7555
3 TraesCS2A01G088900 chr4B 414859498 414863665 4167 False 796.500000 1465 82.579000 1324 4648 2 chr4B.!!$F2 3324
4 TraesCS2A01G088900 chr4D 336657996 336662014 4018 False 608.000000 1437 84.192333 1324 4648 3 chr4D.!!$F1 3324
5 TraesCS2A01G088900 chr4A 136755707 136759714 4007 True 603.666667 1434 83.563333 1324 4646 3 chr4A.!!$R2 3322
6 TraesCS2A01G088900 chr5B 280462331 280464091 1760 False 702.000000 702 74.271000 2897 4650 1 chr5B.!!$F1 1753
7 TraesCS2A01G088900 chr5D 245769754 245771515 1761 False 688.000000 688 74.118000 2897 4650 1 chr5D.!!$F1 1753
8 TraesCS2A01G088900 chr5A 329825628 329827389 1761 False 671.000000 671 73.950000 2897 4650 1 chr5A.!!$F1 1753
9 TraesCS2A01G088900 chr1A 35507257 35507894 637 False 508.000000 508 81.366000 4016 4648 1 chr1A.!!$F1 632

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
396 413 0.173481 GCAGACAGTAGCACATCGGA 59.827 55.000 0.00 0.00 0.00 4.55 F
1164 1209 0.322456 TCCCTGCTGTTTCGGATTGG 60.322 55.000 0.00 0.00 0.00 3.16 F
2167 2799 0.105964 CCAATGCCCAATCCATGCAG 59.894 55.000 0.00 0.00 38.58 4.41 F
2380 3363 0.844661 ACTTGGGGATGGGTGCAGTA 60.845 55.000 0.00 0.00 0.00 2.74 F
2400 3383 1.949525 ACTTGTGCTGTTTGTGGCTAG 59.050 47.619 0.00 0.00 0.00 3.42 F
2802 4011 2.351418 GCAAACTTTTTGTTGCTGACCC 59.649 45.455 1.26 0.00 39.13 4.46 F
3374 4764 2.485124 GCCATGACAGATCCTGGAGAAG 60.485 54.545 1.52 0.00 41.85 2.85 F
3701 5093 3.490348 CATCCTCTCAACCAGGTTTGTT 58.510 45.455 0.44 0.00 32.20 2.83 F
5262 6687 3.909776 CAGTTTTCAGCTGCTGATCAA 57.090 42.857 30.80 22.86 40.39 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2017 2146 0.554865 TCCCCAGGTTCCATTCCCAT 60.555 55.000 0.00 0.00 0.00 4.00 R
2363 3346 0.844661 AGTACTGCACCCATCCCCAA 60.845 55.000 0.00 0.00 0.00 4.12 R
3310 4700 1.215423 AGCACCTTTGGTTCCTTCACT 59.785 47.619 0.00 0.00 31.02 3.41 R
3701 5093 3.648067 ACAAAAGACAGGTGGATCAGAGA 59.352 43.478 0.00 0.00 0.00 3.10 R
3727 5119 8.106462 TCAGAAAAGGATAATGTGTGACCATTA 58.894 33.333 8.30 8.30 40.52 1.90 R
4900 6323 3.626028 AAGTGAAAACGGCTGAATCAC 57.374 42.857 16.82 16.82 40.45 3.06 R
5388 6813 0.033920 CCCCTTGCTTTGGCTCAAAC 59.966 55.000 0.00 0.00 39.59 2.93 R
5391 6816 0.480690 TAACCCCTTGCTTTGGCTCA 59.519 50.000 0.00 0.00 39.59 4.26 R
6684 8201 0.035458 CCAGATCCGGCACCCTATTC 59.965 60.000 0.00 0.00 0.00 1.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.135972 CACCTGTGCTTACGTGATTGC 60.136 52.381 0.00 0.00 0.00 3.56
29 30 1.270839 ACCTGTGCTTACGTGATTGCT 60.271 47.619 0.00 0.00 0.00 3.91
44 45 4.455533 GTGATTGCTCCTTGTATTGTCACA 59.544 41.667 0.00 0.00 34.98 3.58
46 47 5.711506 TGATTGCTCCTTGTATTGTCACATT 59.288 36.000 0.00 0.00 0.00 2.71
58 59 8.628630 TGTATTGTCACATTGATCCTTTTGTA 57.371 30.769 0.00 0.00 0.00 2.41
64 65 6.803320 GTCACATTGATCCTTTTGTATGTGTG 59.197 38.462 0.00 0.00 41.99 3.82
76 87 4.873768 TGTATGTGTGTGTTTCACTGTG 57.126 40.909 0.17 0.17 46.27 3.66
85 96 5.012664 TGTGTGTTTCACTGTGACCCTATAT 59.987 40.000 10.56 0.00 46.27 0.86
86 97 5.351465 GTGTGTTTCACTGTGACCCTATATG 59.649 44.000 10.56 0.00 43.13 1.78
93 104 7.194112 TCACTGTGACCCTATATGATTTTCA 57.806 36.000 6.36 0.00 0.00 2.69
95 106 7.050377 CACTGTGACCCTATATGATTTTCAGT 58.950 38.462 0.32 0.00 0.00 3.41
96 107 7.225538 CACTGTGACCCTATATGATTTTCAGTC 59.774 40.741 0.32 0.00 0.00 3.51
102 113 6.062095 CCCTATATGATTTTCAGTCCGGTTT 58.938 40.000 0.00 0.00 0.00 3.27
107 118 5.432885 TGATTTTCAGTCCGGTTTTCTTC 57.567 39.130 0.00 0.00 0.00 2.87
110 121 2.607631 TCAGTCCGGTTTTCTTCGTT 57.392 45.000 0.00 0.00 0.00 3.85
111 122 2.476821 TCAGTCCGGTTTTCTTCGTTC 58.523 47.619 0.00 0.00 0.00 3.95
112 123 1.529865 CAGTCCGGTTTTCTTCGTTCC 59.470 52.381 0.00 0.00 0.00 3.62
113 124 0.870393 GTCCGGTTTTCTTCGTTCCC 59.130 55.000 0.00 0.00 0.00 3.97
114 125 0.250424 TCCGGTTTTCTTCGTTCCCC 60.250 55.000 0.00 0.00 0.00 4.81
115 126 1.239296 CCGGTTTTCTTCGTTCCCCC 61.239 60.000 0.00 0.00 0.00 5.40
116 127 0.535553 CGGTTTTCTTCGTTCCCCCA 60.536 55.000 0.00 0.00 0.00 4.96
117 128 1.694844 GGTTTTCTTCGTTCCCCCAA 58.305 50.000 0.00 0.00 0.00 4.12
118 129 2.033372 GGTTTTCTTCGTTCCCCCAAA 58.967 47.619 0.00 0.00 0.00 3.28
119 130 2.431419 GGTTTTCTTCGTTCCCCCAAAA 59.569 45.455 0.00 0.00 0.00 2.44
120 131 3.118702 GGTTTTCTTCGTTCCCCCAAAAA 60.119 43.478 0.00 0.00 0.00 1.94
154 165 8.380742 AGAAAAACTCTTATCCTACATCTCCA 57.619 34.615 0.00 0.00 0.00 3.86
155 166 8.826765 AGAAAAACTCTTATCCTACATCTCCAA 58.173 33.333 0.00 0.00 0.00 3.53
156 167 8.794335 AAAAACTCTTATCCTACATCTCCAAC 57.206 34.615 0.00 0.00 0.00 3.77
157 168 7.496346 AAACTCTTATCCTACATCTCCAACA 57.504 36.000 0.00 0.00 0.00 3.33
158 169 6.472686 ACTCTTATCCTACATCTCCAACAC 57.527 41.667 0.00 0.00 0.00 3.32
159 170 5.958380 ACTCTTATCCTACATCTCCAACACA 59.042 40.000 0.00 0.00 0.00 3.72
160 171 6.440647 ACTCTTATCCTACATCTCCAACACAA 59.559 38.462 0.00 0.00 0.00 3.33
161 172 6.640518 TCTTATCCTACATCTCCAACACAAC 58.359 40.000 0.00 0.00 0.00 3.32
162 173 4.908601 ATCCTACATCTCCAACACAACA 57.091 40.909 0.00 0.00 0.00 3.33
163 174 4.698201 TCCTACATCTCCAACACAACAA 57.302 40.909 0.00 0.00 0.00 2.83
164 175 4.641396 TCCTACATCTCCAACACAACAAG 58.359 43.478 0.00 0.00 0.00 3.16
165 176 4.346709 TCCTACATCTCCAACACAACAAGA 59.653 41.667 0.00 0.00 0.00 3.02
166 177 5.013079 TCCTACATCTCCAACACAACAAGAT 59.987 40.000 0.00 0.00 0.00 2.40
167 178 5.352569 CCTACATCTCCAACACAACAAGATC 59.647 44.000 0.00 0.00 0.00 2.75
168 179 4.717877 ACATCTCCAACACAACAAGATCA 58.282 39.130 0.00 0.00 0.00 2.92
169 180 5.132502 ACATCTCCAACACAACAAGATCAA 58.867 37.500 0.00 0.00 0.00 2.57
170 181 5.009010 ACATCTCCAACACAACAAGATCAAC 59.991 40.000 0.00 0.00 0.00 3.18
171 182 4.780815 TCTCCAACACAACAAGATCAACT 58.219 39.130 0.00 0.00 0.00 3.16
172 183 4.576053 TCTCCAACACAACAAGATCAACTG 59.424 41.667 0.00 0.00 0.00 3.16
173 184 3.631686 TCCAACACAACAAGATCAACTGG 59.368 43.478 0.00 0.00 0.00 4.00
174 185 3.631686 CCAACACAACAAGATCAACTGGA 59.368 43.478 0.00 0.00 0.00 3.86
175 186 4.097741 CCAACACAACAAGATCAACTGGAA 59.902 41.667 0.00 0.00 0.00 3.53
176 187 5.276270 CAACACAACAAGATCAACTGGAAG 58.724 41.667 0.00 0.00 42.29 3.46
190 201 2.738587 TGGAAGTGCCAAGTTACCAA 57.261 45.000 0.00 0.00 45.87 3.67
191 202 2.303175 TGGAAGTGCCAAGTTACCAAC 58.697 47.619 0.00 0.00 45.87 3.77
192 203 2.092103 TGGAAGTGCCAAGTTACCAACT 60.092 45.455 0.00 0.00 45.87 3.16
193 204 3.136809 TGGAAGTGCCAAGTTACCAACTA 59.863 43.478 0.00 0.00 45.87 2.24
194 205 4.202524 TGGAAGTGCCAAGTTACCAACTAT 60.203 41.667 0.00 0.00 45.87 2.12
195 206 4.395231 GGAAGTGCCAAGTTACCAACTATC 59.605 45.833 0.00 0.00 41.91 2.08
196 207 3.596214 AGTGCCAAGTTACCAACTATCG 58.404 45.455 0.00 0.00 41.91 2.92
197 208 2.095372 GTGCCAAGTTACCAACTATCGC 59.905 50.000 0.00 0.00 41.91 4.58
198 209 2.289756 TGCCAAGTTACCAACTATCGCA 60.290 45.455 0.00 0.00 41.91 5.10
199 210 2.351726 GCCAAGTTACCAACTATCGCAG 59.648 50.000 0.00 0.00 41.91 5.18
200 211 2.936498 CCAAGTTACCAACTATCGCAGG 59.064 50.000 0.00 0.00 41.91 4.85
201 212 2.936498 CAAGTTACCAACTATCGCAGGG 59.064 50.000 0.00 0.00 41.91 4.45
202 213 2.463752 AGTTACCAACTATCGCAGGGA 58.536 47.619 0.00 0.00 40.69 4.20
203 214 3.039011 AGTTACCAACTATCGCAGGGAT 58.961 45.455 5.16 5.16 40.69 3.85
206 217 3.963428 ACCAACTATCGCAGGGATATC 57.037 47.619 7.61 0.00 37.02 1.63
233 245 4.718940 ATCAATGGTTTTCAATCCGGTC 57.281 40.909 0.00 0.00 0.00 4.79
244 256 2.434336 TCAATCCGGTCTCCCACATAAG 59.566 50.000 0.00 0.00 0.00 1.73
250 262 1.771255 GGTCTCCCACATAAGCCAGAT 59.229 52.381 0.00 0.00 0.00 2.90
259 271 5.012458 CCCACATAAGCCAGATCAATCTCTA 59.988 44.000 0.00 0.00 34.22 2.43
