Multiple sequence alignment - TraesCS2A01G080200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G080200 chr2A 100.000 3681 0 0 1 3681 36204116 36200436 0.000000e+00 6798.0
1 TraesCS2A01G080200 chr2A 85.990 621 63 15 1324 1924 36235381 36234765 0.000000e+00 643.0
2 TraesCS2A01G080200 chr2A 84.615 650 69 16 40 664 80852805 80852162 5.220000e-173 617.0
3 TraesCS2A01G080200 chr2A 94.828 348 17 1 881 1228 36235706 36235360 3.230000e-150 542.0
4 TraesCS2A01G080200 chr2A 90.962 343 26 4 881 1222 36190731 36190393 1.200000e-124 457.0
5 TraesCS2A01G080200 chr2A 92.284 324 19 5 1958 2275 36234669 36234346 4.330000e-124 455.0
6 TraesCS2A01G080200 chr2A 89.145 304 26 7 918 1215 36392735 36392433 4.490000e-99 372.0
7 TraesCS2A01G080200 chr2A 84.488 303 32 10 2000 2288 36391914 36391613 6.020000e-73 285.0
8 TraesCS2A01G080200 chr2A 88.210 229 14 7 3124 3351 36234011 36233795 1.010000e-65 261.0
9 TraesCS2A01G080200 chr2A 93.678 174 10 1 2317 2489 780182356 780182183 3.650000e-65 259.0
10 TraesCS2A01G080200 chr2A 81.163 361 26 14 2993 3351 36189400 36189080 6.100000e-63 252.0
11 TraesCS2A01G080200 chr2A 82.731 249 27 12 2049 2288 36189901 36189660 1.340000e-49 207.0
12 TraesCS2A01G080200 chr2A 95.763 118 5 0 2491 2608 576870531 576870414 1.350000e-44 191.0
13 TraesCS2A01G080200 chr2A 96.522 115 3 1 2483 2597 676458902 676459015 4.850000e-44 189.0
14 TraesCS2A01G080200 chr2A 81.604 212 28 7 3479 3681 164917165 164916956 8.180000e-37 165.0
15 TraesCS2A01G080200 chr2A 97.143 35 1 0 1764 1798 36189969 36189935 3.970000e-05 60.2
16 TraesCS2A01G080200 chr2B 89.842 1073 49 27 891 1946 54888320 54887291 0.000000e+00 1323.0
17 TraesCS2A01G080200 chr2B 89.109 909 61 15 2782 3680 54886506 54885626 0.000000e+00 1096.0
18 TraesCS2A01G080200 chr2B 91.415 431 34 1 1303 1730 55032496 55032066 4.090000e-164 588.0
19 TraesCS2A01G080200 chr2B 96.203 316 12 0 1958 2273 54887231 54886916 5.450000e-143 518.0
20 TraesCS2A01G080200 chr2B 86.824 425 38 7 1326 1738 54787125 54786707 3.350000e-125 459.0
21 TraesCS2A01G080200 chr2B 86.480 392 50 1 1320 1711 122926752 122927140 9.450000e-116 427.0
22 TraesCS2A01G080200 chr2B 89.318 337 26 4 1958 2288 55031703 55031371 7.350000e-112 414.0
23 TraesCS2A01G080200 chr2B 89.124 331 30 5 900 1228 54787432 54787106 1.230000e-109 407.0
24 TraesCS2A01G080200 chr2B 85.496 393 52 3 1320 1711 122992556 122992944 4.430000e-109 405.0
25 TraesCS2A01G080200 chr2B 89.869 306 20 9 918 1222 55210336 55210041 2.070000e-102 383.0
26 TraesCS2A01G080200 chr2B 85.027 374 28 16 2993 3351 55031171 55030811 4.520000e-94 355.0
27 TraesCS2A01G080200 chr2B 85.811 296 30 5 2000 2288 55513892 55513602 1.660000e-78 303.0
28 TraesCS2A01G080200 chr2B 78.327 526 62 34 2002 2491 55855106 55854597 3.600000e-75 292.0
29 TraesCS2A01G080200 chr2B 83.498 303 35 10 2000 2288 55202766 55202465 6.060000e-68 268.0
30 TraesCS2A01G080200 chr2B 83.618 293 35 8 2002 2288 55209545 55209260 2.820000e-66 263.0
31 TraesCS2A01G080200 chr2B 89.831 177 14 2 2320 2492 54886914 54886738 1.330000e-54 224.0
32 TraesCS2A01G080200 chr2B 87.113 194 16 5 3167 3351 54785787 54785594 1.040000e-50 211.0
33 TraesCS2A01G080200 chr2B 89.855 138 14 0 1797 1934 55031939 55031802 1.050000e-40 178.0
34 TraesCS2A01G080200 chr2B 83.246 191 23 7 3361 3547 601733967 601734152 2.270000e-37 167.0
35 TraesCS2A01G080200 chr2B 85.833 120 14 2 3563 3681 55226041 55225924 1.390000e-24 124.0
36 TraesCS2A01G080200 chr2B 85.833 120 14 2 3563 3681 55854310 55854193 1.390000e-24 124.0
37 TraesCS2A01G080200 chr2B 97.143 35 1 0 1764 1798 54786631 54786597 3.970000e-05 60.2
38 TraesCS2A01G080200 chr2B 97.143 35 1 0 853 887 54787525 54787491 3.970000e-05 60.2
39 TraesCS2A01G080200 chr2D 91.885 838 37 16 891 1727 33049702 33048895 0.000000e+00 1142.0
40 TraesCS2A01G080200 chr2D 93.732 702 42 2 2981 3681 33047757 33047057 0.000000e+00 1051.0
41 TraesCS2A01G080200 chr2D 93.807 549 11 4 1746 2283 33048839 33048303 0.000000e+00 804.0
42 TraesCS2A01G080200 chr2D 88.054 519 38 12 10 508 3048877 3048363 8.800000e-166 593.0
43 TraesCS2A01G080200 chr2D 91.190 420 30 7 1303 1720 33165094 33164680 6.900000e-157 564.0
44 TraesCS2A01G080200 chr2D 93.732 351 19 3 10 358 540166611 540166262 1.170000e-144 523.0
45 TraesCS2A01G080200 chr2D 85.603 514 45 15 1958 2448 33164313 33163806 2.540000e-141 512.0
46 TraesCS2A01G080200 chr2D 93.215 339 13 4 900 1228 33165417 33165079 1.190000e-134 490.0
47 TraesCS2A01G080200 chr2D 88.372 387 39 2 1326 1712 32992656 32992276 9.310000e-126 460.0
48 TraesCS2A01G080200 chr2D 85.480 427 51 3 1320 1738 79085245 79085668 5.650000e-118 435.0
49 TraesCS2A01G080200 chr2D 83.673 392 52 6 1343 1729 33373946 33373562 3.500000e-95 359.0
50 TraesCS2A01G080200 chr2D 87.382 317 32 6 915 1227 33315479 33315167 1.260000e-94 357.0
51 TraesCS2A01G080200 chr2D 88.475 295 29 5 936 1226 33374245 33373952 5.850000e-93 351.0
52 TraesCS2A01G080200 chr2D 84.393 346 35 10 1958 2288 32992174 32991833 4.590000e-84 322.0
53 TraesCS2A01G080200 chr2D 88.764 267 23 5 400 664 3048421 3048160 1.650000e-83 320.0
54 TraesCS2A01G080200 chr2D 87.732 269 31 1 399 667 558291706 558291440 2.760000e-81 313.0
55 TraesCS2A01G080200 chr2D 83.158 380 23 22 2984 3354 33163766 33163419 3.570000e-80 309.0
56 TraesCS2A01G080200 chr2D 85.333 300 30 8 2002 2288 33314578 33314280 7.730000e-77 298.0
57 TraesCS2A01G080200 chr2D 95.977 174 7 0 2594 2767 33048167 33047994 2.160000e-72 283.0
58 TraesCS2A01G080200 chr2D 84.483 290 29 10 2011 2288 33241321 33241036 4.680000e-69 272.0
59 TraesCS2A01G080200 chr2D 84.000 300 31 8 2000 2286 33373441 33373146 4.680000e-69 272.0
60 TraesCS2A01G080200 chr2D 82.943 299 35 4 2002 2288 33580389 33580095 4.720000e-64 255.0
61 TraesCS2A01G080200 chr2D 89.119 193 19 2 3161 3351 32991447 32991255 4.750000e-59 239.0
62 TraesCS2A01G080200 chr2D 84.332 217 20 6 1731 1933 33164633 33164417 2.240000e-47 200.0
63 TraesCS2A01G080200 chr2D 94.915 118 5 1 2480 2597 646008264 646008380 2.260000e-42 183.0
64 TraesCS2A01G080200 chr2D 83.761 117 16 2 3566 3681 33579372 33579258 1.400000e-19 108.0
65 TraesCS2A01G080200 chr2D 83.333 114 16 2 3569 3681 33239657 33239546 6.500000e-18 102.0
