Multiple sequence alignment - TraesCS2A01G082300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G082300 chr2A 100.000 2660 0 0 1 2660 37201144 37198485 0.000000e+00 4913.0
1 TraesCS2A01G082300 chr2A 78.884 251 49 4 1374 1624 37099892 37099646 1.640000e-37 167.0
2 TraesCS2A01G082300 chr2D 89.538 1300 69 31 554 1819 34263796 34262530 0.000000e+00 1585.0
3 TraesCS2A01G082300 chr2D 93.458 535 35 0 1 535 34264319 34263785 0.000000e+00 795.0
4 TraesCS2A01G082300 chr2D 83.368 475 65 5 1 462 130995626 130995153 6.800000e-116 427.0
5 TraesCS2A01G082300 chr2B 88.738 1181 91 27 655 1817 56715571 56714415 0.000000e+00 1406.0
6 TraesCS2A01G082300 chr2B 88.718 1170 91 26 665 1817 56685662 56684517 0.000000e+00 1391.0
7 TraesCS2A01G082300 chr2B 92.723 426 29 2 231 655 56716998 56716574 4.870000e-172 614.0
8 TraesCS2A01G082300 chr2B 92.037 427 30 4 231 655 56687100 56686676 4.900000e-167 597.0
9 TraesCS2A01G082300 chr3D 95.626 503 20 2 2158 2660 38295347 38295847 0.000000e+00 806.0
10 TraesCS2A01G082300 chr3D 94.320 493 28 0 2168 2660 577339426 577338934 0.000000e+00 756.0
11 TraesCS2A01G082300 chr3D 93.915 493 30 0 2168 2660 22264563 22264071 0.000000e+00 745.0
12 TraesCS2A01G082300 chr5D 95.749 494 21 0 2167 2660 553816411 553816904 0.000000e+00 797.0
13 TraesCS2A01G082300 chr5D 95.538 493 22 0 2168 2660 47671963 47671471 0.000000e+00 789.0
14 TraesCS2A01G082300 chr5D 93.373 498 33 0 2163 2660 50709420 50708923 0.000000e+00 737.0
15 TraesCS2A01G082300 chr7D 94.737 494 26 0 2167 2660 598145948 598145455 0.000000e+00 769.0
16 TraesCS2A01G082300 chr7D 93.200 500 34 0 2161 2660 379247565 379248064 0.000000e+00 736.0
17 TraesCS2A01G082300 chr7D 93.535 495 30 1 2168 2660 543914594 543914100 0.000000e+00 736.0
18 TraesCS2A01G082300 chr7D 84.861 469 59 4 1 458 623834043 623834510 1.870000e-126 462.0
19 TraesCS2A01G082300 chr7D 82.278 474 69 8 1 462 175636999 175637469 1.920000e-106 396.0
20 TraesCS2A01G082300 chrUn 91.358 567 29 12 1261 1817 334252156 334251600 0.000000e+00 758.0
21 TraesCS2A01G082300 chrUn 87.310 591 59 13 665 1248 203985474 203984893 0.000000e+00 662.0
22 TraesCS2A01G082300 chrUn 92.037 427 30 4 231 655 347728419 347727995 4.900000e-167 597.0
23 TraesCS2A01G082300 chr7B 82.316 475 73 6 1 464 721532984 721533458 4.120000e-108 401.0
24 TraesCS2A01G082300 chr7B 82.303 469 72 6 1 458 721714434 721714902 1.920000e-106 396.0
25 TraesCS2A01G082300 chr7B 81.895 475 75 5 1 464 721613052 721613526 8.930000e-105 390.0
26 TraesCS2A01G082300 chr4D 81.379 435 65 11 1 423 84791141 84790711 9.120000e-90 340.0
27 TraesCS2A01G082300 chr4D 85.000 60 7 2 1491 1549 82738464 82738406 2.860000e-05 60.2
28 TraesCS2A01G082300 chr4B 86.885 61 4 4 1491 1549 117083126 117083068 6.150000e-07 65.8
29 TraesCS2A01G082300 chr4A 84.746 59 9 0 1491 1549 494045074 494045016 2.860000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G082300 chr2A 37198485 37201144 2659 True 4913 4913 100.0000 1 2660 1 chr2A.!!$R2 2659
1 TraesCS2A01G082300 chr2D 34262530 34264319 1789 True 1190 1585 91.4980 1 1819 2 chr2D.!!$R2 1818
2 TraesCS2A01G082300 chr2B 56714415 56716998 2583 True 1010 1406 90.7305 231 1817 2 chr2B.!!$R2 1586
3 TraesCS2A01G082300 chr2B 56684517 56687100 2583 True 994 1391 90.3775 231 1817 2 chr2B.!!$R1 1586
4 TraesCS2A01G082300 chr3D 38295347 38295847 500 False 806 806 95.6260 2158 2660 1 chr3D.!!$F1 502
5 TraesCS2A01G082300 chrUn 334251600 334252156 556 True 758 758 91.3580 1261 1817 1 chrUn.!!$R2 556
6 TraesCS2A01G082300 chrUn 203984893 203985474 581 True 662 662 87.3100 665 1248 1 chrUn.!!$R1 583

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
777 1788 0.602905 GGTGCCGGTGCTGGATATAC 60.603 60.0 1.9 0.0 38.71 1.47 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1836 2900 0.031449 AATTGCGGGTTTGTCGTTGG 59.969 50.0 0.0 0.0 0.0 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.244911 GGGAGAGGTTGATGTTGGAGAAA 60.245 47.826 0.00 0.00 0.00 2.52
48 49 6.070824 AGGTTGATGTTGGAGAAAAACAAAGT 60.071 34.615 0.00 0.00 40.69 2.66
103 104 2.555757 GGAGCTTGAGCAAATTGTGACT 59.444 45.455 5.70 0.00 45.16 3.41
117 118 1.140652 TGTGACTGTGCATGGTCTTGA 59.859 47.619 18.25 1.61 34.01 3.02
134 135 0.814457 TGAGCTCGAGAAAGAGAGGC 59.186 55.000 18.75 0.00 40.57 4.70
153 154 3.490890 GCGGCTTGCGAAAGAGAT 58.509 55.556 7.54 0.00 0.00 2.75
154 155 1.061570 GCGGCTTGCGAAAGAGATG 59.938 57.895 7.54 0.00 0.00 2.90
155 156 1.717937 CGGCTTGCGAAAGAGATGG 59.282 57.895 7.54 0.00 0.00 3.51
194 195 1.271543 TGCAGGACATCAACCTCTTGG 60.272 52.381 0.00 0.00 35.35 3.61
205 206 2.011122 ACCTCTTGGACGAGAAAGGA 57.989 50.000 0.00 0.00 37.04 3.36
216 217 3.729966 ACGAGAAAGGAAAGAAGTGGTC 58.270 45.455 0.00 0.00 0.00 4.02
265 266 1.363744 GCGAGGAGTGAAGTCATTGG 58.636 55.000 0.00 0.00 0.00 3.16
332 333 5.190677 GGCATGTACTACACTTATTTGGGT 58.809 41.667 0.00 0.00 0.00 4.51
345 346 9.227777 ACACTTATTTGGGTTACACTATCTTTC 57.772 33.333 0.00 0.00 0.00 2.62
377 378 7.576861 ATGATGAATTTGCACTGTATGATCA 57.423 32.000 0.00 0.00 0.00 2.92
380 381 7.283580 TGATGAATTTGCACTGTATGATCATCA 59.716 33.333 12.53 9.29 37.37 3.07
387 388 4.053295 CACTGTATGATCATCATGCGTGA 58.947 43.478 23.36 11.83 41.50 4.35
419 420 5.779260 TGAATTTGGATGTTGAGATTTGGGA 59.221 36.000 0.00 0.00 0.00 4.37
625 628 9.929722 GGTTCACAAAATTTAGGAAAAATTCAC 57.070 29.630 0.00 0.00 0.00 3.18
662 1670 7.905031 TTTAAAAAGCGGCAAATGAAAAATG 57.095 28.000 1.45 0.00 0.00 2.32
663 1671 4.486574 AAAAGCGGCAAATGAAAAATGG 57.513 36.364 1.45 0.00 0.00 3.16
688 1696 1.578583 AGTGAAAACTGACGGAACCG 58.421 50.000 11.83 11.83 46.03 4.44
720 1728 5.263185 ACGATGAAACACGAAAAACAGAAG 58.737 37.500 0.00 0.00 0.00 2.85
777 1788 0.602905 GGTGCCGGTGCTGGATATAC 60.603 60.000 1.90 0.00 38.71 1.47
846 1877 4.347000 AGCTAAATAGGAATCGGCCTAACA 59.653 41.667 0.00 0.00 43.39 2.41
969 2020 4.469945 TCTGACGGGGATTTCATACTTCTT 59.530 41.667 0.00 0.00 0.00 2.52
971 2022 5.566469 TGACGGGGATTTCATACTTCTTTT 58.434 37.500 0.00 0.00 0.00 2.27
1018 2073 1.202463 AGATGATGGCGTCTTTCTCGG 60.202 52.381 8.40 0.00 37.05 4.63
1041 2096 1.923204 CTGTGCGCTCTTGTCATACTC 59.077 52.381 9.73 0.00 0.00 2.59
1193 2248 0.583438 CCTGCAGGTAATTCGCATCG 59.417 55.000 25.53 0.00 34.63 3.84
1196 2251 3.317150 CTGCAGGTAATTCGCATCGATA 58.683 45.455 5.57 0.00 35.23 2.92
1199 2254 4.388773 TGCAGGTAATTCGCATCGATATTC 59.611 41.667 0.00 0.00 35.23 1.75
1220 2275 3.004862 CCATGCAAAGAAAAAGCATCCC 58.995 45.455 0.00 0.00 46.39 3.85
1229 2284 4.006319 AGAAAAAGCATCCCTCTTCTTCG 58.994 43.478 0.00 0.00 28.69 3.79
1230 2285 1.743996 AAAGCATCCCTCTTCTTCGC 58.256 50.000 0.00 0.00 0.00 4.70
1231 2286 0.460987 AAGCATCCCTCTTCTTCGCG 60.461 55.000 0.00 0.00 0.00 5.87
1241 2296 0.506932 CTTCTTCGCGCGAGTTTCAA 59.493 50.000 32.74 16.17 0.00 2.69
1246 2301 2.712132 TCGCGCGAGTTTCAATTATG 57.288 45.000 31.40 0.00 0.00 1.90
1247 2302 1.104579 CGCGCGAGTTTCAATTATGC 58.895 50.000 28.94 0.00 0.00 3.14
1248 2303 1.466855 GCGCGAGTTTCAATTATGCC 58.533 50.000 12.10 0.00 0.00 4.40
1249 2304 1.064060 GCGCGAGTTTCAATTATGCCT 59.936 47.619 12.10 0.00 0.00 4.75
1250 2305 2.851008 GCGCGAGTTTCAATTATGCCTC 60.851 50.000 12.10 0.00 0.00 4.70
1258 2313 1.134431 TCAATTATGCCTCGCTCAGCA 60.134 47.619 0.00 0.00 44.45 4.41
1259 2314 1.003116 CAATTATGCCTCGCTCAGCAC 60.003 52.381 0.00 0.00 42.84 4.40
1575 2633 1.517257 GGCTGACGACACCATCTCG 60.517 63.158 0.00 0.00 37.17 4.04
1597 2655 2.346884 GAGTACGCCAACTCGTTCG 58.653 57.895 0.00 0.00 43.15 3.95
