Multiple sequence alignment - TraesCS2A01G087200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G087200 chr2A 100.000 5679 0 0 1 5679 40598734 40593056 0.000000e+00 10488.0
1 TraesCS2A01G087200 chr2A 100.000 768 0 0 1 768 40604605 40603838 0.000000e+00 1419.0
2 TraesCS2A01G087200 chr2D 95.523 4222 129 8 261 4458 36671355 36667170 0.000000e+00 6695.0
3 TraesCS2A01G087200 chr2D 92.252 555 34 2 4917 5462 36666759 36666205 0.000000e+00 778.0
4 TraesCS2A01G087200 chr2D 93.017 401 21 4 4451 4849 36667146 36666751 3.810000e-161 579.0
5 TraesCS2A01G087200 chr2D 97.619 210 4 1 5471 5679 365591197 365591406 5.410000e-95 359.0
6 TraesCS2A01G087200 chr2D 97.619 210 4 1 5471 5679 470113689 470113898 5.410000e-95 359.0
7 TraesCS2A01G087200 chr2D 91.176 204 14 4 1 203 36671699 36671499 2.020000e-69 274.0
8 TraesCS2A01G087200 chr2D 100.000 36 0 0 223 258 36671421 36671386 3.670000e-07 67.6
9 TraesCS2A01G087200 chrUn 100.000 768 0 0 1 768 392685234 392684467 0.000000e+00 1419.0
10 TraesCS2A01G087200 chr4D 98.095 210 3 1 5471 5679 349931349 349931140 1.160000e-96 364.0
11 TraesCS2A01G087200 chr4D 97.156 211 5 1 5470 5679 87280922 87280712 7.000000e-94 355.0
12 TraesCS2A01G087200 chr7D 97.619 210 4 1 5471 5679 153328250 153328041 5.410000e-95 359.0
13 TraesCS2A01G087200 chr6D 97.619 210 4 1 5471 5679 386746089 386746298 5.410000e-95 359.0
14 TraesCS2A01G087200 chr3D 97.619 210 4 1 5471 5679 36247954 36247745 5.410000e-95 359.0
15 TraesCS2A01G087200 chr3D 97.619 210 4 1 5471 5679 261063722 261063513 5.410000e-95 359.0
16 TraesCS2A01G087200 chr3D 97.619 210 4 1 5471 5679 522960480 522960271 5.410000e-95 359.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G087200 chr2A 40593056 40598734 5678 True 10488.00 10488 100.0000 1 5679 1 chr2A.!!$R1 5678
1 TraesCS2A01G087200 chr2A 40603838 40604605 767 True 1419.00 1419 100.0000 1 768 1 chr2A.!!$R2 767
2 TraesCS2A01G087200 chr2D 36666205 36671699 5494 True 1678.72 6695 94.3936 1 5462 5 chr2D.!!$R1 5461
3 TraesCS2A01G087200 chrUn 392684467 392685234 767 True 1419.00 1419 100.0000 1 768 1 chrUn.!!$R1 767

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
988 1099 0.251634 GAGACAAGGAGAAGGGGCAG 59.748 60.0 0.00 0.0 0.00 4.85 F
1426 1537 0.107017 AGATATGGCTGCCACCACAC 60.107 55.0 25.99 13.5 44.17 3.82 F
1584 1695 0.471591 AAATGTTTGGAGCCTGCCCA 60.472 50.0 0.00 0.0 0.00 5.36 F
2619 2730 0.321298 GCCTTCGTCAACTTGGCCTA 60.321 55.0 3.32 0.0 37.81 3.93 F
2977 3088 0.401738 ATACATGGGATTGGGGCTCG 59.598 55.0 0.00 0.0 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2256 2367 0.453950 CAGACAATTGCAGCAGACGC 60.454 55.0 5.05 0.0 38.99 5.19 R
2259 2370 0.594602 GCACAGACAATTGCAGCAGA 59.405 50.0 5.05 0.0 38.68 4.26 R
3074 3185 3.231818 TCAAGGCTAGGAGGTATAGTGC 58.768 50.0 0.00 0.0 0.00 4.40 R
3798 3909 0.036952 AGGACTCCATTGCACAGTCG 60.037 55.0 0.00 0.0 37.95 4.18 R
4806 4949 0.036164 TTCTGGGTGTTGCGTGCTAT 59.964 50.0 0.00 0.0 0.00 2.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
957 1068 4.592192 CTGGATCGCGGCGGATGT 62.592 66.667 23.46 6.37 0.00 3.06
986 1097 1.219393 CGAGACAAGGAGAAGGGGC 59.781 63.158 0.00 0.00 0.00 5.80
987 1098 1.544825 CGAGACAAGGAGAAGGGGCA 61.545 60.000 0.00 0.00 0.00 5.36
988 1099 0.251634 GAGACAAGGAGAAGGGGCAG 59.748 60.000 0.00 0.00 0.00 4.85
989 1100 1.377856 GACAAGGAGAAGGGGCAGC 60.378 63.158 0.00 0.00 0.00 5.25
990 1101 2.044551 CAAGGAGAAGGGGCAGCC 60.045 66.667 1.26 1.26 0.00 4.85
991 1102 3.721706 AAGGAGAAGGGGCAGCCG 61.722 66.667 5.00 0.00 0.00 5.52
1054 1165 2.548480 GCTGAAACTAACCCAGTGTCAC 59.452 50.000 0.00 0.00 45.04 3.67
1055 1166 3.744530 GCTGAAACTAACCCAGTGTCACT 60.745 47.826 0.00 0.00 45.04 3.41
1066 1177 4.588528 ACCCAGTGTCACTTTTTGCAATAT 59.411 37.500 1.67 0.00 0.00 1.28
1072 1183 4.252878 GTCACTTTTTGCAATATTGGGGG 58.747 43.478 17.02 0.00 0.00 5.40
1098 1209 1.188863 GCATGGGGAAATCAGCACTT 58.811 50.000 0.00 0.00 0.00 3.16
1179 1290 4.576463 GTGAAGGTGTCATTTGAGTTCAGT 59.424 41.667 0.00 0.00 38.90 3.41
1315 1426 1.186200 TGATGTCTGGGAAGACGAGG 58.814 55.000 0.00 0.00 41.43 4.63
1347 1458 1.032114 GGGAAGATTTGCTGTCCCCG 61.032 60.000 0.00 0.00 43.53 5.73
1395 1506 6.414732 CAAAATCCTGTTGACCACTAGGATA 58.585 40.000 12.06 0.00 46.52 2.59
1426 1537 0.107017 AGATATGGCTGCCACCACAC 60.107 55.000 25.99 13.50 44.17 3.82
1470 1581 5.429762 TCTGAAACTGGATGGATTACAGGAT 59.570 40.000 0.00 0.00 36.57 3.24
1483 1594 5.179555 GGATTACAGGATAGCGACAATTTCC 59.820 44.000 0.00 0.00 0.00 3.13
1509 1620 4.589908 TCTTCAAAAGCCTACTGAATCCC 58.410 43.478 0.00 0.00 0.00 3.85
1521 1632 2.093447 ACTGAATCCCGATGTGAACTCC 60.093 50.000 0.00 0.00 0.00 3.85
1522 1633 1.209504 TGAATCCCGATGTGAACTCCC 59.790 52.381 0.00 0.00 0.00 4.30
1557 1668 2.886523 CCTTCTGCTGATTGGTGAACAA 59.113 45.455 0.00 0.00 44.54 2.83
1563 1674 5.945191 TCTGCTGATTGGTGAACAAATATCA 59.055 36.000 0.00 0.00 43.46 2.15
1568 1679 8.938906 GCTGATTGGTGAACAAATATCAAAAAT 58.061 29.630 0.00 0.00 43.46 1.82
1584 1695 0.471591 AAATGTTTGGAGCCTGCCCA 60.472 50.000 0.00 0.00 0.00 5.36
1590 1701 2.123982 GGAGCCTGCCCATTCCTG 60.124 66.667 0.00 0.00 0.00 3.86
1596 1707 1.108776 CCTGCCCATTCCTGACATTG 58.891 55.000 0.00 0.00 0.00 2.82
1615 1726 4.072088 CGGTCGTTTCGCACCTGC 62.072 66.667 0.00 0.00 37.78 4.85
1641 1752 6.350194 GGGATGATTTGAAAACTAGTTGGACC 60.350 42.308 9.34 0.00 0.00 4.46
1730 1841 1.749063 CTACGACCATCTACCTGCACA 59.251 52.381 0.00 0.00 0.00 4.57
1765 1876 9.522804 TTTGCTTTAGGTATTGTAGTTTGTTTG 57.477 29.630 0.00 0.00 0.00 2.93
1795 1906 5.529060 GGGCACAAATTTTACATGGACAAAA 59.471 36.000 0.00 1.19 0.00 2.44
1834 1945 6.371825 GGTCAGTTCTGGACTAATACCTTTTG 59.628 42.308 7.04 0.00 36.65 2.44
1863 1974 1.762957 GAGCCTGGTGATAGCTTACCA 59.237 52.381 14.19 14.19 44.31 3.25
1927 2038 2.386661 AGAGTACTTCACGGCATTGG 57.613 50.000 0.00 0.00 0.00 3.16
1954 2065 6.332630 AGAAAATCATTCTTTTGCCGTATGG 58.667 36.000 0.00 0.00 38.77 2.74
1956 2067 6.767524 AAATCATTCTTTTGCCGTATGGTA 57.232 33.333 2.17 0.00 37.67 3.25
1974 2085 3.009033 TGGTAGAAACAGATCCTTGTGGG 59.991 47.826 0.00 0.00 0.00 4.61
1976 2087 1.177401 GAAACAGATCCTTGTGGGGC 58.823 55.000 0.00 0.00 35.33 5.80
2028 2139 1.211969 GCTGCATGACTTGGCACAG 59.788 57.895 0.00 0.00 42.39 3.66
2244 2355 3.197265 GCTTGGAGAGATTCTGAAGAGC 58.803 50.000 0.00 0.00 0.00 4.09
2358 2469 4.950475 TCCTTAATCTCATGTGACGAGTCT 59.050 41.667 0.00 0.00 0.00 3.24
2398 2509 9.905713 TCTTTAAATTCTACCATCTGCAAGTAT 57.094 29.630 0.00 0.00 33.76 2.12
2445 2556 2.826128 AGAACCAGACTTGAGCGACATA 59.174 45.455 0.00 0.00 0.00 2.29
2619 2730 0.321298 GCCTTCGTCAACTTGGCCTA 60.321 55.000 3.32 0.00 37.81 3.93
2640 2751 6.976925 GCCTAATGAATCTTCAAAATGTCCAG 59.023 38.462 0.00 0.00 41.13 3.86
2734 2845 7.117812 GGAACAGATACAATAATGATACACGGG 59.882 40.741 0.00 0.00 0.00 5.28
2736 2847 6.929049 ACAGATACAATAATGATACACGGGTG 59.071 38.462 0.00 0.00 0.00 4.61
2751 2862 4.103153 ACACGGGTGGATGATCAGATTATT 59.897 41.667 0.09 0.00 34.19 1.40
2754 2865 4.505566 CGGGTGGATGATCAGATTATTGGT 60.506 45.833 0.09 0.00 0.00 3.67
2759 2870 7.884877 GGTGGATGATCAGATTATTGGTAATCA 59.115 37.037 0.09 0.00 45.64 2.57
2929 3040 6.823689 TCAGGAACTAAATTTACTCCAGCATC 59.176 38.462 17.90 4.51 36.02 3.91
2972 3083 5.940617 TCAGTTAGAATACATGGGATTGGG 58.059 41.667 0.00 0.00 0.00 4.12