261 273 7.166851 CCACATAAGCCAGATCAATCTCTATT 58.833 38.462 0.00 0.00 34.22 1.73
262 274 7.119407 CCACATAAGCCAGATCAATCTCTATTG 59.881 40.741 0.00 0.00 43.32 1.90
266 278 5.619220 AGCCAGATCAATCTCTATTGGAAC 58.381 41.667 0.00 0.00 42.40 3.62
271 283 4.672587 TCAATCTCTATTGGAACCGAGG 57.327 45.455 0.00 0.00 42.40 4.63
281 293 1.276989 TGGAACCGAGGTCAACATACC 59.723 52.381 0.00 0.00 40.06 2.73
326 340 6.256757 GGTGACCGATTCATCAAAAACAAAAA 59.743 34.615 0.00 0.00 35.12 1.94
378 395 3.202467 AACCACAACACGGTTGGC 58.798 55.556 17.36 0.00 45.11 4.52
379 396 1.679305 AACCACAACACGGTTGGCA 60.679 52.632 17.36 0.00 45.11 4.92
380 397 1.662438 AACCACAACACGGTTGGCAG 61.662 55.000 17.36 9.93 45.11 4.85
381 398 1.821759 CCACAACACGGTTGGCAGA 60.822 57.895 17.36 0.00 0.00 4.26
382 399 1.355210 CACAACACGGTTGGCAGAC 59.645 57.895 17.36 0.00 0.00 3.51
383 400 1.078072 ACAACACGGTTGGCAGACA 60.078 52.632 17.36 0.00 0.00 3.41
384 401 1.095228 ACAACACGGTTGGCAGACAG 61.095 55.000 17.36 0.00 0.00 3.51
385 402 1.095228 CAACACGGTTGGCAGACAGT 61.095 55.000 8.40 0.00 0.00 3.55
388 405 1.004918 ACGGTTGGCAGACAGTAGC 60.005 57.895 4.44 0.00 0.00 3.58
396 413 0.173481 GCAGACAGTAGCACATCGGA 59.827 55.000 0.00 0.00 0.00 4.55
502 525 2.942641 GGCCTCCCCGCATATAAAC 58.057 57.895 0.00 0.00 0.00 2.01
525 548 2.687200 CCGTCATCCTCCCCACCA 60.687 66.667 0.00 0.00 0.00 4.17
526 549 2.735772 CCGTCATCCTCCCCACCAG 61.736 68.421 0.00 0.00 0.00 4.00
543 577 4.389576 GTCCAAACGCGCTGCCAG 62.390 66.667 5.73 0.00 0.00 4.85
577 611 4.472310 CCCCTTCCCCATCCCCCT 62.472 72.222 0.00 0.00 0.00 4.79
578 612 2.778717 CCCTTCCCCATCCCCCTC 60.779 72.222 0.00 0.00 0.00 4.30
579 613 2.778717 CCTTCCCCATCCCCCTCC 60.779 72.222 0.00 0.00 0.00 4.30
580 614 2.778717 CTTCCCCATCCCCCTCCC 60.779 72.222 0.00 0.00 0.00 4.30
581 615 3.309509 TTCCCCATCCCCCTCCCT 61.310 66.667 0.00 0.00 0.00 4.20
582 616 3.362946 TTCCCCATCCCCCTCCCTC 62.363 68.421 0.00 0.00 0.00 4.30
583 617 4.928520 CCCCATCCCCCTCCCTCC 62.929 77.778 0.00 0.00 0.00 4.30
584 618 4.928520 CCCATCCCCCTCCCTCCC 62.929 77.778 0.00 0.00 0.00 4.30
585 619 4.928520 CCATCCCCCTCCCTCCCC 62.929 77.778 0.00 0.00 0.00 4.81
586 620 4.928520 CATCCCCCTCCCTCCCCC 62.929 77.778 0.00 0.00 0.00 5.40
612 646 4.534401 GCCCCACGAATCAGTACC 57.466 61.111 0.00 0.00 0.00 3.34
613 647 1.153229 GCCCCACGAATCAGTACCC 60.153 63.158 0.00 0.00 0.00 3.69
614 648 1.525442 CCCCACGAATCAGTACCCC 59.475 63.158 0.00 0.00 0.00 4.95
615 649 1.525442 CCCACGAATCAGTACCCCC 59.475 63.158 0.00 0.00 0.00 5.40
616 650 0.981277 CCCACGAATCAGTACCCCCT 60.981 60.000 0.00 0.00 0.00 4.79
617 651 0.464452 CCACGAATCAGTACCCCCTC 59.536 60.000 0.00 0.00 0.00 4.30
618 652 0.464452 CACGAATCAGTACCCCCTCC 59.536 60.000 0.00 0.00 0.00 4.30
619 653 0.690077 ACGAATCAGTACCCCCTCCC 60.690 60.000 0.00 0.00 0.00 4.30
1100 1145 4.104183 TCCGTTCCCCCGATTGGC 62.104 66.667 0.00 0.00 0.00 4.52
1102 1147 2.824041 CGTTCCCCCGATTGGCAG 60.824 66.667 0.00 0.00 0.00 4.85
1108 1153 0.834612 CCCCCGATTGGCAGTACTTA 59.165 55.000 0.00 0.00 0.00 2.24
1109 1154 1.202651 CCCCCGATTGGCAGTACTTAG 60.203 57.143 0.00 0.00 0.00 2.18
1110 1155 1.583054 CCCGATTGGCAGTACTTAGC 58.417 55.000 0.00 0.00 0.00 3.09
1111 1156 1.209128 CCGATTGGCAGTACTTAGCG 58.791 55.000 0.00 0.00 0.00 4.26
1112 1157 0.577269 CGATTGGCAGTACTTAGCGC 59.423 55.000 0.00 0.00 0.00 5.92
1114 1159 1.861575 GATTGGCAGTACTTAGCGCTC 59.138 52.381 16.34 0.00 0.00 5.03
1117 1162 2.231618 GCAGTACTTAGCGCTCGCC 61.232 63.158 16.34 0.77 43.17 5.54
1118 1163 1.433879 CAGTACTTAGCGCTCGCCT 59.566 57.895 16.34 3.33 43.17 5.52
1119 1164 0.592754 CAGTACTTAGCGCTCGCCTC 60.593 60.000 16.34 3.15 43.17 4.70
1139 1184 2.514824 GCGGGAGGCATGGTCTTC 60.515 66.667 0.00 0.00 42.87 2.87
1141 1186 1.144936 CGGGAGGCATGGTCTTCTC 59.855 63.158 0.00 0.00 0.00 2.87
1143 1188 1.144936 GGAGGCATGGTCTTCTCCG 59.855 63.158 0.00 0.00 36.78 4.63
1144 1189 1.522580 GAGGCATGGTCTTCTCCGC 60.523 63.158 0.00 0.00 0.00 5.54
1145 1190 1.965754 GAGGCATGGTCTTCTCCGCT 61.966 60.000 0.00 0.00 0.00 5.52
1146 1191 1.522580 GGCATGGTCTTCTCCGCTC 60.523 63.158 0.00 0.00 0.00 5.03
1147 1192 1.522580 GCATGGTCTTCTCCGCTCC 60.523 63.158 0.00 0.00 0.00 4.70
1148 1193 1.144936 CATGGTCTTCTCCGCTCCC 59.855 63.158 0.00 0.00 0.00 4.30
1149 1194 1.002274 ATGGTCTTCTCCGCTCCCT 59.998 57.895 0.00 0.00 0.00 4.20
1150 1195 1.333636 ATGGTCTTCTCCGCTCCCTG 61.334 60.000 0.00 0.00 0.00 4.45
1151 1196 2.185608 GTCTTCTCCGCTCCCTGC 59.814 66.667 0.00 0.00 38.57 4.85
1152 1197 2.038007 TCTTCTCCGCTCCCTGCT 59.962 61.111 0.00 0.00 40.11 4.24
1153 1198 2.186384 CTTCTCCGCTCCCTGCTG 59.814 66.667 0.00 0.00 40.11 4.41
1154 1199 2.604686 TTCTCCGCTCCCTGCTGT 60.605 61.111 0.00 0.00 40.11 4.40
1155 1200 2.177594 CTTCTCCGCTCCCTGCTGTT 62.178 60.000 0.00 0.00 40.11 3.16
1156 1201 1.768684 TTCTCCGCTCCCTGCTGTTT 61.769 55.000 0.00 0.00 40.11 2.83
1157 1202 1.743252 CTCCGCTCCCTGCTGTTTC 60.743 63.158 0.00 0.00 40.11 2.78
1158 1203 3.121030 CCGCTCCCTGCTGTTTCG 61.121 66.667 0.00 0.00 40.11 3.46
1159 1204 3.121030 CGCTCCCTGCTGTTTCGG 61.121 66.667 0.00 0.00 40.11 4.30
1160 1205 2.347490 GCTCCCTGCTGTTTCGGA 59.653 61.111 0.00 0.00 38.95 4.55
1161 1206 1.078143 GCTCCCTGCTGTTTCGGAT 60.078 57.895 0.00 0.00 38.95 4.18
1162 1207 0.678048 GCTCCCTGCTGTTTCGGATT 60.678 55.000 0.00 0.00 38.95 3.01
1163 1208 1.089920 CTCCCTGCTGTTTCGGATTG 58.910 55.000 0.00 0.00 0.00 2.67
1164 1209 0.322456 TCCCTGCTGTTTCGGATTGG 60.322 55.000 0.00 0.00 0.00 3.16
1165 1210 1.315257 CCCTGCTGTTTCGGATTGGG 61.315 60.000 0.00 0.00 0.00 4.12
1166 1211 1.508088 CTGCTGTTTCGGATTGGGC 59.492 57.895 0.00 0.00 0.00 5.36
1167 1212 2.257286 CTGCTGTTTCGGATTGGGCG 62.257 60.000 0.00 0.00 0.00 6.13
1168 1213 2.485122 CTGTTTCGGATTGGGCGC 59.515 61.111 0.00 0.00 0.00 6.53
1169 1214 3.381169 CTGTTTCGGATTGGGCGCG 62.381 63.158 0.00 0.00 0.00 6.86
1170 1215 4.829518 GTTTCGGATTGGGCGCGC 62.830 66.667 25.94 25.94 0.00 6.86
1478 1523 0.523966 CTTGGCGCCGAAATTGGTTA 59.476 50.000 23.90 0.00 0.00 2.85
1578 1679 0.968405 GCTGGGAAATTCTGCACCAA 59.032 50.000 0.00 0.00 0.00 3.67
1582 1683 2.971330 TGGGAAATTCTGCACCAATGTT 59.029 40.909 0.00 0.00 0.00 2.71
1584 1685 3.244976 GGAAATTCTGCACCAATGTTCG 58.755 45.455 0.00 0.00 0.00 3.95
1630 1731 1.892474 TGCTATGGGGTCTGTTTTTGC 59.108 47.619 0.00 0.00 0.00 3.68
1647 1748 0.462581 TGCCTGCTATGTAGTGCTGC 60.463 55.000 0.00 0.00 0.00 5.25
1665 1766 0.524180 GCTATTGCGCAAACTCTGGC 60.524 55.000 28.81 19.88 0.00 4.85
1723 1826 9.821662 CAATGACATACTGCATATACTGAATTG 57.178 33.333 0.00 0.00 0.00 2.32
1743 1869 7.121020 TGAATTGCAATGACATACCGCATATAT 59.879 33.333 13.82 0.00 31.67 0.86
1759 1885 7.044181 CCGCATATATTGATCTGGTTGATACT 58.956 38.462 0.00 0.00 35.14 2.12
1761 1887 9.586435 CGCATATATTGATCTGGTTGATACTTA 57.414 33.333 0.00 0.00 35.14 2.24
1824 1950 3.099141 TCTGAATTGCCCTGGGAAATTC 58.901 45.455 37.21 37.21 0.00 2.17
1831 1957 2.580322 TGCCCTGGGAAATTCTGTATCA 59.420 45.455 19.27 0.00 0.00 2.15
1899 2026 6.410942 TTGTCTGCTATGTAGTGCTGATAT 57.589 37.500 0.00 0.00 38.86 1.63
1905 2032 4.391216 GCTATGTAGTGCTGATATTGCCTG 59.609 45.833 0.00 0.00 0.00 4.85
1930 2057 4.169068 ACTCTGGTAGATACTGGTCTGGAT 59.831 45.833 0.00 0.00 0.00 3.41
1948 2075 3.564644 TGGATTCGCTGGACGTTTTTAAA 59.435 39.130 0.00 0.00 44.19 1.52
1967 2094 2.342650 CGCTTGTGTTGGGGATGGG 61.343 63.158 0.00 0.00 0.00 4.00
2004 2133 3.194542 AGACTGCGAACTTCTAGATGCTT 59.805 43.478 5.57 0.45 0.00 3.91
2015 2144 6.166982 ACTTCTAGATGCTTGTTTCAGTACC 58.833 40.000 5.57 0.00 0.00 3.34
2017 2146 6.109156 TCTAGATGCTTGTTTCAGTACCAA 57.891 37.500 0.00 0.00 0.00 3.67