1662 2720 1.375098 CCGACACCTCCGACTAGTCC 61.375 65.000 17.23 0.00 0.00 3.85
1708 2772 3.389741 TCGAGTTTCGACGCTTACC 57.610 52.632 0.00 0.00 44.82 2.85
1725 2789 4.503370 GCTTACCGTAGTATGCAGAAGTTC 59.497 45.833 0.00 0.00 44.82 3.01
1726 2790 5.679127 GCTTACCGTAGTATGCAGAAGTTCT 60.679 44.000 0.00 0.00 44.82 3.01
1729 2793 6.466885 ACCGTAGTATGCAGAAGTTCTTAT 57.533 37.500 1.56 3.79 0.00 1.73
1731 2795 6.757010 ACCGTAGTATGCAGAAGTTCTTATTG 59.243 38.462 1.56 0.00 0.00 1.90
1732 2796 6.757010 CCGTAGTATGCAGAAGTTCTTATTGT 59.243 38.462 1.56 0.00 0.00 2.71
1733 2797 7.919091 CCGTAGTATGCAGAAGTTCTTATTGTA 59.081 37.037 1.56 0.00 0.00 2.41
1737 2801 7.770433 AGTATGCAGAAGTTCTTATTGTATGCA 59.230 33.333 12.70 12.70 44.31 3.96
1738 2802 6.426980 TGCAGAAGTTCTTATTGTATGCAG 57.573 37.500 1.56 0.00 36.33 4.41
1739 2803 6.172630 TGCAGAAGTTCTTATTGTATGCAGA 58.827 36.000 1.56 0.00 36.33 4.26
1740 2804 6.654582 TGCAGAAGTTCTTATTGTATGCAGAA 59.345 34.615 1.56 0.00 36.33 3.02
1741 2805 7.148356 TGCAGAAGTTCTTATTGTATGCAGAAG 60.148 37.037 1.56 2.36 36.33 2.85
1755 2819 8.301252 TGTATGCAGAAGTTAGTAGTATGGAA 57.699 34.615 0.00 0.00 0.00 3.53
1757 2821 7.661536 ATGCAGAAGTTAGTAGTATGGAAGA 57.338 36.000 0.00 0.00 0.00 2.87
1832 2896 4.829872 AAACACGACATACTATTCCCCA 57.170 40.909 0.00 0.00 0.00 4.96
1833 2897 5.367945 AAACACGACATACTATTCCCCAT 57.632 39.130 0.00 0.00 0.00 4.00
1834 2898 4.336889 ACACGACATACTATTCCCCATG 57.663 45.455 0.00 0.00 0.00 3.66
1835 2899 3.709653 ACACGACATACTATTCCCCATGT 59.290 43.478 0.00 0.00 34.41 3.21
1836 2900 4.202223 ACACGACATACTATTCCCCATGTC 60.202 45.833 0.00 3.95 42.40 3.06
1837 2901 3.323979 ACGACATACTATTCCCCATGTCC 59.676 47.826 7.71 0.00 42.70 4.02
1838 2902 3.323691 CGACATACTATTCCCCATGTCCA 59.676 47.826 7.71 0.00 42.70 4.02
1839 2903 4.202315 CGACATACTATTCCCCATGTCCAA 60.202 45.833 7.71 0.00 42.70 3.53
1840 2904 5.048846 ACATACTATTCCCCATGTCCAAC 57.951 43.478 0.00 0.00 0.00 3.77
1841 2905 2.710096 ACTATTCCCCATGTCCAACG 57.290 50.000 0.00 0.00 0.00 4.10
1842 2906 2.193127 ACTATTCCCCATGTCCAACGA 58.807 47.619 0.00 0.00 0.00 3.85
1843 2907 2.093128 ACTATTCCCCATGTCCAACGAC 60.093 50.000 0.00 0.00 39.66 4.34
1850 2914 4.128139 TGTCCAACGACAAACCCG 57.872 55.556 0.00 0.00 46.09 5.28
1851 2915 2.181521 TGTCCAACGACAAACCCGC 61.182 57.895 0.00 0.00 46.09 6.13
1852 2916 2.181521 GTCCAACGACAAACCCGCA 61.182 57.895 0.00 0.00 38.99 5.69
1853 2917 1.451567 TCCAACGACAAACCCGCAA 60.452 52.632 0.00 0.00 0.00 4.85
1854 2918 0.820074 TCCAACGACAAACCCGCAAT 60.820 50.000 0.00 0.00 0.00 3.56
1855 2919 0.031449 CCAACGACAAACCCGCAATT 59.969 50.000 0.00 0.00 0.00 2.32
1856 2920 1.537135 CCAACGACAAACCCGCAATTT 60.537 47.619 0.00 0.00 0.00 1.82
1857 2921 1.520590 CAACGACAAACCCGCAATTTG 59.479 47.619 0.00 3.46 41.81 2.32
1858 2922 0.596341 ACGACAAACCCGCAATTTGC 60.596 50.000 11.42 11.42 40.10 3.68
1859 2923 1.281566 CGACAAACCCGCAATTTGCC 61.282 55.000 15.45 0.00 41.12 4.52
1860 2924 0.249657 GACAAACCCGCAATTTGCCA 60.250 50.000 15.45 0.00 41.12 4.92
1861 2925 0.531753 ACAAACCCGCAATTTGCCAC 60.532 50.000 15.45 0.00 41.12 5.01
1862 2926 0.249826 CAAACCCGCAATTTGCCACT 60.250 50.000 15.45 0.00 41.12 4.00
1863 2927 0.467804 AAACCCGCAATTTGCCACTT 59.532 45.000 15.45 1.59 41.12 3.16
1864 2928 0.033366 AACCCGCAATTTGCCACTTC 59.967 50.000 15.45 0.00 41.12 3.01
1865 2929 1.112315 ACCCGCAATTTGCCACTTCA 61.112 50.000 15.45 0.00 41.12 3.02
1866 2930 0.033228 CCCGCAATTTGCCACTTCAA 59.967 50.000 15.45 0.00 41.12 2.69
1867 2931 1.139163 CCGCAATTTGCCACTTCAAC 58.861 50.000 15.45 0.00 41.12 3.18
1868 2932 0.777631 CGCAATTTGCCACTTCAACG 59.222 50.000 15.45 0.00 41.12 4.10
1869 2933 1.139163 GCAATTTGCCACTTCAACGG 58.861 50.000 10.34 0.00 37.42 4.44
1870 2934 1.782044 CAATTTGCCACTTCAACGGG 58.218 50.000 0.00 0.00 0.00 5.28
1871 2935 1.068434 CAATTTGCCACTTCAACGGGT 59.932 47.619 0.00 0.00 0.00 5.28
1872 2936 1.408969 ATTTGCCACTTCAACGGGTT 58.591 45.000 0.00 0.00 0.00 4.11
1873 2937 0.741915 TTTGCCACTTCAACGGGTTC 59.258 50.000 0.00 0.00 0.00 3.62
1874 2938 0.394488 TTGCCACTTCAACGGGTTCA 60.394 50.000 0.00 0.00 0.00 3.18
1875 2939 0.817634 TGCCACTTCAACGGGTTCAG 60.818 55.000 0.00 0.00 0.00 3.02
1876 2940 1.949257 CCACTTCAACGGGTTCAGC 59.051 57.895 0.00 0.00 0.00 4.26
1877 2941 0.535102 CCACTTCAACGGGTTCAGCT 60.535 55.000 0.00 0.00 0.00 4.24
1878 2942 1.308998 CACTTCAACGGGTTCAGCTT 58.691 50.000 0.00 0.00 0.00 3.74
1879 2943 1.002468 CACTTCAACGGGTTCAGCTTG 60.002 52.381 0.00 0.00 0.00 4.01
1880 2944 1.134220 ACTTCAACGGGTTCAGCTTGA 60.134 47.619 0.00 0.00 0.00 3.02
1881 2945 1.532868 CTTCAACGGGTTCAGCTTGAG 59.467 52.381 0.00 0.00 0.00 3.02
1882 2946 0.468226 TCAACGGGTTCAGCTTGAGT 59.532 50.000 0.00 0.00 0.00 3.41
1883 2947 0.588252 CAACGGGTTCAGCTTGAGTG 59.412 55.000 0.00 0.00 0.00 3.51
1884 2948 1.166531 AACGGGTTCAGCTTGAGTGC 61.167 55.000 0.00 0.00 0.00 4.40
1885 2949 1.597854 CGGGTTCAGCTTGAGTGCA 60.598 57.895 0.00 0.00 34.99 4.57
1886 2950 0.957395 CGGGTTCAGCTTGAGTGCAT 60.957 55.000 0.00 0.00 34.99 3.96
1887 2951 0.524862 GGGTTCAGCTTGAGTGCATG 59.475 55.000 0.00 0.00 34.99 4.06
1888 2952 1.242076 GGTTCAGCTTGAGTGCATGT 58.758 50.000 0.00 0.00 34.99 3.21
1889 2953 1.610522 GGTTCAGCTTGAGTGCATGTT 59.389 47.619 0.00 0.00 34.99 2.71
1890 2954 2.606308 GGTTCAGCTTGAGTGCATGTTG 60.606 50.000 0.00 0.00 33.56 3.33
1891 2955 0.594602 TCAGCTTGAGTGCATGTTGC 59.405 50.000 0.00 0.00 45.29 4.17
1907 2971 3.234596 GTTGCATTAGGCGACGAATAC 57.765 47.619 0.00 0.00 46.48 1.89
1908 2972 2.347292 GTTGCATTAGGCGACGAATACG 60.347 50.000 0.00 0.00 46.48 3.06
1909 2973 1.762419 GCATTAGGCGACGAATACGA 58.238 50.000 0.00 0.00 42.66 3.43
1910 2974 2.325761 GCATTAGGCGACGAATACGAT 58.674 47.619 0.00 0.00 42.66 3.73
1911 2975 2.729882 GCATTAGGCGACGAATACGATT 59.270 45.455 0.00 0.00 42.66 3.34
1912 2976 3.181543 GCATTAGGCGACGAATACGATTC 60.182 47.826 0.00 0.00 42.66 2.52
1913 2977 3.976793 TTAGGCGACGAATACGATTCT 57.023 42.857 0.00 0.00 42.66 2.40
1914 2978 2.121116 AGGCGACGAATACGATTCTG 57.879 50.000 0.00 0.00 42.66 3.02
1915 2979 1.674441 AGGCGACGAATACGATTCTGA 59.326 47.619 0.00 0.00 42.66 3.27
1916 2980 2.044860 GGCGACGAATACGATTCTGAG 58.955 52.381 0.00 0.00 42.66 3.35
1917 2981 2.044860 GCGACGAATACGATTCTGAGG 58.955 52.381 0.00 0.00 42.66 3.86
1918 2982 2.541178 GCGACGAATACGATTCTGAGGT 60.541 50.000 0.00 0.00 42.66 3.85
1919 2983 3.036633 CGACGAATACGATTCTGAGGTG 58.963 50.000 0.00 0.00 42.66 4.00
1920 2984 3.487042 CGACGAATACGATTCTGAGGTGT 60.487 47.826 0.00 0.00 42.66 4.16
1921 2985 4.421948 GACGAATACGATTCTGAGGTGTT 58.578 43.478 0.00 0.00 42.66 3.32
1922 2986 4.174009 ACGAATACGATTCTGAGGTGTTG 58.826 43.478 0.00 0.00 42.66 3.33
1923 2987 4.082408 ACGAATACGATTCTGAGGTGTTGA 60.082 41.667 0.00 0.00 42.66 3.18
1924 2988 4.862574 CGAATACGATTCTGAGGTGTTGAA 59.137 41.667 0.00 0.00 42.66 2.69
1925 2989 5.004821 CGAATACGATTCTGAGGTGTTGAAG 59.995 44.000 0.00 0.00 42.66 3.02
1926 2990 5.661056 ATACGATTCTGAGGTGTTGAAGA 57.339 39.130 0.00 0.00 0.00 2.87
1927 2991 4.543590 ACGATTCTGAGGTGTTGAAGAT 57.456 40.909 0.00 0.00 0.00 2.40
1928 2992 4.248859 ACGATTCTGAGGTGTTGAAGATG 58.751 43.478 0.00 0.00 0.00 2.90
1929 2993 4.248859 CGATTCTGAGGTGTTGAAGATGT 58.751 43.478 0.00 0.00 0.00 3.06
1930 2994 4.692625 CGATTCTGAGGTGTTGAAGATGTT 59.307 41.667 0.00 0.00 0.00 2.71
1931 2995 5.869344 CGATTCTGAGGTGTTGAAGATGTTA 59.131 40.000 0.00 0.00 0.00 2.41
1932 2996 6.536582 CGATTCTGAGGTGTTGAAGATGTTAT 59.463 38.462 0.00 0.00 0.00 1.89
1933 2997 7.065085 CGATTCTGAGGTGTTGAAGATGTTATT 59.935 37.037 0.00 0.00 0.00 1.40