2977 3088 0.401738 ATACATGGGATTGGGGCTCG 59.598 55.000 0.00 0.00 0.00 5.03
2982 3093 2.375345 GGGATTGGGGCTCGAGGAA 61.375 63.158 15.58 0.00 0.00 3.36
3001 3112 6.986817 CGAGGAACTAACTGATACCAATGAAT 59.013 38.462 0.00 0.00 41.55 2.57
3066 3177 1.682087 GGATGGTGCCCTAACCTGAAC 60.682 57.143 0.00 0.00 41.16 3.18
3074 3185 3.195661 GCCCTAACCTGAACATACTTCG 58.804 50.000 0.00 0.00 0.00 3.79
3093 3204 2.158505 TCGCACTATACCTCCTAGCCTT 60.159 50.000 0.00 0.00 0.00 4.35
3120 3231 7.346471 AGGTACTGATATTAAAGCATGTTGGT 58.654 34.615 0.00 0.00 37.18 3.67
3124 3235 8.986477 ACTGATATTAAAGCATGTTGGTTTTC 57.014 30.769 9.62 3.19 44.59 2.29
3231 3342 7.201866 GCACATCTGACTTCTCTAGATAAAGGA 60.202 40.741 15.64 7.16 30.43 3.36
4005 4116 3.373439 CCTCACTTAGCAAGCTGACAATC 59.627 47.826 4.53 0.00 0.00 2.67
4033 4144 4.380867 GCTGTGACCCAATGTTTATGAAGG 60.381 45.833 0.00 0.00 0.00 3.46
4034 4145 4.085733 TGTGACCCAATGTTTATGAAGGG 58.914 43.478 0.00 0.00 42.07 3.95
4107 4218 7.497249 GCTCATGTGGATATAATGTCCTATTCC 59.503 40.741 0.00 0.00 36.68 3.01
4133 4244 3.364465 GGTGCGCTTTCTTTCTCTTCTTC 60.364 47.826 9.73 0.00 0.00 2.87
4134 4245 2.808543 TGCGCTTTCTTTCTCTTCTTCC 59.191 45.455 9.73 0.00 0.00 3.46
4135 4246 3.070748 GCGCTTTCTTTCTCTTCTTCCT 58.929 45.455 0.00 0.00 0.00 3.36
4228 4339 4.751600 TGACATGGAAAGCATGATATCGTC 59.248 41.667 0.00 0.00 34.39 4.20
4230 4341 5.371526 ACATGGAAAGCATGATATCGTCTT 58.628 37.500 0.00 0.00 34.39 3.01
4247 4358 4.756642 TCGTCTTTGATGTTCATGCTTCTT 59.243 37.500 0.00 0.00 0.00 2.52
4303 4414 4.799564 TCACCAAAAGCTTGTTCTTGTT 57.200 36.364 0.00 0.00 0.00 2.83
4306 4417 6.329496 TCACCAAAAGCTTGTTCTTGTTTAG 58.671 36.000 0.00 0.00 0.00 1.85
4309 4420 5.005682 CCAAAAGCTTGTTCTTGTTTAGTGC 59.994 40.000 0.00 0.00 0.00 4.40
4375 4486 2.761208 CCTCACTCCTTACTGTGGTAGG 59.239 54.545 0.00 0.00 35.15 3.18
4391 4502 6.406370 TGTGGTAGGTTTATCAGAGATGTTG 58.594 40.000 0.00 0.00 0.00 3.33
4469 4612 4.320608 TCTTGTGCAAATTTTCTCCCAC 57.679 40.909 0.00 0.00 0.00 4.61
4490 4633 6.488006 CCCACTTTTATGATAGAGACCATTGG 59.512 42.308 0.00 0.00 0.00 3.16
4491 4634 6.016777 CCACTTTTATGATAGAGACCATTGGC 60.017 42.308 1.54 0.00 0.00 4.52
4507 4650 4.754618 CCATTGGCCTGTTAAAGTTTTTCC 59.245 41.667 3.32 0.00 0.00 3.13
4528 4671 3.119352 CCTGGCAGCATTTAGGTTTCTTC 60.119 47.826 9.56 0.00 0.00 2.87
4610 4753 1.801332 GCAGGAATGAGCTGCAGTG 59.199 57.895 16.64 3.86 42.98 3.66
4642 4785 7.225145 CAGATTCAAGGTTTTGAGAAAAATGCA 59.775 33.333 0.00 0.00 43.76 3.96
4659 4802 3.415457 TGCATATAATCCACGCCATCA 57.585 42.857 0.00 0.00 0.00 3.07
4766 4909 5.874810 GCACCAGTGATGAAATTACAGTCTA 59.125 40.000 0.99 0.00 34.88 2.59
4789 4932 3.466836 GCCTCGTGTGAATATGATCCAA 58.533 45.455 0.00 0.00 0.00 3.53
4798 4941 6.916387 GTGTGAATATGATCCAAATCTTGCTG 59.084 38.462 0.00 0.00 32.75 4.41
4803 4946 2.097825 GATCCAAATCTTGCTGCCAGT 58.902 47.619 0.00 0.00 0.00 4.00
4805 4948 3.370840 TCCAAATCTTGCTGCCAGTAT 57.629 42.857 0.00 0.00 0.00 2.12
4806 4949 4.502105 TCCAAATCTTGCTGCCAGTATA 57.498 40.909 0.00 0.00 0.00 1.47
4807 4950 5.052693 TCCAAATCTTGCTGCCAGTATAT 57.947 39.130 0.00 0.00 0.00 0.86
4808 4951 6.186420 TCCAAATCTTGCTGCCAGTATATA 57.814 37.500 0.00 0.00 0.00 0.86
4809 4952 6.233434 TCCAAATCTTGCTGCCAGTATATAG 58.767 40.000 0.00 0.00 0.00 1.31
4810 4953 5.106396 CCAAATCTTGCTGCCAGTATATAGC 60.106 44.000 0.00 0.00 36.72 2.97
4811 4954 4.897509 ATCTTGCTGCCAGTATATAGCA 57.102 40.909 0.00 0.00 43.73 3.49
4812 4955 3.995199 TCTTGCTGCCAGTATATAGCAC 58.005 45.455 0.00 0.00 44.94 4.40
4813 4956 2.438868 TGCTGCCAGTATATAGCACG 57.561 50.000 0.00 0.00 40.88 5.34
4814 4957 1.071605 GCTGCCAGTATATAGCACGC 58.928 55.000 0.00 0.00 36.24 5.34
4822 4965 2.432874 AGTATATAGCACGCAACACCCA 59.567 45.455 0.00 0.00 0.00 4.51
4824 4967 0.899019 TATAGCACGCAACACCCAGA 59.101 50.000 0.00 0.00 0.00 3.86
4825 4968 0.036164 ATAGCACGCAACACCCAGAA 59.964 50.000 0.00 0.00 0.00 3.02
4846 4989 3.613494 TGCAGCAATGCAATGGTATTT 57.387 38.095 8.35 0.00 42.40 1.40
4847 4990 3.263261 TGCAGCAATGCAATGGTATTTG 58.737 40.909 8.35 0.00 42.40 2.32
4848 4991 3.264104 GCAGCAATGCAATGGTATTTGT 58.736 40.909 8.35 0.00 34.41 2.83
4849 4992 3.307782 GCAGCAATGCAATGGTATTTGTC 59.692 43.478 8.35 0.00 34.41 3.18
4850 4993 4.751060 CAGCAATGCAATGGTATTTGTCT 58.249 39.130 8.35 0.00 0.00 3.41
4851 4994 4.565166 CAGCAATGCAATGGTATTTGTCTG 59.435 41.667 8.35 5.34 0.00 3.51
4852 4995 4.221262 AGCAATGCAATGGTATTTGTCTGT 59.779 37.500 8.35 0.00 0.00 3.41
4853 4996 5.418524 AGCAATGCAATGGTATTTGTCTGTA 59.581 36.000 8.35 0.00 0.00 2.74
4854 4997 6.097270 AGCAATGCAATGGTATTTGTCTGTAT 59.903 34.615 8.35 0.00 0.00 2.29
4855 4998 6.757947 GCAATGCAATGGTATTTGTCTGTATT 59.242 34.615 3.49 0.00 0.00 1.89
4856 4999 7.043192 GCAATGCAATGGTATTTGTCTGTATTC 60.043 37.037 3.49 0.00 0.00 1.75
4857 5000 7.643569 ATGCAATGGTATTTGTCTGTATTCA 57.356 32.000 0.00 0.00 0.00 2.57
4858 5001 7.459795 TGCAATGGTATTTGTCTGTATTCAA 57.540 32.000 0.00 0.00 0.00 2.69
4859 5002 8.065473 TGCAATGGTATTTGTCTGTATTCAAT 57.935 30.769 0.00 0.00 0.00 2.57
4860 5003 7.975058 TGCAATGGTATTTGTCTGTATTCAATG 59.025 33.333 0.00 0.00 0.00 2.82
4861 5004 7.975616 GCAATGGTATTTGTCTGTATTCAATGT 59.024 33.333 0.00 0.00 0.00 2.71
4862 5005 9.859427 CAATGGTATTTGTCTGTATTCAATGTT 57.141 29.630 0.00 0.00 0.00 2.71
4864 5007 8.628630 TGGTATTTGTCTGTATTCAATGTTCA 57.371 30.769 0.00 0.00 0.00 3.18
4865 5008 9.241919 TGGTATTTGTCTGTATTCAATGTTCAT 57.758 29.630 0.00 0.00 0.00 2.57
4866 5009 9.507280 GGTATTTGTCTGTATTCAATGTTCATG 57.493 33.333 0.00 0.00 0.00 3.07
4867 5010 9.507280 GTATTTGTCTGTATTCAATGTTCATGG 57.493 33.333 0.00 0.00 0.00 3.66
4868 5011 7.757941 TTTGTCTGTATTCAATGTTCATGGA 57.242 32.000 0.00 0.00 0.00 3.41
4869 5012 6.990341 TGTCTGTATTCAATGTTCATGGAG 57.010 37.500 0.00 0.00 0.00 3.86
4870 5013 5.355071 TGTCTGTATTCAATGTTCATGGAGC 59.645 40.000 0.00 0.00 0.00 4.70
4871 5014 4.571984 TCTGTATTCAATGTTCATGGAGCG 59.428 41.667 0.00 0.00 0.00 5.03
4872 5015 4.260985 TGTATTCAATGTTCATGGAGCGT 58.739 39.130 0.00 0.00 0.00 5.07
4873 5016 3.770263 ATTCAATGTTCATGGAGCGTG 57.230 42.857 0.00 0.00 0.00 5.34
4874 5017 1.452110 TCAATGTTCATGGAGCGTGG 58.548 50.000 0.00 0.00 0.00 4.94
4875 5018 0.452987 CAATGTTCATGGAGCGTGGG 59.547 55.000 0.00 0.00 0.00 4.61
4876 5019 0.680921 AATGTTCATGGAGCGTGGGG 60.681 55.000 0.00 0.00 0.00 4.96
4877 5020 2.438434 GTTCATGGAGCGTGGGGG 60.438 66.667 0.00 0.00 0.00 5.40
4878 5021 2.933287 TTCATGGAGCGTGGGGGT 60.933 61.111 0.00 0.00 0.00 4.95
4879 5022 3.266686 TTCATGGAGCGTGGGGGTG 62.267 63.158 0.00 0.00 0.00 4.61
4880 5023 3.716195 CATGGAGCGTGGGGGTGA 61.716 66.667 0.00 0.00 0.00 4.02
4881 5024 2.692368 ATGGAGCGTGGGGGTGAT 60.692 61.111 0.00 0.00 0.00 3.06
4882 5025 2.746375 ATGGAGCGTGGGGGTGATC 61.746 63.158 0.00 0.00 0.00 2.92
4883 5026 3.083997 GGAGCGTGGGGGTGATCT 61.084 66.667 0.00 0.00 0.00 2.75
4884 5027 2.187946 GAGCGTGGGGGTGATCTG 59.812 66.667 0.00 0.00 0.00 2.90
4885 5028 2.284625 AGCGTGGGGGTGATCTGA 60.285 61.111 0.00 0.00 0.00 3.27
4886 5029 1.899437 GAGCGTGGGGGTGATCTGAA 61.899 60.000 0.00 0.00 0.00 3.02
4887 5030 1.745489 GCGTGGGGGTGATCTGAAC 60.745 63.158 0.00 0.00 0.00 3.18
4888 5031 1.983224 CGTGGGGGTGATCTGAACT 59.017 57.895 0.00 0.00 0.00 3.01
4889 5032 0.324943 CGTGGGGGTGATCTGAACTT 59.675 55.000 0.00 0.00 0.00 2.66