2042 2172 2.617215 GGAACCTGGGGATGGGGT 60.617 66.667 0.00 0.00 0.00 4.95
2058 2188 1.209504 GGGGTATGAGTGCTTGTGCTA 59.790 52.381 0.00 0.00 40.48 3.49
2132 2764 7.050970 ACCGTATTCTAGATGCAGAATTGTA 57.949 36.000 4.45 0.00 41.46 2.41
2154 2786 5.391312 ACTGGAAAATTCTACACCAATGC 57.609 39.130 0.00 0.00 0.00 3.56
2165 2797 0.179067 CACCAATGCCCAATCCATGC 60.179 55.000 0.00 0.00 0.00 4.06
2167 2799 0.105964 CCAATGCCCAATCCATGCAG 59.894 55.000 0.00 0.00 38.58 4.41
2173 2805 2.960384 TGCCCAATCCATGCAGATTAAG 59.040 45.455 1.22 0.00 34.69 1.85
2174 2806 2.961062 GCCCAATCCATGCAGATTAAGT 59.039 45.455 1.22 0.00 34.69 2.24
2218 3194 6.576662 TGTTTTTGTTTGTTGTAGAGGTGA 57.423 33.333 0.00 0.00 0.00 4.02
2227 3203 3.521531 TGTTGTAGAGGTGATATTGCCCA 59.478 43.478 0.00 0.00 0.00 5.36
2231 3208 6.508030 TGTAGAGGTGATATTGCCCAAATA 57.492 37.500 0.00 0.00 35.21 1.40
2277 3254 3.181485 TGCTGAAAGTTTTTAACCCACCG 60.181 43.478 0.00 0.00 35.30 4.94
2345 3328 7.664552 TGGATGCTCCTTTGATTTATTGATT 57.335 32.000 4.21 0.00 37.46 2.57
2363 3346 5.565592 TGATTAGCAATGCGAATGAAACT 57.434 34.783 17.79 0.00 34.31 2.66
2374 3357 2.820178 GAATGAAACTTGGGGATGGGT 58.180 47.619 0.00 0.00 0.00 4.51
2380 3363 0.844661 ACTTGGGGATGGGTGCAGTA 60.845 55.000 0.00 0.00 0.00 2.74
2400 3383 1.949525 ACTTGTGCTGTTTGTGGCTAG 59.050 47.619 0.00 0.00 0.00 3.42
2470 3454 4.006989 TGCAACTATACGCCACATTTCTT 58.993 39.130 0.00 0.00 0.00 2.52
2802 4011 2.351418 GCAAACTTTTTGTTGCTGACCC 59.649 45.455 1.26 0.00 39.13 4.46
2847 4134 4.455533 TGCATACACCACTTCAGATTTCAC 59.544 41.667 0.00 0.00 0.00 3.18
2849 4136 5.124457 GCATACACCACTTCAGATTTCACAT 59.876 40.000 0.00 0.00 0.00 3.21
2853 4140 5.470098 ACACCACTTCAGATTTCACATACAC 59.530 40.000 0.00 0.00 0.00 2.90
2855 4142 6.205464 CACCACTTCAGATTTCACATACACTT 59.795 38.462 0.00 0.00 0.00 3.16
2856 4143 6.428159 ACCACTTCAGATTTCACATACACTTC 59.572 38.462 0.00 0.00 0.00 3.01
2922 4312 6.595326 CAGGCTGTTGTTTTCACTGATATAGA 59.405 38.462 6.28 0.00 0.00 1.98
3094 4484 4.201714 CCGCATACTGGTATAATTGCATCG 60.202 45.833 0.00 0.00 0.00 3.84
3238 4628 5.365314 ACCAAGGAAGGTTAAAAATGCAAGA 59.635 36.000 0.00 0.00 39.34 3.02
3310 4700 5.419155 TGTAAAAGGTGGAATTGTCACACAA 59.581 36.000 9.77 0.00 42.95 3.33
3374 4764 2.485124 GCCATGACAGATCCTGGAGAAG 60.485 54.545 1.52 0.00 41.85 2.85
3701 5093 3.490348 CATCCTCTCAACCAGGTTTGTT 58.510 45.455 0.44 0.00 32.20 2.83
3725 5117 4.389374 TCTGATCCACCTGTCTTTTGTTC 58.611 43.478 0.00 0.00 0.00 3.18
3727 5119 4.792068 TGATCCACCTGTCTTTTGTTCTT 58.208 39.130 0.00 0.00 0.00 2.52
4836 6259 6.758886 GCTCTCAACTAGATTTTAAGCTGCTA 59.241 38.462 0.90 0.00 32.41 3.49
5107 6532 5.491982 TGGCTCAAGTTAAAATCTCTCTCC 58.508 41.667 0.00 0.00 0.00 3.71
5112 6537 7.412455 GCTCAAGTTAAAATCTCTCTCCTTTCG 60.412 40.741 0.00 0.00 0.00 3.46
5262 6687 3.909776 CAGTTTTCAGCTGCTGATCAA 57.090 42.857 30.80 22.86 40.39 2.57
5370 6795 5.420409 AGTAAGCTGGCTGATGTAGTAAAC 58.580 41.667 0.00 0.00 0.00 2.01
5373 6798 4.651778 AGCTGGCTGATGTAGTAAACAAA 58.348 39.130 0.00 0.00 42.70 2.83
5388 6813 6.435428 AGTAAACAAAATTGCAGTTCCTACG 58.565 36.000 0.00 0.00 0.00 3.51
5391 6816 5.257082 ACAAAATTGCAGTTCCTACGTTT 57.743 34.783 0.00 0.00 0.00 3.60
5513 6938 5.927281 AAGTTGCAAGAATATGCCAAGAT 57.073 34.783 0.00 0.00 45.83 2.40
5560 6985 8.336235 TGAAACCTATCCAATTTGAGAAGGTAT 58.664 33.333 13.65 5.42 34.93 2.73
5568 6997 8.533569 TCCAATTTGAGAAGGTATTTATTCCC 57.466 34.615 0.00 0.00 0.00 3.97
5574 7003 9.768215 TTTGAGAAGGTATTTATTCCCAAATCT 57.232 29.630 0.00 0.00 30.98 2.40
5602 7031 6.376978 CATCAGCAAGTCTTAGGTTCAAAAG 58.623 40.000 0.00 0.00 0.00 2.27
5604 7033 5.885912 TCAGCAAGTCTTAGGTTCAAAAGTT 59.114 36.000 0.00 0.00 0.00 2.66
5615 7044 8.527567 TTAGGTTCAAAAGTTTTGTTCACAAG 57.472 30.769 24.00 0.66 37.15 3.16
5622 7061 6.944557 AAAGTTTTGTTCACAAGTGCTTAC 57.055 33.333 0.00 0.00 37.15 2.34
5631 7071 4.002982 TCACAAGTGCTTACATCCACATC 58.997 43.478 0.00 0.00 34.48 3.06
5739 7180 0.732571 CCGGATTAGCAAACATGCGT 59.267 50.000 0.00 0.00 40.27 5.24
5766 7207 1.198713 ACTACAGCATCCCAGAGGTG 58.801 55.000 0.00 0.00 39.05 4.00
5808 7249 2.281345 GCAGGCAGGATCATCCCG 60.281 66.667 0.00 0.00 37.19 5.14
5814 7255 1.457604 CAGGATCATCCCGGCCATT 59.542 57.895 2.24 0.00 37.19 3.16
5823 7264 2.676121 CCGGCCATTGCAACCTCA 60.676 61.111 0.00 0.00 40.13 3.86
6139 7580 4.329545 GGCACAAGGACCGGCTGA 62.330 66.667 0.00 0.00 0.00 4.26
6285 7726 2.163211 GTCGGTTTACTTCCGCTAGTCT 59.837 50.000 0.00 0.00 46.49 3.24
6287 7728 2.734492 CGGTTTACTTCCGCTAGTCTGG 60.734 54.545 0.00 0.00 41.48 3.86
6288 7729 2.418334 GGTTTACTTCCGCTAGTCTGGG 60.418 54.545 0.00 0.00 0.00 4.45
6289 7730 2.226962 TTACTTCCGCTAGTCTGGGT 57.773 50.000 0.00 0.00 0.00 4.51
6290 7731 1.760192 TACTTCCGCTAGTCTGGGTC 58.240 55.000 0.00 0.00 0.00 4.46
6291 7732 0.039911 ACTTCCGCTAGTCTGGGTCT 59.960 55.000 0.00 0.00 0.00 3.85
6292 7733 0.741915 CTTCCGCTAGTCTGGGTCTC 59.258 60.000 0.00 0.00 0.00 3.36
6320 7764 3.207669 GCCTTGCCGCATCTCCAG 61.208 66.667 0.00 0.00 0.00 3.86
6331 7775 2.611473 CGCATCTCCAGAACTCTGTTGT 60.611 50.000 6.01 0.00 42.27 3.32
6448 7895 4.052159 CTGGTCCTACAGTTATCTGCTG 57.948 50.000 0.51 0.00 44.77 4.41
6489 7942 3.423539 TGGAGTTGGAGGAATGAACAG 57.576 47.619 0.00 0.00 0.00 3.16
6556 8009 5.067805 GGTAGTGCCATCTTTTCCCTTTATG 59.932 44.000 0.00 0.00 37.17 1.90
6557 8010 3.448660 AGTGCCATCTTTTCCCTTTATGC 59.551 43.478 0.00 0.00 0.00 3.14
6584 8039 5.220815 GCATTGTCATCTTTCATCTCCAGTC 60.221 44.000 0.00 0.00 0.00 3.51
6585 8040 5.752036 TTGTCATCTTTCATCTCCAGTCT 57.248 39.130 0.00 0.00 0.00 3.24
6590 8045 5.957168 TCATCTTTCATCTCCAGTCTTCTCT 59.043 40.000 0.00 0.00 0.00 3.10
6596 8064 5.517924 TCATCTCCAGTCTTCTCTCTGAAT 58.482 41.667 0.00 0.00 33.71 2.57
6608 8076 5.201713 TCTCTCTGAATCTGTGACGTTTT 57.798 39.130 0.00 0.00 0.00 2.43
6612 8080 3.813166 TCTGAATCTGTGACGTTTTTCCC 59.187 43.478 0.00 0.00 0.00 3.97
6613 8081 2.882137 TGAATCTGTGACGTTTTTCCCC 59.118 45.455 0.00 0.00 0.00 4.81
6615 8132 0.841289 TCTGTGACGTTTTTCCCCCT 59.159 50.000 0.00 0.00 0.00 4.79
6621 8138 3.688185 GTGACGTTTTTCCCCCTAGATTC 59.312 47.826 0.00 0.00 0.00 2.52
6628 8145 6.575649 CGTTTTTCCCCCTAGATTCTTAGTCA 60.576 42.308 0.00 0.00 0.00 3.41
6647 8164 1.072965 CAGGCTCAAAGAGGTGAGGTT 59.927 52.381 4.49 0.00 44.43 3.50
6648 8165 1.777272 AGGCTCAAAGAGGTGAGGTTT 59.223 47.619 4.49 0.00 44.43 3.27
6653 8170 2.031120 CAAAGAGGTGAGGTTTTGGCA 58.969 47.619 0.00 0.00 0.00 4.92
6654 8171 2.629617 CAAAGAGGTGAGGTTTTGGCAT 59.370 45.455 0.00 0.00 0.00 4.40
6655 8172 2.683211 AGAGGTGAGGTTTTGGCATT 57.317 45.000 0.00 0.00 0.00 3.56
6656 8173 2.962859 AGAGGTGAGGTTTTGGCATTT 58.037 42.857 0.00 0.00 0.00 2.32
6657 8174 2.893489 AGAGGTGAGGTTTTGGCATTTC 59.107 45.455 0.00 0.00 0.00 2.17
6658 8175 2.893489 GAGGTGAGGTTTTGGCATTTCT 59.107 45.455 0.00 0.00 0.00 2.52
6659 8176 4.079253 GAGGTGAGGTTTTGGCATTTCTA 58.921 43.478 0.00 0.00 0.00 2.10
6661 8178 5.086621 AGGTGAGGTTTTGGCATTTCTATT 58.913 37.500 0.00 0.00 0.00 1.73
6662 8179 5.185828 AGGTGAGGTTTTGGCATTTCTATTC 59.814 40.000 0.00 0.00 0.00 1.75
6663 8180 5.410924 GTGAGGTTTTGGCATTTCTATTCC 58.589 41.667 0.00 0.00 0.00 3.01
6664 8181 5.185828 GTGAGGTTTTGGCATTTCTATTCCT 59.814 40.000 0.00 0.00 0.00 3.36
6665 8182 6.377146 GTGAGGTTTTGGCATTTCTATTCCTA 59.623 38.462 0.00 0.00 0.00 2.94
6666 8183 6.951198 TGAGGTTTTGGCATTTCTATTCCTAA 59.049 34.615 0.00 0.00 0.00 2.69
6667 8184 7.122650 TGAGGTTTTGGCATTTCTATTCCTAAG 59.877 37.037 0.00 0.00 0.00 2.18
6668 8185 6.042777 GGTTTTGGCATTTCTATTCCTAAGC 58.957 40.000 0.00 0.00 0.00 3.09