1934 2998 7.672983 TTCTGAGGTGTTGAAGATGTTATTC 57.327 36.000 0.00 0.00 0.00 1.75
1935 2999 6.768483 TCTGAGGTGTTGAAGATGTTATTCA 58.232 36.000 0.00 0.00 34.93 2.57
1936 3000 7.397221 TCTGAGGTGTTGAAGATGTTATTCAT 58.603 34.615 0.00 0.00 36.60 2.57
1937 3001 8.539544 TCTGAGGTGTTGAAGATGTTATTCATA 58.460 33.333 0.00 0.00 36.60 2.15
1938 3002 8.722480 TGAGGTGTTGAAGATGTTATTCATAG 57.278 34.615 0.00 0.00 36.60 2.23
1939 3003 7.770433 TGAGGTGTTGAAGATGTTATTCATAGG 59.230 37.037 0.00 0.00 36.60 2.57
1940 3004 7.861629 AGGTGTTGAAGATGTTATTCATAGGA 58.138 34.615 0.00 0.00 36.60 2.94
1941 3005 8.497745 AGGTGTTGAAGATGTTATTCATAGGAT 58.502 33.333 0.00 0.00 36.60 3.24
1942 3006 9.778741 GGTGTTGAAGATGTTATTCATAGGATA 57.221 33.333 0.00 0.00 36.60 2.59
1944 3008 9.778741 TGTTGAAGATGTTATTCATAGGATACC 57.221 33.333 0.00 0.00 36.60 2.73
1945 3009 9.778741 GTTGAAGATGTTATTCATAGGATACCA 57.221 33.333 0.00 0.00 36.60 3.25
1946 3010 9.778741 TTGAAGATGTTATTCATAGGATACCAC 57.221 33.333 0.00 0.00 36.60 4.16
1947 3011 8.375506 TGAAGATGTTATTCATAGGATACCACC 58.624 37.037 0.00 0.00 36.83 4.61
1948 3012 8.511748 AAGATGTTATTCATAGGATACCACCT 57.488 34.615 0.00 0.00 43.32 4.00
1949 3013 8.511748 AGATGTTATTCATAGGATACCACCTT 57.488 34.615 0.00 0.00 41.00 3.50
1950 3014 8.949421 AGATGTTATTCATAGGATACCACCTTT 58.051 33.333 0.00 0.00 41.00 3.11
1953 3017 8.994500 TGTTATTCATAGGATACCACCTTTACA 58.006 33.333 0.00 0.00 41.00 2.41
1954 3018 9.841295 GTTATTCATAGGATACCACCTTTACAA 57.159 33.333 0.00 0.00 41.00 2.41
1956 3020 7.743116 TTCATAGGATACCACCTTTACAAGA 57.257 36.000 0.00 0.00 41.00 3.02
1957 3021 7.361457 TCATAGGATACCACCTTTACAAGAG 57.639 40.000 0.00 0.00 41.00 2.85
1958 3022 7.130099 TCATAGGATACCACCTTTACAAGAGA 58.870 38.462 0.00 0.00 41.00 3.10
1959 3023 7.789831 TCATAGGATACCACCTTTACAAGAGAT 59.210 37.037 0.00 0.00 41.00 2.75
1960 3024 6.487299 AGGATACCACCTTTACAAGAGATC 57.513 41.667 0.00 0.00 36.86 2.75
1961 3025 5.964477 AGGATACCACCTTTACAAGAGATCA 59.036 40.000 0.00 0.00 36.86 2.92
1962 3026 6.617371 AGGATACCACCTTTACAAGAGATCAT 59.383 38.462 0.00 0.00 36.86 2.45
1963 3027 6.931840 GGATACCACCTTTACAAGAGATCATC 59.068 42.308 0.00 0.00 0.00 2.92
1964 3028 7.202047 GGATACCACCTTTACAAGAGATCATCT 60.202 40.741 0.00 0.00 41.27 2.90
1965 3029 8.783660 ATACCACCTTTACAAGAGATCATCTA 57.216 34.615 0.00 0.00 37.23 1.98
1966 3030 6.879400 ACCACCTTTACAAGAGATCATCTAC 58.121 40.000 0.00 0.00 37.23 2.59
1967 3031 6.440647 ACCACCTTTACAAGAGATCATCTACA 59.559 38.462 0.00 0.00 37.23 2.74
1968 3032 7.126421 ACCACCTTTACAAGAGATCATCTACAT 59.874 37.037 0.00 0.00 37.23 2.29
1969 3033 8.642432 CCACCTTTACAAGAGATCATCTACATA 58.358 37.037 0.00 0.00 37.23 2.29
1970 3034 9.689976 CACCTTTACAAGAGATCATCTACATAG 57.310 37.037 0.00 0.00 37.23 2.23
1971 3035 8.364142 ACCTTTACAAGAGATCATCTACATAGC 58.636 37.037 0.00 0.00 37.23 2.97
1972 3036 8.363390 CCTTTACAAGAGATCATCTACATAGCA 58.637 37.037 0.00 0.00 37.23 3.49
1973 3037 9.190858 CTTTACAAGAGATCATCTACATAGCAC 57.809 37.037 0.00 0.00 37.23 4.40
1974 3038 6.975196 ACAAGAGATCATCTACATAGCACT 57.025 37.500 0.00 0.00 37.23 4.40
1975 3039 6.980593 ACAAGAGATCATCTACATAGCACTC 58.019 40.000 0.00 0.00 37.23 3.51
1976 3040 6.548993 ACAAGAGATCATCTACATAGCACTCA 59.451 38.462 0.00 0.00 37.23 3.41
1977 3041 6.573664 AGAGATCATCTACATAGCACTCAC 57.426 41.667 0.00 0.00 36.10 3.51
1978 3042 6.067350 AGAGATCATCTACATAGCACTCACA 58.933 40.000 0.00 0.00 36.10 3.58
1979 3043 6.548993 AGAGATCATCTACATAGCACTCACAA 59.451 38.462 0.00 0.00 36.10 3.33
1980 3044 7.233144 AGAGATCATCTACATAGCACTCACAAT 59.767 37.037 0.00 0.00 36.10 2.71
1981 3045 7.377398 AGATCATCTACATAGCACTCACAATC 58.623 38.462 0.00 0.00 0.00 2.67
1982 3046 6.721704 TCATCTACATAGCACTCACAATCT 57.278 37.500 0.00 0.00 0.00 2.40
1983 3047 7.117285 TCATCTACATAGCACTCACAATCTT 57.883 36.000 0.00 0.00 0.00 2.40
1984 3048 8.237811 TCATCTACATAGCACTCACAATCTTA 57.762 34.615 0.00 0.00 0.00 2.10
1985 3049 8.864087 TCATCTACATAGCACTCACAATCTTAT 58.136 33.333 0.00 0.00 0.00 1.73
1986 3050 8.923683 CATCTACATAGCACTCACAATCTTATG 58.076 37.037 0.00 0.00 0.00 1.90
1987 3051 8.011844 TCTACATAGCACTCACAATCTTATGT 57.988 34.615 0.00 0.00 0.00 2.29
1988 3052 9.131791 TCTACATAGCACTCACAATCTTATGTA 57.868 33.333 0.00 0.00 30.84 2.29
1989 3053 9.920133 CTACATAGCACTCACAATCTTATGTAT 57.080 33.333 0.00 0.00 30.61 2.29
1995 3059 9.703892 AGCACTCACAATCTTATGTATTATCTC 57.296 33.333 0.00 0.00 30.84 2.75
1996 3060 9.481340 GCACTCACAATCTTATGTATTATCTCA 57.519 33.333 0.00 0.00 30.84 3.27
2017 3081 6.919662 TCTCATTGAAGAAAGTTTTGATGTGC 59.080 34.615 0.00 0.00 0.00 4.57
2018 3082 6.571605 TCATTGAAGAAAGTTTTGATGTGCA 58.428 32.000 0.00 0.00 0.00 4.57
2019 3083 7.211573 TCATTGAAGAAAGTTTTGATGTGCAT 58.788 30.769 0.00 0.00 0.00 3.96
2020 3084 7.383029 TCATTGAAGAAAGTTTTGATGTGCATC 59.617 33.333 5.30 5.30 38.29 3.91
2021 3085 6.395426 TGAAGAAAGTTTTGATGTGCATCT 57.605 33.333 12.64 0.00 38.60 2.90
2022 3086 6.210796 TGAAGAAAGTTTTGATGTGCATCTG 58.789 36.000 12.64 0.00 38.60 2.90
2023 3087 5.779529 AGAAAGTTTTGATGTGCATCTGT 57.220 34.783 12.64 0.00 38.60 3.41
2024 3088 5.526115 AGAAAGTTTTGATGTGCATCTGTG 58.474 37.500 12.64 0.00 38.60 3.66
2025 3089 5.300034 AGAAAGTTTTGATGTGCATCTGTGA 59.700 36.000 12.64 0.00 38.60 3.58
2026 3090 5.717078 AAGTTTTGATGTGCATCTGTGAT 57.283 34.783 12.64 0.00 38.60 3.06
2027 3091 5.055642 AGTTTTGATGTGCATCTGTGATG 57.944 39.130 12.64 3.42 38.60 3.07
2028 3092 4.521639 AGTTTTGATGTGCATCTGTGATGT 59.478 37.500 12.64 0.00 38.60 3.06
2029 3093 4.428615 TTTGATGTGCATCTGTGATGTG 57.571 40.909 12.64 0.00 38.60 3.21
2030 3094 3.062122 TGATGTGCATCTGTGATGTGT 57.938 42.857 12.64 0.00 38.60 3.72
2031 3095 4.205065 TGATGTGCATCTGTGATGTGTA 57.795 40.909 12.64 0.00 38.60 2.90
2032 3096 4.773013 TGATGTGCATCTGTGATGTGTAT 58.227 39.130 12.64 2.21 38.60 2.29
2033 3097 5.187687 TGATGTGCATCTGTGATGTGTATT 58.812 37.500 12.64 0.00 38.60 1.89
2034 3098 4.950434 TGTGCATCTGTGATGTGTATTG 57.050 40.909 8.98 0.00 0.00 1.90
2035 3099 4.325972 TGTGCATCTGTGATGTGTATTGT 58.674 39.130 8.98 0.00 0.00 2.71
2036 3100 4.154556 TGTGCATCTGTGATGTGTATTGTG 59.845 41.667 8.98 0.00 0.00 3.33
2037 3101 3.127376 TGCATCTGTGATGTGTATTGTGC 59.873 43.478 8.98 0.00 0.00 4.57
2038 3102 3.376234 GCATCTGTGATGTGTATTGTGCT 59.624 43.478 8.98 0.00 0.00 4.40
2039 3103 4.142534 GCATCTGTGATGTGTATTGTGCTT 60.143 41.667 8.98 0.00 0.00 3.91
2040 3104 5.329493 CATCTGTGATGTGTATTGTGCTTG 58.671 41.667 0.00 0.00 0.00 4.01
2041 3105 4.388485 TCTGTGATGTGTATTGTGCTTGT 58.612 39.130 0.00 0.00 0.00 3.16
2042 3106 5.546526 TCTGTGATGTGTATTGTGCTTGTA 58.453 37.500 0.00 0.00 0.00 2.41
2043 3107 5.994668 TCTGTGATGTGTATTGTGCTTGTAA 59.005 36.000 0.00 0.00 0.00 2.41
2044 3108 6.654582 TCTGTGATGTGTATTGTGCTTGTAAT 59.345 34.615 0.00 0.00 0.00 1.89
2045 3109 7.174772 TCTGTGATGTGTATTGTGCTTGTAATT 59.825 33.333 0.00 0.00 0.00 1.40
2046 3110 8.329203 TGTGATGTGTATTGTGCTTGTAATTA 57.671 30.769 0.00 0.00 0.00 1.40
2047 3111 8.787852 TGTGATGTGTATTGTGCTTGTAATTAA 58.212 29.630 0.00 0.00 0.00 1.40
2048 3112 9.277565 GTGATGTGTATTGTGCTTGTAATTAAG 57.722 33.333 0.00 0.00 0.00 1.85
2049 3113 8.458052 TGATGTGTATTGTGCTTGTAATTAAGG 58.542 33.333 0.00 0.00 0.00 2.69
2050 3114 6.616947 TGTGTATTGTGCTTGTAATTAAGGC 58.383 36.000 0.00 0.00 0.00 4.35
2051 3115 6.432783 TGTGTATTGTGCTTGTAATTAAGGCT 59.567 34.615 0.00 0.00 0.00 4.58
2052 3116 7.040062 TGTGTATTGTGCTTGTAATTAAGGCTT 60.040 33.333 4.58 4.58 0.00 4.35
2053 3117 7.273381 GTGTATTGTGCTTGTAATTAAGGCTTG 59.727 37.037 10.69 0.00 0.00 4.01