4890 5033 1.271379 CGTGGGGGTGATCTGAACTTT 60.271 52.381 0.00 0.00 0.00 2.66
4891 5034 2.814097 CGTGGGGGTGATCTGAACTTTT 60.814 50.000 0.00 0.00 0.00 2.27
4892 5035 2.558359 GTGGGGGTGATCTGAACTTTTG 59.442 50.000 0.00 0.00 0.00 2.44
4893 5036 2.445145 TGGGGGTGATCTGAACTTTTGA 59.555 45.455 0.00 0.00 0.00 2.69
4894 5037 3.084786 GGGGGTGATCTGAACTTTTGAG 58.915 50.000 0.00 0.00 0.00 3.02
4895 5038 3.084786 GGGGTGATCTGAACTTTTGAGG 58.915 50.000 0.00 0.00 0.00 3.86
4896 5039 3.498661 GGGGTGATCTGAACTTTTGAGGT 60.499 47.826 0.00 0.00 0.00 3.85
4897 5040 4.145052 GGGTGATCTGAACTTTTGAGGTT 58.855 43.478 0.00 0.00 0.00 3.50
4898 5041 4.022849 GGGTGATCTGAACTTTTGAGGTTG 60.023 45.833 0.00 0.00 0.00 3.77
4899 5042 4.022849 GGTGATCTGAACTTTTGAGGTTGG 60.023 45.833 0.00 0.00 0.00 3.77
4900 5043 4.580580 GTGATCTGAACTTTTGAGGTTGGT 59.419 41.667 0.00 0.00 0.00 3.67
4901 5044 5.763204 GTGATCTGAACTTTTGAGGTTGGTA 59.237 40.000 0.00 0.00 0.00 3.25
4902 5045 6.431234 GTGATCTGAACTTTTGAGGTTGGTAT 59.569 38.462 0.00 0.00 0.00 2.73
4903 5046 7.606456 GTGATCTGAACTTTTGAGGTTGGTATA 59.394 37.037 0.00 0.00 0.00 1.47
4904 5047 8.328758 TGATCTGAACTTTTGAGGTTGGTATAT 58.671 33.333 0.00 0.00 0.00 0.86
4905 5048 9.178758 GATCTGAACTTTTGAGGTTGGTATATT 57.821 33.333 0.00 0.00 0.00 1.28
4906 5049 8.934023 TCTGAACTTTTGAGGTTGGTATATTT 57.066 30.769 0.00 0.00 0.00 1.40
4907 5050 8.792633 TCTGAACTTTTGAGGTTGGTATATTTG 58.207 33.333 0.00 0.00 0.00 2.32
4908 5051 8.472007 TGAACTTTTGAGGTTGGTATATTTGT 57.528 30.769 0.00 0.00 0.00 2.83
4909 5052 8.573035 TGAACTTTTGAGGTTGGTATATTTGTC 58.427 33.333 0.00 0.00 0.00 3.18
4910 5053 8.706322 AACTTTTGAGGTTGGTATATTTGTCT 57.294 30.769 0.00 0.00 0.00 3.41
4911 5054 8.336801 ACTTTTGAGGTTGGTATATTTGTCTC 57.663 34.615 0.00 0.00 0.00 3.36
4912 5055 7.393515 ACTTTTGAGGTTGGTATATTTGTCTCC 59.606 37.037 0.00 0.00 0.00 3.71
4913 5056 6.636454 TTGAGGTTGGTATATTTGTCTCCT 57.364 37.500 0.00 0.00 0.00 3.69
4914 5057 5.989477 TGAGGTTGGTATATTTGTCTCCTG 58.011 41.667 0.00 0.00 0.00 3.86
4915 5058 5.104527 TGAGGTTGGTATATTTGTCTCCTGG 60.105 44.000 0.00 0.00 0.00 4.45
4916 5059 4.166144 AGGTTGGTATATTTGTCTCCTGGG 59.834 45.833 0.00 0.00 0.00 4.45
4917 5060 4.461198 GTTGGTATATTTGTCTCCTGGGG 58.539 47.826 0.00 0.00 0.00 4.96
4918 5061 3.743132 TGGTATATTTGTCTCCTGGGGT 58.257 45.455 0.00 0.00 0.00 4.95
4919 5062 3.458118 TGGTATATTTGTCTCCTGGGGTG 59.542 47.826 0.00 0.00 0.00 4.61
5016 5159 1.207488 TCCAAGGGGGTCACAGATGG 61.207 60.000 0.00 0.00 38.11 3.51
5041 5192 7.229308 GGCATATGGTCATATGGTGATATCAT 58.771 38.462 24.07 0.00 46.62 2.45
5051 5202 4.645863 TGGTGATATCATTGCCAGCTAT 57.354 40.909 9.02 0.00 0.00 2.97
5056 5207 6.538021 GGTGATATCATTGCCAGCTATAGAAG 59.462 42.308 9.02 0.00 0.00 2.85
5078 5229 4.593634 AGCTTACTTACTGTCTGGAACCTT 59.406 41.667 0.00 0.00 0.00 3.50
5128 5279 5.402630 AGGGTATGAAATGAACCACCTTTT 58.597 37.500 0.00 0.00 34.83 2.27
5144 5295 5.410067 CACCTTTTGAAACTCTCTTGCAAA 58.590 37.500 0.00 0.00 0.00 3.68
5150 5301 5.833406 TGAAACTCTCTTGCAAATGTTCA 57.167 34.783 0.00 2.44 0.00 3.18
5163 5314 5.163530 TGCAAATGTTCAGTCAGTTGATTGT 60.164 36.000 10.26 0.00 43.19 2.71
5175 5326 1.068434 GTTGATTGTGGTTGTGGGGTG 59.932 52.381 0.00 0.00 0.00 4.61
5217 5368 6.530120 TGATTGTAACTCTTGGCACTTCTTA 58.470 36.000 0.00 0.00 0.00 2.10
5221 5372 4.439253 AACTCTTGGCACTTCTTAAGGT 57.561 40.909 1.85 0.00 0.00 3.50
5230 5381 6.535540 TGGCACTTCTTAAGGTGTACATAAA 58.464 36.000 0.00 0.00 36.03 1.40
5261 5412 3.567164 ACCAGAAAAGCTGTTGATGTCTG 59.433 43.478 0.00 0.00 43.33 3.51
5302 5453 6.367422 GGTGTCTGATCTCTGTACTCTTTTTG 59.633 42.308 0.00 0.00 0.00 2.44
5369 5521 8.714179 CATTGTCAAATGCAAATTACAGTTCAT 58.286 29.630 0.00 0.00 36.99 2.57
5418 5570 4.685628 CCGTTGCAAAATAATTGCTGAACT 59.314 37.500 13.59 0.00 45.13 3.01
5441 5593 6.490040 ACTGTAATTTCTGTGTGGCTACATTT 59.510 34.615 6.06 0.00 39.39 2.32
5442 5594 6.908825 TGTAATTTCTGTGTGGCTACATTTC 58.091 36.000 6.06 0.00 39.39 2.17
5462 5614 7.124599 ACATTTCCTATTGAATTCATGCTCCAA 59.875 33.333 9.40 0.00 31.67 3.53
5463 5615 6.455360 TTCCTATTGAATTCATGCTCCAAC 57.545 37.500 9.40 0.00 0.00 3.77
5464 5616 5.759059 TCCTATTGAATTCATGCTCCAACT 58.241 37.500 9.40 0.00 0.00 3.16
5465 5617 5.591472 TCCTATTGAATTCATGCTCCAACTG 59.409 40.000 9.40 0.00 0.00 3.16
5466 5618 5.359009 CCTATTGAATTCATGCTCCAACTGT 59.641 40.000 9.40 0.00 0.00 3.55
5467 5619 6.543465 CCTATTGAATTCATGCTCCAACTGTA 59.457 38.462 9.40 0.00 0.00 2.74
5468 5620 6.839124 ATTGAATTCATGCTCCAACTGTAA 57.161 33.333 9.40 0.00 0.00 2.41
5469 5621 6.839124 TTGAATTCATGCTCCAACTGTAAT 57.161 33.333 9.40 0.00 0.00 1.89
5470 5622 6.839124 TGAATTCATGCTCCAACTGTAATT 57.161 33.333 3.38 0.00 0.00 1.40
5471 5623 6.855836 TGAATTCATGCTCCAACTGTAATTC 58.144 36.000 3.38 0.00 34.33 2.17
5472 5624 6.660521 TGAATTCATGCTCCAACTGTAATTCT 59.339 34.615 3.38 0.00 34.66 2.40
5473 5625 7.828717 TGAATTCATGCTCCAACTGTAATTCTA 59.171 33.333 3.38 0.00 34.66 2.10
5474 5626 8.579850 AATTCATGCTCCAACTGTAATTCTAA 57.420 30.769 0.00 0.00 0.00 2.10
5475 5627 7.615582 TTCATGCTCCAACTGTAATTCTAAG 57.384 36.000 0.00 0.00 0.00 2.18
5476 5628 5.586243 TCATGCTCCAACTGTAATTCTAAGC 59.414 40.000 0.00 0.00 0.00 3.09
5477 5629 5.165961 TGCTCCAACTGTAATTCTAAGCT 57.834 39.130 0.00 0.00 0.00 3.74
5478 5630 5.560724 TGCTCCAACTGTAATTCTAAGCTT 58.439 37.500 3.48 3.48 0.00 3.74
5479 5631 5.412594 TGCTCCAACTGTAATTCTAAGCTTG 59.587 40.000 9.86 0.00 0.00 4.01
5480 5632 5.163713 GCTCCAACTGTAATTCTAAGCTTGG 60.164 44.000 9.86 6.29 0.00 3.61
5481 5633 5.253330 TCCAACTGTAATTCTAAGCTTGGG 58.747 41.667 9.86 1.84 0.00 4.12
5482 5634 4.399303 CCAACTGTAATTCTAAGCTTGGGG 59.601 45.833 9.86 0.00 0.00 4.96
5483 5635 5.253330 CAACTGTAATTCTAAGCTTGGGGA 58.747 41.667 9.86 1.78 0.00 4.81
5484 5636 5.104259 ACTGTAATTCTAAGCTTGGGGAG 57.896 43.478 9.86 0.00 0.00 4.30
5485 5637 4.536489 ACTGTAATTCTAAGCTTGGGGAGT 59.464 41.667 9.86 0.83 0.00 3.85
5486 5638 5.014228 ACTGTAATTCTAAGCTTGGGGAGTT 59.986 40.000 9.86 9.90 0.00 3.01
5487 5639 5.253330 TGTAATTCTAAGCTTGGGGAGTTG 58.747 41.667 9.86 0.00 0.00 3.16
5488 5640 4.657814 AATTCTAAGCTTGGGGAGTTGA 57.342 40.909 9.86 0.00 0.00 3.18
5489 5641 4.870021 ATTCTAAGCTTGGGGAGTTGAT 57.130 40.909 9.86 0.00 0.00 2.57
5490 5642 5.975988 ATTCTAAGCTTGGGGAGTTGATA 57.024 39.130 9.86 0.00 0.00 2.15
5491 5643 4.755266 TCTAAGCTTGGGGAGTTGATAC 57.245 45.455 9.86 0.00 0.00 2.24
5492 5644 2.403252 AAGCTTGGGGAGTTGATACG 57.597 50.000 0.00 0.00 0.00 3.06
5493 5645 1.276622 AGCTTGGGGAGTTGATACGT 58.723 50.000 0.00 0.00 0.00 3.57
5494 5646 1.207329 AGCTTGGGGAGTTGATACGTC 59.793 52.381 0.00 0.00 0.00 4.34
5495 5647 1.742750 GCTTGGGGAGTTGATACGTCC 60.743 57.143 0.00 0.00 0.00 4.79
5496 5648 1.553248 CTTGGGGAGTTGATACGTCCA 59.447 52.381 0.00 0.00 31.31 4.02
5497 5649 1.874129 TGGGGAGTTGATACGTCCAT 58.126 50.000 0.00 0.00 31.31 3.41
5498 5650 2.193127 TGGGGAGTTGATACGTCCATT 58.807 47.619 0.00 0.00 31.31 3.16
5499 5651 2.574369 TGGGGAGTTGATACGTCCATTT 59.426 45.455 0.00 0.00 31.31 2.32
5500 5652 3.009695 TGGGGAGTTGATACGTCCATTTT 59.990 43.478 0.00 0.00 31.31 1.82
5501 5653 3.377172 GGGGAGTTGATACGTCCATTTTG 59.623 47.826 0.00 0.00 31.31 2.44
5502 5654 3.181500 GGGAGTTGATACGTCCATTTTGC 60.181 47.826 0.00 0.00 31.31 3.68
5503 5655 3.438781 GGAGTTGATACGTCCATTTTGCA 59.561 43.478 0.00 0.00 0.00 4.08
5504 5656 4.096382 GGAGTTGATACGTCCATTTTGCAT 59.904 41.667 0.00 0.00 0.00 3.96