6669 8186 5.852282 TTTGGCATTTCTATTCCTAAGCC 57.148 39.130 0.00 0.00 41.15 4.35
6671 8188 4.464008 TGGCATTTCTATTCCTAAGCCAG 58.536 43.478 0.00 0.00 45.10 4.85
6672 8189 4.689705 TGGCATTTCTATTCCTAAGCCAGG 60.690 45.833 0.00 0.00 45.10 4.45
6673 8190 3.254411 GCATTTCTATTCCTAAGCCAGGC 59.746 47.826 1.84 1.84 45.10 4.85
6674 8191 4.464008 CATTTCTATTCCTAAGCCAGGCA 58.536 43.478 15.80 0.00 45.10 4.75
6675 8192 3.560636 TTCTATTCCTAAGCCAGGCAC 57.439 47.619 15.80 0.00 45.10 5.01
6676 8193 2.764269 TCTATTCCTAAGCCAGGCACT 58.236 47.619 15.80 2.24 45.10 4.40
6677 8194 2.700897 TCTATTCCTAAGCCAGGCACTC 59.299 50.000 15.80 0.00 45.10 3.51
6678 8195 0.548510 ATTCCTAAGCCAGGCACTCC 59.451 55.000 15.80 0.00 45.10 3.85
6679 8196 0.840288 TTCCTAAGCCAGGCACTCCA 60.840 55.000 15.80 0.00 45.10 3.86
6680 8197 1.222936 CCTAAGCCAGGCACTCCAG 59.777 63.158 15.80 2.53 37.70 3.86
6681 8198 1.222936 CTAAGCCAGGCACTCCAGG 59.777 63.158 15.80 0.00 41.65 4.45
6685 8202 3.324930 CCAGGCACTCCAGGCAGA 61.325 66.667 0.00 0.00 34.60 4.26
6686 8203 2.752358 CAGGCACTCCAGGCAGAA 59.248 61.111 0.00 0.00 34.60 3.02
6687 8204 1.302285 CAGGCACTCCAGGCAGAAT 59.698 57.895 0.00 0.00 34.60 2.40
6688 8205 0.543277 CAGGCACTCCAGGCAGAATA 59.457 55.000 0.00 0.00 34.60 1.75
6689 8206 0.835941 AGGCACTCCAGGCAGAATAG 59.164 55.000 0.00 0.00 36.37 1.73
6690 8207 0.179034 GGCACTCCAGGCAGAATAGG 60.179 60.000 0.00 0.00 0.00 2.57
6691 8208 0.179034 GCACTCCAGGCAGAATAGGG 60.179 60.000 0.00 0.00 0.00 3.53
6692 8209 1.207791 CACTCCAGGCAGAATAGGGT 58.792 55.000 0.00 0.00 0.00 4.34
6693 8210 1.134280 CACTCCAGGCAGAATAGGGTG 60.134 57.143 0.00 0.00 0.00 4.61
6694 8211 0.179034 CTCCAGGCAGAATAGGGTGC 60.179 60.000 0.00 0.00 39.08 5.01
6702 8219 1.051812 AGAATAGGGTGCCGGATCTG 58.948 55.000 5.05 0.00 0.00 2.90
6716 8233 0.933796 GATCTGGAGCGCAGTTTAGC 59.066 55.000 11.47 0.00 0.00 3.09
6723 8240 2.762535 AGCGCAGTTTAGCTCCTAAA 57.237 45.000 11.47 0.00 39.98 1.85
6726 8243 4.766375 AGCGCAGTTTAGCTCCTAAAATA 58.234 39.130 11.47 0.00 39.98 1.40
6728 8245 5.823045 AGCGCAGTTTAGCTCCTAAAATAAT 59.177 36.000 11.47 0.00 39.98 1.28
6729 8246 5.909610 GCGCAGTTTAGCTCCTAAAATAATG 59.090 40.000 0.30 0.00 37.62 1.90
6822 8554 6.073003 CGAGGCAAGATCAAGTATTTTATCCC 60.073 42.308 0.00 0.00 0.00 3.85
6835 8567 1.028330 TTATCCCGCGTCGTCAGACT 61.028 55.000 4.92 0.00 44.93 3.24
6838 8570 2.098680 CCGCGTCGTCAGACTCTC 59.901 66.667 4.92 0.00 44.93 3.20
6919 8654 3.560068 GGATAACCGCCACTTGATTGTAG 59.440 47.826 0.00 0.00 0.00 2.74
7002 8916 1.915614 GCGGCATGTGAGTCTTGGTG 61.916 60.000 0.00 0.00 0.00 4.17
7003 8917 0.320683 CGGCATGTGAGTCTTGGTGA 60.321 55.000 0.00 0.00 0.00 4.02
7006 8922 2.939103 GGCATGTGAGTCTTGGTGATAC 59.061 50.000 0.00 0.00 0.00 2.24
7042 8963 7.928908 TTAAAGAAAAATACTGTTGCTGCTG 57.071 32.000 0.00 0.00 0.00 4.41
7070 8991 1.303155 AACTGCTCTGCTTCTGGGC 60.303 57.895 0.00 0.00 0.00 5.36
7121 9196 7.958053 ATTATTACGAGGTATAAGTTGCACC 57.042 36.000 0.00 0.53 0.00 5.01
7122 9197 4.804868 TTACGAGGTATAAGTTGCACCA 57.195 40.909 9.61 0.00 34.62 4.17
7123 9198 2.968675 ACGAGGTATAAGTTGCACCAC 58.031 47.619 9.61 3.65 34.62 4.16
7124 9199 2.300723 ACGAGGTATAAGTTGCACCACA 59.699 45.455 9.61 0.00 34.62 4.17
7125 9200 3.244284 ACGAGGTATAAGTTGCACCACAA 60.244 43.478 9.61 0.00 34.62 3.33
7126 9201 3.370978 CGAGGTATAAGTTGCACCACAAG 59.629 47.826 9.61 0.00 39.50 3.16
7127 9202 4.324267 GAGGTATAAGTTGCACCACAAGT 58.676 43.478 9.61 0.00 44.05 3.16
7128 9203 5.484715 GAGGTATAAGTTGCACCACAAGTA 58.515 41.667 9.61 0.00 41.21 2.24
7134 9209 5.337578 AAGTTGCACCACAAGTAAACAAT 57.662 34.783 0.00 0.00 41.21 2.71
7219 9309 0.178964 TTTTCAAGGAGGTGGCTGGG 60.179 55.000 0.00 0.00 0.00 4.45
7229 9319 1.639635 GGTGGCTGGGTCTCATCCAT 61.640 60.000 0.00 0.00 42.79 3.41
7230 9320 0.257039 GTGGCTGGGTCTCATCCATT 59.743 55.000 0.00 0.00 42.79 3.16
7244 9334 2.178912 TCCATTCCCTTCGTTCACAC 57.821 50.000 0.00 0.00 0.00 3.82
7246 9336 2.158740 TCCATTCCCTTCGTTCACACAA 60.159 45.455 0.00 0.00 0.00 3.33
7250 9340 5.125417 CCATTCCCTTCGTTCACACAAATAT 59.875 40.000 0.00 0.00 0.00 1.28
7251 9341 6.317642 CCATTCCCTTCGTTCACACAAATATA 59.682 38.462 0.00 0.00 0.00 0.86
7253 9343 6.978343 TCCCTTCGTTCACACAAATATAAG 57.022 37.500 0.00 0.00 0.00 1.73
7256 9346 6.403200 CCCTTCGTTCACACAAATATAAGGTG 60.403 42.308 0.00 0.00 38.47 4.00
7261 9351 6.580791 CGTTCACACAAATATAAGGTGTTTGG 59.419 38.462 4.70 0.00 42.72 3.28
7264 9354 7.825681 TCACACAAATATAAGGTGTTTGGATG 58.174 34.615 4.70 1.85 42.72 3.51
7268 9358 9.139174 CACAAATATAAGGTGTTTGGATGTTTC 57.861 33.333 0.00 0.00 41.59 2.78
7269 9359 8.026607 ACAAATATAAGGTGTTTGGATGTTTCG 58.973 33.333 0.00 0.00 41.59 3.46
7276 9366 7.553881 AGGTGTTTGGATGTTTCGATATAAG 57.446 36.000 0.00 0.00 0.00 1.73
7280 9370 8.875803 GTGTTTGGATGTTTCGATATAAGTGTA 58.124 33.333 0.00 0.00 0.00 2.90
7284 9374 9.740239 TTGGATGTTTCGATATAAGTGTAGTAC 57.260 33.333 0.00 0.00 0.00 2.73
7292 9382 8.471361 TCGATATAAGTGTAGTACATACGGAG 57.529 38.462 6.21 0.00 37.17 4.63
7299 9389 6.561614 AGTGTAGTACATACGGAGTGAAATG 58.438 40.000 6.21 0.00 45.73 2.32
7300 9390 5.747197 GTGTAGTACATACGGAGTGAAATGG 59.253 44.000 6.21 0.00 45.73 3.16
7302 9392 3.773119 AGTACATACGGAGTGAAATGGGT 59.227 43.478 0.00 0.00 45.73 4.51
7303 9393 2.985896 ACATACGGAGTGAAATGGGTG 58.014 47.619 0.00 0.00 45.73 4.61
7307 9397 1.142060 ACGGAGTGAAATGGGTGAACA 59.858 47.619 0.00 0.00 42.51 3.18
7312 9402 4.039124 GGAGTGAAATGGGTGAACAAACAT 59.961 41.667 0.00 0.00 0.00 2.71
7321 9411 6.062434 TGGGTGAACAAACATACTAAAACG 57.938 37.500 0.00 0.00 0.00 3.60
7324 9414 6.458615 GGGTGAACAAACATACTAAAACGTGT 60.459 38.462 0.00 0.00 0.00 4.49
7329 9419 7.412137 ACAAACATACTAAAACGTGTCTACC 57.588 36.000 0.00 0.00 0.00 3.18
7330 9420 6.985645 ACAAACATACTAAAACGTGTCTACCA 59.014 34.615 0.00 0.00 0.00 3.25
7331 9421 7.658575 ACAAACATACTAAAACGTGTCTACCAT 59.341 33.333 0.00 0.00 0.00 3.55
7333 9423 6.335777 ACATACTAAAACGTGTCTACCATCC 58.664 40.000 0.00 0.00 0.00 3.51
7334 9424 3.841643 ACTAAAACGTGTCTACCATCCG 58.158 45.455 0.00 0.00 0.00 4.18
7335 9425 2.088950 AAAACGTGTCTACCATCCGG 57.911 50.000 0.00 0.00 38.77 5.14
7337 9427 0.971386 AACGTGTCTACCATCCGGTT 59.029 50.000 0.00 0.00 46.31 4.44
7338 9428 0.529378 ACGTGTCTACCATCCGGTTC 59.471 55.000 0.00 0.00 46.31 3.62
7339 9429 0.528924 CGTGTCTACCATCCGGTTCA 59.471 55.000 0.00 0.00 46.31 3.18
7340 9430 1.734707 CGTGTCTACCATCCGGTTCAC 60.735 57.143 0.00 0.00 46.31 3.18
7341 9431 0.528924 TGTCTACCATCCGGTTCACG 59.471 55.000 0.00 0.00 46.31 4.35
7375 9469 7.657354 TGGAACATCTTATATTCATGAACGGAG 59.343 37.037 11.07 6.92 0.00 4.63
7397 9491 4.898861 AGGGAGTAGATGAGAATCACCTTC 59.101 45.833 0.00 0.00 32.33 3.46
7403 9497 3.584406 AGATGAGAATCACCTTCACACCA 59.416 43.478 0.00 0.00 32.33 4.17
7412 9506 5.867903 TCACCTTCACACCATTTGATTTT 57.132 34.783 0.00 0.00 0.00 1.82
7419 9513 7.334921 CCTTCACACCATTTGATTTTATGCAAT 59.665 33.333 0.00 0.00 0.00 3.56
7424 9518 9.233649 ACACCATTTGATTTTATGCAATGATTT 57.766 25.926 0.00 0.00 0.00 2.17
7425 9519 9.497030 CACCATTTGATTTTATGCAATGATTTG 57.503 29.630 0.00 0.00 35.85 2.32
7427 9521 9.497030 CCATTTGATTTTATGCAATGATTTGTG 57.503 29.630 0.00 0.00 35.17 3.33
7428 9522 9.005180 CATTTGATTTTATGCAATGATTTGTGC 57.995 29.630 0.00 0.00 41.29 4.57
7432 9526 4.446994 TTATGCAATGATTTGTGCGGAA 57.553 36.364 0.00 0.00 43.93 4.30
7434 9528 3.316071 TGCAATGATTTGTGCGGAATT 57.684 38.095 0.00 0.00 43.93 2.17
7436 9530 3.432592 TGCAATGATTTGTGCGGAATTTG 59.567 39.130 0.00 0.00 43.93 2.32
7439 9533 5.560567 GCAATGATTTGTGCGGAATTTGTTT 60.561 36.000 0.00 0.00 35.17 2.83