66 TraesCS2A01G080200 chr2D 93.939 66 3 1 2672 2737 33047258 33047194 8.410000e-17 99.0
67 TraesCS2A01G080200 chr2D 92.308 65 5 0 787 851 32994870 32994806 3.910000e-15 93.5
68 TraesCS2A01G080200 chr2D 92.424 66 2 2 711 774 33015162 33015098 1.410000e-14 91.6
69 TraesCS2A01G080200 chr2D 94.444 54 2 1 854 906 32993014 32992961 8.470000e-12 82.4
70 TraesCS2A01G080200 chr2D 97.143 35 1 0 1764 1798 32992188 32992154 3.970000e-05 60.2
71 TraesCS2A01G080200 chr5D 87.794 680 55 12 10 664 442761669 442760993 0.000000e+00 771.0
72 TraesCS2A01G080200 chr5D 95.635 252 11 0 2900 3151 197752346 197752597 4.430000e-109 405.0
73 TraesCS2A01G080200 chr5D 95.690 116 5 0 2489 2604 532242501 532242616 1.750000e-43 187.0
74 TraesCS2A01G080200 chr7A 86.619 695 55 17 1 664 210563799 210564486 0.000000e+00 734.0
75 TraesCS2A01G080200 chr7A 82.920 685 59 31 10 664 50460815 50461471 6.900000e-157 564.0
76 TraesCS2A01G080200 chr7A 81.739 460 62 15 40 484 715329994 715329542 7.510000e-97 364.0
77 TraesCS2A01G080200 chr7A 82.124 386 54 5 1350 1729 78217816 78218192 2.130000e-82 316.0
78 TraesCS2A01G080200 chr7A 92.857 126 7 2 2491 2616 187189594 187189471 8.120000e-42 182.0
79 TraesCS2A01G080200 chr7A 86.747 83 9 2 3243 3323 78219844 78219926 1.410000e-14 91.6
80 TraesCS2A01G080200 chr7A 85.542 83 10 2 3243 3323 78397216 78397298 6.550000e-13 86.1
81 TraesCS2A01G080200 chr7A 87.324 71 9 0 3189 3259 649475048 649475118 8.470000e-12 82.4
82 TraesCS2A01G080200 chr7A 100.000 28 0 0 1881 1908 84247648 84247621 7.000000e-03 52.8
83 TraesCS2A01G080200 chr1A 85.780 654 51 26 40 664 86066635 86065995 0.000000e+00 654.0
84 TraesCS2A01G080200 chr1A 96.522 115 4 0 2484 2598 114551581 114551467 1.350000e-44 191.0
85 TraesCS2A01G080200 chr1A 98.148 108 2 0 2490 2597 56105918 56105811 4.850000e-44 189.0
86 TraesCS2A01G080200 chr1A 97.248 109 3 0 2489 2597 441238350 441238242 6.280000e-43 185.0
87 TraesCS2A01G080200 chr1A 95.690 116 4 1 2486 2600 584070211 584070096 6.280000e-43 185.0
88 TraesCS2A01G080200 chr1D 88.844 493 32 10 10 484 326523108 326522621 5.300000e-163 584.0
89 TraesCS2A01G080200 chr1D 87.771 507 36 15 1 484 63669306 63669809 1.480000e-158 569.0
90 TraesCS2A01G080200 chr1D 79.039 229 36 10 1362 1585 486926213 486925992 2.960000e-31 147.0
91 TraesCS2A01G080200 chr3D 93.035 402 23 2 2900 3296 551677512 551677111 1.910000e-162 582.0
92 TraesCS2A01G080200 chr3D 92.083 240 13 4 427 664 566899878 566900113 2.120000e-87 333.0
93 TraesCS2A01G080200 chr3D 97.959 147 3 0 2638 2784 216613288 216613142 4.720000e-64 255.0
94 TraesCS2A01G080200 chr3D 94.828 116 5 1 2483 2598 101772839 101772953 2.920000e-41 180.0
95 TraesCS2A01G080200 chr3D 92.683 123 8 1 2481 2602 230765762 230765640 3.780000e-40 176.0
96 TraesCS2A01G080200 chr3D 82.540 189 24 7 3364 3547 482835080 482834896 1.370000e-34 158.0
97 TraesCS2A01G080200 chr3D 80.189 212 31 7 3479 3681 216613254 216613045 8.240000e-32 148.0
98 TraesCS2A01G080200 chr3D 89.873 79 8 0 2196 2274 216613550 216613472 6.500000e-18 102.0
99 TraesCS2A01G080200 chr3D 98.182 55 1 0 2782 2836 216613056 216613002 3.030000e-16 97.1
100 TraesCS2A01G080200 chr3D 95.122 41 1 1 2634 2673 284823860 284823900 3.070000e-06 63.9
101 TraesCS2A01G080200 chr4D 87.429 525 34 14 10 508 242792238 242791720 3.190000e-160 575.0
102 TraesCS2A01G080200 chr4D 93.443 122 5 3 2483 2602 131123841 131123721 1.050000e-40 178.0
103 TraesCS2A01G080200 chr4D 94.783 115 5 1 2483 2597 208443004 208442891 1.050000e-40 178.0
104 TraesCS2A01G080200 chr4D 94.783 115 5 1 2483 2597 508076180 508076067 1.050000e-40 178.0
105 TraesCS2A01G080200 chr4D 93.913 115 6 1 2483 2597 145560845 145560958 4.890000e-39 172.0
106 TraesCS2A01G080200 chr4D 93.913 115 6 1 2483 2597 362254635 362254748 4.890000e-39 172.0
107 TraesCS2A01G080200 chr4D 93.913 115 6 1 2483 2597 374220551 374220664 4.890000e-39 172.0
108 TraesCS2A01G080200 chr4D 94.595 111 5 1 2488 2597 80852936 80853046 1.760000e-38 171.0
109 TraesCS2A01G080200 chr5A 87.747 506 28 13 10 484 656740892 656740390 8.930000e-156 560.0
110 TraesCS2A01G080200 chr5A 81.718 454 67 11 40 484 548438281 548437835 7.510000e-97 364.0
111 TraesCS2A01G080200 chr5A 84.840 376 37 12 2984 3351 565537136 565536773 9.720000e-96 361.0
112 TraesCS2A01G080200 chr5A 88.776 294 19 7 379 667 567685971 567685687 7.570000e-92 348.0
113 TraesCS2A01G080200 chr5A 97.959 147 3 0 2638 2784 32013357 32013503 4.720000e-64 255.0
114 TraesCS2A01G080200 chr5A 91.954 174 13 1 2317 2489 32013171 32013344 3.670000e-60 243.0
115 TraesCS2A01G080200 chr5A 98.214 112 2 0 2489 2600 402092634 402092745 2.900000e-46 196.0
116 TraesCS2A01G080200 chr5A 97.297 111 3 0 2491 2601 364372728 364372838 4.850000e-44 189.0
117 TraesCS2A01G080200 chr5A 98.182 55 1 0 2782 2836 32013589 32013643 3.030000e-16 97.1
118 TraesCS2A01G080200 chr6A 85.740 561 43 18 1 532 38435902 38436454 3.210000e-155 558.0
119 TraesCS2A01G080200 chr6A 97.959 147 3 0 2638 2784 439516550 439516696 4.720000e-64 255.0
120 TraesCS2A01G080200 chr6A 98.148 108 2 0 2490 2597 150232596 150232489 4.850000e-44 189.0
121 TraesCS2A01G080200 chr6A 97.273 110 3 0 2491 2600 108945420 108945311 1.750000e-43 187.0
122 TraesCS2A01G080200 chr6A 86.628 172 19 3 3364 3533 595762692 595762861 1.750000e-43 187.0
123 TraesCS2A01G080200 chr6A 91.729 133 10 1 2317 2448 439516387 439516519 2.260000e-42 183.0
124 TraesCS2A01G080200 chr6A 89.130 138 12 3 2357 2492 108079718 108079582 6.320000e-38 169.0
125 TraesCS2A01G080200 chr6A 80.556 216 29 6 3476 3681 439516581 439516793 1.770000e-33 154.0
126 TraesCS2A01G080200 chr6A 81.865 193 24 8 3361 3547 561452069 561452256 6.370000e-33 152.0
127 TraesCS2A01G080200 chr6A 82.105 190 23 8 3364 3547 561588566 561588382 6.370000e-33 152.0
128 TraesCS2A01G080200 chr6A 82.105 190 23 8 3364 3547 561601822 561601638 6.370000e-33 152.0
129 TraesCS2A01G080200 chr6A 95.604 91 4 0 2184 2274 439516299 439516389 2.960000e-31 147.0
130 TraesCS2A01G080200 chr6A 98.182 55 1 0 2782 2836 439516782 439516836 3.030000e-16 97.1
131 TraesCS2A01G080200 chr6A 90.741 54 1 2 2235 2288 108079836 108079787 6.600000e-08 69.4
132 TraesCS2A01G080200 chr4A 92.500 360 22 5 10 365 743024582 743024224 9.120000e-141 510.0