5505 5657 5.235305 AGTTGATACGTCCATTTTGCATC 57.765 39.130 0.00 0.00 0.00 3.91
5506 5658 4.699735 AGTTGATACGTCCATTTTGCATCA 59.300 37.500 0.00 0.00 0.00 3.07
5507 5659 5.357878 AGTTGATACGTCCATTTTGCATCAT 59.642 36.000 0.00 0.00 0.00 2.45
5508 5660 5.172460 TGATACGTCCATTTTGCATCATG 57.828 39.130 0.00 0.00 0.00 3.07
5509 5661 4.639755 TGATACGTCCATTTTGCATCATGT 59.360 37.500 0.00 0.00 0.00 3.21
5510 5662 3.940209 ACGTCCATTTTGCATCATGTT 57.060 38.095 0.00 0.00 0.00 2.71
5511 5663 4.255833 ACGTCCATTTTGCATCATGTTT 57.744 36.364 0.00 0.00 0.00 2.83
5512 5664 4.630111 ACGTCCATTTTGCATCATGTTTT 58.370 34.783 0.00 0.00 0.00 2.43
5513 5665 4.685628 ACGTCCATTTTGCATCATGTTTTC 59.314 37.500 0.00 0.00 0.00 2.29
5514 5666 4.925054 CGTCCATTTTGCATCATGTTTTCT 59.075 37.500 0.00 0.00 0.00 2.52
5515 5667 5.406175 CGTCCATTTTGCATCATGTTTTCTT 59.594 36.000 0.00 0.00 0.00 2.52
5516 5668 6.585702 CGTCCATTTTGCATCATGTTTTCTTA 59.414 34.615 0.00 0.00 0.00 2.10
5517 5669 7.410728 CGTCCATTTTGCATCATGTTTTCTTAC 60.411 37.037 0.00 0.00 0.00 2.34
5518 5670 7.599998 GTCCATTTTGCATCATGTTTTCTTACT 59.400 33.333 0.00 0.00 0.00 2.24
5519 5671 7.599621 TCCATTTTGCATCATGTTTTCTTACTG 59.400 33.333 0.00 0.00 0.00 2.74
5520 5672 7.385752 CCATTTTGCATCATGTTTTCTTACTGT 59.614 33.333 0.00 0.00 0.00 3.55
5521 5673 8.767085 CATTTTGCATCATGTTTTCTTACTGTT 58.233 29.630 0.00 0.00 0.00 3.16
5522 5674 9.979578 ATTTTGCATCATGTTTTCTTACTGTTA 57.020 25.926 0.00 0.00 0.00 2.41
5523 5675 9.979578 TTTTGCATCATGTTTTCTTACTGTTAT 57.020 25.926 0.00 0.00 0.00 1.89
5524 5676 9.979578 TTTGCATCATGTTTTCTTACTGTTATT 57.020 25.926 0.00 0.00 0.00 1.40
5525 5677 9.979578 TTGCATCATGTTTTCTTACTGTTATTT 57.020 25.926 0.00 0.00 0.00 1.40
5559 5711 9.820725 TTTTATCCATGATAATGCTTTTTGGAG 57.179 29.630 0.00 0.00 34.95 3.86
5560 5712 8.537728 TTATCCATGATAATGCTTTTTGGAGT 57.462 30.769 0.00 0.00 35.42 3.85
5561 5713 9.639563 TTATCCATGATAATGCTTTTTGGAGTA 57.360 29.630 0.00 0.00 35.42 2.59
5562 5714 7.953005 TCCATGATAATGCTTTTTGGAGTAA 57.047 32.000 0.00 0.00 0.00 2.24
5563 5715 8.537728 TCCATGATAATGCTTTTTGGAGTAAT 57.462 30.769 0.00 0.00 0.00 1.89
5564 5716 8.980596 TCCATGATAATGCTTTTTGGAGTAATT 58.019 29.630 0.00 0.00 0.00 1.40
5565 5717 9.252962 CCATGATAATGCTTTTTGGAGTAATTC 57.747 33.333 0.00 0.00 0.00 2.17
5571 5723 8.707938 AATGCTTTTTGGAGTAATTCTAATGC 57.292 30.769 0.00 0.00 0.00 3.56
5572 5724 6.630071 TGCTTTTTGGAGTAATTCTAATGCC 58.370 36.000 0.00 0.00 0.00 4.40
5573 5725 6.437162 TGCTTTTTGGAGTAATTCTAATGCCT 59.563 34.615 0.00 0.00 0.00 4.75
5574 5726 7.039082 TGCTTTTTGGAGTAATTCTAATGCCTT 60.039 33.333 0.00 0.00 0.00 4.35
5575 5727 7.819415 GCTTTTTGGAGTAATTCTAATGCCTTT 59.181 33.333 0.00 0.00 0.00 3.11
5576 5728 9.710900 CTTTTTGGAGTAATTCTAATGCCTTTT 57.289 29.630 0.00 0.00 0.00 2.27
5577 5729 9.705290 TTTTTGGAGTAATTCTAATGCCTTTTC 57.295 29.630 0.00 0.00 0.00 2.29
5578 5730 8.650143 TTTGGAGTAATTCTAATGCCTTTTCT 57.350 30.769 0.00 0.00 0.00 2.52
5579 5731 7.865706 TGGAGTAATTCTAATGCCTTTTCTC 57.134 36.000 0.00 0.00 0.00 2.87
5580 5732 7.633789 TGGAGTAATTCTAATGCCTTTTCTCT 58.366 34.615 0.00 0.00 0.00 3.10
5581 5733 7.770897 TGGAGTAATTCTAATGCCTTTTCTCTC 59.229 37.037 0.00 0.00 0.00 3.20
5582 5734 7.770897 GGAGTAATTCTAATGCCTTTTCTCTCA 59.229 37.037 0.00 0.00 0.00 3.27
5583 5735 9.336171 GAGTAATTCTAATGCCTTTTCTCTCAT 57.664 33.333 0.00 0.00 0.00 2.90
5590 5742 8.408601 TCTAATGCCTTTTCTCTCATAATTTGC 58.591 33.333 0.00 0.00 0.00 3.68
5591 5743 5.981088 TGCCTTTTCTCTCATAATTTGCA 57.019 34.783 0.00 0.00 0.00 4.08
5592 5744 6.343716 TGCCTTTTCTCTCATAATTTGCAA 57.656 33.333 0.00 0.00 0.00 4.08
5593 5745 6.392354 TGCCTTTTCTCTCATAATTTGCAAG 58.608 36.000 0.00 0.00 0.00 4.01
5594 5746 5.809051 GCCTTTTCTCTCATAATTTGCAAGG 59.191 40.000 0.00 0.00 0.00 3.61
5595 5747 6.573094 GCCTTTTCTCTCATAATTTGCAAGGT 60.573 38.462 0.00 0.00 31.44 3.50
5596 5748 7.362920 GCCTTTTCTCTCATAATTTGCAAGGTA 60.363 37.037 0.00 0.00 31.44 3.08
5597 5749 7.970614 CCTTTTCTCTCATAATTTGCAAGGTAC 59.029 37.037 0.00 0.00 0.00 3.34
5598 5750 7.994425 TTTCTCTCATAATTTGCAAGGTACA 57.006 32.000 0.00 0.00 0.00 2.90
5599 5751 6.985188 TCTCTCATAATTTGCAAGGTACAC 57.015 37.500 0.00 0.00 0.00 2.90
5600 5752 6.711277 TCTCTCATAATTTGCAAGGTACACT 58.289 36.000 0.00 0.00 0.00 3.55
5601 5753 6.818644 TCTCTCATAATTTGCAAGGTACACTC 59.181 38.462 0.00 0.00 0.00 3.51
5602 5754 5.880332 TCTCATAATTTGCAAGGTACACTCC 59.120 40.000 0.00 0.00 0.00 3.85
5603 5755 5.565509 TCATAATTTGCAAGGTACACTCCA 58.434 37.500 0.00 0.00 0.00 3.86
5604 5756 6.007076 TCATAATTTGCAAGGTACACTCCAA 58.993 36.000 0.00 0.00 0.00 3.53
5605 5757 4.853924 AATTTGCAAGGTACACTCCAAG 57.146 40.909 0.00 0.00 0.00 3.61
5606 5758 3.569194 TTTGCAAGGTACACTCCAAGA 57.431 42.857 0.00 0.00 0.00 3.02
5607 5759 2.839486 TGCAAGGTACACTCCAAGAG 57.161 50.000 0.00 0.00 35.52 2.85
5608 5760 1.347707 TGCAAGGTACACTCCAAGAGG 59.652 52.381 0.00 0.00 33.35 3.69
5609 5761 1.339151 GCAAGGTACACTCCAAGAGGG 60.339 57.143 0.00 0.00 39.30 4.30
5610 5762 2.257207 CAAGGTACACTCCAAGAGGGA 58.743 52.381 0.00 0.00 45.89 4.20
5619 5771 1.204146 TCCAAGAGGGAGAATTCCGG 58.796 55.000 0.65 0.00 40.64 5.14
5620 5772 0.464554 CCAAGAGGGAGAATTCCGGC 60.465 60.000 0.65 0.00 40.64 6.13
5621 5773 0.253044 CAAGAGGGAGAATTCCGGCA 59.747 55.000 0.65 0.00 40.64 5.69
5622 5774 0.543749 AAGAGGGAGAATTCCGGCAG 59.456 55.000 0.65 0.00 40.64 4.85
5623 5775 1.524849 GAGGGAGAATTCCGGCAGC 60.525 63.158 0.65 0.00 40.64 5.25
5624 5776 1.977293 GAGGGAGAATTCCGGCAGCT 61.977 60.000 0.65 0.00 40.64 4.24
5625 5777 1.821332 GGGAGAATTCCGGCAGCTG 60.821 63.158 10.11 10.11 45.04 4.24
5626 5778 1.821332 GGAGAATTCCGGCAGCTGG 60.821 63.158 15.05 15.05 32.79 4.85
5627 5779 1.221840 GAGAATTCCGGCAGCTGGA 59.778 57.895 20.07 20.07 37.09 3.86
5631 5783 4.319133 TTCCGGCAGCTGGAAATC 57.681 55.556 30.52 0.00 44.84 2.17
5632 5784 1.685224 TTCCGGCAGCTGGAAATCT 59.315 52.632 30.52 0.00 44.84 2.40
5633 5785 0.677731 TTCCGGCAGCTGGAAATCTG 60.678 55.000 30.52 2.83 44.84 2.90
5634 5786 2.117156 CCGGCAGCTGGAAATCTGG 61.117 63.158 16.28 8.81 29.82 3.86
5635 5787 1.078214 CGGCAGCTGGAAATCTGGA 60.078 57.895 17.12 0.00 0.00 3.86
5636 5788 1.372087 CGGCAGCTGGAAATCTGGAC 61.372 60.000 17.12 0.00 0.00 4.02
5637 5789 1.034292 GGCAGCTGGAAATCTGGACC 61.034 60.000 17.12 0.00 0.00 4.46
5638 5790 0.034670 GCAGCTGGAAATCTGGACCT 60.035 55.000 17.12 0.00 0.00 3.85
5639 5791 1.747709 CAGCTGGAAATCTGGACCTG 58.252 55.000 5.57 0.00 0.00 4.00
5640 5792 1.280133 CAGCTGGAAATCTGGACCTGA 59.720 52.381 5.57 3.23 0.00 3.86
5641 5793 1.988107 AGCTGGAAATCTGGACCTGAA 59.012 47.619 5.03 0.00 0.00 3.02
5642 5794 2.376518 AGCTGGAAATCTGGACCTGAAA 59.623 45.455 5.03 0.00 0.00 2.69
5643 5795 3.157087 GCTGGAAATCTGGACCTGAAAA 58.843 45.455 5.03 0.00 0.00 2.29
5644 5796 3.573967 GCTGGAAATCTGGACCTGAAAAA 59.426 43.478 5.03 0.00 0.00 1.94
5645 5797 4.321527 GCTGGAAATCTGGACCTGAAAAAG 60.322 45.833 5.03 1.39 0.00 2.27
5646 5798 3.573967 TGGAAATCTGGACCTGAAAAAGC 59.426 43.478 5.03 0.00 0.00 3.51
5647 5799 3.829026 GGAAATCTGGACCTGAAAAAGCT 59.171 43.478 5.03 0.00 0.00 3.74
5648 5800 5.010282 GGAAATCTGGACCTGAAAAAGCTA 58.990 41.667 5.03 0.00 0.00 3.32
5649 5801 5.106118 GGAAATCTGGACCTGAAAAAGCTAC 60.106 44.000 5.03 0.00 0.00 3.58
5650 5802 3.040147 TCTGGACCTGAAAAAGCTACG 57.960 47.619 0.00 0.00 0.00 3.51