7440 9534 5.844301 ATGATTTGTGCGGAATTTGTTTC 57.156 34.783 0.00 0.00 0.00 2.78
7442 9536 5.355596 TGATTTGTGCGGAATTTGTTTCTT 58.644 33.333 0.00 0.00 34.56 2.52
7444 9538 4.377839 TTGTGCGGAATTTGTTTCTTCA 57.622 36.364 0.00 0.00 34.56 3.02
7448 9542 5.461737 TGTGCGGAATTTGTTTCTTCATTTC 59.538 36.000 0.00 0.00 34.56 2.17
7455 9550 9.108284 GGAATTTGTTTCTTCATTTCTTTCCAA 57.892 29.630 0.00 0.00 34.56 3.53
7462 9557 8.642020 GTTTCTTCATTTCTTTCCAATTGATCG 58.358 33.333 7.12 0.00 0.00 3.69
7482 9577 4.190772 TCGATCAAATGATGCAGCAGTTA 58.809 39.130 17.98 7.01 34.37 2.24
7489 9584 3.189618 TGATGCAGCAGTTAGATGAGG 57.810 47.619 0.00 0.00 35.00 3.86
7490 9585 1.872313 GATGCAGCAGTTAGATGAGGC 59.128 52.381 0.00 0.00 35.00 4.70
7491 9586 0.907486 TGCAGCAGTTAGATGAGGCT 59.093 50.000 0.00 0.00 35.00 4.58
7492 9587 1.280133 TGCAGCAGTTAGATGAGGCTT 59.720 47.619 0.00 0.00 35.00 4.35
7506 9601 5.426833 AGATGAGGCTTTGTTAGTCCTACAT 59.573 40.000 0.00 0.00 32.64 2.29
7531 9626 5.354234 ACGAGAATTAGCAAATCCGAATTGT 59.646 36.000 0.00 0.00 0.00 2.71
7537 9632 4.582701 AGCAAATCCGAATTGTCAAACA 57.417 36.364 0.00 0.00 0.00 2.83
7538 9633 5.138125 AGCAAATCCGAATTGTCAAACAT 57.862 34.783 0.00 0.00 0.00 2.71
7539 9634 4.925054 AGCAAATCCGAATTGTCAAACATG 59.075 37.500 0.00 0.00 0.00 3.21
7540 9635 4.091800 GCAAATCCGAATTGTCAAACATGG 59.908 41.667 0.00 0.00 0.00 3.66
7553 9648 5.163561 TGTCAAACATGGACAAAAACTCTCC 60.164 40.000 0.00 0.00 41.96 3.71
7558 9653 2.238521 TGGACAAAAACTCTCCATGGC 58.761 47.619 6.96 0.00 0.00 4.40
7559 9654 1.200020 GGACAAAAACTCTCCATGGCG 59.800 52.381 6.96 0.00 0.00 5.69
7560 9655 0.598065 ACAAAAACTCTCCATGGCGC 59.402 50.000 6.96 0.00 0.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 6.118170 AGGATCAATGTGACAATACAAGGAG 58.882 40.000 0.00 0.00 33.69 3.69
29 30 6.065976 AGGATCAATGTGACAATACAAGGA 57.934 37.500 0.00 0.00 33.69 3.36
44 45 6.899393 ACACACACATACAAAAGGATCAAT 57.101 33.333 0.00 0.00 0.00 2.57
46 47 6.319911 TGAAACACACACATACAAAAGGATCA 59.680 34.615 0.00 0.00 0.00 2.92
64 65 5.730550 TCATATAGGGTCACAGTGAAACAC 58.269 41.667 4.32 0.00 41.43 3.32
76 87 5.221661 ACCGGACTGAAAATCATATAGGGTC 60.222 44.000 9.46 0.00 0.00 4.46
85 96 4.024387 CGAAGAAAACCGGACTGAAAATCA 60.024 41.667 9.46 0.00 0.00 2.57
86 97 4.024302 ACGAAGAAAACCGGACTGAAAATC 60.024 41.667 9.46 0.00 0.00 2.17
93 104 1.541889 GGGAACGAAGAAAACCGGACT 60.542 52.381 9.46 0.00 0.00 3.85
95 106 0.250424 GGGGAACGAAGAAAACCGGA 60.250 55.000 9.46 0.00 0.00 5.14
96 107 1.239296 GGGGGAACGAAGAAAACCGG 61.239 60.000 0.00 0.00 0.00 5.28
128 139 9.488762 TGGAGATGTAGGATAAGAGTTTTTCTA 57.511 33.333 0.00 0.00 34.14 2.10
129 140 8.380742 TGGAGATGTAGGATAAGAGTTTTTCT 57.619 34.615 0.00 0.00 37.93 2.52
130 141 8.884726 GTTGGAGATGTAGGATAAGAGTTTTTC 58.115 37.037 0.00 0.00 0.00 2.29
131 142 8.383175 TGTTGGAGATGTAGGATAAGAGTTTTT 58.617 33.333 0.00 0.00 0.00 1.94
132 143 7.824779 GTGTTGGAGATGTAGGATAAGAGTTTT 59.175 37.037 0.00 0.00 0.00 2.43
133 144 7.038302 TGTGTTGGAGATGTAGGATAAGAGTTT 60.038 37.037 0.00 0.00 0.00 2.66
134 145 6.440647 TGTGTTGGAGATGTAGGATAAGAGTT 59.559 38.462 0.00 0.00 0.00 3.01
135 146 5.958380 TGTGTTGGAGATGTAGGATAAGAGT 59.042 40.000 0.00 0.00 0.00 3.24
136 147 6.471233 TGTGTTGGAGATGTAGGATAAGAG 57.529 41.667 0.00 0.00 0.00 2.85
137 148 6.212589 TGTTGTGTTGGAGATGTAGGATAAGA 59.787 38.462 0.00 0.00 0.00 2.10
138 149 6.406370 TGTTGTGTTGGAGATGTAGGATAAG 58.594 40.000 0.00 0.00 0.00 1.73
139 150 6.367374 TGTTGTGTTGGAGATGTAGGATAA 57.633 37.500 0.00 0.00 0.00 1.75
140 151 6.212589 TCTTGTTGTGTTGGAGATGTAGGATA 59.787 38.462 0.00 0.00 0.00 2.59
141 152 4.908601 TGTTGTGTTGGAGATGTAGGAT 57.091 40.909 0.00 0.00 0.00 3.24
142 153 4.346709 TCTTGTTGTGTTGGAGATGTAGGA 59.653 41.667 0.00 0.00 0.00 2.94
143 154 4.641396 TCTTGTTGTGTTGGAGATGTAGG 58.359 43.478 0.00 0.00 0.00 3.18
144 155 5.934043 TGATCTTGTTGTGTTGGAGATGTAG 59.066 40.000 0.00 0.00 0.00 2.74
145 156 5.863965 TGATCTTGTTGTGTTGGAGATGTA 58.136 37.500 0.00 0.00 0.00 2.29
146 157 4.717877 TGATCTTGTTGTGTTGGAGATGT 58.282 39.130 0.00 0.00 0.00 3.06
147 158 5.240183 AGTTGATCTTGTTGTGTTGGAGATG 59.760 40.000 0.00 0.00 0.00 2.90
148 159 5.240183 CAGTTGATCTTGTTGTGTTGGAGAT 59.760 40.000 0.00 0.00 0.00 2.75
149 160 4.576053 CAGTTGATCTTGTTGTGTTGGAGA 59.424 41.667 0.00 0.00 0.00 3.71
150 161 4.261322 CCAGTTGATCTTGTTGTGTTGGAG 60.261 45.833 0.00 0.00 0.00 3.86
151 162 3.631686 CCAGTTGATCTTGTTGTGTTGGA 59.368 43.478 0.00 0.00 0.00 3.53
152 163 3.631686 TCCAGTTGATCTTGTTGTGTTGG 59.368 43.478 0.00 0.00 0.00 3.77
153 164 4.898829 TCCAGTTGATCTTGTTGTGTTG 57.101 40.909 0.00 0.00 0.00 3.33
154 165 4.949856 ACTTCCAGTTGATCTTGTTGTGTT 59.050 37.500 0.00 0.00 0.00 3.32
155 166 4.336433 CACTTCCAGTTGATCTTGTTGTGT 59.664 41.667 0.00 0.00 0.00 3.72
156 167 4.790766 GCACTTCCAGTTGATCTTGTTGTG 60.791 45.833 0.00 0.00 0.00 3.33
157 168 3.316308 GCACTTCCAGTTGATCTTGTTGT 59.684 43.478 0.00 0.00 0.00 3.32
158 169 3.304928 GGCACTTCCAGTTGATCTTGTTG 60.305 47.826 0.00 0.00 34.01 3.33
159 170 2.887152 GGCACTTCCAGTTGATCTTGTT 59.113 45.455 0.00 0.00 34.01 2.83
160 171 2.158623 TGGCACTTCCAGTTGATCTTGT 60.159 45.455 0.00 0.00 40.72 3.16
161 172 2.507484 TGGCACTTCCAGTTGATCTTG 58.493 47.619 0.00 0.00 40.72 3.02
162 173 2.957402 TGGCACTTCCAGTTGATCTT 57.043 45.000 0.00 0.00 40.72 2.40
171 182 2.092103 AGTTGGTAACTTGGCACTTCCA 60.092 45.455 0.00 0.00 44.85 3.53
172 183 2.583143 AGTTGGTAACTTGGCACTTCC 58.417 47.619 0.00 0.00 39.04 3.46
173 184 4.092968 CGATAGTTGGTAACTTGGCACTTC 59.907 45.833 0.00 0.00 42.81 3.01
174 185 4.000988 CGATAGTTGGTAACTTGGCACTT 58.999 43.478 0.00 0.00 42.81 3.16
175 186 3.596214 CGATAGTTGGTAACTTGGCACT 58.404 45.455 0.00 0.00 42.81 4.40
176 187 2.095372 GCGATAGTTGGTAACTTGGCAC 59.905 50.000 0.00 0.00 42.81 5.01
177 188 2.289756 TGCGATAGTTGGTAACTTGGCA 60.290 45.455 0.00 5.07 42.81 4.92
178 189 2.351726 CTGCGATAGTTGGTAACTTGGC 59.648 50.000 0.00 2.78 42.81 4.52
179 190 2.936498 CCTGCGATAGTTGGTAACTTGG 59.064 50.000 0.00 0.00 42.81 3.61
180 191 2.936498 CCCTGCGATAGTTGGTAACTTG 59.064 50.000 0.00 0.00 42.81 3.16
181 192 2.835764 TCCCTGCGATAGTTGGTAACTT 59.164 45.455 0.00 0.00 42.81 2.66
182 193 2.463752 TCCCTGCGATAGTTGGTAACT 58.536 47.619 0.00 0.00 45.40 2.24
183 194 2.973694 TCCCTGCGATAGTTGGTAAC 57.026 50.000 0.00 0.00 39.35 2.50
184 195 4.836175 TGATATCCCTGCGATAGTTGGTAA 59.164 41.667 0.00 0.00 36.88 2.85
185 196 4.412843 TGATATCCCTGCGATAGTTGGTA 58.587 43.478 0.00 0.00 36.88 3.25
186 197 3.239449 TGATATCCCTGCGATAGTTGGT 58.761 45.455 0.00 0.00 36.88 3.67
187 198 3.961480 TGATATCCCTGCGATAGTTGG 57.039 47.619 0.00 0.00 36.88 3.77
188 199 3.997021 GGTTGATATCCCTGCGATAGTTG 59.003 47.826 0.00 0.00 36.88 3.16
189 200 3.646162 TGGTTGATATCCCTGCGATAGTT 59.354 43.478 0.00 0.00 36.88 2.24
190 201 3.239449 TGGTTGATATCCCTGCGATAGT 58.761 45.455 0.00 0.00 36.88 2.12
191 202 3.961480 TGGTTGATATCCCTGCGATAG 57.039 47.619 0.00 0.00 36.88 2.08
192 203 4.285775 TGATTGGTTGATATCCCTGCGATA 59.714 41.667 0.00 0.00 37.85 2.92
193 204 3.072915 TGATTGGTTGATATCCCTGCGAT 59.927 43.478 0.00 0.00 34.73 4.58
194 205 2.437651 TGATTGGTTGATATCCCTGCGA 59.562 45.455 0.00 0.00 0.00 5.10
195 206 2.849942 TGATTGGTTGATATCCCTGCG 58.150 47.619 0.00 0.00 0.00 5.18
196 207 4.021719 CCATTGATTGGTTGATATCCCTGC 60.022 45.833 0.00 0.00 40.99 4.85
197 208 5.717078 CCATTGATTGGTTGATATCCCTG 57.283 43.478 0.00 0.00 40.99 4.45
233 245 3.565764 TTGATCTGGCTTATGTGGGAG 57.434 47.619 0.00 0.00 0.00 4.30
244 256 4.759183 GGTTCCAATAGAGATTGATCTGGC 59.241 45.833 0.00 0.00 44.59 4.85