133 TraesCS2A01G080200 chr4A 92.479 359 21 6 10 365 743001389 743001034 3.280000e-140 508.0
134 TraesCS2A01G080200 chr4A 94.444 252 14 0 2900 3151 444118615 444118364 4.460000e-104 388.0
135 TraesCS2A01G080200 chr4A 97.959 147 3 0 2638 2784 411854535 411854389 4.720000e-64 255.0
136 TraesCS2A01G080200 chr4A 92.262 168 12 1 2323 2489 411854715 411854548 1.710000e-58 237.0
137 TraesCS2A01G080200 chr4A 96.296 108 4 0 2491 2598 632136462 632136355 1.050000e-40 178.0
138 TraesCS2A01G080200 chr4A 82.812 192 24 7 3361 3547 30778200 30778387 2.940000e-36 163.0
139 TraesCS2A01G080200 chr4A 81.221 213 27 6 3479 3681 411854501 411854292 3.800000e-35 159.0
140 TraesCS2A01G080200 chr4A 93.407 91 6 0 2184 2274 411854809 411854719 6.410000e-28 135.0
141 TraesCS2A01G080200 chr4A 89.130 92 8 2 2150 2240 648881643 648881733 3.000000e-21 113.0
142 TraesCS2A01G080200 chr7D 92.676 355 22 1 2900 3250 190391865 190391511 3.280000e-140 508.0
143 TraesCS2A01G080200 chr7D 82.383 386 53 5 1350 1729 73743652 73744028 4.590000e-84 322.0
144 TraesCS2A01G080200 chr7D 79.420 379 63 10 1358 1731 74391848 74392216 1.700000e-63 254.0
145 TraesCS2A01G080200 chr7D 80.055 366 52 11 1366 1719 73218325 73218681 6.100000e-63 252.0
146 TraesCS2A01G080200 chr7D 77.608 393 51 20 1360 1729 82449085 82448707 1.730000e-48 204.0
147 TraesCS2A01G080200 chr7D 87.919 149 13 3 2150 2297 596015567 596015711 1.760000e-38 171.0
148 TraesCS2A01G080200 chr7D 86.429 140 17 2 3361 3499 73745098 73745236 6.370000e-33 152.0
149 TraesCS2A01G080200 chr7D 78.667 225 41 4 1362 1585 68801834 68802052 3.830000e-30 143.0
150 TraesCS2A01G080200 chr7D 84.028 144 19 2 2148 2291 82448243 82448104 6.410000e-28 135.0
151 TraesCS2A01G080200 chr7D 84.252 127 17 2 2148 2271 73180295 73180421 1.800000e-23 121.0
152 TraesCS2A01G080200 chr7D 78.261 184 33 4 2147 2330 73611933 73611757 1.080000e-20 111.0
153 TraesCS2A01G080200 chr7D 100.000 28 0 0 1881 1908 82448734 82448707 7.000000e-03 52.8
154 TraesCS2A01G080200 chr3A 95.189 291 14 0 2900 3190 496376950 496376660 9.310000e-126 460.0
155 TraesCS2A01G080200 chr3A 97.959 147 3 0 2638 2784 749828521 749828375 4.720000e-64 255.0
156 TraesCS2A01G080200 chr3A 93.103 174 11 1 2317 2489 749828707 749828534 1.700000e-63 254.0
157 TraesCS2A01G080200 chr3A 94.167 120 7 0 2478 2597 661930640 661930759 2.260000e-42 183.0
158 TraesCS2A01G080200 chr3A 93.496 123 7 1 2477 2598 296504297 296504175 8.120000e-42 182.0
159 TraesCS2A01G080200 chr3A 94.167 120 5 2 2480 2599 610593600 610593483 8.120000e-42 182.0
160 TraesCS2A01G080200 chr3A 98.182 55 1 0 2782 2836 749828289 749828235 3.030000e-16 97.1
161 TraesCS2A01G080200 chr7B 83.204 387 50 8 1352 1732 15935581 15935958 1.270000e-89 340.0
162 TraesCS2A01G080200 chr7B 97.959 147 3 0 2638 2784 618519579 618519725 4.720000e-64 255.0
163 TraesCS2A01G080200 chr7B 78.934 394 64 8 1347 1731 17507874 17508257 2.190000e-62 250.0
164 TraesCS2A01G080200 chr7B 93.413 167 10 1 2324 2489 618519400 618519566 2.840000e-61 246.0
165 TraesCS2A01G080200 chr7B 77.494 391 57 17 1359 1729 31447940 31447561 4.820000e-49 206.0
166 TraesCS2A01G080200 chr7B 76.943 386 58 16 1358 1723 29829800 29829426 1.350000e-44 191.0
167 TraesCS2A01G080200 chr7B 94.167 120 7 0 2488 2607 739940874 739940993 2.260000e-42 183.0
168 TraesCS2A01G080200 chr7B 76.350 389 61 17 1359 1727 30765965 30765588 2.920000e-41 180.0
169 TraesCS2A01G080200 chr7B 90.678 118 11 0 2154 2271 674145086 674145203 1.370000e-34 158.0
170 TraesCS2A01G080200 chr7B 86.429 140 17 2 3361 3499 16952776 16952914 6.370000e-33 152.0
171 TraesCS2A01G080200 chr7B 79.279 222 41 4 1348 1568 674144477 674144694 2.290000e-32 150.0
172 TraesCS2A01G080200 chr7B 79.204 226 38 6 1362 1585 10102230 10102448 8.240000e-32 148.0
173 TraesCS2A01G080200 chr7B 80.000 215 32 7 3476 3681 618519610 618519822 8.240000e-32 148.0
174 TraesCS2A01G080200 chr7B 79.111 225 37 7 1363 1585 9811653 9811869 2.960000e-31 147.0
175 TraesCS2A01G080200 chr7B 83.333 144 20 2 2148 2291 30765153 30765014 2.980000e-26 130.0
176 TraesCS2A01G080200 chr7B 85.039 127 16 2 2148 2271 15936261 15936387 3.860000e-25 126.0
177 TraesCS2A01G080200 chr7B 83.200 125 21 0 2147 2271 16733279 16733403 8.350000e-22 115.0
178 TraesCS2A01G080200 chr7B 76.168 214 41 8 1361 1567 7717396 7717186 1.810000e-18 104.0
179 TraesCS2A01G080200 chr7B 100.000 53 0 0 2782 2834 618519811 618519863 8.410000e-17 99.0
180 TraesCS2A01G080200 chr7B 81.250 112 21 0 1358 1469 17249036 17249147 1.410000e-14 91.6
181 TraesCS2A01G080200 chr7B 100.000 28 0 0 1881 1908 31445394 31445367 7.000000e-03 52.8
182 TraesCS2A01G080200 chr7B 100.000 28 0 0 1881 1908 31447588 31447561 7.000000e-03 52.8
183 TraesCS2A01G080200 chr3B 98.639 147 2 0 2638 2784 83160062 83160208 1.010000e-65 261.0
184 TraesCS2A01G080200 chr3B 91.379 174 14 1 2317 2489 83159876 83160049 1.710000e-58 237.0
185 TraesCS2A01G080200 chr3B 90.541 148 8 3 3360 3505 229463169 229463312 1.350000e-44 191.0
186 TraesCS2A01G080200 chr3B 94.175 103 6 0 3549 3651 229463311 229463413 1.370000e-34 158.0
187 TraesCS2A01G080200 chr3B 98.182 55 1 0 2782 2836 83160294 83160348 3.030000e-16 97.1
188 TraesCS2A01G080200 chr5B 93.678 174 10 1 2317 2489 400139790 400139617 3.650000e-65 259.0
189 TraesCS2A01G080200 chr5B 97.959 147 3 0 2638 2784 400139604 400139458 4.720000e-64 255.0
190 TraesCS2A01G080200 chr5B 96.599 147 5 0 2638 2784 443004616 443004470 1.020000e-60 244.0
191 TraesCS2A01G080200 chr5B 91.954 174 13 1 2317 2489 443004802 443004629 3.670000e-60 243.0
192 TraesCS2A01G080200 chr5B 80.751 213 28 6 3479 3681 400139570 400139361 1.770000e-33 154.0
193 TraesCS2A01G080200 chr5B 79.717 212 32 7 3479 3681 443004582 443004373 3.830000e-30 143.0
194 TraesCS2A01G080200 chr5B 85.385 130 13 3 1999 2128 588784317 588784440 2.980000e-26 130.0
195 TraesCS2A01G080200 chr5B 98.182 55 1 0 2782 2836 400139372 400139318 3.030000e-16 97.1
196 TraesCS2A01G080200 chr5B 98.182 55 1 0 2782 2836 443004384 443004330 3.030000e-16 97.1
197 TraesCS2A01G080200 chr1B 93.678 174 10 1 2317 2489 4617729 4617556 3.650000e-65 259.0
198 TraesCS2A01G080200 chr1B 97.279 147 4 0 2638 2784 4617543 4617397 2.190000e-62 250.0