5651 5803 2.367567 TCTGGACCTGAAAAAGCTACGT 59.632 45.455 0.00 0.00 0.00 3.57
5652 5804 2.737252 CTGGACCTGAAAAAGCTACGTC 59.263 50.000 0.00 0.00 0.00 4.34
5653 5805 2.103432 TGGACCTGAAAAAGCTACGTCA 59.897 45.455 0.00 0.00 0.00 4.35
5654 5806 2.737252 GGACCTGAAAAAGCTACGTCAG 59.263 50.000 11.64 11.64 37.77 3.51
5656 5808 2.882742 CTGAAAAAGCTACGTCAGGC 57.117 50.000 11.00 0.00 35.01 4.85
5657 5809 1.464997 CTGAAAAAGCTACGTCAGGCC 59.535 52.381 11.00 0.00 35.01 5.19
5658 5810 1.202710 TGAAAAAGCTACGTCAGGCCA 60.203 47.619 5.01 0.00 0.00 5.36
5659 5811 1.197036 GAAAAAGCTACGTCAGGCCAC 59.803 52.381 5.01 0.00 0.00 5.01
5660 5812 0.605589 AAAAGCTACGTCAGGCCACC 60.606 55.000 5.01 0.00 0.00 4.61
5661 5813 1.481056 AAAGCTACGTCAGGCCACCT 61.481 55.000 5.01 0.00 0.00 4.00
5662 5814 0.613853 AAGCTACGTCAGGCCACCTA 60.614 55.000 5.01 0.00 29.64 3.08
5663 5815 0.397254 AGCTACGTCAGGCCACCTAT 60.397 55.000 5.01 0.00 29.64 2.57
5664 5816 0.464452 GCTACGTCAGGCCACCTATT 59.536 55.000 5.01 0.00 29.64 1.73
5665 5817 1.538419 GCTACGTCAGGCCACCTATTC 60.538 57.143 5.01 0.00 29.64 1.75
5666 5818 2.032620 CTACGTCAGGCCACCTATTCT 58.967 52.381 5.01 0.00 29.64 2.40
5667 5819 0.537188 ACGTCAGGCCACCTATTCTG 59.463 55.000 5.01 0.00 29.64 3.02
5668 5820 0.811616 CGTCAGGCCACCTATTCTGC 60.812 60.000 5.01 0.00 29.64 4.26
5669 5821 0.253044 GTCAGGCCACCTATTCTGCA 59.747 55.000 5.01 0.00 29.64 4.41
5670 5822 0.253044 TCAGGCCACCTATTCTGCAC 59.747 55.000 5.01 0.00 29.64 4.57
5671 5823 0.035152 CAGGCCACCTATTCTGCACA 60.035 55.000 5.01 0.00 29.64 4.57
5672 5824 0.698238 AGGCCACCTATTCTGCACAA 59.302 50.000 5.01 0.00 28.47 3.33
5673 5825 0.811281 GGCCACCTATTCTGCACAAC 59.189 55.000 0.00 0.00 0.00 3.32
5674 5826 1.614317 GGCCACCTATTCTGCACAACT 60.614 52.381 0.00 0.00 0.00 3.16
5675 5827 1.740025 GCCACCTATTCTGCACAACTC 59.260 52.381 0.00 0.00 0.00 3.01
5676 5828 2.359900 CCACCTATTCTGCACAACTCC 58.640 52.381 0.00 0.00 0.00 3.85
5677 5829 2.290260 CCACCTATTCTGCACAACTCCA 60.290 50.000 0.00 0.00 0.00 3.86
5678 5830 3.411446 CACCTATTCTGCACAACTCCAA 58.589 45.455 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
974 1085 3.721706 CGGCTGCCCCTTCTCCTT 61.722 66.667 14.12 0.00 0.00 3.36
1053 1164 3.008923 CCACCCCCAATATTGCAAAAAGT 59.991 43.478 10.11 0.00 0.00 2.66
1054 1165 3.608796 CCACCCCCAATATTGCAAAAAG 58.391 45.455 10.11 0.00 0.00 2.27
1055 1166 2.290577 GCCACCCCCAATATTGCAAAAA 60.291 45.455 10.11 0.00 0.00 1.94
1130 1241 4.803088 ACACAACAATGTCGAAATTGGTTG 59.197 37.500 27.74 26.49 41.06 3.77
1208 1319 1.368345 TTCCGTGGCAGCAATCGATG 61.368 55.000 0.00 0.00 0.00 3.84
1232 1343 2.623878 ATGAGCAGAAGCAGAGGATG 57.376 50.000 0.00 0.00 45.49 3.51
1315 1426 1.584724 TCTTCCCATCTTCCCCTCAC 58.415 55.000 0.00 0.00 0.00 3.51
1347 1458 1.067821 CCTCTCTTGGCAGACCGTATC 59.932 57.143 0.00 0.00 39.70 2.24
1395 1506 4.639334 CAGCCATATCTGCTACTGATTGT 58.361 43.478 0.00 0.00 36.81 2.71
1426 1537 5.047021 TCAGACACTCAAATTCACCTCCTAG 60.047 44.000 0.00 0.00 0.00 3.02
1470 1581 3.262420 GAAGAGCAGGAAATTGTCGCTA 58.738 45.455 0.00 0.00 31.86 4.26
1483 1594 3.668447 TCAGTAGGCTTTTGAAGAGCAG 58.332 45.455 10.00 0.00 41.89 4.24
1509 1620 4.024556 GCATAATCTTGGGAGTTCACATCG 60.025 45.833 0.00 0.00 0.00 3.84
1521 1632 3.181483 GCAGAAGGTTGGCATAATCTTGG 60.181 47.826 3.49 0.00 0.00 3.61
1522 1633 3.698040 AGCAGAAGGTTGGCATAATCTTG 59.302 43.478 3.49 0.00 0.00 3.02
1557 1668 5.876460 GCAGGCTCCAAACATTTTTGATATT 59.124 36.000 5.90 0.00 44.38 1.28
1563 1674 1.072173 GGGCAGGCTCCAAACATTTTT 59.928 47.619 0.00 0.00 0.00 1.94
1568 1679 0.899717 GAATGGGCAGGCTCCAAACA 60.900 55.000 0.00 0.00 37.87 2.83
1584 1695 0.744414 CGACCGCCAATGTCAGGAAT 60.744 55.000 0.00 0.00 32.91 3.01
1590 1701 1.131826 CGAAACGACCGCCAATGTC 59.868 57.895 0.00 0.00 0.00 3.06
1615 1726 5.414454 TCCAACTAGTTTTCAAATCATCCCG 59.586 40.000 5.07 0.00 0.00 5.14
1641 1752 3.058293 ACCAATGTTGTTGCAGTACATCG 60.058 43.478 9.83 6.96 31.63 3.84
1765 1876 2.224402 TGTAAAATTTGTGCCCCCTTGC 60.224 45.455 0.00 0.00 0.00 4.01
1795 1906 2.551270 ACTGACCCACATGTCTACCAT 58.449 47.619 0.00 0.00 36.21 3.55
1882 1993 2.704572 GACATCCACTGGGTTCAGAAG 58.295 52.381 0.00 0.00 43.49 2.85
1920 2031 4.510571 AGAATGATTTTCTTGCCAATGCC 58.489 39.130 0.00 0.00 36.33 4.40
1927 2038 4.448732 ACGGCAAAAGAATGATTTTCTTGC 59.551 37.500 0.00 0.00 38.62 4.01
1954 2065 3.610911 CCCCACAAGGATCTGTTTCTAC 58.389 50.000 0.00 0.00 38.24 2.59
1956 2067 1.272147 GCCCCACAAGGATCTGTTTCT 60.272 52.381 0.00 0.00 38.24 2.52
1974 2085 9.435688 AAAACATAATATTCTTTCTGGTTTGCC 57.564 29.630 0.00 0.00 0.00 4.52
2028 2139 2.266554 CATTCACCTCGAGAGACAAGC 58.733 52.381 15.71 0.00 35.39 4.01
2218 2329 6.064060 TCTTCAGAATCTCTCCAAGCAAAAA 58.936 36.000 0.00 0.00 0.00 1.94
2244 2355 0.780002 GCAGACGCAAGCATTTTGTG 59.220 50.000 0.00 0.00 45.62 3.33
2256 2367 0.453950 CAGACAATTGCAGCAGACGC 60.454 55.000 5.05 0.00 38.99 5.19
2259 2370 0.594602 GCACAGACAATTGCAGCAGA 59.405 50.000 5.05 0.00 38.68 4.26
2381 2492 5.104776 AGCTTGAATACTTGCAGATGGTAGA 60.105 40.000 0.00 0.00 0.00 2.59
2466 2577 8.162878 ACATATTGTCAGGAATATGCAAAGAG 57.837 34.615 11.45 0.00 44.85 2.85
2619 2730 9.431887 CAATTCTGGACATTTTGAAGATTCATT 57.568 29.630 0.00 0.00 37.00 2.57
2640 2751 3.814283 CCTCCATAGCTTCTCTGCAATTC 59.186 47.826 0.00 0.00 34.99 2.17
2734 2845 8.853077 TGATTACCAATAATCTGATCATCCAC 57.147 34.615 0.00 0.00 44.88 4.02
2736 2847 9.676861 TCATGATTACCAATAATCTGATCATCC 57.323 33.333 0.00 0.00 44.88 3.51
2751 2862 6.334378 TCCCTATTTGGTTCATGATTACCA 57.666 37.500 14.15 14.15 42.48 3.25
2754 2865 9.486123 TGAATTTCCCTATTTGGTTCATGATTA 57.514 29.630 0.00 0.00 0.00 1.75
2929 3040 4.613944 TGAAAAAGATGCTGCAACTTCAG 58.386 39.130 22.76 0.00 37.15 3.02
2972 3083 3.243468 GGTATCAGTTAGTTCCTCGAGCC 60.243 52.174 6.99 0.00 0.00 4.70
2977 3088 7.987458 TGATTCATTGGTATCAGTTAGTTCCTC 59.013 37.037 0.00 0.00 0.00 3.71
2982 3093 6.386927 TCCCTGATTCATTGGTATCAGTTAGT 59.613 38.462 19.35 0.00 43.52 2.24
3001 3112 3.502356 GGGGTAAACAAACAATCCCTGA 58.498 45.455 0.00 0.00 35.65 3.86
3066 3177 5.392165 GCTAGGAGGTATAGTGCGAAGTATG 60.392 48.000 0.52 0.00 0.00 2.39
3074 3185 3.231818 TCAAGGCTAGGAGGTATAGTGC 58.768 50.000 0.00 0.00 0.00 4.40
3093 3204 7.498900 CCAACATGCTTTAATATCAGTACCTCA 59.501 37.037 0.00 0.00 0.00 3.86
3120 3231 7.166167 GGTGTATTCCTGGAAGAACTAGAAAA 58.834 38.462 15.34 0.00 34.07 2.29
3124 3235 5.422331 TCTGGTGTATTCCTGGAAGAACTAG 59.578 44.000 15.34 17.19 34.07 2.57
3126 3237 4.168101 TCTGGTGTATTCCTGGAAGAACT 58.832 43.478 15.34 0.25 34.07 3.01
3171 3282 6.727824 ATGTGTACAAATGTAAGCTCAGAC 57.272 37.500 0.00 0.00 31.52 3.51
3389 3500 6.870769 AGTGAAATTGGCAGAATATTTCCTG 58.129 36.000 15.93 0.78 37.43 3.86
3537 3648 3.378427 GCAGAGTTCCAAATATTTCCGCT 59.622 43.478 0.00 0.00 0.00 5.52
3798 3909 0.036952 AGGACTCCATTGCACAGTCG 60.037 55.000 0.00 0.00 37.95 4.18
4033 4144 3.699538 GGACCAACATCCTTTTCATACCC 59.300 47.826 0.00 0.00 35.68 3.69
4034 4145 3.377172 CGGACCAACATCCTTTTCATACC 59.623 47.826 0.00 0.00 36.52 2.73
4097 4208 0.174845 CGCACCTTCGGAATAGGACA 59.825 55.000 2.77 0.00 36.58 4.02
4107 4218 0.868406 AGAAAGAAAGCGCACCTTCG 59.132 50.000 11.47 0.00 31.99 3.79
4190 4301 6.899393 TCCATGTCAGTTAGAAGCAAAAAT 57.101 33.333 0.00 0.00 0.00 1.82
4253 4364 8.423906 ACATATTCGATCAGGTTATCCTTAGT 57.576 34.615 0.00 0.00 43.07 2.24