250 262 4.030913 ACCTCGGTTCCAATAGAGATTGA 58.969 43.478 0.00 0.00 44.59 2.57
259 271 2.879103 ATGTTGACCTCGGTTCCAAT 57.121 45.000 0.00 0.00 0.00 3.16
261 273 1.276989 GGTATGTTGACCTCGGTTCCA 59.723 52.381 0.00 0.00 36.47 3.53
262 274 1.738030 CGGTATGTTGACCTCGGTTCC 60.738 57.143 0.00 0.00 37.34 3.62
266 278 1.520787 GCCGGTATGTTGACCTCGG 60.521 63.158 1.90 0.00 37.34 4.63
271 283 2.512974 CCCCGCCGGTATGTTGAC 60.513 66.667 1.90 0.00 0.00 3.18
326 340 9.743057 TTTCAAAATACAAACTCGATGAACAAT 57.257 25.926 0.00 0.00 0.00 2.71
331 345 9.611284 CAAGATTTCAAAATACAAACTCGATGA 57.389 29.630 0.00 0.00 0.00 2.92
341 355 8.687242 TGTGGTTGTACAAGATTTCAAAATACA 58.313 29.630 8.98 0.00 0.00 2.29
376 393 0.807667 CCGATGTGCTACTGTCTGCC 60.808 60.000 3.81 0.00 0.00 4.85
378 395 1.745653 TCTCCGATGTGCTACTGTCTG 59.254 52.381 0.00 0.00 0.00 3.51
379 396 2.020720 CTCTCCGATGTGCTACTGTCT 58.979 52.381 0.00 0.00 0.00 3.41
380 397 1.746220 ACTCTCCGATGTGCTACTGTC 59.254 52.381 0.00 0.00 0.00 3.51
381 398 1.474478 CACTCTCCGATGTGCTACTGT 59.526 52.381 0.00 0.00 0.00 3.55
382 399 2.200792 CACTCTCCGATGTGCTACTG 57.799 55.000 0.00 0.00 0.00 2.74
388 405 1.812922 GCTGGCACTCTCCGATGTG 60.813 63.158 0.00 0.00 37.26 3.21
396 413 4.154347 GGCTAGCGCTGGCACTCT 62.154 66.667 40.50 7.47 43.41 3.24
502 525 2.844839 GGAGGATGACGGGGAGGG 60.845 72.222 0.00 0.00 0.00 4.30
525 548 4.927782 TGGCAGCGCGTTTGGACT 62.928 61.111 8.43 0.00 0.00 3.85
526 549 4.389576 CTGGCAGCGCGTTTGGAC 62.390 66.667 8.43 0.00 0.00 4.02
563 597 2.778717 GGGAGGGGGATGGGGAAG 60.779 72.222 0.00 0.00 0.00 3.46
565 599 3.791076 GAGGGAGGGGGATGGGGA 61.791 72.222 0.00 0.00 0.00 4.81
592 626 2.727392 TACTGATTCGTGGGGCGGG 61.727 63.158 0.00 0.00 41.72 6.13
593 627 1.520787 GTACTGATTCGTGGGGCGG 60.521 63.158 0.00 0.00 41.72 6.13
594 628 1.520787 GGTACTGATTCGTGGGGCG 60.521 63.158 0.00 0.00 43.01 6.13
595 629 1.153229 GGGTACTGATTCGTGGGGC 60.153 63.158 0.00 0.00 0.00 5.80
596 630 1.525442 GGGGTACTGATTCGTGGGG 59.475 63.158 0.00 0.00 0.00 4.96
597 631 0.981277 AGGGGGTACTGATTCGTGGG 60.981 60.000 0.00 0.00 0.00 4.61
598 632 0.464452 GAGGGGGTACTGATTCGTGG 59.536 60.000 0.00 0.00 0.00 4.94
599 633 0.464452 GGAGGGGGTACTGATTCGTG 59.536 60.000 0.00 0.00 0.00 4.35
600 634 0.690077 GGGAGGGGGTACTGATTCGT 60.690 60.000 0.00 0.00 0.00 3.85
601 635 2.134092 GGGAGGGGGTACTGATTCG 58.866 63.158 0.00 0.00 0.00 3.34
1011 1045 4.632458 GATCGGAGGAGGCGCGAC 62.632 72.222 12.10 7.34 0.00 5.19
1015 1049 2.840102 AAGGGATCGGAGGAGGCG 60.840 66.667 0.00 0.00 0.00 5.52
1016 1050 2.512355 GGAAGGGATCGGAGGAGGC 61.512 68.421 0.00 0.00 0.00 4.70
1017 1051 1.839296 GGGAAGGGATCGGAGGAGG 60.839 68.421 0.00 0.00 0.00 4.30
1018 1052 0.830023 GAGGGAAGGGATCGGAGGAG 60.830 65.000 0.00 0.00 0.00 3.69
1019 1053 1.233369 GAGGGAAGGGATCGGAGGA 59.767 63.158 0.00 0.00 0.00 3.71
1020 1054 1.839296 GGAGGGAAGGGATCGGAGG 60.839 68.421 0.00 0.00 0.00 4.30
1021 1055 1.839296 GGGAGGGAAGGGATCGGAG 60.839 68.421 0.00 0.00 0.00 4.63
1022 1056 2.285868 GGGAGGGAAGGGATCGGA 59.714 66.667 0.00 0.00 0.00 4.55
1100 1145 0.592754 GAGGCGAGCGCTAAGTACTG 60.593 60.000 11.50 0.00 41.60 2.74
1102 1147 1.654743 CGAGGCGAGCGCTAAGTAC 60.655 63.158 11.50 5.53 41.60 2.73
1121 1166 4.473520 AAGACCATGCCTCCCGCG 62.474 66.667 0.00 0.00 42.08 6.46
1123 1168 1.144936 GAGAAGACCATGCCTCCCG 59.855 63.158 0.00 0.00 0.00 5.14
1126 1171 1.522580 GCGGAGAAGACCATGCCTC 60.523 63.158 0.00 0.00 0.00 4.70
1127 1172 1.965754 GAGCGGAGAAGACCATGCCT 61.966 60.000 0.00 0.00 0.00 4.75
1130 1175 1.144936 GGGAGCGGAGAAGACCATG 59.855 63.158 0.00 0.00 0.00 3.66
1131 1176 1.002274 AGGGAGCGGAGAAGACCAT 59.998 57.895 0.00 0.00 0.00 3.55
1132 1177 1.984570 CAGGGAGCGGAGAAGACCA 60.985 63.158 0.00 0.00 0.00 4.02
1133 1178 2.896443 CAGGGAGCGGAGAAGACC 59.104 66.667 0.00 0.00 0.00 3.85
1134 1179 2.185608 GCAGGGAGCGGAGAAGAC 59.814 66.667 0.00 0.00 0.00 3.01
1143 1188 0.678048 AATCCGAAACAGCAGGGAGC 60.678 55.000 0.00 0.00 46.19 4.70
1144 1189 1.089920 CAATCCGAAACAGCAGGGAG 58.910 55.000 0.00 0.00 30.92 4.30
1145 1190 0.322456 CCAATCCGAAACAGCAGGGA 60.322 55.000 0.00 0.00 0.00 4.20
1146 1191 1.315257 CCCAATCCGAAACAGCAGGG 61.315 60.000 0.00 0.00 0.00 4.45
1147 1192 1.937546 GCCCAATCCGAAACAGCAGG 61.938 60.000 0.00 0.00 0.00 4.85
1148 1193 1.508088 GCCCAATCCGAAACAGCAG 59.492 57.895 0.00 0.00 0.00 4.24
1149 1194 2.331893 CGCCCAATCCGAAACAGCA 61.332 57.895 0.00 0.00 0.00 4.41
1150 1195 2.485122 CGCCCAATCCGAAACAGC 59.515 61.111 0.00 0.00 0.00 4.40
1151 1196 2.485122 GCGCCCAATCCGAAACAG 59.515 61.111 0.00 0.00 0.00 3.16
1152 1197 3.427425 CGCGCCCAATCCGAAACA 61.427 61.111 0.00 0.00 0.00 2.83
1153 1198 4.829518 GCGCGCCCAATCCGAAAC 62.830 66.667 23.24 0.00 0.00 2.78
1158 1203 4.829518 GAAACGCGCGCCCAATCC 62.830 66.667 32.58 8.46 0.00 3.01
1166 1211 4.499023 CCATGGTCGAAACGCGCG 62.499 66.667 30.96 30.96 40.61 6.86
1167 1212 4.160635 CCCATGGTCGAAACGCGC 62.161 66.667 11.73 0.00 40.61 6.86
1168 1213 3.496131 CCCCATGGTCGAAACGCG 61.496 66.667 11.73 3.53 42.69 6.01
1169 1214 2.359478 ACCCCATGGTCGAAACGC 60.359 61.111 11.73 0.00 43.06 4.84
1170 1215 2.686816 GCACCCCATGGTCGAAACG 61.687 63.158 11.73 0.00 45.57 3.60
1171 1216 0.893727 AAGCACCCCATGGTCGAAAC 60.894 55.000 11.73 0.00 45.57 2.78
1172 1217 0.693622 TAAGCACCCCATGGTCGAAA 59.306 50.000 11.73 0.00 45.57 3.46
1478 1523 1.757699 GGAGAAGGGATTAGCAGACGT 59.242 52.381 0.00 0.00 0.00 4.34
1524 1624 1.594517 CACGACATGTCATTGCAACG 58.405 50.000 24.93 11.73 0.00 4.10
1584 1685 3.056749 ACCAGTCAATCTCTACACGGAAC 60.057 47.826 0.00 0.00 0.00 3.62
1630 1731 3.674528 ATAGCAGCACTACATAGCAGG 57.325 47.619 0.00 0.00 32.32 4.85
1647 1748 1.089920 AGCCAGAGTTTGCGCAATAG 58.910 50.000 25.64 11.72 0.00 1.73
1665 1766 8.954950 ACTAAACAATTCCAGATCAGTATCAG 57.045 34.615 0.00 0.00 34.28 2.90
1723 1826 6.421377 TCAATATATGCGGTATGTCATTGC 57.579 37.500 0.00 0.00 0.00 3.56
1803 1929 2.925966 ATTTCCCAGGGCAATTCAGA 57.074 45.000 0.00 0.00 0.00 3.27
1899 2026 4.160439 CAGTATCTACCAGAGTTCAGGCAA 59.840 45.833 0.00 0.00 0.00 4.52
1905 2032 4.339814 CCAGACCAGTATCTACCAGAGTTC 59.660 50.000 0.00 0.00 0.00 3.01
1948 2075 1.603455 CCATCCCCAACACAAGCGT 60.603 57.895 0.00 0.00 0.00 5.07
1983 2112 3.157932 AGCATCTAGAAGTTCGCAGTC 57.842 47.619 0.00 0.00 0.00 3.51
1988 2117 5.406780 ACTGAAACAAGCATCTAGAAGTTCG 59.593 40.000 0.00 0.00 0.00 3.95
2004 2133 4.085733 CCATTCCCATTGGTACTGAAACA 58.914 43.478 1.20 0.00 0.00 2.83
2015 2144 1.488390 CCCAGGTTCCATTCCCATTG 58.512 55.000 0.00 0.00 0.00 2.82
2017 2146 0.554865 TCCCCAGGTTCCATTCCCAT 60.555 55.000 0.00 0.00 0.00 4.00
2042 2172 5.491070 ACAGAAATAGCACAAGCACTCATA 58.509 37.500 0.00 0.00 45.49 2.15
2088 2220 4.064388 GGTAACGTGGTAAGCCTTTTGTA 58.936 43.478 0.00 0.00 35.27 2.41
2132 2764 4.220602 GGCATTGGTGTAGAATTTTCCAGT 59.779 41.667 0.00 0.00 0.00 4.00
2154 2786 4.209538 TCACTTAATCTGCATGGATTGGG 58.790 43.478 10.59 6.39 36.69 4.12
2165 2797 9.853555 CCATAGACTAGCTAATCACTTAATCTG 57.146 37.037 4.82 0.00 31.66 2.90
2167 2799 8.808092 ACCCATAGACTAGCTAATCACTTAATC 58.192 37.037 4.82 0.00 31.66 1.75
2173 2805 6.583562 ACAAACCCATAGACTAGCTAATCAC 58.416 40.000 4.82 0.00 31.66 3.06
2174 2806 6.808321 ACAAACCCATAGACTAGCTAATCA 57.192 37.500 4.82 0.00 31.66 2.57
2231 3208 7.877097 GCAATTTCAGATCAGTATCTCTACCAT 59.123 37.037 0.00 0.00 40.65 3.55
2277 3254 1.476488 GGACCATTACATGCCCAACAC 59.524 52.381 0.00 0.00 0.00 3.32
2345 3328 3.119531 CCCAAGTTTCATTCGCATTGCTA 60.120 43.478 7.12 0.00 0.00 3.49
2363 3346 0.844661 AGTACTGCACCCATCCCCAA 60.845 55.000 0.00 0.00 0.00 4.12