199 TraesCS2A01G080200 chr1B 92.063 126 8 1 2472 2597 582724549 582724672 3.780000e-40 176.0
200 TraesCS2A01G080200 chr1B 80.751 213 28 6 3479 3681 4617509 4617300 1.770000e-33 154.0
201 TraesCS2A01G080200 chr1B 78.603 229 40 8 1362 1585 678116059 678115835 3.830000e-30 143.0
202 TraesCS2A01G080200 chr1B 90.361 83 8 0 2196 2278 4617805 4617723 3.890000e-20 110.0
203 TraesCS2A01G080200 chr1B 98.182 55 1 0 2782 2836 4617311 4617257 3.030000e-16 97.1
204 TraesCS2A01G080200 chr6D 87.429 175 20 2 3359 3533 450337308 450337480 2.240000e-47 200.0
205 TraesCS2A01G080200 chr6D 95.690 116 4 1 2483 2597 67156419 67156534 6.280000e-43 185.0
206 TraesCS2A01G080200 chr6D 94.167 120 6 1 2478 2597 112344364 112344482 8.120000e-42 182.0
207 TraesCS2A01G080200 chr6D 93.443 122 6 2 2476 2597 81674757 81674638 2.920000e-41 180.0
208 TraesCS2A01G080200 chr6D 95.536 112 5 0 2491 2602 98216271 98216160 2.920000e-41 180.0
209 TraesCS2A01G080200 chr6D 94.783 115 5 1 2483 2597 75829178 75829291 1.050000e-40 178.0
210 TraesCS2A01G080200 chr6D 94.783 115 5 1 2483 2597 334284211 334284324 1.050000e-40 178.0
211 TraesCS2A01G080200 chr6B 97.321 112 3 0 2487 2598 5735005 5734894 1.350000e-44 191.0
212 TraesCS2A01G080200 chr6B 97.273 110 3 0 2488 2597 402180501 402180610 1.750000e-43 187.0
213 TraesCS2A01G080200 chr6B 87.195 164 19 2 3364 3527 683482632 683482793 6.280000e-43 185.0
214 TraesCS2A01G080200 chr4B 96.429 112 4 0 2490 2601 27869492 27869603 6.280000e-43 185.0
215 TraesCS2A01G080200 chr4B 81.000 200 25 11 3364 3554 22447219 22447024 2.960000e-31 147.0
216 TraesCS2A01G080200 chr4B 92.727 55 3 1 2669 2722 144285455 144285509 1.100000e-10 78.7
217 TraesCS2A01G080200 chrUn 96.396 111 3 1 2488 2597 150795947 150796057 8.120000e-42 182.0
218 TraesCS2A01G080200 chrUn 96.296 108 4 0 2490 2597 267451403 267451510 1.050000e-40 178.0
219 TraesCS2A01G080200 chrUn 96.296 108 4 0 2490 2597 340254771 340254878 1.050000e-40 178.0
220 TraesCS2A01G080200 chrUn 96.262 107 4 0 2491 2597 81697126 81697232 3.780000e-40 176.0
221 TraesCS2A01G080200 chrUn 96.262 107 4 0 2491 2597 110700139 110700245 3.780000e-40 176.0
222 TraesCS2A01G080200 chrUn 96.262 107 4 0 2491 2597 143995330 143995224 3.780000e-40 176.0
223 TraesCS2A01G080200 chrUn 95.455 110 5 0 2488 2597 260324737 260324628 3.780000e-40 176.0
224 TraesCS2A01G080200 chrUn 96.262 107 4 0 2491 2597 355880495 355880601 3.780000e-40 176.0
225 TraesCS2A01G080200 chrUn 95.370 108 5 0 2491 2598 37054976 37054869 4.890000e-39 172.0
226 TraesCS2A01G080200 chrUn 95.370 108 5 0 2490 2597 77508813 77508706 4.890000e-39 172.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G080200 chr2A 36200436 36204116 3680 True 6798.000000 6798 100.000000 1 3681 1 chr2A.!!$R1 3680
1 TraesCS2A01G080200 chr2A 80852162 80852805 643 True 617.000000 617 84.615000 40 664 1 chr2A.!!$R2 624
2 TraesCS2A01G080200 chr2A 36233795 36235706 1911 True 475.250000 643 90.328000 881 3351 4 chr2A.!!$R7 2470
3 TraesCS2A01G080200 chr2A 36391613 36392735 1122 True 328.500000 372 86.816500 918 2288 2 chr2A.!!$R8 1370
4 TraesCS2A01G080200 chr2A 36189080 36190731 1651 True 244.050000 457 87.999750 881 3351 4 chr2A.!!$R6 2470
5 TraesCS2A01G080200 chr2B 54885626 54888320 2694 True 790.250000 1323 91.246250 891 3680 4 chr2B.!!$R5 2789
6 TraesCS2A01G080200 chr2B 55030811 55032496 1685 True 383.750000 588 88.903750 1303 3351 4 chr2B.!!$R6 2048
7 TraesCS2A01G080200 chr2B 55209260 55210336 1076 True 323.000000 383 86.743500 918 2288 2 chr2B.!!$R7 1370
8 TraesCS2A01G080200 chr2B 54785594 54787525 1931 True 239.480000 459 91.469400 853 3351 5 chr2B.!!$R4 2498
9 TraesCS2A01G080200 chr2B 55854193 55855106 913 True 208.000000 292 82.080000 2002 3681 2 chr2B.!!$R8 1679
10 TraesCS2A01G080200 chr2D 33047057 33049702 2645 True 675.800000 1142 93.868000 891 3681 5 chr2D.!!$R6 2790
11 TraesCS2A01G080200 chr2D 3048160 3048877 717 True 456.500000 593 88.409000 10 664 2 chr2D.!!$R4 654
12 TraesCS2A01G080200 chr2D 33163419 33165417 1998 True 415.000000 564 87.499600 900 3354 5 chr2D.!!$R7 2454
13 TraesCS2A01G080200 chr2D 33314280 33315479 1199 True 327.500000 357 86.357500 915 2288 2 chr2D.!!$R9 1373
14 TraesCS2A01G080200 chr2D 33373146 33374245 1099 True 327.333333 359 85.382667 936 2286 3 chr2D.!!$R10 1350
15 TraesCS2A01G080200 chr2D 32991255 32994870 3615 True 209.516667 460 90.963167 787 3351 6 chr2D.!!$R5 2564
16 TraesCS2A01G080200 chr5D 442760993 442761669 676 True 771.000000 771 87.794000 10 664 1 chr5D.!!$R1 654
17 TraesCS2A01G080200 chr7A 210563799 210564486 687 False 734.000000 734 86.619000 1 664 1 chr7A.!!$F3 663
18 TraesCS2A01G080200 chr7A 50460815 50461471 656 False 564.000000 564 82.920000 10 664 1 chr7A.!!$F1 654
19 TraesCS2A01G080200 chr7A 78217816 78219926 2110 False 203.800000 316 84.435500 1350 3323 2 chr7A.!!$F5 1973
20 TraesCS2A01G080200 chr1A 86065995 86066635 640 True 654.000000 654 85.780000 40 664 1 chr1A.!!$R2 624
21 TraesCS2A01G080200 chr1D 63669306 63669809 503 False 569.000000 569 87.771000 1 484 1 chr1D.!!$F1 483
22 TraesCS2A01G080200 chr4D 242791720 242792238 518 True 575.000000 575 87.429000 10 508 1 chr4D.!!$R3 498
23 TraesCS2A01G080200 chr5A 656740390 656740892 502 True 560.000000 560 87.747000 10 484 1 chr5A.!!$R4 474
24 TraesCS2A01G080200 chr6A 38435902 38436454 552 False 558.000000 558 85.740000 1 532 1 chr6A.!!$F1 531
25 TraesCS2A01G080200 chr7D 73743652 73745236 1584 False 237.000000 322 84.406000 1350 3499 2 chr7D.!!$F6 2149
26 TraesCS2A01G080200 chr7B 15935581 15936387 806 False 233.000000 340 84.121500 1352 2271 2 chr7B.!!$F8 919

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
485 582 0.037160 TCAAACCGGGACTAAAGGGC 59.963 55.0 6.32 0.0 0.00 5.19 F
687 924 0.107654 GCGTTAGGCTTGGACAGGAT 60.108 55.0 0.00 0.0 39.11 3.24 F
763 1000 0.325933 AGCTACACAAGGCATGCTCA 59.674 50.0 18.92 0.0 0.00 4.26 F
1671 3795 0.693767 CCATCCCCTTGAGAGAGGCT 60.694 60.0 0.00 0.0 35.37 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2332 4804 0.232303 GCAAAGTCTGAACGTCGTGG 59.768 55.0 0.00 0.0 0.00 4.94 R
2448 5718 0.319555 TTGCAGACACCTCGCACTAC 60.320 55.0 0.00 0.0 34.87 2.73 R
2454 5732 0.861837 GAACAGTTGCAGACACCTCG 59.138 55.0 0.00 0.0 0.00 4.63 R