4265 4376 6.908870 TTGGTGAAAGACATATTCGATCAG 57.091 37.500 0.00 0.00 0.00 2.90
4269 4380 5.705441 AGCTTTTGGTGAAAGACATATTCGA 59.295 36.000 2.89 0.00 46.24 3.71
4270 4381 5.942872 AGCTTTTGGTGAAAGACATATTCG 58.057 37.500 2.89 0.00 46.24 3.34
4277 4388 4.998788 AGAACAAGCTTTTGGTGAAAGAC 58.001 39.130 0.00 0.00 46.24 3.01
4303 4414 2.076100 CAGCGTCATCAAAGGCACTAA 58.924 47.619 0.00 0.00 38.49 2.24
4306 4417 1.394917 CTACAGCGTCATCAAAGGCAC 59.605 52.381 0.00 0.00 32.56 5.01
4309 4420 1.394917 GTGCTACAGCGTCATCAAAGG 59.605 52.381 0.00 0.00 45.83 3.11
4331 4442 4.859798 GGCATACTGCTAGAATCACGATAC 59.140 45.833 0.00 0.00 44.28 2.24
4375 4486 6.538021 ACATCTCAGCAACATCTCTGATAAAC 59.462 38.462 0.00 0.00 38.50 2.01
4469 4612 6.206243 CAGGCCAATGGTCTCTATCATAAAAG 59.794 42.308 2.04 0.00 34.19 2.27
4490 4633 3.181470 TGCCAGGAAAAACTTTAACAGGC 60.181 43.478 0.00 0.00 38.82 4.85
4491 4634 4.620982 CTGCCAGGAAAAACTTTAACAGG 58.379 43.478 0.00 0.00 0.00 4.00
4507 4650 3.760684 AGAAGAAACCTAAATGCTGCCAG 59.239 43.478 0.00 0.00 0.00 4.85
4566 4709 9.849607 CATGAGTAATTGTACGTTGTGAATATC 57.150 33.333 0.00 0.00 35.20 1.63
4610 4753 7.621428 TCTCAAAACCTTGAATCTGATCATC 57.379 36.000 0.00 0.00 41.05 2.92
4642 4785 6.899393 ACAAATTGATGGCGTGGATTATAT 57.101 33.333 0.00 0.00 0.00 0.86
4749 4892 5.451937 CGAGGCCTAGACTGTAATTTCATCA 60.452 44.000 4.42 0.00 0.00 3.07
4755 4898 3.097614 ACACGAGGCCTAGACTGTAATT 58.902 45.455 20.86 0.00 0.00 1.40
4766 4909 2.037772 GGATCATATTCACACGAGGCCT 59.962 50.000 3.86 3.86 0.00 5.19
4789 4932 4.999950 GTGCTATATACTGGCAGCAAGATT 59.000 41.667 15.89 0.00 44.99 2.40
4798 4941 2.221055 GTGTTGCGTGCTATATACTGGC 59.779 50.000 0.00 0.00 0.00 4.85
4803 4946 2.696187 TCTGGGTGTTGCGTGCTATATA 59.304 45.455 0.00 0.00 0.00 0.86
4805 4948 0.899019 TCTGGGTGTTGCGTGCTATA 59.101 50.000 0.00 0.00 0.00 1.31
4806 4949 0.036164 TTCTGGGTGTTGCGTGCTAT 59.964 50.000 0.00 0.00 0.00 2.97
4807 4950 0.036164 ATTCTGGGTGTTGCGTGCTA 59.964 50.000 0.00 0.00 0.00 3.49
4808 4951 1.228245 ATTCTGGGTGTTGCGTGCT 60.228 52.632 0.00 0.00 0.00 4.40
4809 4952 1.081242 CATTCTGGGTGTTGCGTGC 60.081 57.895 0.00 0.00 0.00 5.34
4810 4953 1.081242 GCATTCTGGGTGTTGCGTG 60.081 57.895 0.00 0.00 0.00 5.34
4811 4954 1.518056 CTGCATTCTGGGTGTTGCGT 61.518 55.000 0.00 0.00 37.92 5.24
4812 4955 1.210931 CTGCATTCTGGGTGTTGCG 59.789 57.895 0.00 0.00 37.92 4.85
4813 4956 1.080298 GCTGCATTCTGGGTGTTGC 60.080 57.895 0.00 0.00 35.67 4.17
4814 4957 0.675083 TTGCTGCATTCTGGGTGTTG 59.325 50.000 1.84 0.00 0.00 3.33
4844 4987 7.575532 GCTCCATGAACATTGAATACAGACAAA 60.576 37.037 0.00 0.00 0.00 2.83
4845 4988 6.127925 GCTCCATGAACATTGAATACAGACAA 60.128 38.462 0.00 0.00 0.00 3.18
4846 4989 5.355071 GCTCCATGAACATTGAATACAGACA 59.645 40.000 0.00 0.00 0.00 3.41
4847 4990 5.503031 CGCTCCATGAACATTGAATACAGAC 60.503 44.000 0.00 0.00 0.00 3.51
4848 4991 4.571984 CGCTCCATGAACATTGAATACAGA 59.428 41.667 0.00 0.00 0.00 3.41
4849 4992 4.333649 ACGCTCCATGAACATTGAATACAG 59.666 41.667 0.00 0.00 0.00 2.74
4850 4993 4.094739 CACGCTCCATGAACATTGAATACA 59.905 41.667 0.00 0.00 0.00 2.29
4851 4994 4.496341 CCACGCTCCATGAACATTGAATAC 60.496 45.833 0.00 0.00 0.00 1.89
4852 4995 3.627123 CCACGCTCCATGAACATTGAATA 59.373 43.478 0.00 0.00 0.00 1.75
4853 4996 2.424601 CCACGCTCCATGAACATTGAAT 59.575 45.455 0.00 0.00 0.00 2.57
4854 4997 1.811965 CCACGCTCCATGAACATTGAA 59.188 47.619 0.00 0.00 0.00 2.69
4855 4998 1.452110 CCACGCTCCATGAACATTGA 58.548 50.000 0.00 0.00 0.00 2.57
4856 4999 0.452987 CCCACGCTCCATGAACATTG 59.547 55.000 0.00 0.00 0.00 2.82
4857 5000 0.680921 CCCCACGCTCCATGAACATT 60.681 55.000 0.00 0.00 0.00 2.71
4858 5001 1.077501 CCCCACGCTCCATGAACAT 60.078 57.895 0.00 0.00 0.00 2.71
4859 5002 2.350895 CCCCACGCTCCATGAACA 59.649 61.111 0.00 0.00 0.00 3.18
4860 5003 2.438434 CCCCCACGCTCCATGAAC 60.438 66.667 0.00 0.00 0.00 3.18
4861 5004 2.933287 ACCCCCACGCTCCATGAA 60.933 61.111 0.00 0.00 0.00 2.57
4862 5005 3.716195 CACCCCCACGCTCCATGA 61.716 66.667 0.00 0.00 0.00 3.07
4863 5006 2.947938 GATCACCCCCACGCTCCATG 62.948 65.000 0.00 0.00 0.00 3.66
4864 5007 2.692368 ATCACCCCCACGCTCCAT 60.692 61.111 0.00 0.00 0.00 3.41
4865 5008 3.399181 GATCACCCCCACGCTCCA 61.399 66.667 0.00 0.00 0.00 3.86
4866 5009 3.083997 AGATCACCCCCACGCTCC 61.084 66.667 0.00 0.00 0.00 4.70
4867 5010 1.899437 TTCAGATCACCCCCACGCTC 61.899 60.000 0.00 0.00 0.00 5.03
4868 5011 1.918293 TTCAGATCACCCCCACGCT 60.918 57.895 0.00 0.00 0.00 5.07
4869 5012 1.745489 GTTCAGATCACCCCCACGC 60.745 63.158 0.00 0.00 0.00 5.34
4870 5013 0.324943 AAGTTCAGATCACCCCCACG 59.675 55.000 0.00 0.00 0.00 4.94
4871 5014 2.558359 CAAAAGTTCAGATCACCCCCAC 59.442 50.000 0.00 0.00 0.00 4.61
4872 5015 2.445145 TCAAAAGTTCAGATCACCCCCA 59.555 45.455 0.00 0.00 0.00 4.96
4873 5016 3.084786 CTCAAAAGTTCAGATCACCCCC 58.915 50.000 0.00 0.00 0.00 5.40
4874 5017 3.084786 CCTCAAAAGTTCAGATCACCCC 58.915 50.000 0.00 0.00 0.00 4.95
4875 5018 3.756117 ACCTCAAAAGTTCAGATCACCC 58.244 45.455 0.00 0.00 0.00 4.61
4876 5019 4.022849 CCAACCTCAAAAGTTCAGATCACC 60.023 45.833 0.00 0.00 0.00 4.02
4877 5020 4.580580 ACCAACCTCAAAAGTTCAGATCAC 59.419 41.667 0.00 0.00 0.00 3.06
4878 5021 4.792068 ACCAACCTCAAAAGTTCAGATCA 58.208 39.130 0.00 0.00 0.00 2.92
4879 5022 8.738645 ATATACCAACCTCAAAAGTTCAGATC 57.261 34.615 0.00 0.00 0.00 2.75
4880 5023 9.533831 AAATATACCAACCTCAAAAGTTCAGAT 57.466 29.630 0.00 0.00 0.00 2.90
4881 5024 8.792633 CAAATATACCAACCTCAAAAGTTCAGA 58.207 33.333 0.00 0.00 0.00 3.27
4882 5025 8.576442 ACAAATATACCAACCTCAAAAGTTCAG 58.424 33.333 0.00 0.00 0.00 3.02
4883 5026 8.472007 ACAAATATACCAACCTCAAAAGTTCA 57.528 30.769 0.00 0.00 0.00 3.18
4884 5027 8.793592 AGACAAATATACCAACCTCAAAAGTTC 58.206 33.333 0.00 0.00 0.00 3.01
4885 5028 8.706322 AGACAAATATACCAACCTCAAAAGTT 57.294 30.769 0.00 0.00 0.00 2.66
4886 5029 7.393515 GGAGACAAATATACCAACCTCAAAAGT 59.606 37.037 0.00 0.00 0.00 2.66
4887 5030 7.611855 AGGAGACAAATATACCAACCTCAAAAG 59.388 37.037 0.00 0.00 0.00 2.27
4888 5031 7.393234 CAGGAGACAAATATACCAACCTCAAAA 59.607 37.037 0.00 0.00 0.00 2.44
4889 5032 6.884295 CAGGAGACAAATATACCAACCTCAAA 59.116 38.462 0.00 0.00 0.00 2.69
4890 5033 6.414732 CAGGAGACAAATATACCAACCTCAA 58.585 40.000 0.00 0.00 0.00 3.02
4891 5034 5.104527 CCAGGAGACAAATATACCAACCTCA 60.105 44.000 0.00 0.00 0.00 3.86
4892 5035 5.368989 CCAGGAGACAAATATACCAACCTC 58.631 45.833 0.00 0.00 0.00 3.85
4893 5036 4.166144 CCCAGGAGACAAATATACCAACCT 59.834 45.833 0.00 0.00 0.00 3.50
4894 5037 4.461198 CCCAGGAGACAAATATACCAACC 58.539 47.826 0.00 0.00 0.00 3.77
4895 5038 4.079958 ACCCCAGGAGACAAATATACCAAC 60.080 45.833 0.00 0.00 0.00 3.77
4896 5039 4.080015 CACCCCAGGAGACAAATATACCAA 60.080 45.833 0.00 0.00 0.00 3.67
4897 5040 3.458118 CACCCCAGGAGACAAATATACCA 59.542 47.826 0.00 0.00 0.00 3.25
4898 5041 3.458487 ACACCCCAGGAGACAAATATACC 59.542 47.826 0.00 0.00 0.00 2.73
4899 5042 4.772886 ACACCCCAGGAGACAAATATAC 57.227 45.455 0.00 0.00 0.00 1.47
4900 5043 5.968167 ACTAACACCCCAGGAGACAAATATA 59.032 40.000 0.00 0.00 0.00 0.86
4901 5044 4.788617 ACTAACACCCCAGGAGACAAATAT 59.211 41.667 0.00 0.00 0.00 1.28
4902 5045 4.019681 CACTAACACCCCAGGAGACAAATA 60.020 45.833 0.00 0.00 0.00 1.40
4903 5046 2.986728 ACTAACACCCCAGGAGACAAAT 59.013 45.455 0.00 0.00 0.00 2.32