2054 3118 4.782019 TGTGCTTGTAATTAAGGCTTGG 57.218 40.909 10.69 0.00 0.00 3.61
2055 3119 4.402829 TGTGCTTGTAATTAAGGCTTGGA 58.597 39.130 10.69 0.00 0.00 3.53
2056 3120 5.016173 TGTGCTTGTAATTAAGGCTTGGAT 58.984 37.500 10.69 0.82 0.00 3.41
2057 3121 5.125417 TGTGCTTGTAATTAAGGCTTGGATC 59.875 40.000 10.69 0.00 0.00 3.36
2058 3122 4.335315 TGCTTGTAATTAAGGCTTGGATCG 59.665 41.667 10.69 0.00 0.00 3.69
2059 3123 4.574828 GCTTGTAATTAAGGCTTGGATCGA 59.425 41.667 10.69 0.00 0.00 3.59
2060 3124 5.504173 GCTTGTAATTAAGGCTTGGATCGAC 60.504 44.000 10.69 6.72 0.00 4.20
2061 3125 5.092554 TGTAATTAAGGCTTGGATCGACA 57.907 39.130 10.69 8.93 0.00 4.35
2062 3126 5.492895 TGTAATTAAGGCTTGGATCGACAA 58.507 37.500 10.69 0.00 0.00 3.18
2072 3136 4.617253 TTGGATCGACAAGAGAAAGGAA 57.383 40.909 0.00 0.00 0.00 3.36
2073 3137 4.193826 TGGATCGACAAGAGAAAGGAAG 57.806 45.455 0.00 0.00 0.00 3.46
2074 3138 2.933260 GGATCGACAAGAGAAAGGAAGC 59.067 50.000 0.00 0.00 0.00 3.86
2075 3139 3.368948 GGATCGACAAGAGAAAGGAAGCT 60.369 47.826 0.00 0.00 0.00 3.74
2076 3140 3.753294 TCGACAAGAGAAAGGAAGCTT 57.247 42.857 0.00 0.00 0.00 3.74
2077 3141 4.073293 TCGACAAGAGAAAGGAAGCTTT 57.927 40.909 0.00 0.00 0.00 3.51
2078 3142 4.451900 TCGACAAGAGAAAGGAAGCTTTT 58.548 39.130 0.00 0.00 0.00 2.27
2079 3143 4.273480 TCGACAAGAGAAAGGAAGCTTTTG 59.727 41.667 0.00 0.70 33.78 2.44
2080 3144 4.273480 CGACAAGAGAAAGGAAGCTTTTGA 59.727 41.667 0.00 0.00 32.44 2.69
2081 3145 5.559799 CGACAAGAGAAAGGAAGCTTTTGAG 60.560 44.000 0.00 0.00 32.44 3.02
2082 3146 5.440610 ACAAGAGAAAGGAAGCTTTTGAGA 58.559 37.500 0.00 0.00 32.44 3.27
2083 3147 5.530543 ACAAGAGAAAGGAAGCTTTTGAGAG 59.469 40.000 0.00 0.00 32.44 3.20
2084 3148 4.650734 AGAGAAAGGAAGCTTTTGAGAGG 58.349 43.478 0.00 0.00 0.00 3.69
2085 3149 4.103943 AGAGAAAGGAAGCTTTTGAGAGGT 59.896 41.667 0.00 0.00 0.00 3.85
2086 3150 4.393834 AGAAAGGAAGCTTTTGAGAGGTC 58.606 43.478 0.00 0.00 0.00 3.85
2087 3151 2.464157 AGGAAGCTTTTGAGAGGTCG 57.536 50.000 0.00 0.00 0.00 4.79
2088 3152 1.971357 AGGAAGCTTTTGAGAGGTCGA 59.029 47.619 0.00 0.00 0.00 4.20
2089 3153 2.569404 AGGAAGCTTTTGAGAGGTCGAT 59.431 45.455 0.00 0.00 0.00 3.59
2090 3154 3.008485 AGGAAGCTTTTGAGAGGTCGATT 59.992 43.478 0.00 0.00 0.00 3.34
2091 3155 4.223032 AGGAAGCTTTTGAGAGGTCGATTA 59.777 41.667 0.00 0.00 0.00 1.75
2092 3156 5.104735 AGGAAGCTTTTGAGAGGTCGATTAT 60.105 40.000 0.00 0.00 0.00 1.28
2093 3157 5.235401 GGAAGCTTTTGAGAGGTCGATTATC 59.765 44.000 0.00 0.00 0.00 1.75
2094 3158 5.606348 AGCTTTTGAGAGGTCGATTATCT 57.394 39.130 0.00 0.00 0.00 1.98
2095 3159 5.983540 AGCTTTTGAGAGGTCGATTATCTT 58.016 37.500 0.00 0.00 0.00 2.40
2096 3160 6.045955 AGCTTTTGAGAGGTCGATTATCTTC 58.954 40.000 0.00 0.00 0.00 2.87
2097 3161 5.812642 GCTTTTGAGAGGTCGATTATCTTCA 59.187 40.000 0.00 0.00 0.00 3.02
2098 3162 6.313905 GCTTTTGAGAGGTCGATTATCTTCAA 59.686 38.462 0.00 0.00 0.00 2.69
2099 3163 7.596749 TTTTGAGAGGTCGATTATCTTCAAC 57.403 36.000 0.00 0.00 0.00 3.18
2100 3164 6.531503 TTGAGAGGTCGATTATCTTCAACT 57.468 37.500 0.00 0.00 0.00 3.16
2101 3165 6.137794 TGAGAGGTCGATTATCTTCAACTC 57.862 41.667 0.00 0.00 0.00 3.01
2102 3166 5.652452 TGAGAGGTCGATTATCTTCAACTCA 59.348 40.000 0.00 0.00 0.00 3.41
2103 3167 6.322456 TGAGAGGTCGATTATCTTCAACTCAT 59.678 38.462 0.00 0.00 0.00 2.90
2104 3168 6.511416 AGAGGTCGATTATCTTCAACTCATG 58.489 40.000 0.00 0.00 0.00 3.07
2105 3169 5.053145 AGGTCGATTATCTTCAACTCATGC 58.947 41.667 0.00 0.00 0.00 4.06
2106 3170 5.053145 GGTCGATTATCTTCAACTCATGCT 58.947 41.667 0.00 0.00 0.00 3.79
2107 3171 6.040955 AGGTCGATTATCTTCAACTCATGCTA 59.959 38.462 0.00 0.00 0.00 3.49
2108 3172 6.701841 GGTCGATTATCTTCAACTCATGCTAA 59.298 38.462 0.00 0.00 0.00 3.09
2109 3173 7.386299 GGTCGATTATCTTCAACTCATGCTAAT 59.614 37.037 0.00 0.00 0.00 1.73
2110 3174 8.768955 GTCGATTATCTTCAACTCATGCTAATT 58.231 33.333 0.00 0.00 0.00 1.40
2111 3175 8.768019 TCGATTATCTTCAACTCATGCTAATTG 58.232 33.333 0.00 0.00 0.00 2.32
2112 3176 8.554528 CGATTATCTTCAACTCATGCTAATTGT 58.445 33.333 0.00 0.00 0.00 2.71
2113 3177 9.875675 GATTATCTTCAACTCATGCTAATTGTC 57.124 33.333 0.00 0.00 0.00 3.18
2114 3178 5.784750 TCTTCAACTCATGCTAATTGTCG 57.215 39.130 0.00 0.00 0.00 4.35
2115 3179 5.478407 TCTTCAACTCATGCTAATTGTCGA 58.522 37.500 0.00 0.00 0.00 4.20
2116 3180 5.931724 TCTTCAACTCATGCTAATTGTCGAA 59.068 36.000 0.00 0.00 0.00 3.71
2117 3181 6.595326 TCTTCAACTCATGCTAATTGTCGAAT 59.405 34.615 0.00 0.00 0.00 3.34
2118 3182 7.763985 TCTTCAACTCATGCTAATTGTCGAATA 59.236 33.333 0.00 0.00 0.00 1.75
2119 3183 7.234187 TCAACTCATGCTAATTGTCGAATAC 57.766 36.000 0.00 0.00 0.00 1.89
2120 3184 7.041721 TCAACTCATGCTAATTGTCGAATACT 58.958 34.615 0.00 0.00 0.00 2.12
2121 3185 7.549134 TCAACTCATGCTAATTGTCGAATACTT 59.451 33.333 0.00 0.00 0.00 2.24
2122 3186 7.470289 ACTCATGCTAATTGTCGAATACTTC 57.530 36.000 0.00 0.00 0.00 3.01
2123 3187 7.268586 ACTCATGCTAATTGTCGAATACTTCT 58.731 34.615 0.00 0.00 0.00 2.85
2124 3188 7.436673 ACTCATGCTAATTGTCGAATACTTCTC 59.563 37.037 0.00 0.00 0.00 2.87
2125 3189 7.264947 TCATGCTAATTGTCGAATACTTCTCA 58.735 34.615 0.00 0.00 0.00 3.27
2126 3190 7.928167 TCATGCTAATTGTCGAATACTTCTCAT 59.072 33.333 0.00 0.00 0.00 2.90
2127 3191 7.468922 TGCTAATTGTCGAATACTTCTCATG 57.531 36.000 0.00 0.00 0.00 3.07
2128 3192 7.041721 TGCTAATTGTCGAATACTTCTCATGT 58.958 34.615 0.00 0.00 0.00 3.21
2129 3193 7.549134 TGCTAATTGTCGAATACTTCTCATGTT 59.451 33.333 0.00 0.00 0.00 2.71
2130 3194 8.391106 GCTAATTGTCGAATACTTCTCATGTTT 58.609 33.333 0.00 0.00 0.00 2.83
2131 3195 9.907576 CTAATTGTCGAATACTTCTCATGTTTC 57.092 33.333 0.00 0.00 0.00 2.78
2132 3196 6.721571 TTGTCGAATACTTCTCATGTTTCC 57.278 37.500 0.00 0.00 0.00 3.13
2133 3197 5.175859 TGTCGAATACTTCTCATGTTTCCC 58.824 41.667 0.00 0.00 0.00 3.97
2134 3198 5.046591 TGTCGAATACTTCTCATGTTTCCCT 60.047 40.000 0.00 0.00 0.00 4.20
2135 3199 6.153851 TGTCGAATACTTCTCATGTTTCCCTA 59.846 38.462 0.00 0.00 0.00 3.53
2136 3200 6.476053 GTCGAATACTTCTCATGTTTCCCTAC 59.524 42.308 0.00 0.00 0.00 3.18
2137 3201 6.380274 TCGAATACTTCTCATGTTTCCCTACT 59.620 38.462 0.00 0.00 0.00 2.57
2138 3202 7.558807 TCGAATACTTCTCATGTTTCCCTACTA 59.441 37.037 0.00 0.00 0.00 1.82
2139 3203 8.195436 CGAATACTTCTCATGTTTCCCTACTAA 58.805 37.037 0.00 0.00 0.00 2.24
2140 3204 9.315525 GAATACTTCTCATGTTTCCCTACTAAC 57.684 37.037 0.00 0.00 0.00 2.34
2141 3205 6.681729 ACTTCTCATGTTTCCCTACTAACA 57.318 37.500 0.00 0.00 38.50 2.41
2142 3206 7.074653 ACTTCTCATGTTTCCCTACTAACAA 57.925 36.000 0.00 0.00 37.75 2.83
2143 3207 7.514721 ACTTCTCATGTTTCCCTACTAACAAA 58.485 34.615 0.00 0.00 37.75 2.83
2144 3208 7.996644 ACTTCTCATGTTTCCCTACTAACAAAA 59.003 33.333 0.00 0.00 37.75 2.44
2145 3209 7.979444 TCTCATGTTTCCCTACTAACAAAAG 57.021 36.000 0.00 0.00 37.75 2.27
2146 3210 7.741785 TCTCATGTTTCCCTACTAACAAAAGA 58.258 34.615 0.00 0.00 37.75 2.52
2147 3211 7.660208 TCTCATGTTTCCCTACTAACAAAAGAC 59.340 37.037 0.00 0.00 37.75 3.01
2148 3212 7.514721 TCATGTTTCCCTACTAACAAAAGACT 58.485 34.615 0.00 0.00 37.75 3.24
2149 3213 8.653191 TCATGTTTCCCTACTAACAAAAGACTA 58.347 33.333 0.00 0.00 37.75 2.59
2150 3214 9.280174 CATGTTTCCCTACTAACAAAAGACTAA 57.720 33.333 0.00 0.00 37.75 2.24
2151 3215 8.897872 TGTTTCCCTACTAACAAAAGACTAAG 57.102 34.615 0.00 0.00 31.75 2.18
2152 3216 8.488668 TGTTTCCCTACTAACAAAAGACTAAGT 58.511 33.333 0.00 0.00 31.75 2.24
2153 3217 8.986847 GTTTCCCTACTAACAAAAGACTAAGTC 58.013 37.037 0.00 0.00 0.00 3.01
2154 3218 6.917533 TCCCTACTAACAAAAGACTAAGTCG 58.082 40.000 0.00 0.00 37.67 4.18