2867 6464 0.107017 ACAACAGCTGCAGACACCTT 60.107 50.0 20.43 0.0 0.00 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 9.667107 TTCTTGAATAAGTAGTTTGACCATAGG 57.333 33.333 0.00 0.00 35.38 2.57
158 164 4.641396 CCTATGGCGGTCAAAATCAGATA 58.359 43.478 0.00 0.00 0.00 1.98
173 179 4.642445 TCAGATACGGATTTTCGTGCTA 57.358 40.909 0.00 0.00 43.70 3.49
248 255 5.910723 AGCCGTTTTACTTTTTCATAACACG 59.089 36.000 0.00 0.00 35.35 4.49
269 279 4.633565 ACGTTTTTGCAAAACATGTCCAAT 59.366 33.333 23.79 3.24 0.00 3.16
271 281 5.451662 CGTTTTTGCAAAACATGTCCAATTG 59.548 36.000 23.79 0.00 0.00 2.32
274 285 6.939132 TTTGCAAAACATGTCCAATTGAAT 57.061 29.167 10.02 0.00 0.00 2.57
406 453 2.991250 TGAGACATGAAGCCCTTTAGC 58.009 47.619 0.00 0.00 0.00 3.09
415 462 1.209523 AGCCCTTTAGCCCCGGTTTA 61.210 55.000 0.00 0.00 0.00 2.01
438 485 1.017701 CACGAACCGGGACTAAAGGC 61.018 60.000 6.32 0.00 28.17 4.35
439 486 1.294138 CGAACCGGGACTAAAGGCA 59.706 57.895 6.32 0.00 0.00 4.75
440 487 1.017701 CGAACCGGGACTAAAGGCAC 61.018 60.000 6.32 0.00 0.00 5.01
442 489 2.133359 AACCGGGACTAAAGGCACCC 62.133 60.000 6.32 0.00 39.02 4.61
443 490 2.298661 CCGGGACTAAAGGCACCCT 61.299 63.158 0.00 0.00 40.12 4.34
457 554 2.294979 GCACCCTTTAATTAGTCCCGG 58.705 52.381 0.00 0.00 0.00 5.73
463 560 4.578928 CCCTTTAATTAGTCCCGGTTCATG 59.421 45.833 0.00 0.00 0.00 3.07
485 582 0.037160 TCAAACCGGGACTAAAGGGC 59.963 55.000 6.32 0.00 0.00 5.19
486 583 0.250989 CAAACCGGGACTAAAGGGCA 60.251 55.000 6.32 0.00 0.00 5.36
487 584 0.702316 AAACCGGGACTAAAGGGCAT 59.298 50.000 6.32 0.00 0.00 4.40
488 585 0.255033 AACCGGGACTAAAGGGCATC 59.745 55.000 6.32 0.00 0.00 3.91
489 586 1.227556 CCGGGACTAAAGGGCATCG 60.228 63.158 0.00 0.00 0.00 3.84
490 587 1.887707 CGGGACTAAAGGGCATCGC 60.888 63.158 0.00 0.00 0.00 4.58
491 588 1.223487 GGGACTAAAGGGCATCGCA 59.777 57.895 0.00 0.00 0.00 5.10
519 616 2.305927 AGTCCCGGTTCATGTCTCAAAT 59.694 45.455 0.00 0.00 0.00 2.32
571 808 0.179045 ATGCCTTTAGCCGCTCGAAT 60.179 50.000 0.00 0.00 42.71 3.34
651 888 0.250640 AGCTGTGACCAAAGCTCTGG 60.251 55.000 3.94 3.94 46.82 3.86
664 901 3.878160 AGCTCTGGTTTCTACTAGTGC 57.122 47.619 5.39 7.38 46.45 4.40
665 902 3.594603 GCTCTGGTTTCTACTAGTGCA 57.405 47.619 5.39 0.00 45.82 4.57
666 903 4.130286 GCTCTGGTTTCTACTAGTGCAT 57.870 45.455 5.39 0.00 45.82 3.96
667 904 3.868077 GCTCTGGTTTCTACTAGTGCATG 59.132 47.826 5.39 0.00 45.82 4.06
668 905 4.437239 CTCTGGTTTCTACTAGTGCATGG 58.563 47.826 5.39 0.00 34.70 3.66
669 906 2.939103 CTGGTTTCTACTAGTGCATGGC 59.061 50.000 5.39 0.00 0.00 4.40
670 907 1.933853 GGTTTCTACTAGTGCATGGCG 59.066 52.381 5.39 0.00 0.00 5.69
671 908 2.618053 GTTTCTACTAGTGCATGGCGT 58.382 47.619 5.39 0.00 0.00 5.68
672 909 3.000727 GTTTCTACTAGTGCATGGCGTT 58.999 45.455 5.39 0.00 0.00 4.84
673 910 4.178540 GTTTCTACTAGTGCATGGCGTTA 58.821 43.478 5.39 0.00 0.00 3.18
674 911 3.710326 TCTACTAGTGCATGGCGTTAG 57.290 47.619 5.39 0.00 0.00 2.34
675 912 2.361119 TCTACTAGTGCATGGCGTTAGG 59.639 50.000 5.39 0.00 0.00 2.69
676 913 0.462047 ACTAGTGCATGGCGTTAGGC 60.462 55.000 0.00 0.00 44.11 3.93
677 914 0.179073 CTAGTGCATGGCGTTAGGCT 60.179 55.000 0.00 0.00 44.18 4.58
678 915 0.251916 TAGTGCATGGCGTTAGGCTT 59.748 50.000 0.00 0.00 44.18 4.35
679 916 1.137404 GTGCATGGCGTTAGGCTTG 59.863 57.895 0.00 4.09 46.33 4.01
680 917 2.045708 TGCATGGCGTTAGGCTTGG 61.046 57.895 0.00 0.00 44.61 3.61
681 918 1.748879 GCATGGCGTTAGGCTTGGA 60.749 57.895 0.00 0.00 44.61 3.53
682 919 1.993369 GCATGGCGTTAGGCTTGGAC 61.993 60.000 0.00 0.00 44.61 4.02
683 920 0.676466 CATGGCGTTAGGCTTGGACA 60.676 55.000 0.00 0.00 42.05 4.02
684 921 0.392998 ATGGCGTTAGGCTTGGACAG 60.393 55.000 0.00 0.00 44.18 3.51
685 922 1.745489 GGCGTTAGGCTTGGACAGG 60.745 63.158 0.00 0.00 42.94 4.00
686 923 1.295423 GCGTTAGGCTTGGACAGGA 59.705 57.895 0.00 0.00 39.11 3.86
687 924 0.107654 GCGTTAGGCTTGGACAGGAT 60.108 55.000 0.00 0.00 39.11 3.24
688 925 1.138266 GCGTTAGGCTTGGACAGGATA 59.862 52.381 0.00 0.00 39.11 2.59
689 926 2.419574 GCGTTAGGCTTGGACAGGATAA 60.420 50.000 0.00 0.00 39.11 1.75
690 927 3.195661 CGTTAGGCTTGGACAGGATAAC 58.804 50.000 0.00 0.00 0.00 1.89
691 928 3.118738 CGTTAGGCTTGGACAGGATAACT 60.119 47.826 0.00 0.00 0.00 2.24
692 929 4.443621 GTTAGGCTTGGACAGGATAACTC 58.556 47.826 0.00 0.00 0.00 3.01
693 930 1.840635 AGGCTTGGACAGGATAACTCC 59.159 52.381 0.00 0.00 42.43 3.85
694 931 1.559682 GGCTTGGACAGGATAACTCCA 59.440 52.381 0.00 0.00 44.79 3.86
695 932 2.173569 GGCTTGGACAGGATAACTCCAT 59.826 50.000 0.00 0.00 44.79 3.41
696 933 3.471680 GCTTGGACAGGATAACTCCATC 58.528 50.000 0.00 0.00 44.79 3.51
697 934 3.135530 GCTTGGACAGGATAACTCCATCT 59.864 47.826 0.00 0.00 44.79 2.90
698 935 4.742138 GCTTGGACAGGATAACTCCATCTC 60.742 50.000 0.00 0.00 44.79 2.75
699 936 3.994317 TGGACAGGATAACTCCATCTCA 58.006 45.455 0.00 0.00 44.79 3.27
700 937 3.706594 TGGACAGGATAACTCCATCTCAC 59.293 47.826 0.00 0.00 44.79 3.51
701 938 3.706594 GGACAGGATAACTCCATCTCACA 59.293 47.826 0.00 0.00 44.79 3.58
702 939 4.346418 GGACAGGATAACTCCATCTCACAT 59.654 45.833 0.00 0.00 44.79 3.21
703 940 5.510520 GGACAGGATAACTCCATCTCACATC 60.511 48.000 0.00 0.00 44.79 3.06
704 941 4.964897 ACAGGATAACTCCATCTCACATCA 59.035 41.667 0.00 0.00 44.79 3.07
705 942 5.163364 ACAGGATAACTCCATCTCACATCAC 60.163 44.000 0.00 0.00 44.79 3.06
706 943 4.964897 AGGATAACTCCATCTCACATCACA 59.035 41.667 0.00 0.00 44.79 3.58
707 944 5.053145 GGATAACTCCATCTCACATCACAC 58.947 45.833 0.00 0.00 41.64 3.82
708 945 5.395657 GGATAACTCCATCTCACATCACACA 60.396 44.000 0.00 0.00 41.64 3.72
709 946 4.356405 AACTCCATCTCACATCACACAA 57.644 40.909 0.00 0.00 0.00 3.33
710 947 4.564782 ACTCCATCTCACATCACACAAT 57.435 40.909 0.00 0.00 0.00 2.71
711 948 4.914983 ACTCCATCTCACATCACACAATT 58.085 39.130 0.00 0.00 0.00 2.32
712 949 6.053632 ACTCCATCTCACATCACACAATTA 57.946 37.500 0.00 0.00 0.00 1.40
713 950 6.656902 ACTCCATCTCACATCACACAATTAT 58.343 36.000 0.00 0.00 0.00 1.28
714 951 6.541278 ACTCCATCTCACATCACACAATTATG 59.459 38.462 0.00 0.00 0.00 1.90
715 952 6.652053 TCCATCTCACATCACACAATTATGA 58.348 36.000 0.00 0.00 0.00 2.15
716 953 7.111466 TCCATCTCACATCACACAATTATGAA 58.889 34.615 0.00 0.00 0.00 2.57
717 954 7.611079 TCCATCTCACATCACACAATTATGAAA 59.389 33.333 0.00 0.00 0.00 2.69
718 955 7.699391 CCATCTCACATCACACAATTATGAAAC 59.301 37.037 0.00 0.00 0.00 2.78