4904 5047 2.105821 CACTAACACCCCAGGAGACAAA 59.894 50.000 0.00 0.00 0.00 2.83
4905 5048 1.697432 CACTAACACCCCAGGAGACAA 59.303 52.381 0.00 0.00 0.00 3.18
4906 5049 1.348064 CACTAACACCCCAGGAGACA 58.652 55.000 0.00 0.00 0.00 3.41
4907 5050 0.613777 CCACTAACACCCCAGGAGAC 59.386 60.000 0.00 0.00 0.00 3.36
4908 5051 1.198759 GCCACTAACACCCCAGGAGA 61.199 60.000 0.00 0.00 0.00 3.71
4909 5052 1.201429 AGCCACTAACACCCCAGGAG 61.201 60.000 0.00 0.00 0.00 3.69
4910 5053 1.151899 AGCCACTAACACCCCAGGA 60.152 57.895 0.00 0.00 0.00 3.86
4911 5054 1.002134 CAGCCACTAACACCCCAGG 60.002 63.158 0.00 0.00 0.00 4.45
4912 5055 1.002134 CCAGCCACTAACACCCCAG 60.002 63.158 0.00 0.00 0.00 4.45
4913 5056 3.166434 CCAGCCACTAACACCCCA 58.834 61.111 0.00 0.00 0.00 4.96
4914 5057 2.361230 GCCAGCCACTAACACCCC 60.361 66.667 0.00 0.00 0.00 4.95
4915 5058 1.000896 ATGCCAGCCACTAACACCC 60.001 57.895 0.00 0.00 0.00 4.61
4916 5059 1.315257 CCATGCCAGCCACTAACACC 61.315 60.000 0.00 0.00 0.00 4.16
4917 5060 0.609131 ACCATGCCAGCCACTAACAC 60.609 55.000 0.00 0.00 0.00 3.32
4918 5061 0.988063 TACCATGCCAGCCACTAACA 59.012 50.000 0.00 0.00 0.00 2.41
4919 5062 2.348411 ATACCATGCCAGCCACTAAC 57.652 50.000 0.00 0.00 0.00 2.34
5016 5159 6.594744 TGATATCACCATATGACCATATGCC 58.405 40.000 19.44 7.00 45.72 4.40
5051 5202 6.071503 GGTTCCAGACAGTAAGTAAGCTTCTA 60.072 42.308 0.00 0.00 36.22 2.10
5056 5207 4.538746 AGGTTCCAGACAGTAAGTAAGC 57.461 45.455 0.00 0.00 0.00 3.09
5061 5212 4.962155 AGTTCAAGGTTCCAGACAGTAAG 58.038 43.478 0.00 0.00 0.00 2.34
5078 5229 3.009033 CCTGGAAACCCATCTGTAGTTCA 59.991 47.826 0.00 0.00 32.36 3.18
5105 5256 4.675063 AAGGTGGTTCATTTCATACCCT 57.325 40.909 0.00 0.00 0.00 4.34
5128 5279 5.357878 ACTGAACATTTGCAAGAGAGTTTCA 59.642 36.000 0.00 3.93 0.00 2.69
5144 5295 4.464008 ACCACAATCAACTGACTGAACAT 58.536 39.130 0.00 0.00 0.00 2.71
5150 5301 2.951642 CCACAACCACAATCAACTGACT 59.048 45.455 0.00 0.00 0.00 3.41
5163 5314 1.228793 CACCTTCACCCCACAACCA 59.771 57.895 0.00 0.00 0.00 3.67
5175 5326 1.805945 ATCGACGCGCTTCACCTTC 60.806 57.895 14.72 0.00 0.00 3.46
5230 5381 8.177119 TCAACAGCTTTTCTGGTTATTTACAT 57.823 30.769 0.00 0.00 40.58 2.29
5236 5387 6.006449 AGACATCAACAGCTTTTCTGGTTAT 58.994 36.000 0.00 0.00 40.58 1.89
5248 5399 3.601443 AGGAGTACAGACATCAACAGC 57.399 47.619 0.00 0.00 0.00 4.40
5276 5427 4.584638 AGAGTACAGAGATCAGACACCT 57.415 45.455 0.00 0.00 0.00 4.00
5329 5481 4.597404 TGACAATGCAATTTTAGCCACA 57.403 36.364 0.00 0.00 31.22 4.17
5330 5482 5.921004 TTTGACAATGCAATTTTAGCCAC 57.079 34.783 0.00 0.00 31.22 5.01
5369 5521 7.386025 GCAGCATGATGAATATCTACACTGTTA 59.614 37.037 16.67 0.00 39.69 2.41
5405 5557 8.796475 ACACAGAAATTACAGTTCAGCAATTAT 58.204 29.630 0.00 0.00 0.00 1.28
5418 5570 6.072175 GGAAATGTAGCCACACAGAAATTACA 60.072 38.462 0.00 0.00 37.54 2.41
5427 5579 5.172687 TCAATAGGAAATGTAGCCACACA 57.827 39.130 0.00 0.00 37.54 3.72
5428 5580 6.699575 ATTCAATAGGAAATGTAGCCACAC 57.300 37.500 0.00 0.00 39.39 3.82
5441 5593 5.591472 CAGTTGGAGCATGAATTCAATAGGA 59.409 40.000 13.09 0.00 0.00 2.94
5442 5594 5.359009 ACAGTTGGAGCATGAATTCAATAGG 59.641 40.000 13.09 3.99 0.00 2.57
5462 5614 4.536489 ACTCCCCAAGCTTAGAATTACAGT 59.464 41.667 0.00 0.00 0.00 3.55
5463 5615 5.104259 ACTCCCCAAGCTTAGAATTACAG 57.896 43.478 0.00 0.00 0.00 2.74
5464 5616 5.013704 TCAACTCCCCAAGCTTAGAATTACA 59.986 40.000 0.00 0.00 0.00 2.41
5465 5617 5.497474 TCAACTCCCCAAGCTTAGAATTAC 58.503 41.667 0.00 0.00 0.00 1.89
5466 5618 5.772393 TCAACTCCCCAAGCTTAGAATTA 57.228 39.130 0.00 0.00 0.00 1.40
5467 5619 4.657814 TCAACTCCCCAAGCTTAGAATT 57.342 40.909 0.00 0.00 0.00 2.17
5468 5620 4.870021 ATCAACTCCCCAAGCTTAGAAT 57.130 40.909 0.00 0.00 0.00 2.40
5469 5621 4.382685 CGTATCAACTCCCCAAGCTTAGAA 60.383 45.833 0.00 0.00 0.00 2.10
5470 5622 3.132289 CGTATCAACTCCCCAAGCTTAGA 59.868 47.826 0.00 0.00 0.00 2.10
5471 5623 3.118738 ACGTATCAACTCCCCAAGCTTAG 60.119 47.826 0.00 0.00 0.00 2.18
5472 5624 2.835764 ACGTATCAACTCCCCAAGCTTA 59.164 45.455 0.00 0.00 0.00 3.09
5473 5625 1.628846 ACGTATCAACTCCCCAAGCTT 59.371 47.619 0.00 0.00 0.00 3.74
5474 5626 1.207329 GACGTATCAACTCCCCAAGCT 59.793 52.381 0.00 0.00 0.00 3.74
5475 5627 1.653151 GACGTATCAACTCCCCAAGC 58.347 55.000 0.00 0.00 0.00 4.01
5476 5628 1.553248 TGGACGTATCAACTCCCCAAG 59.447 52.381 0.00 0.00 0.00 3.61
5477 5629 1.646912 TGGACGTATCAACTCCCCAA 58.353 50.000 0.00 0.00 0.00 4.12
5478 5630 1.874129 ATGGACGTATCAACTCCCCA 58.126 50.000 0.00 0.00 0.00 4.96
5479 5631 3.277142 AAATGGACGTATCAACTCCCC 57.723 47.619 0.00 0.00 0.00 4.81
5480 5632 3.181500 GCAAAATGGACGTATCAACTCCC 60.181 47.826 0.00 0.00 0.00 4.30
5481 5633 3.438781 TGCAAAATGGACGTATCAACTCC 59.561 43.478 0.00 0.00 0.00 3.85
5482 5634 4.678509 TGCAAAATGGACGTATCAACTC 57.321 40.909 0.00 0.00 0.00 3.01
5483 5635 4.699735 TGATGCAAAATGGACGTATCAACT 59.300 37.500 0.00 0.00 30.28 3.16
5484 5636 4.980590 TGATGCAAAATGGACGTATCAAC 58.019 39.130 0.00 0.00 30.28 3.18
5485 5637 5.125257 ACATGATGCAAAATGGACGTATCAA 59.875 36.000 14.45 0.00 35.77 2.57
5486 5638 4.639755 ACATGATGCAAAATGGACGTATCA 59.360 37.500 14.45 0.00 36.43 2.15
5487 5639 5.173774 ACATGATGCAAAATGGACGTATC 57.826 39.130 14.45 0.00 0.00 2.24
5488 5640 5.581126 AACATGATGCAAAATGGACGTAT 57.419 34.783 14.45 0.00 0.00 3.06
5489 5641 5.384063 AAACATGATGCAAAATGGACGTA 57.616 34.783 14.45 0.00 0.00 3.57
5490 5642 3.940209 AACATGATGCAAAATGGACGT 57.060 38.095 14.45 0.00 0.00 4.34
5491 5643 4.925054 AGAAAACATGATGCAAAATGGACG 59.075 37.500 14.45 0.00 0.00 4.79
5492 5644 6.790285 AAGAAAACATGATGCAAAATGGAC 57.210 33.333 14.45 5.09 0.00 4.02
5493 5645 7.599621 CAGTAAGAAAACATGATGCAAAATGGA 59.400 33.333 14.45 0.00 0.00 3.41
5494 5646 7.385752 ACAGTAAGAAAACATGATGCAAAATGG 59.614 33.333 14.45 0.00 0.00 3.16
5495 5647 8.301730 ACAGTAAGAAAACATGATGCAAAATG 57.698 30.769 0.00 9.74 0.00 2.32
5496 5648 8.891671 AACAGTAAGAAAACATGATGCAAAAT 57.108 26.923 0.00 0.00 0.00 1.82
5497 5649 9.979578 ATAACAGTAAGAAAACATGATGCAAAA 57.020 25.926 0.00 0.00 0.00 2.44
5498 5650 9.979578 AATAACAGTAAGAAAACATGATGCAAA 57.020 25.926 0.00 0.00 0.00 3.68
5499 5651 9.979578 AAATAACAGTAAGAAAACATGATGCAA 57.020 25.926 0.00 0.00 0.00 4.08
5533 5685 9.820725 CTCCAAAAAGCATTATCATGGATAAAA 57.179 29.630 3.08 0.00 37.92 1.52
5534 5686 8.980596 ACTCCAAAAAGCATTATCATGGATAAA 58.019 29.630 3.08 0.00 37.92 1.40
5535 5687 8.537728 ACTCCAAAAAGCATTATCATGGATAA 57.462 30.769 1.54 1.54 38.61 1.75
5536 5688 9.639563 TTACTCCAAAAAGCATTATCATGGATA 57.360 29.630 0.00 0.00 35.15 2.59
5537 5689 8.537728 TTACTCCAAAAAGCATTATCATGGAT 57.462 30.769 0.00 0.00 35.15 3.41
5538 5690 7.953005 TTACTCCAAAAAGCATTATCATGGA 57.047 32.000 0.00 0.00 34.52 3.41
5539 5691 9.252962 GAATTACTCCAAAAAGCATTATCATGG 57.747 33.333 0.00 0.00 0.00 3.66
5545 5697 9.801873 GCATTAGAATTACTCCAAAAAGCATTA 57.198 29.630 0.00 0.00 0.00 1.90
5546 5698 7.765819 GGCATTAGAATTACTCCAAAAAGCATT 59.234 33.333 0.00 0.00 0.00 3.56
5547 5699 7.124750 AGGCATTAGAATTACTCCAAAAAGCAT 59.875 33.333 0.00 0.00 0.00 3.79
5548 5700 6.437162 AGGCATTAGAATTACTCCAAAAAGCA 59.563 34.615 0.00 0.00 0.00 3.91
5549 5701 6.867550 AGGCATTAGAATTACTCCAAAAAGC 58.132 36.000 0.00 0.00 0.00 3.51
5550 5702 9.710900 AAAAGGCATTAGAATTACTCCAAAAAG 57.289 29.630 0.00 0.00 0.00 2.27
5551 5703 9.705290 GAAAAGGCATTAGAATTACTCCAAAAA 57.295 29.630 0.00 0.00 0.00 1.94