2155 3219 6.716628 TCCCTACTAACAAAAGACTAAGTCGA 59.283 38.462 0.00 0.00 37.67 4.20
2156 3220 6.805760 CCCTACTAACAAAAGACTAAGTCGAC 59.194 42.308 7.70 7.70 37.67 4.20
2157 3221 6.805760 CCTACTAACAAAAGACTAAGTCGACC 59.194 42.308 13.01 0.00 37.67 4.79
2158 3222 5.536260 ACTAACAAAAGACTAAGTCGACCC 58.464 41.667 13.01 0.00 37.67 4.46
2159 3223 3.397849 ACAAAAGACTAAGTCGACCCC 57.602 47.619 13.01 0.00 37.67 4.95
2160 3224 2.038164 ACAAAAGACTAAGTCGACCCCC 59.962 50.000 13.01 0.00 37.67 5.40
2161 3225 2.019807 AAAGACTAAGTCGACCCCCA 57.980 50.000 13.01 0.00 37.67 4.96
2162 3226 2.019807 AAGACTAAGTCGACCCCCAA 57.980 50.000 13.01 0.00 37.67 4.12
2163 3227 2.249309 AGACTAAGTCGACCCCCAAT 57.751 50.000 13.01 0.00 37.67 3.16
2164 3228 2.108970 AGACTAAGTCGACCCCCAATC 58.891 52.381 13.01 3.05 37.67 2.67
2165 3229 1.138464 GACTAAGTCGACCCCCAATCC 59.862 57.143 13.01 0.00 0.00 3.01
2166 3230 1.200519 CTAAGTCGACCCCCAATCCA 58.799 55.000 13.01 0.00 0.00 3.41
2183 3247 5.491070 CAATCCACACTACTGGAATTCTGA 58.509 41.667 5.23 0.00 43.79 3.27
2295 3359 2.423577 GTACACCTCTTCGGCAAACAT 58.576 47.619 0.00 0.00 35.61 2.71
2327 3391 2.738521 CCAGAACACGGGCACTCG 60.739 66.667 0.00 0.00 0.00 4.18
2328 3392 2.338620 CAGAACACGGGCACTCGA 59.661 61.111 0.00 0.00 0.00 4.04
2389 3453 7.226128 GGCAAAATAAAGTAGCTAACGGATAGT 59.774 37.037 0.00 0.00 33.87 2.12
2461 3525 0.886490 CAACTTTGCCGAGAGCCACT 60.886 55.000 0.00 0.00 42.71 4.00
2528 3592 1.140312 ATATGGGACCAGGCGAACAT 58.860 50.000 0.00 0.00 0.00 2.71
2589 3653 1.296715 CCCAGTAGGTGGCTGACAC 59.703 63.158 4.68 4.68 46.45 3.67
2613 3677 0.392193 CAGCTCCTGACATGTGGGAC 60.392 60.000 1.15 6.09 32.44 4.46
2646 3710 1.781025 CGAGTGCCAACTTTGCCGAA 61.781 55.000 0.00 0.00 36.52 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.076677 ACCTCTCCCGTTCTAACTCCA 59.923 52.381 0.00 0.00 0.00 3.86
16 17 0.324943 CCAACATCAACCTCTCCCGT 59.675 55.000 0.00 0.00 0.00 5.28
40 41 5.123227 TGACTCTCCAATTCGACTTTGTTT 58.877 37.500 6.55 0.00 0.00 2.83
48 49 4.081972 CCTTCTCTTGACTCTCCAATTCGA 60.082 45.833 0.00 0.00 0.00 3.71
103 104 0.671472 CGAGCTCAAGACCATGCACA 60.671 55.000 15.40 0.00 0.00 4.57
117 118 0.817013 CAGCCTCTCTTTCTCGAGCT 59.183 55.000 7.81 0.00 0.00 4.09
134 135 1.364626 ATCTCTTTCGCAAGCCGCAG 61.365 55.000 0.00 0.00 42.60 5.18
153 154 2.670939 ACATGATCATCGACTCCTCCA 58.329 47.619 4.86 0.00 0.00 3.86
154 155 3.388308 CAACATGATCATCGACTCCTCC 58.612 50.000 4.86 0.00 0.00 4.30
155 156 2.799412 GCAACATGATCATCGACTCCTC 59.201 50.000 4.86 0.00 0.00 3.71
194 195 3.729966 ACCACTTCTTTCCTTTCTCGTC 58.270 45.455 0.00 0.00 0.00 4.20
216 217 1.205655 TCCTCTTCTTCATGTGGAGCG 59.794 52.381 0.00 0.00 0.00 5.03
265 266 5.469373 TGACAAGCGATACATGAATGAAC 57.531 39.130 0.00 0.00 0.00 3.18
307 308 5.296780 CCCAAATAAGTGTAGTACATGCCAG 59.703 44.000 6.21 0.00 0.00 4.85
320 321 9.449719 AGAAAGATAGTGTAACCCAAATAAGTG 57.550 33.333 0.00 0.00 37.80 3.16
345 346 8.151141 ACAGTGCAAATTCATCATACTGATAG 57.849 34.615 0.00 0.00 34.28 2.08
367 368 5.857822 ATTCACGCATGATGATCATACAG 57.142 39.130 8.54 5.18 34.28 2.74
387 388 7.162761 TCTCAACATCCAAATTCATGCAAATT 58.837 30.769 0.00 0.00 0.00 1.82
419 420 2.290960 GGCCTTCTCCATAACCACACTT 60.291 50.000 0.00 0.00 0.00 3.16
625 628 9.159470 TGCCGCTTTTTAAAATTTTAATTTTCG 57.841 25.926 20.98 19.48 43.12 3.46
633 636 8.917415 TTTCATTTGCCGCTTTTTAAAATTTT 57.083 23.077 8.75 8.75 0.00 1.82
671 1679 1.935199 GTTCGGTTCCGTCAGTTTTCA 59.065 47.619 11.04 0.00 0.00 2.69
672 1680 1.935199 TGTTCGGTTCCGTCAGTTTTC 59.065 47.619 11.04 0.00 0.00 2.29
714 1722 4.453480 TTTTCAGGATGGGTTCTTCTGT 57.547 40.909 0.00 0.00 36.16 3.41
720 1728 2.488153 CTCGGTTTTTCAGGATGGGTTC 59.512 50.000 0.00 0.00 36.16 3.62
777 1788 0.645868 GCTCGATTCCTTCCGAAACG 59.354 55.000 0.00 0.00 45.30 3.60
846 1877 2.584835 TACATGGAAGGCAAGTGCTT 57.415 45.000 2.85 0.00 41.70 3.91
889 1939 5.763876 ACTTGGAAACTAATCAGCTAGGT 57.236 39.130 0.00 0.00 0.00 3.08
890 1940 6.173339 TCAACTTGGAAACTAATCAGCTAGG 58.827 40.000 0.00 0.00 0.00 3.02
937 1988 0.391597 TCCCCGTCAGAATAATCCGC 59.608 55.000 0.00 0.00 0.00 5.54
969 2020 6.018262 CCTGACGTTTAAGATGAACAGTCAAA 60.018 38.462 0.00 0.00 38.60 2.69
971 2022 4.988540 CCTGACGTTTAAGATGAACAGTCA 59.011 41.667 0.00 11.22 37.75 3.41
1052 2107 4.271816 CGATGGAGACGGAGCCGG 62.272 72.222 14.07 0.00 44.69 6.13
1147 2202 3.702048 CTTGCGGGGAAGGACGGA 61.702 66.667 0.00 0.00 0.00 4.69
1193 2248 7.042254 GGATGCTTTTTCTTTGCATGGAATATC 60.042 37.037 0.00 0.00 45.90 1.63
1196 2251 4.939439 GGATGCTTTTTCTTTGCATGGAAT 59.061 37.500 0.00 0.00 45.90 3.01
1199 2254 3.004862 GGGATGCTTTTTCTTTGCATGG 58.995 45.455 4.36 0.00 45.90 3.66
1220 2275 0.363846 GAAACTCGCGCGAAGAAGAG 59.636 55.000 33.99 22.46 36.83 2.85
1229 2284 1.064060 AGGCATAATTGAAACTCGCGC 59.936 47.619 0.00 0.00 0.00 6.86
1230 2285 2.597505 CGAGGCATAATTGAAACTCGCG 60.598 50.000 0.00 0.00 36.81 5.87
1231 2286 2.974165 CGAGGCATAATTGAAACTCGC 58.026 47.619 10.12 0.00 36.81 5.03
1241 2296 0.467384 AGTGCTGAGCGAGGCATAAT 59.533 50.000 0.00 0.00 40.66 1.28
1246 2301 2.813042 GACAGTGCTGAGCGAGGC 60.813 66.667 6.17 0.00 0.00 4.70
1247 2302 1.153862 GAGACAGTGCTGAGCGAGG 60.154 63.158 6.17 0.00 0.00 4.63
1248 2303 0.243365 AAGAGACAGTGCTGAGCGAG 59.757 55.000 6.17 0.00 0.00 5.03
1249 2304 0.676184 AAAGAGACAGTGCTGAGCGA 59.324 50.000 6.17 0.00 0.00 4.93
1250 2305 1.458827 GAAAAGAGACAGTGCTGAGCG 59.541 52.381 6.17 0.00 0.00 5.03
1258 2313 2.812591 CTGCATGCAGAAAAGAGACAGT 59.187 45.455 38.90 0.00 46.30 3.55
1259 2314 2.161808 CCTGCATGCAGAAAAGAGACAG 59.838 50.000 42.21 21.28 46.30 3.51
1597 2655 1.201343 GCGACGGAGAGCTTGTATTC 58.799 55.000 0.00 0.00 0.00 1.75
1662 2720 0.389166 GCTAGCTAGGCCGTGCATAG 60.389 60.000 22.10 18.76 44.37 2.23
1692 2756 2.172365 CTACGGTAAGCGTCGAAACTC 58.828 52.381 0.00 0.00 0.00 3.01
1693 2757 1.537202 ACTACGGTAAGCGTCGAAACT 59.463 47.619 0.00 0.00 0.00 2.66
1694 2758 1.969103 ACTACGGTAAGCGTCGAAAC 58.031 50.000 0.00 0.00 0.00 2.78
1702 2766 4.043037 ACTTCTGCATACTACGGTAAGC 57.957 45.455 0.00 0.00 41.35 3.09
1707 2771 6.757010 ACAATAAGAACTTCTGCATACTACGG 59.243 38.462 0.00 0.00 0.00 4.02
1708 2772 7.757097 ACAATAAGAACTTCTGCATACTACG 57.243 36.000 0.00 0.00 0.00 3.51
1729 2793 8.301252 TCCATACTACTAACTTCTGCATACAA 57.699 34.615 0.00 0.00 0.00 2.41
1731 2795 8.630917 TCTTCCATACTACTAACTTCTGCATAC 58.369 37.037 0.00 0.00 0.00 2.39
1732 2796 8.762481 TCTTCCATACTACTAACTTCTGCATA 57.238 34.615 0.00 0.00 0.00 3.14
1733 2797 7.661536 TCTTCCATACTACTAACTTCTGCAT 57.338 36.000 0.00 0.00 0.00 3.96
1735 2799 7.321153 TGTTCTTCCATACTACTAACTTCTGC 58.679 38.462 0.00 0.00 0.00 4.26
1819 2883 4.065088 CGTTGGACATGGGGAATAGTATG 58.935 47.826 0.00 0.00 0.00 2.39
1820 2884 3.971305 TCGTTGGACATGGGGAATAGTAT 59.029 43.478 0.00 0.00 0.00 2.12
1821 2885 3.133362 GTCGTTGGACATGGGGAATAGTA 59.867 47.826 0.00 0.00 42.91 1.82
1822 2886 2.093128 GTCGTTGGACATGGGGAATAGT 60.093 50.000 0.00 0.00 42.91 2.12
1823 2887 2.561569 GTCGTTGGACATGGGGAATAG 58.438 52.381 0.00 0.00 42.91 1.73
1824 2888 2.702592 GTCGTTGGACATGGGGAATA 57.297 50.000 0.00 0.00 42.91 1.75
1825 2889 3.569873 GTCGTTGGACATGGGGAAT 57.430 52.632 0.00 0.00 42.91 3.01
1834 2898 1.716826 TTGCGGGTTTGTCGTTGGAC 61.717 55.000 0.00 0.00 43.71 4.02
1835 2899 0.820074 ATTGCGGGTTTGTCGTTGGA 60.820 50.000 0.00 0.00 0.00 3.53
1836 2900 0.031449 AATTGCGGGTTTGTCGTTGG 59.969 50.000 0.00 0.00 0.00 3.77
1837 2901 1.520590 CAAATTGCGGGTTTGTCGTTG 59.479 47.619 0.00 0.00 33.12 4.10
1838 2902 1.846541 CAAATTGCGGGTTTGTCGTT 58.153 45.000 0.00 0.00 33.12 3.85