2374 3357 2.097304 CACAAACAGCACAAGTACTGCA 59.903 45.455 8.15 0.00 37.42 4.41
2380 3363 1.949525 CTAGCCACAAACAGCACAAGT 59.050 47.619 0.00 0.00 0.00 3.16
2470 3454 9.232473 TGTTTAATACAACAGGCATAACACATA 57.768 29.630 0.00 0.00 32.70 2.29
2573 3557 1.349026 ACAAGTCCCACATCTCCACAG 59.651 52.381 0.00 0.00 0.00 3.66
2802 4011 2.945668 GCAGGCTACAAATAAGGTCAGG 59.054 50.000 0.00 0.00 0.00 3.86
2847 4134 6.256539 ACAGTCATATCAAAGCGAAGTGTATG 59.743 38.462 0.00 0.00 0.00 2.39
2849 4136 5.720202 ACAGTCATATCAAAGCGAAGTGTA 58.280 37.500 0.00 0.00 0.00 2.90
2853 4140 6.754209 AGTTAGACAGTCATATCAAAGCGAAG 59.246 38.462 2.66 0.00 0.00 3.79
2855 4142 6.208988 AGTTAGACAGTCATATCAAAGCGA 57.791 37.500 2.66 0.00 0.00 4.93
2856 4143 6.311445 ACAAGTTAGACAGTCATATCAAAGCG 59.689 38.462 2.66 0.00 0.00 4.68
3094 4484 3.442977 GGGCAGGATTATCATTGCTGATC 59.557 47.826 16.45 0.00 41.29 2.92
3238 4628 3.374058 CCTCGATGCTAAATGAAAACGGT 59.626 43.478 0.00 0.00 0.00 4.83
3310 4700 1.215423 AGCACCTTTGGTTCCTTCACT 59.785 47.619 0.00 0.00 31.02 3.41
3374 4764 6.045955 ACTTTGAGAAGTCACTCAGAAGAAC 58.954 40.000 17.82 0.00 42.35 3.01
3701 5093 3.648067 ACAAAAGACAGGTGGATCAGAGA 59.352 43.478 0.00 0.00 0.00 3.10
3725 5117 8.960591 AGAAAAGGATAATGTGTGACCATTAAG 58.039 33.333 9.46 0.00 39.88 1.85
3727 5119 8.106462 TCAGAAAAGGATAATGTGTGACCATTA 58.894 33.333 8.30 8.30 40.52 1.90
4900 6323 3.626028 AAGTGAAAACGGCTGAATCAC 57.374 42.857 16.82 16.82 40.45 3.06
5027 6451 9.771140 ACCTCTAAGGAAAAGAGAAGTTATAGA 57.229 33.333 0.00 0.00 42.63 1.98
5028 6452 9.810545 CACCTCTAAGGAAAAGAGAAGTTATAG 57.189 37.037 0.00 0.00 42.63 1.31
5232 6657 0.317269 CTGAAAACTGCAGTGCACGG 60.317 55.000 22.49 13.06 33.79 4.94
5262 6687 7.046652 CAGACATGATGAAGTTAAGGTGAGAT 58.953 38.462 0.00 0.00 0.00 2.75
5370 6795 5.277825 TCAAACGTAGGAACTGCAATTTTG 58.722 37.500 0.00 0.00 42.67 2.44
5373 6798 3.058224 GCTCAAACGTAGGAACTGCAATT 60.058 43.478 0.00 0.00 42.67 2.32
5388 6813 0.033920 CCCCTTGCTTTGGCTCAAAC 59.966 55.000 0.00 0.00 39.59 2.93
5391 6816 0.480690 TAACCCCTTGCTTTGGCTCA 59.519 50.000 0.00 0.00 39.59 4.26
5513 6938 1.965414 TTGGAATCCTGGAGGTAGCA 58.035 50.000 1.52 0.00 36.34 3.49
5560 6985 6.108015 GCTGATGCAAAGATTTGGGAATAAA 58.892 36.000 7.38 0.00 38.57 1.40
5590 7019 8.145122 ACTTGTGAACAAAACTTTTGAACCTAA 58.855 29.630 19.07 8.68 35.15 2.69
5597 7026 5.844301 AGCACTTGTGAACAAAACTTTTG 57.156 34.783 11.95 11.95 35.15 2.44
5602 7031 5.458779 GGATGTAAGCACTTGTGAACAAAAC 59.541 40.000 4.79 2.95 35.15 2.43
5604 7033 4.642437 TGGATGTAAGCACTTGTGAACAAA 59.358 37.500 4.79 0.00 35.15 2.83
5615 7044 3.119849 GGTTGTGATGTGGATGTAAGCAC 60.120 47.826 0.00 0.00 0.00 4.40
5622 7061 2.751259 CAGAAGGGTTGTGATGTGGATG 59.249 50.000 0.00 0.00 0.00 3.51
5631 7071 4.310769 CTGAAGAGTACAGAAGGGTTGTG 58.689 47.826 0.00 0.00 37.54 3.33
5739 7180 1.340017 GGGATGCTGTAGTTCCTTGCA 60.340 52.381 0.00 0.00 38.05 4.08
5766 7207 0.538287 ACTTGGCCTTCAGCTTGTCC 60.538 55.000 3.32 0.00 43.05 4.02
5808 7249 1.293179 GGTTGAGGTTGCAATGGCC 59.707 57.895 0.59 0.00 40.13 5.36
5814 7255 2.115052 ATGGCGGTTGAGGTTGCA 59.885 55.556 0.00 0.00 0.00 4.08
5925 7366 1.144936 GGCCATCGAGAAGAGTGGG 59.855 63.158 0.00 0.00 32.05 4.61
5928 7369 4.338815 TCGGCCATCGAGAAGAGT 57.661 55.556 2.24 0.00 43.74 3.24
6252 7693 2.180159 AAACCGACACGAGGGGGATG 62.180 60.000 0.00 0.00 0.00 3.51
6285 7726 2.032620 GGCTTCTTATCTCGAGACCCA 58.967 52.381 19.30 2.92 0.00 4.51
6287 7728 3.712187 CAAGGCTTCTTATCTCGAGACC 58.288 50.000 19.30 12.54 0.00 3.85
6288 7729 3.120041 GCAAGGCTTCTTATCTCGAGAC 58.880 50.000 19.30 2.53 0.00 3.36
6289 7730 2.101582 GGCAAGGCTTCTTATCTCGAGA 59.898 50.000 19.19 19.19 0.00 4.04
6290 7731 2.478831 GGCAAGGCTTCTTATCTCGAG 58.521 52.381 5.93 5.93 0.00 4.04
6291 7732 1.202417 CGGCAAGGCTTCTTATCTCGA 60.202 52.381 0.00 0.00 0.00 4.04
6292 7733 1.212616 CGGCAAGGCTTCTTATCTCG 58.787 55.000 0.00 0.00 0.00 4.04
6320 7764 1.767289 TTCGCGAGACAACAGAGTTC 58.233 50.000 9.59 0.00 41.84 3.01
6331 7775 0.737367 CATCAGTGGCTTTCGCGAGA 60.737 55.000 9.59 3.35 36.88 4.04
6350 7794 2.856336 GCGGCGGCTAAACTACTACTAC 60.856 54.545 9.78 0.00 35.83 2.73
6351 7795 1.334869 GCGGCGGCTAAACTACTACTA 59.665 52.381 9.78 0.00 35.83 1.82
6352 7796 0.101939 GCGGCGGCTAAACTACTACT 59.898 55.000 9.78 0.00 35.83 2.57
6353 7797 2.586418 GCGGCGGCTAAACTACTAC 58.414 57.895 9.78 0.00 35.83 2.73
6448 7895 2.423577 ACTATTTGACTGCGACCAACC 58.576 47.619 0.00 0.00 0.00 3.77
6489 7942 0.389426 ACCGTAACCGATGTGTCTGC 60.389 55.000 0.00 0.00 35.63 4.26
6538 7991 2.799562 GCGCATAAAGGGAAAAGATGGC 60.800 50.000 0.30 0.00 0.00 4.40
6548 8001 0.592247 GACAATGCGCGCATAAAGGG 60.592 55.000 43.22 29.95 35.31 3.95
6556 8009 0.179192 TGAAAGATGACAATGCGCGC 60.179 50.000 27.26 27.26 0.00 6.86
6557 8010 2.031314 AGATGAAAGATGACAATGCGCG 59.969 45.455 0.00 0.00 0.00 6.86
6584 8039 4.433186 ACGTCACAGATTCAGAGAGAAG 57.567 45.455 0.00 0.00 40.15 2.85
6585 8040 4.855715 AACGTCACAGATTCAGAGAGAA 57.144 40.909 0.00 0.00 41.28 2.87
6590 8045 3.813166 GGGAAAAACGTCACAGATTCAGA 59.187 43.478 0.00 0.00 0.00 3.27
6596 8064 0.841289 AGGGGGAAAAACGTCACAGA 59.159 50.000 0.00 0.00 0.00 3.41
6608 8076 4.557705 CCTGACTAAGAATCTAGGGGGAA 58.442 47.826 0.00 0.00 0.00 3.97
6612 8080 4.219115 TGAGCCTGACTAAGAATCTAGGG 58.781 47.826 0.00 0.00 0.00 3.53
6613 8081 5.860941 TTGAGCCTGACTAAGAATCTAGG 57.139 43.478 0.00 0.00 0.00 3.02
6615 8132 6.097554 CCTCTTTGAGCCTGACTAAGAATCTA 59.902 42.308 0.00 0.00 31.48 1.98
6621 8138 3.259374 TCACCTCTTTGAGCCTGACTAAG 59.741 47.826 0.00 0.00 0.00 2.18
6628 8145 1.439543 AACCTCACCTCTTTGAGCCT 58.560 50.000 0.00 0.00 41.61 4.58
6647 8164 5.268387 TGGCTTAGGAATAGAAATGCCAAA 58.732 37.500 0.00 0.00 44.86 3.28
6648 8165 4.865905 TGGCTTAGGAATAGAAATGCCAA 58.134 39.130 0.00 0.00 44.86 4.52
6663 8180 1.222936 CCTGGAGTGCCTGGCTTAG 59.777 63.158 21.03 10.16 44.97 2.18
6664 8181 3.403624 CCTGGAGTGCCTGGCTTA 58.596 61.111 21.03 0.00 44.97 3.09
6669 8186 0.543277 TATTCTGCCTGGAGTGCCTG 59.457 55.000 0.00 0.00 34.31 4.85
6670 8187 0.835941 CTATTCTGCCTGGAGTGCCT 59.164 55.000 0.00 0.00 34.31 4.75
6671 8188 0.179034 CCTATTCTGCCTGGAGTGCC 60.179 60.000 0.00 0.00 0.00 5.01
6672 8189 0.179034 CCCTATTCTGCCTGGAGTGC 60.179 60.000 0.00 0.00 0.00 4.40
6673 8190 1.134280 CACCCTATTCTGCCTGGAGTG 60.134 57.143 0.00 0.00 0.00 3.51
6674 8191 1.207791 CACCCTATTCTGCCTGGAGT 58.792 55.000 0.00 0.00 0.00 3.85
6675 8192 0.179034 GCACCCTATTCTGCCTGGAG 60.179 60.000 0.00 0.00 0.00 3.86
6676 8193 1.915228 GCACCCTATTCTGCCTGGA 59.085 57.895 0.00 0.00 0.00 3.86
6677 8194 4.567318 GCACCCTATTCTGCCTGG 57.433 61.111 0.00 0.00 0.00 4.45
6681 8198 0.603975 GATCCGGCACCCTATTCTGC 60.604 60.000 0.00 0.00 0.00 4.26
6682 8199 1.051812 AGATCCGGCACCCTATTCTG 58.948 55.000 0.00 0.00 0.00 3.02
6683 8200 1.051812 CAGATCCGGCACCCTATTCT 58.948 55.000 0.00 0.00 0.00 2.40
6684 8201 0.035458 CCAGATCCGGCACCCTATTC 59.965 60.000 0.00 0.00 0.00 1.75
6685 8202 0.399949 TCCAGATCCGGCACCCTATT 60.400 55.000 0.00 0.00 0.00 1.73
6686 8203 0.833834 CTCCAGATCCGGCACCCTAT 60.834 60.000 0.00 0.00 0.00 2.57
6687 8204 1.457643 CTCCAGATCCGGCACCCTA 60.458 63.158 0.00 0.00 0.00 3.53
6688 8205 2.765807 CTCCAGATCCGGCACCCT 60.766 66.667 0.00 0.00 0.00 4.34
6689 8206 4.554036 GCTCCAGATCCGGCACCC 62.554 72.222 0.00 0.00 0.00 4.61
6690 8207 4.899239 CGCTCCAGATCCGGCACC 62.899 72.222 0.00 0.00 0.00 5.01
6694 8211 2.859273 AAACTGCGCTCCAGATCCGG 62.859 60.000 9.73 0.00 44.64 5.14
6695 8212 0.179111 TAAACTGCGCTCCAGATCCG 60.179 55.000 9.73 0.00 44.64 4.18