719 956 7.742556 TCTCACATCACACAATTATGAAACA 57.257 32.000 0.00 0.00 0.00 2.83
720 957 8.164058 TCTCACATCACACAATTATGAAACAA 57.836 30.769 0.00 0.00 0.00 2.83
721 958 8.795513 TCTCACATCACACAATTATGAAACAAT 58.204 29.630 0.00 0.00 0.00 2.71
722 959 9.414295 CTCACATCACACAATTATGAAACAATT 57.586 29.630 0.00 0.00 0.00 2.32
723 960 9.194271 TCACATCACACAATTATGAAACAATTG 57.806 29.630 3.24 3.24 45.01 2.32
724 961 9.194271 CACATCACACAATTATGAAACAATTGA 57.806 29.630 13.59 0.00 43.14 2.57
725 962 9.761504 ACATCACACAATTATGAAACAATTGAA 57.238 25.926 13.59 0.00 43.14 2.69
739 976 9.891828 TGAAACAATTGAATAACTACACATCAC 57.108 29.630 13.59 0.00 0.00 3.06
740 977 9.891828 GAAACAATTGAATAACTACACATCACA 57.108 29.630 13.59 0.00 0.00 3.58
741 978 9.897744 AAACAATTGAATAACTACACATCACAG 57.102 29.630 13.59 0.00 0.00 3.66
742 979 8.621532 ACAATTGAATAACTACACATCACAGT 57.378 30.769 13.59 0.00 0.00 3.55
743 980 9.066892 ACAATTGAATAACTACACATCACAGTT 57.933 29.630 13.59 0.00 36.51 3.16
746 983 7.827819 TGAATAACTACACATCACAGTTAGC 57.172 36.000 0.00 0.00 37.97 3.09
747 984 7.611770 TGAATAACTACACATCACAGTTAGCT 58.388 34.615 0.00 0.00 37.97 3.32
748 985 8.745590 TGAATAACTACACATCACAGTTAGCTA 58.254 33.333 0.00 0.00 37.97 3.32
749 986 8.928270 AATAACTACACATCACAGTTAGCTAC 57.072 34.615 0.00 0.00 37.97 3.58
750 987 5.977489 ACTACACATCACAGTTAGCTACA 57.023 39.130 0.00 0.00 0.00 2.74
751 988 5.710984 ACTACACATCACAGTTAGCTACAC 58.289 41.667 0.00 0.00 0.00 2.90
752 989 4.600692 ACACATCACAGTTAGCTACACA 57.399 40.909 0.00 0.00 0.00 3.72
753 990 4.956085 ACACATCACAGTTAGCTACACAA 58.044 39.130 0.00 0.00 0.00 3.33
754 991 4.991056 ACACATCACAGTTAGCTACACAAG 59.009 41.667 0.00 0.00 0.00 3.16
755 992 4.389992 CACATCACAGTTAGCTACACAAGG 59.610 45.833 0.00 0.00 0.00 3.61
756 993 3.040147 TCACAGTTAGCTACACAAGGC 57.960 47.619 0.00 0.00 0.00 4.35
757 994 2.367241 TCACAGTTAGCTACACAAGGCA 59.633 45.455 0.00 0.00 0.00 4.75
758 995 3.007940 TCACAGTTAGCTACACAAGGCAT 59.992 43.478 0.00 0.00 0.00 4.40
759 996 3.125829 CACAGTTAGCTACACAAGGCATG 59.874 47.826 0.00 0.00 0.00 4.06
760 997 2.096496 CAGTTAGCTACACAAGGCATGC 59.904 50.000 9.90 9.90 0.00 4.06
761 998 2.026822 AGTTAGCTACACAAGGCATGCT 60.027 45.455 18.92 0.11 34.92 3.79
762 999 2.315925 TAGCTACACAAGGCATGCTC 57.684 50.000 18.92 7.89 32.72 4.26
763 1000 0.325933 AGCTACACAAGGCATGCTCA 59.674 50.000 18.92 0.00 0.00 4.26
764 1001 1.167851 GCTACACAAGGCATGCTCAA 58.832 50.000 18.92 0.00 0.00 3.02
765 1002 1.541147 GCTACACAAGGCATGCTCAAA 59.459 47.619 18.92 0.00 0.00 2.69
766 1003 2.165030 GCTACACAAGGCATGCTCAAAT 59.835 45.455 18.92 1.95 0.00 2.32
767 1004 3.378112 GCTACACAAGGCATGCTCAAATA 59.622 43.478 18.92 3.07 0.00 1.40
768 1005 4.037208 GCTACACAAGGCATGCTCAAATAT 59.963 41.667 18.92 0.93 0.00 1.28
769 1006 5.239306 GCTACACAAGGCATGCTCAAATATA 59.761 40.000 18.92 2.10 0.00 0.86
770 1007 5.505173 ACACAAGGCATGCTCAAATATAC 57.495 39.130 18.92 0.00 0.00 1.47
771 1008 5.195940 ACACAAGGCATGCTCAAATATACT 58.804 37.500 18.92 0.00 0.00 2.12
772 1009 6.356556 ACACAAGGCATGCTCAAATATACTA 58.643 36.000 18.92 0.00 0.00 1.82
773 1010 6.828273 ACACAAGGCATGCTCAAATATACTAA 59.172 34.615 18.92 0.00 0.00 2.24
774 1011 7.339212 ACACAAGGCATGCTCAAATATACTAAA 59.661 33.333 18.92 0.00 0.00 1.85
775 1012 8.190122 CACAAGGCATGCTCAAATATACTAAAA 58.810 33.333 18.92 0.00 0.00 1.52
776 1013 8.408601 ACAAGGCATGCTCAAATATACTAAAAG 58.591 33.333 18.92 0.00 0.00 2.27
777 1014 7.516198 AGGCATGCTCAAATATACTAAAAGG 57.484 36.000 18.92 0.00 0.00 3.11
778 1015 7.062957 AGGCATGCTCAAATATACTAAAAGGT 58.937 34.615 18.92 0.00 0.00 3.50
779 1016 7.561356 AGGCATGCTCAAATATACTAAAAGGTT 59.439 33.333 18.92 0.00 0.00 3.50
780 1017 7.649306 GGCATGCTCAAATATACTAAAAGGTTG 59.351 37.037 18.92 0.00 0.00 3.77
781 1018 8.405531 GCATGCTCAAATATACTAAAAGGTTGA 58.594 33.333 11.37 0.00 0.00 3.18
782 1019 9.941664 CATGCTCAAATATACTAAAAGGTTGAG 57.058 33.333 6.21 6.21 42.06 3.02
783 1020 9.686683 ATGCTCAAATATACTAAAAGGTTGAGT 57.313 29.630 11.03 0.00 41.50 3.41
805 1042 9.554395 TGAGTAAATGAAATCAGACTAACACAA 57.446 29.630 0.00 0.00 0.00 3.33
813 1050 8.100164 TGAAATCAGACTAACACAATGTGGATA 58.900 33.333 18.37 9.31 37.94 2.59
848 1085 1.301479 GAACACCACACCGGGAGAC 60.301 63.158 6.32 0.00 40.22 3.36
851 1088 1.147376 CACCACACCGGGAGACAAA 59.853 57.895 6.32 0.00 40.22 2.83
968 3041 0.755327 AACCACCTCAACCAACAGCC 60.755 55.000 0.00 0.00 0.00 4.85
1671 3795 0.693767 CCATCCCCTTGAGAGAGGCT 60.694 60.000 0.00 0.00 35.37 4.58
1732 3864 2.493278 CCATGACCCGCTTCTTGAATTT 59.507 45.455 0.00 0.00 0.00 1.82
1743 3904 5.400485 CGCTTCTTGAATTTCTTTCAGTTGG 59.600 40.000 0.00 0.00 44.90 3.77
1805 4060 2.745884 CGCCCAAGATTCACGCCA 60.746 61.111 0.00 0.00 0.00 5.69
1810 4065 1.671054 CAAGATTCACGCCACGGGT 60.671 57.895 0.00 0.00 0.00 5.28
1944 4254 3.708195 GCGAATTGCAGTTGCTGAT 57.292 47.368 0.00 0.00 45.45 2.90
1945 4255 1.542544 GCGAATTGCAGTTGCTGATC 58.457 50.000 0.00 0.00 45.45 2.92
1946 4256 1.806511 CGAATTGCAGTTGCTGATCG 58.193 50.000 0.00 8.27 42.66 3.69
1947 4257 1.394572 CGAATTGCAGTTGCTGATCGA 59.605 47.619 15.57 0.00 42.66 3.59
1956 4332 1.662629 GTTGCTGATCGACATGGACTG 59.337 52.381 0.00 0.00 0.00 3.51
2320 4792 3.872771 GTGAAAACCGGTAGTCTTTGACA 59.127 43.478 8.00 0.00 34.60 3.58
2322 4794 2.165319 AACCGGTAGTCTTTGACAGC 57.835 50.000 8.00 0.00 34.60 4.40
2330 4802 5.505654 CGGTAGTCTTTGACAGCATTTGTTT 60.506 40.000 0.46 0.00 41.05 2.83
2332 4804 6.417930 GGTAGTCTTTGACAGCATTTGTTTTC 59.582 38.462 0.46 0.00 41.05 2.29
2391 4929 5.116180 TGTTGTGGTCTGAAGAACAGTTAG 58.884 41.667 0.00 0.00 43.28 2.34
2396 4934 5.992217 GTGGTCTGAAGAACAGTTAGTGAAT 59.008 40.000 0.00 0.00 43.28 2.57
2402 4940 8.612619 TCTGAAGAACAGTTAGTGAATTTGTTC 58.387 33.333 8.28 8.28 45.86 3.18
2403 4941 7.703328 TGAAGAACAGTTAGTGAATTTGTTCC 58.297 34.615 11.46 1.74 45.30 3.62
2415 4986 7.260603 AGTGAATTTGTTCCAAGTCTGAAAAG 58.739 34.615 0.00 0.00 0.00 2.27
2432 5345 7.332926 GTCTGAAAAGCAGTTATCTGAATCTGA 59.667 37.037 4.94 0.00 45.14 3.27
2454 5732 5.412594 TGATGAAATCTGAAACTGGTAGTGC 59.587 40.000 0.00 0.00 45.81 4.40
2503 5788 5.128919 TGTAGATAAGTACTCCCTCCGTTC 58.871 45.833 0.00 0.00 0.00 3.95
2505 5790 1.755179 TAAGTACTCCCTCCGTTCGG 58.245 55.000 4.74 4.74 0.00 4.30
2506 5791 0.038744 AAGTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