1839 2903 0.596341 GCAAATTGCGGGTTTGTCGT 60.596 50.000 0.90 0.00 38.49 4.34
1840 2904 1.281566 GGCAAATTGCGGGTTTGTCG 61.282 55.000 12.15 0.00 46.21 4.35
1841 2905 0.249657 TGGCAAATTGCGGGTTTGTC 60.250 50.000 12.15 6.07 46.21 3.18
1842 2906 0.531753 GTGGCAAATTGCGGGTTTGT 60.532 50.000 12.15 0.00 46.21 2.83
1843 2907 0.249826 AGTGGCAAATTGCGGGTTTG 60.250 50.000 12.15 0.00 46.21 2.93
1844 2908 0.467804 AAGTGGCAAATTGCGGGTTT 59.532 45.000 12.15 1.24 46.21 3.27
1845 2909 0.033366 GAAGTGGCAAATTGCGGGTT 59.967 50.000 12.15 4.55 46.21 4.11
1846 2910 1.112315 TGAAGTGGCAAATTGCGGGT 61.112 50.000 12.15 0.00 46.21 5.28
1847 2911 0.033228 TTGAAGTGGCAAATTGCGGG 59.967 50.000 12.15 0.00 46.21 6.13
1848 2912 1.139163 GTTGAAGTGGCAAATTGCGG 58.861 50.000 12.15 0.00 46.21 5.69
1849 2913 0.777631 CGTTGAAGTGGCAAATTGCG 59.222 50.000 12.15 0.00 46.21 4.85
1850 2914 1.139163 CCGTTGAAGTGGCAAATTGC 58.861 50.000 9.87 9.87 44.08 3.56
1851 2915 1.068434 ACCCGTTGAAGTGGCAAATTG 59.932 47.619 0.00 0.00 0.00 2.32
1852 2916 1.408969 ACCCGTTGAAGTGGCAAATT 58.591 45.000 0.00 0.00 0.00 1.82
1853 2917 1.339929 GAACCCGTTGAAGTGGCAAAT 59.660 47.619 0.00 0.00 0.00 2.32
1854 2918 0.741915 GAACCCGTTGAAGTGGCAAA 59.258 50.000 0.00 0.00 0.00 3.68
1855 2919 0.394488 TGAACCCGTTGAAGTGGCAA 60.394 50.000 0.00 0.00 0.00 4.52
1856 2920 0.817634 CTGAACCCGTTGAAGTGGCA 60.818 55.000 0.00 0.00 0.00 4.92
1857 2921 1.949257 CTGAACCCGTTGAAGTGGC 59.051 57.895 0.00 0.00 0.00 5.01
1858 2922 0.535102 AGCTGAACCCGTTGAAGTGG 60.535 55.000 0.00 0.00 0.00 4.00
1859 2923 1.002468 CAAGCTGAACCCGTTGAAGTG 60.002 52.381 0.00 0.00 0.00 3.16
1860 2924 1.134220 TCAAGCTGAACCCGTTGAAGT 60.134 47.619 0.00 0.00 0.00 3.01
1861 2925 1.532868 CTCAAGCTGAACCCGTTGAAG 59.467 52.381 0.00 0.00 0.00 3.02
1862 2926 1.134220 ACTCAAGCTGAACCCGTTGAA 60.134 47.619 0.00 0.00 0.00 2.69
1863 2927 0.468226 ACTCAAGCTGAACCCGTTGA 59.532 50.000 0.00 0.00 0.00 3.18
1864 2928 0.588252 CACTCAAGCTGAACCCGTTG 59.412 55.000 0.00 0.00 0.00 4.10
1865 2929 1.166531 GCACTCAAGCTGAACCCGTT 61.167 55.000 0.00 0.00 0.00 4.44
1866 2930 1.598130 GCACTCAAGCTGAACCCGT 60.598 57.895 0.00 0.00 0.00 5.28
1867 2931 0.957395 ATGCACTCAAGCTGAACCCG 60.957 55.000 0.00 0.00 34.99 5.28
1868 2932 0.524862 CATGCACTCAAGCTGAACCC 59.475 55.000 0.00 0.00 34.99 4.11
1869 2933 1.242076 ACATGCACTCAAGCTGAACC 58.758 50.000 0.00 0.00 34.99 3.62
1870 2934 2.658285 CAACATGCACTCAAGCTGAAC 58.342 47.619 0.00 0.00 34.99 3.18
1871 2935 1.001048 GCAACATGCACTCAAGCTGAA 60.001 47.619 0.00 0.00 44.26 3.02
1872 2936 0.594602 GCAACATGCACTCAAGCTGA 59.405 50.000 0.00 0.00 44.26 4.26
1873 2937 3.102515 GCAACATGCACTCAAGCTG 57.897 52.632 0.00 0.00 44.26 4.24
1883 2947 0.589729 CGTCGCCTAATGCAACATGC 60.590 55.000 0.00 0.00 45.29 4.06
1884 2948 1.006086 TCGTCGCCTAATGCAACATG 58.994 50.000 0.00 0.00 41.33 3.21
1885 2949 1.732941 TTCGTCGCCTAATGCAACAT 58.267 45.000 0.00 0.00 41.33 2.71
1886 2950 1.732941 ATTCGTCGCCTAATGCAACA 58.267 45.000 0.00 0.00 41.33 3.33
1887 2951 2.347292 CGTATTCGTCGCCTAATGCAAC 60.347 50.000 0.00 0.00 41.33 4.17
1888 2952 1.855978 CGTATTCGTCGCCTAATGCAA 59.144 47.619 0.00 0.00 41.33 4.08
1889 2953 1.065851 TCGTATTCGTCGCCTAATGCA 59.934 47.619 0.00 0.00 37.89 3.96
1890 2954 1.762419 TCGTATTCGTCGCCTAATGC 58.238 50.000 0.00 0.00 38.33 3.56
1891 2955 4.088638 CAGAATCGTATTCGTCGCCTAATG 59.911 45.833 0.00 0.00 38.33 1.90
1892 2956 4.023450 TCAGAATCGTATTCGTCGCCTAAT 60.023 41.667 0.00 0.00 38.33 1.73
1893 2957 3.313249 TCAGAATCGTATTCGTCGCCTAA 59.687 43.478 0.00 0.00 38.33 2.69
1894 2958 2.874086 TCAGAATCGTATTCGTCGCCTA 59.126 45.455 0.00 0.00 38.33 3.93
1895 2959 1.674441 TCAGAATCGTATTCGTCGCCT 59.326 47.619 0.00 0.00 38.33 5.52
1896 2960 2.044860 CTCAGAATCGTATTCGTCGCC 58.955 52.381 0.00 0.00 38.33 5.54
1897 2961 2.044860 CCTCAGAATCGTATTCGTCGC 58.955 52.381 0.00 0.00 38.33 5.19
1898 2962 3.036633 CACCTCAGAATCGTATTCGTCG 58.963 50.000 0.00 0.00 38.33 5.12
1899 2963 4.030134 ACACCTCAGAATCGTATTCGTC 57.970 45.455 0.00 0.00 38.33 4.20
1900 2964 4.082408 TCAACACCTCAGAATCGTATTCGT 60.082 41.667 0.00 0.00 38.33 3.85
1901 2965 4.421058 TCAACACCTCAGAATCGTATTCG 58.579 43.478 0.00 0.00 38.55 3.34
1902 2966 6.100004 TCTTCAACACCTCAGAATCGTATTC 58.900 40.000 0.00 0.00 0.00 1.75
1903 2967 6.037786 TCTTCAACACCTCAGAATCGTATT 57.962 37.500 0.00 0.00 0.00 1.89
1904 2968 5.661056 TCTTCAACACCTCAGAATCGTAT 57.339 39.130 0.00 0.00 0.00 3.06
1905 2969 5.047306 ACATCTTCAACACCTCAGAATCGTA 60.047 40.000 0.00 0.00 0.00 3.43
1906 2970 4.248859 CATCTTCAACACCTCAGAATCGT 58.751 43.478 0.00 0.00 0.00 3.73
1907 2971 4.248859 ACATCTTCAACACCTCAGAATCG 58.751 43.478 0.00 0.00 0.00 3.34
1908 2972 7.856145 ATAACATCTTCAACACCTCAGAATC 57.144 36.000 0.00 0.00 0.00 2.52
1909 2973 7.884877 TGAATAACATCTTCAACACCTCAGAAT 59.115 33.333 0.00 0.00 29.96 2.40
1910 2974 7.223584 TGAATAACATCTTCAACACCTCAGAA 58.776 34.615 0.00 0.00 29.96 3.02
1911 2975 6.768483 TGAATAACATCTTCAACACCTCAGA 58.232 36.000 0.00 0.00 29.96 3.27
1912 2976 7.621428 ATGAATAACATCTTCAACACCTCAG 57.379 36.000 0.00 0.00 36.30 3.35
1913 2977 7.770433 CCTATGAATAACATCTTCAACACCTCA 59.230 37.037 0.00 0.00 40.07 3.86
1914 2978 7.987458 TCCTATGAATAACATCTTCAACACCTC 59.013 37.037 0.00 0.00 40.07 3.85
1915 2979 7.861629 TCCTATGAATAACATCTTCAACACCT 58.138 34.615 0.00 0.00 40.07 4.00
1916 2980 8.682936 ATCCTATGAATAACATCTTCAACACC 57.317 34.615 0.00 0.00 40.07 4.16
1918 2982 9.778741 GGTATCCTATGAATAACATCTTCAACA 57.221 33.333 0.00 0.00 40.07 3.33
1919 2983 9.778741 TGGTATCCTATGAATAACATCTTCAAC 57.221 33.333 0.00 0.00 40.07 3.18
1920 2984 9.778741 GTGGTATCCTATGAATAACATCTTCAA 57.221 33.333 0.00 0.00 40.07 2.69
1921 2985 8.375506 GGTGGTATCCTATGAATAACATCTTCA 58.624 37.037 0.00 0.00 40.07 3.02
1922 2986 8.598041 AGGTGGTATCCTATGAATAACATCTTC 58.402 37.037 0.00 0.00 40.07 2.87
1923 2987 8.511748 AGGTGGTATCCTATGAATAACATCTT 57.488 34.615 0.00 0.00 40.07 2.40
1924 2988 8.511748 AAGGTGGTATCCTATGAATAACATCT 57.488 34.615 0.00 0.00 40.07 2.90
1927 2991 8.994500 TGTAAAGGTGGTATCCTATGAATAACA 58.006 33.333 0.00 0.00 36.74 2.41
1928 2992 9.841295 TTGTAAAGGTGGTATCCTATGAATAAC 57.159 33.333 0.00 0.00 36.74 1.89
1930 2994 9.442062 TCTTGTAAAGGTGGTATCCTATGAATA 57.558 33.333 0.00 0.00 46.24 1.75
1931 2995 8.331931 TCTTGTAAAGGTGGTATCCTATGAAT 57.668 34.615 0.00 0.00 46.24 2.57
1932 2996 7.622081 TCTCTTGTAAAGGTGGTATCCTATGAA 59.378 37.037 0.00 0.00 46.24 2.57
1933 2997 7.130099 TCTCTTGTAAAGGTGGTATCCTATGA 58.870 38.462 0.00 0.00 46.24 2.15
1934 2998 7.361457 TCTCTTGTAAAGGTGGTATCCTATG 57.639 40.000 0.00 0.00 46.24 2.23
1935 2999 7.789831 TGATCTCTTGTAAAGGTGGTATCCTAT 59.210 37.037 0.00 0.00 46.24 2.57
1936 3000 7.130099 TGATCTCTTGTAAAGGTGGTATCCTA 58.870 38.462 0.00 0.00 46.24 2.94
1937 3001 5.964477 TGATCTCTTGTAAAGGTGGTATCCT 59.036 40.000 0.00 0.00 46.24 3.24
1938 3002 6.235231 TGATCTCTTGTAAAGGTGGTATCC 57.765 41.667 0.00 0.00 46.24 2.59
1939 3003 7.731054 AGATGATCTCTTGTAAAGGTGGTATC 58.269 38.462 0.00 0.00 46.24 2.24
1940 3004 7.682787 AGATGATCTCTTGTAAAGGTGGTAT 57.317 36.000 0.00 0.00 46.24 2.73
1941 3005 7.618117 TGTAGATGATCTCTTGTAAAGGTGGTA 59.382 37.037 0.00 0.00 46.24 3.25
1942 3006 6.440647 TGTAGATGATCTCTTGTAAAGGTGGT 59.559 38.462 0.00 0.00 46.24 4.16
1943 3007 6.878317 TGTAGATGATCTCTTGTAAAGGTGG 58.122 40.000 0.00 0.00 46.24 4.61
1944 3008 9.689976 CTATGTAGATGATCTCTTGTAAAGGTG 57.310 37.037 0.00 0.00 46.24 4.00
1945 3009 8.364142 GCTATGTAGATGATCTCTTGTAAAGGT 58.636 37.037 0.00 0.00 46.24 3.50