5552 5704 9.088987 AGAAAAGGCATTAGAATTACTCCAAAA 57.911 29.630 0.00 0.00 0.00 2.44
5553 5705 8.650143 AGAAAAGGCATTAGAATTACTCCAAA 57.350 30.769 0.00 0.00 0.00 3.28
5554 5706 8.109634 AGAGAAAAGGCATTAGAATTACTCCAA 58.890 33.333 0.00 0.00 0.00 3.53
5555 5707 7.633789 AGAGAAAAGGCATTAGAATTACTCCA 58.366 34.615 0.00 0.00 0.00 3.86
5556 5708 7.770897 TGAGAGAAAAGGCATTAGAATTACTCC 59.229 37.037 0.00 0.00 0.00 3.85
5557 5709 8.723942 TGAGAGAAAAGGCATTAGAATTACTC 57.276 34.615 0.00 0.00 0.00 2.59
5564 5716 8.408601 GCAAATTATGAGAGAAAAGGCATTAGA 58.591 33.333 0.00 0.00 0.00 2.10
5565 5717 8.192774 TGCAAATTATGAGAGAAAAGGCATTAG 58.807 33.333 0.00 0.00 0.00 1.73
5566 5718 8.065473 TGCAAATTATGAGAGAAAAGGCATTA 57.935 30.769 0.00 0.00 0.00 1.90
5567 5719 6.938507 TGCAAATTATGAGAGAAAAGGCATT 58.061 32.000 0.00 0.00 0.00 3.56
5568 5720 6.534475 TGCAAATTATGAGAGAAAAGGCAT 57.466 33.333 0.00 0.00 0.00 4.40
5569 5721 5.981088 TGCAAATTATGAGAGAAAAGGCA 57.019 34.783 0.00 0.00 0.00 4.75
5570 5722 5.809051 CCTTGCAAATTATGAGAGAAAAGGC 59.191 40.000 0.00 0.00 0.00 4.35
5571 5723 6.928520 ACCTTGCAAATTATGAGAGAAAAGG 58.071 36.000 0.00 0.00 37.16 3.11
5572 5724 8.514594 TGTACCTTGCAAATTATGAGAGAAAAG 58.485 33.333 0.00 0.00 0.00 2.27
5573 5725 8.296713 GTGTACCTTGCAAATTATGAGAGAAAA 58.703 33.333 0.00 0.00 0.00 2.29
5574 5726 7.665559 AGTGTACCTTGCAAATTATGAGAGAAA 59.334 33.333 0.00 0.00 0.00 2.52
5575 5727 7.168219 AGTGTACCTTGCAAATTATGAGAGAA 58.832 34.615 0.00 0.00 0.00 2.87
5576 5728 6.711277 AGTGTACCTTGCAAATTATGAGAGA 58.289 36.000 0.00 0.00 0.00 3.10
5577 5729 6.037610 GGAGTGTACCTTGCAAATTATGAGAG 59.962 42.308 0.00 0.00 0.00 3.20
5578 5730 5.880332 GGAGTGTACCTTGCAAATTATGAGA 59.120 40.000 0.00 0.00 0.00 3.27
5579 5731 5.647658 TGGAGTGTACCTTGCAAATTATGAG 59.352 40.000 0.00 0.00 0.00 2.90
5580 5732 5.565509 TGGAGTGTACCTTGCAAATTATGA 58.434 37.500 0.00 0.00 0.00 2.15
5581 5733 5.895636 TGGAGTGTACCTTGCAAATTATG 57.104 39.130 0.00 0.00 0.00 1.90
5582 5734 6.245408 TCTTGGAGTGTACCTTGCAAATTAT 58.755 36.000 0.00 0.00 0.00 1.28
5583 5735 5.626142 TCTTGGAGTGTACCTTGCAAATTA 58.374 37.500 0.00 0.00 0.00 1.40
5584 5736 4.469657 TCTTGGAGTGTACCTTGCAAATT 58.530 39.130 0.00 0.00 0.00 1.82
5585 5737 4.074970 CTCTTGGAGTGTACCTTGCAAAT 58.925 43.478 0.00 0.00 0.00 2.32
5586 5738 3.476552 CTCTTGGAGTGTACCTTGCAAA 58.523 45.455 0.00 0.00 0.00 3.68
5587 5739 2.224523 CCTCTTGGAGTGTACCTTGCAA 60.225 50.000 0.00 0.00 34.57 4.08
5588 5740 1.347707 CCTCTTGGAGTGTACCTTGCA 59.652 52.381 0.00 0.00 34.57 4.08
5589 5741 1.339151 CCCTCTTGGAGTGTACCTTGC 60.339 57.143 0.00 0.00 35.39 4.01
5590 5742 2.257207 TCCCTCTTGGAGTGTACCTTG 58.743 52.381 0.00 0.00 38.61 3.61
5591 5743 2.715763 TCCCTCTTGGAGTGTACCTT 57.284 50.000 0.00 0.00 38.61 3.50
5600 5752 1.204146 CCGGAATTCTCCCTCTTGGA 58.796 55.000 5.23 0.00 42.41 3.53
5601 5753 0.464554 GCCGGAATTCTCCCTCTTGG 60.465 60.000 5.05 0.00 38.71 3.61
5602 5754 0.253044 TGCCGGAATTCTCCCTCTTG 59.747 55.000 5.05 0.00 38.71 3.02
5603 5755 0.543749 CTGCCGGAATTCTCCCTCTT 59.456 55.000 5.05 0.00 38.71 2.85
5604 5756 1.977293 GCTGCCGGAATTCTCCCTCT 61.977 60.000 5.05 0.00 38.71 3.69
5605 5757 1.524849 GCTGCCGGAATTCTCCCTC 60.525 63.158 5.05 0.00 38.71 4.30
5606 5758 1.997874 AGCTGCCGGAATTCTCCCT 60.998 57.895 5.05 0.00 38.71 4.20
5607 5759 1.821332 CAGCTGCCGGAATTCTCCC 60.821 63.158 5.05 0.00 38.71 4.30
5608 5760 1.821332 CCAGCTGCCGGAATTCTCC 60.821 63.158 5.05 0.00 38.52 3.71
5609 5761 0.392998 TTCCAGCTGCCGGAATTCTC 60.393 55.000 13.18 0.00 37.62 2.87
5610 5762 0.038166 TTTCCAGCTGCCGGAATTCT 59.962 50.000 17.47 0.00 42.07 2.40
5611 5763 1.066152 GATTTCCAGCTGCCGGAATTC 59.934 52.381 17.47 18.04 42.07 2.17
5612 5764 1.106285 GATTTCCAGCTGCCGGAATT 58.894 50.000 17.47 13.95 42.07 2.17
5613 5765 0.257039 AGATTTCCAGCTGCCGGAAT 59.743 50.000 17.47 8.39 42.07 3.01
5614 5766 0.677731 CAGATTTCCAGCTGCCGGAA 60.678 55.000 13.18 13.18 40.81 4.30
5615 5767 1.078214 CAGATTTCCAGCTGCCGGA 60.078 57.895 5.05 0.00 0.00 5.14
5616 5768 2.117156 CCAGATTTCCAGCTGCCGG 61.117 63.158 8.66 0.00 0.00 6.13
5617 5769 1.078214 TCCAGATTTCCAGCTGCCG 60.078 57.895 8.66 0.00 0.00 5.69
5618 5770 1.034292 GGTCCAGATTTCCAGCTGCC 61.034 60.000 8.66 0.00 0.00 4.85
5619 5771 0.034670 AGGTCCAGATTTCCAGCTGC 60.035 55.000 8.66 0.00 0.00 5.25
5620 5772 1.280133 TCAGGTCCAGATTTCCAGCTG 59.720 52.381 6.78 6.78 36.01 4.24
5621 5773 1.661463 TCAGGTCCAGATTTCCAGCT 58.339 50.000 0.00 0.00 0.00 4.24
5622 5774 2.496899 TTCAGGTCCAGATTTCCAGC 57.503 50.000 0.00 0.00 0.00 4.85
5623 5775 4.321527 GCTTTTTCAGGTCCAGATTTCCAG 60.322 45.833 0.00 0.00 0.00 3.86
5624 5776 3.573967 GCTTTTTCAGGTCCAGATTTCCA 59.426 43.478 0.00 0.00 0.00 3.53
5625 5777 3.829026 AGCTTTTTCAGGTCCAGATTTCC 59.171 43.478 0.00 0.00 0.00 3.13
5626 5778 5.390991 CGTAGCTTTTTCAGGTCCAGATTTC 60.391 44.000 0.00 0.00 34.13 2.17
5627 5779 4.455877 CGTAGCTTTTTCAGGTCCAGATTT 59.544 41.667 0.00 0.00 34.13 2.17
5628 5780 4.003648 CGTAGCTTTTTCAGGTCCAGATT 58.996 43.478 0.00 0.00 34.13 2.40
5629 5781 3.008049 ACGTAGCTTTTTCAGGTCCAGAT 59.992 43.478 0.00 0.00 34.13 2.90
5630 5782 2.367567 ACGTAGCTTTTTCAGGTCCAGA 59.632 45.455 0.00 0.00 34.13 3.86
5631 5783 2.737252 GACGTAGCTTTTTCAGGTCCAG 59.263 50.000 0.00 0.00 34.13 3.86
5632 5784 2.103432 TGACGTAGCTTTTTCAGGTCCA 59.897 45.455 0.00 0.00 34.13 4.02
5633 5785 2.737252 CTGACGTAGCTTTTTCAGGTCC 59.263 50.000 0.00 0.00 34.13 4.46
5634 5786 2.737252 CCTGACGTAGCTTTTTCAGGTC 59.263 50.000 21.13 12.19 46.94 3.85
5635 5787 2.767505 CCTGACGTAGCTTTTTCAGGT 58.232 47.619 21.13 4.18 46.94 4.00
5637 5789 1.464997 GGCCTGACGTAGCTTTTTCAG 59.535 52.381 0.00 9.95 36.10 3.02
5638 5790 1.202710 TGGCCTGACGTAGCTTTTTCA 60.203 47.619 3.32 0.00 0.00 2.69
5639 5791 1.197036 GTGGCCTGACGTAGCTTTTTC 59.803 52.381 3.32 0.00 0.00 2.29
5640 5792 1.235724 GTGGCCTGACGTAGCTTTTT 58.764 50.000 3.32 0.00 0.00 1.94
5641 5793 0.605589 GGTGGCCTGACGTAGCTTTT 60.606 55.000 3.32 0.00 0.00 2.27
5642 5794 1.003718 GGTGGCCTGACGTAGCTTT 60.004 57.895 3.32 0.00 0.00 3.51
5643 5795 0.613853 TAGGTGGCCTGACGTAGCTT 60.614 55.000 3.32 0.00 34.61 3.74
5644 5796 0.397254 ATAGGTGGCCTGACGTAGCT 60.397 55.000 3.32 0.00 34.61 3.32
5645 5797 0.464452 AATAGGTGGCCTGACGTAGC 59.536 55.000 3.32 0.00 34.61 3.58
5646 5798 2.032620 AGAATAGGTGGCCTGACGTAG 58.967 52.381 3.32 0.00 34.61 3.51
5647 5799 1.754803 CAGAATAGGTGGCCTGACGTA 59.245 52.381 3.32 0.56 34.61 3.57
5648 5800 0.537188 CAGAATAGGTGGCCTGACGT 59.463 55.000 3.32 0.00 34.61 4.34
5649 5801 0.811616 GCAGAATAGGTGGCCTGACG 60.812 60.000 3.32 0.00 34.61 4.35
5650 5802 0.253044 TGCAGAATAGGTGGCCTGAC 59.747 55.000 3.32 0.00 34.61 3.51
5651 5803 0.253044 GTGCAGAATAGGTGGCCTGA 59.747 55.000 3.32 0.00 34.61 3.86
5652 5804 0.035152 TGTGCAGAATAGGTGGCCTG 60.035 55.000 3.32 0.00 34.61 4.85
5653 5805 0.698238 TTGTGCAGAATAGGTGGCCT 59.302 50.000 3.32 0.00 37.71 5.19
5654 5806 0.811281 GTTGTGCAGAATAGGTGGCC 59.189 55.000 0.00 0.00 0.00 5.36
5655 5807 1.740025 GAGTTGTGCAGAATAGGTGGC 59.260 52.381 0.00 0.00 0.00 5.01
5656 5808 2.290260 TGGAGTTGTGCAGAATAGGTGG 60.290 50.000 0.00 0.00 0.00 4.61
5657 5809 3.057969 TGGAGTTGTGCAGAATAGGTG 57.942 47.619 0.00 0.00 0.00 4.00
5658 5810 3.788227 TTGGAGTTGTGCAGAATAGGT 57.212 42.857 0.00 0.00 0.00 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.