2516 5826 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
2518 5828 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
2520 5830 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
2526 5836 4.923871 CGGAATTACTTGTCTCGGATATGG 59.076 45.833 0.00 0.00 0.00 2.74
2527 5837 5.278808 CGGAATTACTTGTCTCGGATATGGA 60.279 44.000 0.00 0.00 0.00 3.41
2533 5915 6.274157 ACTTGTCTCGGATATGGATGTATC 57.726 41.667 0.00 0.00 0.00 2.24
2534 5916 6.013379 ACTTGTCTCGGATATGGATGTATCT 58.987 40.000 0.00 0.00 32.78 1.98
2536 5918 7.338196 ACTTGTCTCGGATATGGATGTATCTAG 59.662 40.741 0.00 0.00 32.78 2.43
2537 5919 6.958767 TGTCTCGGATATGGATGTATCTAGA 58.041 40.000 0.00 0.00 32.78 2.43
2569 5951 9.664332 AATACATCTAGATACATCCATTTCTGC 57.336 33.333 4.54 0.00 0.00 4.26
2572 5954 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
2573 5955 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
2576 5958 5.824624 AGATACATCCATTTCTGCGACAAAT 59.175 36.000 0.00 0.00 0.00 2.32
2577 5959 6.992123 AGATACATCCATTTCTGCGACAAATA 59.008 34.615 0.00 0.00 0.00 1.40
2578 5960 5.895636 ACATCCATTTCTGCGACAAATAA 57.104 34.783 0.00 0.00 0.00 1.40
2579 5961 6.455360 ACATCCATTTCTGCGACAAATAAT 57.545 33.333 0.00 0.00 0.00 1.28
2580 5962 6.866480 ACATCCATTTCTGCGACAAATAATT 58.134 32.000 0.00 0.00 0.00 1.40
2581 5963 6.974622 ACATCCATTTCTGCGACAAATAATTC 59.025 34.615 0.00 0.00 0.00 2.17
2582 5964 5.890334 TCCATTTCTGCGACAAATAATTCC 58.110 37.500 0.00 0.00 0.00 3.01
2583 5965 4.734854 CCATTTCTGCGACAAATAATTCCG 59.265 41.667 0.00 0.00 0.00 4.30
2584 5966 5.448496 CCATTTCTGCGACAAATAATTCCGA 60.448 40.000 0.00 0.00 0.00 4.55
2606 6201 3.436243 ACAGAGGGAGTAACAGAGAAGG 58.564 50.000 0.00 0.00 0.00 3.46
2670 6267 9.522804 GTGTTGAATAACCTGTGAACAAATTTA 57.477 29.630 0.00 0.00 35.92 1.40
2671 6268 9.743057 TGTTGAATAACCTGTGAACAAATTTAG 57.257 29.630 0.00 0.00 35.92 1.85
2672 6269 9.191995 GTTGAATAACCTGTGAACAAATTTAGG 57.808 33.333 1.59 1.59 0.00 2.69
2673 6270 8.698973 TGAATAACCTGTGAACAAATTTAGGA 57.301 30.769 9.01 0.00 0.00 2.94
2674 6271 8.573035 TGAATAACCTGTGAACAAATTTAGGAC 58.427 33.333 9.01 0.00 0.00 3.85
2675 6272 8.706322 AATAACCTGTGAACAAATTTAGGACT 57.294 30.769 9.01 0.18 0.00 3.85
2676 6273 8.706322 ATAACCTGTGAACAAATTTAGGACTT 57.294 30.769 9.01 0.00 0.00 3.01
2677 6274 7.418337 AACCTGTGAACAAATTTAGGACTTT 57.582 32.000 9.01 0.00 0.00 2.66
2678 6275 6.805713 ACCTGTGAACAAATTTAGGACTTTG 58.194 36.000 9.01 0.00 38.13 2.77
2679 6276 6.183360 ACCTGTGAACAAATTTAGGACTTTGG 60.183 38.462 9.01 1.20 36.81 3.28
2680 6277 6.040391 CCTGTGAACAAATTTAGGACTTTGGA 59.960 38.462 0.00 0.00 36.81 3.53
2681 6278 7.038154 TGTGAACAAATTTAGGACTTTGGAG 57.962 36.000 0.00 0.00 36.81 3.86
2682 6279 6.605594 TGTGAACAAATTTAGGACTTTGGAGT 59.394 34.615 0.00 0.00 36.81 3.85
2683 6280 7.123547 TGTGAACAAATTTAGGACTTTGGAGTT 59.876 33.333 0.00 0.00 36.81 3.01
2684 6281 7.435192 GTGAACAAATTTAGGACTTTGGAGTTG 59.565 37.037 0.00 0.00 36.81 3.16
2685 6282 7.123547 TGAACAAATTTAGGACTTTGGAGTTGT 59.876 33.333 0.00 0.00 36.81 3.32
2686 6283 7.039313 ACAAATTTAGGACTTTGGAGTTGTC 57.961 36.000 0.00 0.00 36.81 3.18
2687 6284 6.833933 ACAAATTTAGGACTTTGGAGTTGTCT 59.166 34.615 0.00 0.00 36.81 3.41
2688 6285 7.996644 ACAAATTTAGGACTTTGGAGTTGTCTA 59.003 33.333 0.00 0.00 36.81 2.59
2689 6286 8.846211 CAAATTTAGGACTTTGGAGTTGTCTAA 58.154 33.333 0.00 0.00 35.88 2.10
2690 6287 8.990163 AATTTAGGACTTTGGAGTTGTCTAAA 57.010 30.769 0.00 0.00 37.45 1.85
2691 6288 8.990163 ATTTAGGACTTTGGAGTTGTCTAAAA 57.010 30.769 0.00 0.00 37.09 1.52
2692 6289 7.797038 TTAGGACTTTGGAGTTGTCTAAAAC 57.203 36.000 0.00 0.00 35.88 2.43
2693 6290 6.002653 AGGACTTTGGAGTTGTCTAAAACT 57.997 37.500 0.00 0.00 43.08 2.66
2694 6291 5.823045 AGGACTTTGGAGTTGTCTAAAACTG 59.177 40.000 0.00 0.00 40.48 3.16
2695 6292 5.589050 GGACTTTGGAGTTGTCTAAAACTGT 59.411 40.000 0.00 0.00 40.48 3.55
2696 6293 6.095021 GGACTTTGGAGTTGTCTAAAACTGTT 59.905 38.462 0.00 0.00 40.48 3.16
2697 6294 6.852664 ACTTTGGAGTTGTCTAAAACTGTTG 58.147 36.000 0.00 0.00 40.48 3.33
2698 6295 6.433093 ACTTTGGAGTTGTCTAAAACTGTTGT 59.567 34.615 0.00 0.00 40.48 3.32
2699 6296 7.608761 ACTTTGGAGTTGTCTAAAACTGTTGTA 59.391 33.333 0.00 0.00 40.48 2.41
2700 6297 7.548196 TTGGAGTTGTCTAAAACTGTTGTAG 57.452 36.000 10.86 10.86 40.48 2.74
2701 6298 6.646267 TGGAGTTGTCTAAAACTGTTGTAGT 58.354 36.000 15.51 0.00 40.48 2.73
2702 6299 6.759827 TGGAGTTGTCTAAAACTGTTGTAGTC 59.240 38.462 15.51 11.52 40.48 2.59
2703 6300 6.985059 GGAGTTGTCTAAAACTGTTGTAGTCT 59.015 38.462 15.51 10.60 40.48 3.24
2704 6301 7.494952 GGAGTTGTCTAAAACTGTTGTAGTCTT 59.505 37.037 15.51 0.00 40.48 3.01
2705 6302 8.197988 AGTTGTCTAAAACTGTTGTAGTCTTG 57.802 34.615 15.51 0.00 39.18 3.02
2706 6303 7.822822 AGTTGTCTAAAACTGTTGTAGTCTTGT 59.177 33.333 15.51 0.05 39.18 3.16
2707 6304 9.090692 GTTGTCTAAAACTGTTGTAGTCTTGTA 57.909 33.333 15.51 0.00 39.18 2.41
2708 6305 8.867112 TGTCTAAAACTGTTGTAGTCTTGTAG 57.133 34.615 15.51 0.00 39.18 2.74
2709 6306 8.689061 TGTCTAAAACTGTTGTAGTCTTGTAGA 58.311 33.333 15.51 0.00 39.18 2.59
2710 6307 9.525409 GTCTAAAACTGTTGTAGTCTTGTAGAA 57.475 33.333 15.51 0.00 39.18 2.10
2714 6311 8.788325 AAACTGTTGTAGTCTTGTAGAAAAGT 57.212 30.769 0.00 0.00 39.18 2.66
2715 6312 9.880157 AAACTGTTGTAGTCTTGTAGAAAAGTA 57.120 29.630 0.00 0.00 39.18 2.24
2716 6313 9.880157 AACTGTTGTAGTCTTGTAGAAAAGTAA 57.120 29.630 0.00 0.00 39.18 2.24
2717 6314 9.880157 ACTGTTGTAGTCTTGTAGAAAAGTAAA 57.120 29.630 0.00 0.00 33.17 2.01
2730 6327 9.280174 TGTAGAAAAGTAAAAGTAGTTGGATGG 57.720 33.333 0.00 0.00 0.00 3.51
2731 6328 9.498176 GTAGAAAAGTAAAAGTAGTTGGATGGA 57.502 33.333 0.00 0.00 0.00 3.41
2732 6329 8.990163 AGAAAAGTAAAAGTAGTTGGATGGAA 57.010 30.769 0.00 0.00 0.00 3.53
2733 6330 9.416284 AGAAAAGTAAAAGTAGTTGGATGGAAA 57.584 29.630 0.00 0.00 0.00 3.13
2742 6339 9.981460 AAAGTAGTTGGATGGAAATAGATTTCT 57.019 29.630 13.29 0.00 44.21 2.52
2743 6340 9.620259 AAGTAGTTGGATGGAAATAGATTTCTC 57.380 33.333 13.29 5.61 44.21 2.87
2744 6341 8.772250 AGTAGTTGGATGGAAATAGATTTCTCA 58.228 33.333 13.29 10.35 44.21 3.27
2745 6342 9.050601 GTAGTTGGATGGAAATAGATTTCTCAG 57.949 37.037 13.29 0.00 44.21 3.35
2746 6343 7.637511 AGTTGGATGGAAATAGATTTCTCAGT 58.362 34.615 13.29 0.26 44.21 3.41
2747 6344 8.112183 AGTTGGATGGAAATAGATTTCTCAGTT 58.888 33.333 13.29 0.00 44.21 3.16