1946 3010 8.363390 TGCTATGTAGATGATCTCTTGTAAAGG 58.637 37.037 0.00 0.00 46.24 3.11
1948 3012 8.918116 AGTGCTATGTAGATGATCTCTTGTAAA 58.082 33.333 0.00 0.00 35.28 2.01
1949 3013 8.470657 AGTGCTATGTAGATGATCTCTTGTAA 57.529 34.615 0.00 0.00 35.28 2.41
1950 3014 7.721399 TGAGTGCTATGTAGATGATCTCTTGTA 59.279 37.037 0.00 0.00 35.28 2.41
1951 3015 6.548993 TGAGTGCTATGTAGATGATCTCTTGT 59.451 38.462 0.00 0.00 35.28 3.16
1952 3016 6.862608 GTGAGTGCTATGTAGATGATCTCTTG 59.137 42.308 0.00 0.00 35.28 3.02
1953 3017 6.548993 TGTGAGTGCTATGTAGATGATCTCTT 59.451 38.462 0.00 0.00 35.28 2.85
1954 3018 6.067350 TGTGAGTGCTATGTAGATGATCTCT 58.933 40.000 0.00 0.00 38.06 3.10
1955 3019 6.324561 TGTGAGTGCTATGTAGATGATCTC 57.675 41.667 0.00 0.00 0.00 2.75
1956 3020 6.721704 TTGTGAGTGCTATGTAGATGATCT 57.278 37.500 0.00 0.00 0.00 2.75
1957 3021 7.377398 AGATTGTGAGTGCTATGTAGATGATC 58.623 38.462 0.00 0.00 0.00 2.92
1958 3022 7.300556 AGATTGTGAGTGCTATGTAGATGAT 57.699 36.000 0.00 0.00 0.00 2.45
1959 3023 6.721704 AGATTGTGAGTGCTATGTAGATGA 57.278 37.500 0.00 0.00 0.00 2.92
1960 3024 8.923683 CATAAGATTGTGAGTGCTATGTAGATG 58.076 37.037 0.00 0.00 0.00 2.90
1961 3025 8.646004 ACATAAGATTGTGAGTGCTATGTAGAT 58.354 33.333 0.00 0.00 0.00 1.98
1962 3026 8.011844 ACATAAGATTGTGAGTGCTATGTAGA 57.988 34.615 0.00 0.00 0.00 2.59
1963 3027 9.920133 ATACATAAGATTGTGAGTGCTATGTAG 57.080 33.333 0.00 0.00 33.30 2.74
1969 3033 9.703892 GAGATAATACATAAGATTGTGAGTGCT 57.296 33.333 0.00 0.00 0.00 4.40
1970 3034 9.481340 TGAGATAATACATAAGATTGTGAGTGC 57.519 33.333 0.00 0.00 0.00 4.40
1991 3055 7.597743 GCACATCAAAACTTTCTTCAATGAGAT 59.402 33.333 0.00 0.00 0.00 2.75
1992 3056 6.919662 GCACATCAAAACTTTCTTCAATGAGA 59.080 34.615 0.00 0.00 0.00 3.27
1993 3057 6.698329 TGCACATCAAAACTTTCTTCAATGAG 59.302 34.615 0.00 0.00 0.00 2.90
1994 3058 6.571605 TGCACATCAAAACTTTCTTCAATGA 58.428 32.000 0.00 0.00 0.00 2.57
1995 3059 6.831727 TGCACATCAAAACTTTCTTCAATG 57.168 33.333 0.00 0.00 0.00 2.82
1996 3060 7.384115 CAGATGCACATCAAAACTTTCTTCAAT 59.616 33.333 12.87 0.00 40.22 2.57
1997 3061 6.698329 CAGATGCACATCAAAACTTTCTTCAA 59.302 34.615 12.87 0.00 40.22 2.69
1998 3062 6.183360 ACAGATGCACATCAAAACTTTCTTCA 60.183 34.615 12.87 0.00 40.22 3.02
1999 3063 6.143438 CACAGATGCACATCAAAACTTTCTTC 59.857 38.462 12.87 0.00 40.22 2.87
2000 3064 5.981315 CACAGATGCACATCAAAACTTTCTT 59.019 36.000 12.87 0.00 40.22 2.52
2001 3065 5.300034 TCACAGATGCACATCAAAACTTTCT 59.700 36.000 12.87 0.00 40.22 2.52
2002 3066 5.522456 TCACAGATGCACATCAAAACTTTC 58.478 37.500 12.87 0.00 40.22 2.62
2003 3067 5.518848 TCACAGATGCACATCAAAACTTT 57.481 34.783 12.87 0.00 40.22 2.66
2004 3068 5.010314 ACATCACAGATGCACATCAAAACTT 59.990 36.000 12.87 0.00 40.22 2.66
2005 3069 4.521639 ACATCACAGATGCACATCAAAACT 59.478 37.500 12.87 0.00 40.22 2.66
2006 3070 4.619760 CACATCACAGATGCACATCAAAAC 59.380 41.667 12.87 0.00 40.22 2.43
2007 3071 4.278919 ACACATCACAGATGCACATCAAAA 59.721 37.500 12.87 0.00 40.22 2.44
2008 3072 3.822167 ACACATCACAGATGCACATCAAA 59.178 39.130 12.87 0.00 40.22 2.69
2009 3073 3.414269 ACACATCACAGATGCACATCAA 58.586 40.909 12.87 0.00 40.22 2.57
2010 3074 3.062122 ACACATCACAGATGCACATCA 57.938 42.857 12.87 0.00 40.22 3.07
2011 3075 5.065602 ACAATACACATCACAGATGCACATC 59.934 40.000 6.90 2.28 38.09 3.06
2012 3076 4.945543 ACAATACACATCACAGATGCACAT 59.054 37.500 6.90 0.00 0.00 3.21
2013 3077 4.154556 CACAATACACATCACAGATGCACA 59.845 41.667 6.90 0.00 0.00 4.57
2014 3078 4.655027 CACAATACACATCACAGATGCAC 58.345 43.478 6.90 0.00 0.00 4.57
2015 3079 3.127376 GCACAATACACATCACAGATGCA 59.873 43.478 6.90 0.00 0.00 3.96
2016 3080 3.376234 AGCACAATACACATCACAGATGC 59.624 43.478 6.90 0.00 0.00 3.91
2017 3081 5.106436 ACAAGCACAATACACATCACAGATG 60.106 40.000 5.50 5.50 0.00 2.90
2018 3082 5.005740 ACAAGCACAATACACATCACAGAT 58.994 37.500 0.00 0.00 0.00 2.90
2019 3083 4.388485 ACAAGCACAATACACATCACAGA 58.612 39.130 0.00 0.00 0.00 3.41
2020 3084 4.754372 ACAAGCACAATACACATCACAG 57.246 40.909 0.00 0.00 0.00 3.66
2021 3085 6.816134 ATTACAAGCACAATACACATCACA 57.184 33.333 0.00 0.00 0.00 3.58
2022 3086 9.277565 CTTAATTACAAGCACAATACACATCAC 57.722 33.333 0.00 0.00 0.00 3.06
2023 3087 8.458052 CCTTAATTACAAGCACAATACACATCA 58.542 33.333 0.00 0.00 0.00 3.07
2024 3088 7.432252 GCCTTAATTACAAGCACAATACACATC 59.568 37.037 0.00 0.00 0.00 3.06
2025 3089 7.122650 AGCCTTAATTACAAGCACAATACACAT 59.877 33.333 4.03 0.00 0.00 3.21
2026 3090 6.432783 AGCCTTAATTACAAGCACAATACACA 59.567 34.615 4.03 0.00 0.00 3.72
2027 3091 6.852664 AGCCTTAATTACAAGCACAATACAC 58.147 36.000 4.03 0.00 0.00 2.90
2028 3092 7.312154 CAAGCCTTAATTACAAGCACAATACA 58.688 34.615 4.03 0.00 0.00 2.29
2029 3093 6.751888 CCAAGCCTTAATTACAAGCACAATAC 59.248 38.462 4.03 0.00 0.00 1.89
2030 3094 6.661377 TCCAAGCCTTAATTACAAGCACAATA 59.339 34.615 4.03 0.00 0.00 1.90
2031 3095 5.480073 TCCAAGCCTTAATTACAAGCACAAT 59.520 36.000 4.03 0.00 0.00 2.71
2032 3096 4.830046 TCCAAGCCTTAATTACAAGCACAA 59.170 37.500 4.03 0.00 0.00 3.33
2033 3097 4.402829 TCCAAGCCTTAATTACAAGCACA 58.597 39.130 4.03 0.00 0.00 4.57
2034 3098 5.582550 GATCCAAGCCTTAATTACAAGCAC 58.417 41.667 4.03 0.00 0.00 4.40
2035 3099 4.335315 CGATCCAAGCCTTAATTACAAGCA 59.665 41.667 4.03 0.00 0.00 3.91
2036 3100 4.574828 TCGATCCAAGCCTTAATTACAAGC 59.425 41.667 0.00 0.00 0.00 4.01
2037 3101 5.584649 TGTCGATCCAAGCCTTAATTACAAG 59.415 40.000 0.00 0.00 0.00 3.16
2038 3102 5.492895 TGTCGATCCAAGCCTTAATTACAA 58.507 37.500 0.00 0.00 0.00 2.41
2039 3103 5.092554 TGTCGATCCAAGCCTTAATTACA 57.907 39.130 0.00 0.00 0.00 2.41
2040 3104 5.815740 TCTTGTCGATCCAAGCCTTAATTAC 59.184 40.000 10.17 0.00 41.29 1.89
2041 3105 5.984725 TCTTGTCGATCCAAGCCTTAATTA 58.015 37.500 10.17 0.00 41.29 1.40
2042 3106 4.843728 TCTTGTCGATCCAAGCCTTAATT 58.156 39.130 10.17 0.00 41.29 1.40
2043 3107 4.162320 TCTCTTGTCGATCCAAGCCTTAAT 59.838 41.667 10.17 0.00 41.29 1.40
2044 3108 3.513912 TCTCTTGTCGATCCAAGCCTTAA 59.486 43.478 10.17 0.00 41.29 1.85
2045 3109 3.096852 TCTCTTGTCGATCCAAGCCTTA 58.903 45.455 10.17 0.00 41.29 2.69
2046 3110 1.902508 TCTCTTGTCGATCCAAGCCTT 59.097 47.619 10.17 0.00 41.29 4.35
2047 3111 1.561643 TCTCTTGTCGATCCAAGCCT 58.438 50.000 10.17 0.00 41.29 4.58
2048 3112 2.386661 TTCTCTTGTCGATCCAAGCC 57.613 50.000 10.17 0.00 41.29 4.35
2049 3113 2.675348 CCTTTCTCTTGTCGATCCAAGC 59.325 50.000 10.17 0.00 41.29 4.01
2050 3114 4.193826 TCCTTTCTCTTGTCGATCCAAG 57.806 45.455 9.00 9.00 42.57 3.61
2051 3115 4.569943 CTTCCTTTCTCTTGTCGATCCAA 58.430 43.478 0.00 0.00 0.00 3.53
2052 3116 3.617531 GCTTCCTTTCTCTTGTCGATCCA 60.618 47.826 0.00 0.00 0.00 3.41
2053 3117 2.933260 GCTTCCTTTCTCTTGTCGATCC 59.067 50.000 0.00 0.00 0.00 3.36
2054 3118 3.855858 AGCTTCCTTTCTCTTGTCGATC 58.144 45.455 0.00 0.00 0.00 3.69
2055 3119 3.971245 AGCTTCCTTTCTCTTGTCGAT 57.029 42.857 0.00 0.00 0.00 3.59
2056 3120 3.753294 AAGCTTCCTTTCTCTTGTCGA 57.247 42.857 0.00 0.00 0.00 4.20
2057 3121 4.273480 TCAAAAGCTTCCTTTCTCTTGTCG 59.727 41.667 0.00 0.00 40.30 4.35
2058 3122 5.529060 TCTCAAAAGCTTCCTTTCTCTTGTC 59.471 40.000 0.00 0.00 40.30 3.18
2059 3123 5.440610 TCTCAAAAGCTTCCTTTCTCTTGT 58.559 37.500 0.00 0.00 40.30 3.16
2060 3124 5.048852 CCTCTCAAAAGCTTCCTTTCTCTTG 60.049 44.000 0.00 0.00 40.30 3.02
2061 3125 5.069318 CCTCTCAAAAGCTTCCTTTCTCTT 58.931 41.667 0.00 0.00 40.30 2.85
2062 3126 4.103943 ACCTCTCAAAAGCTTCCTTTCTCT 59.896 41.667 0.00 0.00 40.30 3.10
2063 3127 4.393834 ACCTCTCAAAAGCTTCCTTTCTC 58.606 43.478 0.00 0.00 40.30 2.87
2064 3128 4.393834 GACCTCTCAAAAGCTTCCTTTCT 58.606 43.478 0.00 0.00 40.30 2.52