6696 8213 1.576356 CTAAACTGCGCTCCAGATCC 58.424 55.000 9.73 0.00 44.64 3.36
6697 8214 0.933796 GCTAAACTGCGCTCCAGATC 59.066 55.000 9.73 0.00 44.64 2.75
6716 8233 5.116180 TCAGGTGACGCATTATTTTAGGAG 58.884 41.667 0.00 0.00 0.00 3.69
6718 8235 7.672983 ATATCAGGTGACGCATTATTTTAGG 57.327 36.000 0.00 0.00 0.00 2.69
6726 8243 9.897744 CAAAAATATAATATCAGGTGACGCATT 57.102 29.630 0.00 0.00 0.00 3.56
6728 8245 8.445275 ACAAAAATATAATATCAGGTGACGCA 57.555 30.769 0.00 0.00 0.00 5.24
6729 8246 9.169468 CAACAAAAATATAATATCAGGTGACGC 57.831 33.333 0.00 0.00 0.00 5.19
6766 8494 2.475685 CGACACGATCTTTGAGCTACGA 60.476 50.000 0.00 0.00 0.00 3.43
6767 8495 1.840741 CGACACGATCTTTGAGCTACG 59.159 52.381 0.00 0.00 0.00 3.51
6822 8554 0.299300 CTAGAGAGTCTGACGACGCG 59.701 60.000 3.53 3.53 43.62 6.01
6883 8618 2.285977 GTTATCCGTGACCCATTCCAC 58.714 52.381 0.00 0.00 0.00 4.02
6936 8671 1.836166 TCCTTGGCTCTCCTCATCAAG 59.164 52.381 0.00 0.00 35.80 3.02
7026 8944 2.554032 GTGACCAGCAGCAACAGTATTT 59.446 45.455 0.00 0.00 0.00 1.40
7042 8963 0.946221 CAGAGCAGTTGACCGTGACC 60.946 60.000 0.00 0.00 0.00 4.02
7070 8991 0.616371 TTTACATGGACGGGAGGTGG 59.384 55.000 0.00 0.00 0.00 4.61
7111 9186 5.899120 TTGTTTACTTGTGGTGCAACTTA 57.101 34.783 2.04 0.00 36.74 2.24
7112 9187 4.792521 TTGTTTACTTGTGGTGCAACTT 57.207 36.364 2.04 0.00 36.74 2.66
7113 9188 4.202111 GGATTGTTTACTTGTGGTGCAACT 60.202 41.667 2.04 0.00 36.74 3.16
7114 9189 4.048504 GGATTGTTTACTTGTGGTGCAAC 58.951 43.478 0.00 0.00 32.90 4.17
7115 9190 3.243234 CGGATTGTTTACTTGTGGTGCAA 60.243 43.478 0.00 0.00 35.50 4.08
7116 9191 2.292016 CGGATTGTTTACTTGTGGTGCA 59.708 45.455 0.00 0.00 0.00 4.57
7117 9192 2.292292 ACGGATTGTTTACTTGTGGTGC 59.708 45.455 0.00 0.00 0.00 5.01
7118 9193 3.363575 CGACGGATTGTTTACTTGTGGTG 60.364 47.826 0.00 0.00 0.00 4.17
7119 9194 2.803956 CGACGGATTGTTTACTTGTGGT 59.196 45.455 0.00 0.00 0.00 4.16
7120 9195 2.803956 ACGACGGATTGTTTACTTGTGG 59.196 45.455 0.00 0.00 0.00 4.17
7121 9196 3.794536 CACGACGGATTGTTTACTTGTG 58.205 45.455 0.00 0.00 0.00 3.33
7122 9197 2.222445 GCACGACGGATTGTTTACTTGT 59.778 45.455 0.00 0.00 0.00 3.16
7123 9198 2.478894 AGCACGACGGATTGTTTACTTG 59.521 45.455 0.00 0.00 0.00 3.16
7124 9199 2.762745 AGCACGACGGATTGTTTACTT 58.237 42.857 0.00 0.00 0.00 2.24
7125 9200 2.450609 AGCACGACGGATTGTTTACT 57.549 45.000 0.00 0.00 0.00 2.24
7126 9201 2.412325 CCAAGCACGACGGATTGTTTAC 60.412 50.000 0.00 0.00 0.00 2.01
7127 9202 1.801771 CCAAGCACGACGGATTGTTTA 59.198 47.619 0.00 0.00 0.00 2.01
7128 9203 0.591170 CCAAGCACGACGGATTGTTT 59.409 50.000 0.00 0.00 0.00 2.83
7134 9209 2.649034 GAGACCAAGCACGACGGA 59.351 61.111 0.00 0.00 0.00 4.69
7219 9309 2.990066 ACGAAGGGAATGGATGAGAC 57.010 50.000 0.00 0.00 0.00 3.36
7229 9319 6.373216 CCTTATATTTGTGTGAACGAAGGGAA 59.627 38.462 0.00 0.00 0.00 3.97
7230 9320 5.878116 CCTTATATTTGTGTGAACGAAGGGA 59.122 40.000 0.00 0.00 0.00 4.20
7244 9334 8.240682 TCGAAACATCCAAACACCTTATATTTG 58.759 33.333 0.00 0.00 33.90 2.32
7246 9336 7.931578 TCGAAACATCCAAACACCTTATATT 57.068 32.000 0.00 0.00 0.00 1.28
7250 9340 9.104965 CTTATATCGAAACATCCAAACACCTTA 57.895 33.333 0.00 0.00 0.00 2.69
7251 9341 7.610305 ACTTATATCGAAACATCCAAACACCTT 59.390 33.333 0.00 0.00 0.00 3.50
7253 9343 7.148306 ACACTTATATCGAAACATCCAAACACC 60.148 37.037 0.00 0.00 0.00 4.16
7256 9346 9.095065 ACTACACTTATATCGAAACATCCAAAC 57.905 33.333 0.00 0.00 0.00 2.93
7264 9354 9.322776 CCGTATGTACTACACTTATATCGAAAC 57.677 37.037 0.00 0.00 0.00 2.78
7268 9358 8.167345 CACTCCGTATGTACTACACTTATATCG 58.833 40.741 0.00 0.00 0.00 2.92
7269 9359 9.212641 TCACTCCGTATGTACTACACTTATATC 57.787 37.037 0.00 0.00 0.00 1.63
7276 9366 5.747197 CCATTTCACTCCGTATGTACTACAC 59.253 44.000 0.00 0.00 0.00 2.90
7280 9370 3.773119 ACCCATTTCACTCCGTATGTACT 59.227 43.478 0.00 0.00 0.00 2.73
7284 9374 3.260475 TCACCCATTTCACTCCGTATG 57.740 47.619 0.00 0.00 0.00 2.39
7292 9382 6.084326 AGTATGTTTGTTCACCCATTTCAC 57.916 37.500 0.00 0.00 0.00 3.18
7299 9389 5.910723 CACGTTTTAGTATGTTTGTTCACCC 59.089 40.000 0.00 0.00 0.00 4.61
7300 9390 6.488817 ACACGTTTTAGTATGTTTGTTCACC 58.511 36.000 0.00 0.00 0.00 4.02
7302 9392 7.542534 AGACACGTTTTAGTATGTTTGTTCA 57.457 32.000 0.00 0.00 0.00 3.18
7303 9393 8.006027 GGTAGACACGTTTTAGTATGTTTGTTC 58.994 37.037 0.00 0.00 0.00 3.18
7307 9397 7.332678 GGATGGTAGACACGTTTTAGTATGTTT 59.667 37.037 0.00 0.00 0.00 2.83
7312 9402 4.142403 CCGGATGGTAGACACGTTTTAGTA 60.142 45.833 0.00 0.00 0.00 1.82
7333 9423 1.803334 TCCATCTTTTCCGTGAACCG 58.197 50.000 0.00 0.00 0.00 4.44
7334 9424 2.882137 TGTTCCATCTTTTCCGTGAACC 59.118 45.455 0.00 0.00 0.00 3.62
7335 9425 4.455877 AGATGTTCCATCTTTTCCGTGAAC 59.544 41.667 0.92 0.00 0.00 3.18
7337 9427 4.286297 AGATGTTCCATCTTTTCCGTGA 57.714 40.909 0.92 0.00 0.00 4.35
7338 9428 6.683974 ATAAGATGTTCCATCTTTTCCGTG 57.316 37.500 20.85 0.00 39.01 4.94
7339 9429 8.980481 AATATAAGATGTTCCATCTTTTCCGT 57.020 30.769 20.85 8.40 39.01 4.69
7340 9430 9.056005 TGAATATAAGATGTTCCATCTTTTCCG 57.944 33.333 20.85 0.00 39.01 4.30
7350 9444 7.118390 CCTCCGTTCATGAATATAAGATGTTCC 59.882 40.741 12.12 0.00 30.34 3.62
7360 9454 5.394738 TCTACTCCCTCCGTTCATGAATAT 58.605 41.667 12.12 0.00 0.00 1.28
7365 9459 2.959030 TCATCTACTCCCTCCGTTCATG 59.041 50.000 0.00 0.00 0.00 3.07
7375 9469 4.651503 TGAAGGTGATTCTCATCTACTCCC 59.348 45.833 0.00 0.00 36.70 4.30
7397 9491 7.598189 TCATTGCATAAAATCAAATGGTGTG 57.402 32.000 0.00 0.00 0.00 3.82
7403 9497 7.906010 CGCACAAATCATTGCATAAAATCAAAT 59.094 29.630 0.00 0.00 40.34 2.32
7412 9506 4.652421 ATTCCGCACAAATCATTGCATA 57.348 36.364 0.00 0.00 40.34 3.14
7419 9513 4.942852 AGAAACAAATTCCGCACAAATCA 58.057 34.783 0.00 0.00 38.94 2.57
7424 9518 4.582701 ATGAAGAAACAAATTCCGCACA 57.417 36.364 0.00 0.00 38.94 4.57
7425 9519 5.691754 AGAAATGAAGAAACAAATTCCGCAC 59.308 36.000 0.00 0.00 38.94 5.34
7427 9521 6.769608 AAGAAATGAAGAAACAAATTCCGC 57.230 33.333 0.00 0.00 38.94 5.54
7428 9522 7.437862 TGGAAAGAAATGAAGAAACAAATTCCG 59.562 33.333 0.00 0.00 38.94 4.30
7434 9528 9.835389 ATCAATTGGAAAGAAATGAAGAAACAA 57.165 25.926 5.42 0.00 0.00 2.83
7436 9530 8.642020 CGATCAATTGGAAAGAAATGAAGAAAC 58.358 33.333 5.42 0.00 0.00 2.78
7439 9533 7.686438 TCGATCAATTGGAAAGAAATGAAGA 57.314 32.000 5.42 0.00 0.00 2.87
7440 9534 8.186163 TGATCGATCAATTGGAAAGAAATGAAG 58.814 33.333 25.44 0.00 33.08 3.02
7442 9536 7.628769 TGATCGATCAATTGGAAAGAAATGA 57.371 32.000 25.44 0.00 33.08 2.57
7444 9538 9.309516 CATTTGATCGATCAATTGGAAAGAAAT 57.690 29.630 34.58 22.90 45.30 2.17
7448 9542 7.096189 GCATCATTTGATCGATCAATTGGAAAG 60.096 37.037 37.58 29.51 45.30 2.62
7455 9550 4.277423 TGCTGCATCATTTGATCGATCAAT 59.723 37.500 34.66 23.34 45.30 2.57
7462 9557 5.746307 TCTAACTGCTGCATCATTTGATC 57.254 39.130 1.31 0.00 31.21 2.92
7472 9567 0.907486 AGCCTCATCTAACTGCTGCA 59.093 50.000 0.88 0.88 0.00 4.41
7482 9577 4.777896 TGTAGGACTAACAAAGCCTCATCT 59.222 41.667 0.00 0.00 34.68 2.90
7489 9584 5.888105 TCTCGTATGTAGGACTAACAAAGC 58.112 41.667 0.00 0.00 0.00 3.51
7490 9585 8.928270 AATTCTCGTATGTAGGACTAACAAAG 57.072 34.615 0.00 0.00 0.00 2.77
7492 9587 8.133627 GCTAATTCTCGTATGTAGGACTAACAA 58.866 37.037 0.00 0.00 0.00 2.83
7506 9601 6.537301 ACAATTCGGATTTGCTAATTCTCGTA 59.463 34.615 11.43 0.00 0.00 3.43
7517 9612 4.091800 CCATGTTTGACAATTCGGATTTGC 59.908 41.667 11.43 6.40 0.00 3.68
7531 9626 4.952957 TGGAGAGTTTTTGTCCATGTTTGA 59.047 37.500 0.00 0.00 43.86 2.69
7539 9634 1.200020 CGCCATGGAGAGTTTTTGTCC 59.800 52.381 18.40 0.00 39.69 4.02
7540 9635 1.401539 GCGCCATGGAGAGTTTTTGTC 60.402 52.381 20.86 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.