2065 3129 3.187432 CGACCTCTCAAAAGCTTCCTTTC 59.813 47.826 0.00 0.00 40.30 2.62
2066 3130 3.142174 CGACCTCTCAAAAGCTTCCTTT 58.858 45.455 0.00 0.00 42.93 3.11
2067 3131 2.368875 TCGACCTCTCAAAAGCTTCCTT 59.631 45.455 0.00 0.00 0.00 3.36
2068 3132 1.971357 TCGACCTCTCAAAAGCTTCCT 59.029 47.619 0.00 0.00 0.00 3.36
2069 3133 2.457366 TCGACCTCTCAAAAGCTTCC 57.543 50.000 0.00 0.00 0.00 3.46
2070 3134 6.045955 AGATAATCGACCTCTCAAAAGCTTC 58.954 40.000 0.00 0.00 0.00 3.86
2071 3135 5.983540 AGATAATCGACCTCTCAAAAGCTT 58.016 37.500 0.00 0.00 0.00 3.74
2072 3136 5.606348 AGATAATCGACCTCTCAAAAGCT 57.394 39.130 0.00 0.00 0.00 3.74
2073 3137 5.812642 TGAAGATAATCGACCTCTCAAAAGC 59.187 40.000 0.00 0.00 0.00 3.51
2074 3138 7.547370 AGTTGAAGATAATCGACCTCTCAAAAG 59.453 37.037 0.00 0.00 34.76 2.27
2075 3139 7.386851 AGTTGAAGATAATCGACCTCTCAAAA 58.613 34.615 0.00 0.00 34.76 2.44
2076 3140 6.936279 AGTTGAAGATAATCGACCTCTCAAA 58.064 36.000 0.00 0.00 34.76 2.69
2077 3141 6.152831 TGAGTTGAAGATAATCGACCTCTCAA 59.847 38.462 0.00 0.00 34.76 3.02
2078 3142 5.652452 TGAGTTGAAGATAATCGACCTCTCA 59.348 40.000 0.00 0.00 34.76 3.27
2079 3143 6.137794 TGAGTTGAAGATAATCGACCTCTC 57.862 41.667 0.00 0.00 34.76 3.20
2080 3144 6.511416 CATGAGTTGAAGATAATCGACCTCT 58.489 40.000 0.00 0.00 34.76 3.69
2081 3145 5.176590 GCATGAGTTGAAGATAATCGACCTC 59.823 44.000 0.00 0.00 34.76 3.85
2082 3146 5.053145 GCATGAGTTGAAGATAATCGACCT 58.947 41.667 0.00 0.00 34.76 3.85
2083 3147 5.053145 AGCATGAGTTGAAGATAATCGACC 58.947 41.667 0.00 0.00 34.76 4.79
2084 3148 7.700322 TTAGCATGAGTTGAAGATAATCGAC 57.300 36.000 0.00 0.00 34.47 4.20
2085 3149 8.768019 CAATTAGCATGAGTTGAAGATAATCGA 58.232 33.333 0.00 0.00 0.00 3.59
2086 3150 8.554528 ACAATTAGCATGAGTTGAAGATAATCG 58.445 33.333 0.00 0.00 0.00 3.34
2087 3151 9.875675 GACAATTAGCATGAGTTGAAGATAATC 57.124 33.333 0.00 0.00 0.00 1.75
2088 3152 8.554528 CGACAATTAGCATGAGTTGAAGATAAT 58.445 33.333 0.00 0.00 0.00 1.28
2089 3153 7.763985 TCGACAATTAGCATGAGTTGAAGATAA 59.236 33.333 0.00 0.00 0.00 1.75
2090 3154 7.264947 TCGACAATTAGCATGAGTTGAAGATA 58.735 34.615 0.00 0.00 0.00 1.98
2091 3155 6.108687 TCGACAATTAGCATGAGTTGAAGAT 58.891 36.000 0.00 0.00 0.00 2.40
2092 3156 5.478407 TCGACAATTAGCATGAGTTGAAGA 58.522 37.500 0.00 0.00 0.00 2.87
2093 3157 5.784750 TCGACAATTAGCATGAGTTGAAG 57.215 39.130 0.00 0.00 0.00 3.02
2094 3158 6.741992 ATTCGACAATTAGCATGAGTTGAA 57.258 33.333 0.00 0.00 37.11 2.69
2095 3159 7.041721 AGTATTCGACAATTAGCATGAGTTGA 58.958 34.615 0.00 0.00 0.00 3.18
2096 3160 7.239166 AGTATTCGACAATTAGCATGAGTTG 57.761 36.000 0.00 0.00 0.00 3.16
2097 3161 7.849804 AAGTATTCGACAATTAGCATGAGTT 57.150 32.000 0.00 0.00 0.00 3.01
2098 3162 7.470289 GAAGTATTCGACAATTAGCATGAGT 57.530 36.000 0.00 0.00 34.17 3.41
2115 3179 8.822805 TGTTAGTAGGGAAACATGAGAAGTATT 58.177 33.333 0.00 0.00 30.88 1.89
2116 3180 8.375493 TGTTAGTAGGGAAACATGAGAAGTAT 57.625 34.615 0.00 0.00 30.88 2.12
2117 3181 7.786046 TGTTAGTAGGGAAACATGAGAAGTA 57.214 36.000 0.00 0.00 30.88 2.24
2118 3182 6.681729 TGTTAGTAGGGAAACATGAGAAGT 57.318 37.500 0.00 0.00 30.88 3.01
2119 3183 7.979444 TTTGTTAGTAGGGAAACATGAGAAG 57.021 36.000 0.00 0.00 35.64 2.85
2120 3184 8.215050 TCTTTTGTTAGTAGGGAAACATGAGAA 58.785 33.333 0.00 0.00 35.64 2.87
2121 3185 7.660208 GTCTTTTGTTAGTAGGGAAACATGAGA 59.340 37.037 0.00 0.00 35.64 3.27
2122 3186 7.661847 AGTCTTTTGTTAGTAGGGAAACATGAG 59.338 37.037 0.00 0.00 35.64 2.90
2123 3187 7.514721 AGTCTTTTGTTAGTAGGGAAACATGA 58.485 34.615 0.00 0.00 35.64 3.07
2124 3188 7.745620 AGTCTTTTGTTAGTAGGGAAACATG 57.254 36.000 0.00 0.00 35.64 3.21
2125 3189 9.503399 CTTAGTCTTTTGTTAGTAGGGAAACAT 57.497 33.333 0.00 0.00 35.64 2.71
2126 3190 8.488668 ACTTAGTCTTTTGTTAGTAGGGAAACA 58.511 33.333 0.00 0.00 33.92 2.83
2127 3191 8.899427 ACTTAGTCTTTTGTTAGTAGGGAAAC 57.101 34.615 0.00 0.00 0.00 2.78
2128 3192 7.869429 CGACTTAGTCTTTTGTTAGTAGGGAAA 59.131 37.037 10.83 0.00 0.00 3.13
2129 3193 7.231317 TCGACTTAGTCTTTTGTTAGTAGGGAA 59.769 37.037 10.83 0.00 0.00 3.97
2130 3194 6.716628 TCGACTTAGTCTTTTGTTAGTAGGGA 59.283 38.462 10.83 0.00 0.00 4.20
2131 3195 6.805760 GTCGACTTAGTCTTTTGTTAGTAGGG 59.194 42.308 8.70 0.00 0.00 3.53
2132 3196 6.805760 GGTCGACTTAGTCTTTTGTTAGTAGG 59.194 42.308 16.46 0.00 0.00 3.18
2133 3197 6.805760 GGGTCGACTTAGTCTTTTGTTAGTAG 59.194 42.308 16.46 0.00 0.00 2.57
2134 3198 6.294731 GGGGTCGACTTAGTCTTTTGTTAGTA 60.295 42.308 16.46 0.00 0.00 1.82
2135 3199 5.510349 GGGGTCGACTTAGTCTTTTGTTAGT 60.510 44.000 16.46 0.00 0.00 2.24
2136 3200 4.928020 GGGGTCGACTTAGTCTTTTGTTAG 59.072 45.833 16.46 0.00 0.00 2.34
2137 3201 4.262592 GGGGGTCGACTTAGTCTTTTGTTA 60.263 45.833 16.46 0.00 0.00 2.41
2138 3202 3.495629 GGGGGTCGACTTAGTCTTTTGTT 60.496 47.826 16.46 0.00 0.00 2.83
2139 3203 2.038164 GGGGGTCGACTTAGTCTTTTGT 59.962 50.000 16.46 0.00 0.00 2.83
2140 3204 2.038033 TGGGGGTCGACTTAGTCTTTTG 59.962 50.000 16.46 0.00 0.00 2.44
2141 3205 2.332117 TGGGGGTCGACTTAGTCTTTT 58.668 47.619 16.46 0.00 0.00 2.27
2142 3206 2.019807 TGGGGGTCGACTTAGTCTTT 57.980 50.000 16.46 0.00 0.00 2.52
2143 3207 2.019807 TTGGGGGTCGACTTAGTCTT 57.980 50.000 16.46 0.00 0.00 3.01
2144 3208 2.108970 GATTGGGGGTCGACTTAGTCT 58.891 52.381 16.46 0.00 0.00 3.24
2145 3209 1.138464 GGATTGGGGGTCGACTTAGTC 59.862 57.143 16.46 1.64 0.00 2.59
2146 3210 1.201424 GGATTGGGGGTCGACTTAGT 58.799 55.000 16.46 0.00 0.00 2.24
2147 3211 1.134491 GTGGATTGGGGGTCGACTTAG 60.134 57.143 16.46 0.00 0.00 2.18
2148 3212 0.906775 GTGGATTGGGGGTCGACTTA 59.093 55.000 16.46 0.00 0.00 2.24
2149 3213 1.131303 TGTGGATTGGGGGTCGACTT 61.131 55.000 16.46 0.00 0.00 3.01
2150 3214 1.537889 TGTGGATTGGGGGTCGACT 60.538 57.895 16.46 0.00 0.00 4.18
2151 3215 1.376812 GTGTGGATTGGGGGTCGAC 60.377 63.158 7.13 7.13 0.00 4.20
2152 3216 0.252330 TAGTGTGGATTGGGGGTCGA 60.252 55.000 0.00 0.00 0.00 4.20
2153 3217 0.107848 GTAGTGTGGATTGGGGGTCG 60.108 60.000 0.00 0.00 0.00 4.79
2154 3218 1.065418 CAGTAGTGTGGATTGGGGGTC 60.065 57.143 0.00 0.00 0.00 4.46
2155 3219 0.991920 CAGTAGTGTGGATTGGGGGT 59.008 55.000 0.00 0.00 0.00 4.95
2156 3220 0.255890 CCAGTAGTGTGGATTGGGGG 59.744 60.000 0.00 0.00 40.44 5.40
2157 3221 1.285280 TCCAGTAGTGTGGATTGGGG 58.715 55.000 0.00 0.00 41.99 4.96
2158 3222 3.652057 ATTCCAGTAGTGTGGATTGGG 57.348 47.619 0.00 0.00 46.31 4.12
2159 3223 4.637534 CAGAATTCCAGTAGTGTGGATTGG 59.362 45.833 0.65 0.00 46.31 3.16
2160 3224 5.491070 TCAGAATTCCAGTAGTGTGGATTG 58.509 41.667 0.65 0.00 46.31 2.67
2161 3225 5.738909 CTCAGAATTCCAGTAGTGTGGATT 58.261 41.667 0.65 0.00 46.31 3.01
2162 3226 4.383552 GCTCAGAATTCCAGTAGTGTGGAT 60.384 45.833 0.65 0.00 46.31 3.41
2163 3227 3.055819 GCTCAGAATTCCAGTAGTGTGGA 60.056 47.826 0.65 0.00 45.37 4.02
2164 3228 3.055530 AGCTCAGAATTCCAGTAGTGTGG 60.056 47.826 0.65 0.00 39.19 4.17
2165 3229 4.199432 AGCTCAGAATTCCAGTAGTGTG 57.801 45.455 0.65 0.00 0.00 3.82
2166 3230 4.142359 CGTAGCTCAGAATTCCAGTAGTGT 60.142 45.833 0.65 0.00 0.00 3.55
2295 3359 1.004560 CTGGCTCTCGGCAAACTCA 60.005 57.895 0.00 0.00 45.84 3.41
2340 3404 3.220110 AGTGGTACTGTTTGTCTCTCGA 58.780 45.455 0.00 0.00 0.00 4.04
2347 3411 0.466543 TGCCGAGTGGTACTGTTTGT 59.533 50.000 0.00 0.00 37.67 2.83
2389 3453 1.514087 GAACCGCCGTCACCATCTA 59.486 57.895 0.00 0.00 0.00 1.98
2393 3457 4.308458 CAGGAACCGCCGTCACCA 62.308 66.667 0.00 0.00 43.43 4.17
2441 3505 1.449782 TGGCTCTCGGCAAAGTTGA 59.550 52.632 0.00 0.00 43.40 3.18
2511 3575 1.077501 CATGTTCGCCTGGTCCCAT 60.078 57.895 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.