2748 6345 8.743714 GTTGGATGGAAATAGATTTCTCAGTTT 58.256 33.333 13.29 0.00 44.21 2.66
2749 6346 8.284945 TGGATGGAAATAGATTTCTCAGTTTG 57.715 34.615 13.29 0.00 44.21 2.93
2750 6347 7.890127 TGGATGGAAATAGATTTCTCAGTTTGT 59.110 33.333 13.29 0.00 44.21 2.83
2751 6348 8.186821 GGATGGAAATAGATTTCTCAGTTTGTG 58.813 37.037 13.29 0.00 44.21 3.33
2752 6349 8.641498 ATGGAAATAGATTTCTCAGTTTGTGT 57.359 30.769 13.29 0.00 44.21 3.72
2753 6350 9.739276 ATGGAAATAGATTTCTCAGTTTGTGTA 57.261 29.630 13.29 0.00 44.21 2.90
2754 6351 9.567776 TGGAAATAGATTTCTCAGTTTGTGTAA 57.432 29.630 13.29 0.00 44.21 2.41
2761 6358 9.388506 AGATTTCTCAGTTTGTGTAATAGATGG 57.611 33.333 0.00 0.00 0.00 3.51
2762 6359 9.167311 GATTTCTCAGTTTGTGTAATAGATGGT 57.833 33.333 0.00 0.00 0.00 3.55
2763 6360 8.547967 TTTCTCAGTTTGTGTAATAGATGGTC 57.452 34.615 0.00 0.00 0.00 4.02
2764 6361 7.482169 TCTCAGTTTGTGTAATAGATGGTCT 57.518 36.000 0.00 0.00 0.00 3.85
2765 6362 7.323420 TCTCAGTTTGTGTAATAGATGGTCTG 58.677 38.462 0.00 0.00 0.00 3.51
2766 6363 7.178451 TCTCAGTTTGTGTAATAGATGGTCTGA 59.822 37.037 0.00 0.00 0.00 3.27
2767 6364 7.676004 TCAGTTTGTGTAATAGATGGTCTGAA 58.324 34.615 0.00 0.00 0.00 3.02
2768 6365 7.819415 TCAGTTTGTGTAATAGATGGTCTGAAG 59.181 37.037 0.00 0.00 0.00 3.02
2769 6366 6.595716 AGTTTGTGTAATAGATGGTCTGAAGC 59.404 38.462 0.00 0.00 0.00 3.86
2770 6367 5.939764 TGTGTAATAGATGGTCTGAAGCT 57.060 39.130 0.00 0.00 0.00 3.74
2771 6368 7.418337 TTGTGTAATAGATGGTCTGAAGCTA 57.582 36.000 0.00 0.00 0.00 3.32
2772 6369 7.043961 TGTGTAATAGATGGTCTGAAGCTAG 57.956 40.000 0.00 0.00 0.00 3.42
2773 6370 6.607600 TGTGTAATAGATGGTCTGAAGCTAGT 59.392 38.462 0.00 0.00 0.00 2.57
2774 6371 7.124298 TGTGTAATAGATGGTCTGAAGCTAGTT 59.876 37.037 0.00 0.00 0.00 2.24
2775 6372 7.436673 GTGTAATAGATGGTCTGAAGCTAGTTG 59.563 40.741 0.00 0.00 0.00 3.16
2776 6373 3.258971 AGATGGTCTGAAGCTAGTTGC 57.741 47.619 0.00 0.00 43.29 4.17
2777 6374 2.568956 AGATGGTCTGAAGCTAGTTGCA 59.431 45.455 0.00 0.00 45.94 4.08
2778 6375 2.462456 TGGTCTGAAGCTAGTTGCAG 57.538 50.000 8.27 8.27 45.94 4.41
2779 6376 1.970640 TGGTCTGAAGCTAGTTGCAGA 59.029 47.619 13.02 13.02 45.94 4.26
2780 6377 2.568956 TGGTCTGAAGCTAGTTGCAGAT 59.431 45.455 19.23 0.00 45.94 2.90
2781 6378 3.008375 TGGTCTGAAGCTAGTTGCAGATT 59.992 43.478 19.23 0.00 45.94 2.40
2782 6379 4.006319 GGTCTGAAGCTAGTTGCAGATTT 58.994 43.478 19.23 0.00 45.94 2.17
2783 6380 4.094146 GGTCTGAAGCTAGTTGCAGATTTC 59.906 45.833 19.23 7.67 45.94 2.17
2784 6381 4.692625 GTCTGAAGCTAGTTGCAGATTTCA 59.307 41.667 19.23 0.00 45.94 2.69
2785 6382 4.934001 TCTGAAGCTAGTTGCAGATTTCAG 59.066 41.667 13.02 15.38 45.94 3.02
2786 6383 4.645535 TGAAGCTAGTTGCAGATTTCAGT 58.354 39.130 0.00 0.00 45.94 3.41
2787 6384 4.692625 TGAAGCTAGTTGCAGATTTCAGTC 59.307 41.667 0.00 0.00 45.94 3.51
2788 6385 4.277515 AGCTAGTTGCAGATTTCAGTCA 57.722 40.909 0.00 0.00 45.94 3.41
2789 6386 4.841422 AGCTAGTTGCAGATTTCAGTCAT 58.159 39.130 0.00 0.00 45.94 3.06
2790 6387 4.874966 AGCTAGTTGCAGATTTCAGTCATC 59.125 41.667 0.00 0.00 45.94 2.92
2791 6388 4.874966 GCTAGTTGCAGATTTCAGTCATCT 59.125 41.667 0.00 0.00 42.31 2.90
2792 6389 5.006552 GCTAGTTGCAGATTTCAGTCATCTC 59.993 44.000 0.00 0.00 42.31 2.75
2793 6390 4.903054 AGTTGCAGATTTCAGTCATCTCA 58.097 39.130 0.00 0.00 0.00 3.27
2794 6391 5.498393 AGTTGCAGATTTCAGTCATCTCAT 58.502 37.500 0.00 0.00 0.00 2.90
2795 6392 5.944599 AGTTGCAGATTTCAGTCATCTCATT 59.055 36.000 0.00 0.00 0.00 2.57
2796 6393 6.433404 AGTTGCAGATTTCAGTCATCTCATTT 59.567 34.615 0.00 0.00 0.00 2.32
2797 6394 6.432607 TGCAGATTTCAGTCATCTCATTTC 57.567 37.500 0.00 0.00 0.00 2.17
2798 6395 5.941647 TGCAGATTTCAGTCATCTCATTTCA 59.058 36.000 0.00 0.00 0.00 2.69
2799 6396 6.128090 TGCAGATTTCAGTCATCTCATTTCAC 60.128 38.462 0.00 0.00 0.00 3.18
2800 6397 6.677431 GCAGATTTCAGTCATCTCATTTCACC 60.677 42.308 0.00 0.00 0.00 4.02
2801 6398 6.598457 CAGATTTCAGTCATCTCATTTCACCT 59.402 38.462 0.00 0.00 0.00 4.00
2802 6399 7.120873 CAGATTTCAGTCATCTCATTTCACCTT 59.879 37.037 0.00 0.00 0.00 3.50
2803 6400 6.564709 TTTCAGTCATCTCATTTCACCTTG 57.435 37.500 0.00 0.00 0.00 3.61
2804 6401 4.582869 TCAGTCATCTCATTTCACCTTGG 58.417 43.478 0.00 0.00 0.00 3.61
2805 6402 3.128242 CAGTCATCTCATTTCACCTTGGC 59.872 47.826 0.00 0.00 0.00 4.52
2806 6403 3.084039 GTCATCTCATTTCACCTTGGCA 58.916 45.455 0.00 0.00 0.00 4.92
2807 6404 3.507233 GTCATCTCATTTCACCTTGGCAA 59.493 43.478 0.00 0.00 0.00 4.52
2808 6405 4.022068 GTCATCTCATTTCACCTTGGCAAA 60.022 41.667 0.00 0.00 0.00 3.68
2809 6406 4.219070 TCATCTCATTTCACCTTGGCAAAG 59.781 41.667 0.00 0.00 0.00 2.77
2810 6407 3.831323 TCTCATTTCACCTTGGCAAAGA 58.169 40.909 1.11 0.00 35.19 2.52
2811 6408 4.214310 TCTCATTTCACCTTGGCAAAGAA 58.786 39.130 1.11 4.24 35.19 2.52
2812 6409 4.279169 TCTCATTTCACCTTGGCAAAGAAG 59.721 41.667 1.11 0.00 35.19 2.85
2813 6410 4.214310 TCATTTCACCTTGGCAAAGAAGA 58.786 39.130 1.11 0.00 35.19 2.87
2814 6411 4.834496 TCATTTCACCTTGGCAAAGAAGAT 59.166 37.500 1.11 2.10 35.19 2.40
2815 6412 6.009589 TCATTTCACCTTGGCAAAGAAGATA 58.990 36.000 1.11 0.00 35.19 1.98
2816 6413 5.705609 TTTCACCTTGGCAAAGAAGATAC 57.294 39.130 1.11 0.00 35.19 2.24
2817 6414 4.640771 TCACCTTGGCAAAGAAGATACT 57.359 40.909 1.11 0.00 35.19 2.12
2818 6415 5.755409 TCACCTTGGCAAAGAAGATACTA 57.245 39.130 1.11 0.00 35.19 1.82
2819 6416 6.121776 TCACCTTGGCAAAGAAGATACTAA 57.878 37.500 1.11 0.00 35.19 2.24
2820 6417 6.721318 TCACCTTGGCAAAGAAGATACTAAT 58.279 36.000 1.11 0.00 35.19 1.73
2821 6418 7.175104 TCACCTTGGCAAAGAAGATACTAATT 58.825 34.615 1.11 0.00 35.19 1.40
2822 6419 7.669722 TCACCTTGGCAAAGAAGATACTAATTT 59.330 33.333 1.11 0.00 35.19 1.82
2823 6420 8.306761 CACCTTGGCAAAGAAGATACTAATTTT 58.693 33.333 1.11 0.00 35.19 1.82
2824 6421 8.523658 ACCTTGGCAAAGAAGATACTAATTTTC 58.476 33.333 1.11 0.00 35.19 2.29
2825 6422 8.743714 CCTTGGCAAAGAAGATACTAATTTTCT 58.256 33.333 1.11 0.00 37.98 2.52
2845 6442 8.925161 TTTTCTAAACTGTGAAAATTCAGGTG 57.075 30.769 0.00 0.00 37.28 4.00
2846 6443 6.633500 TCTAAACTGTGAAAATTCAGGTGG 57.367 37.500 0.00 0.00 37.98 4.61
2847 6444 6.126409 TCTAAACTGTGAAAATTCAGGTGGT 58.874 36.000 0.00 0.00 37.98 4.16
2848 6445 7.284074 TCTAAACTGTGAAAATTCAGGTGGTA 58.716 34.615 0.00 0.00 37.98 3.25
2849 6446 5.767816 AACTGTGAAAATTCAGGTGGTAC 57.232 39.130 0.00 0.00 37.98 3.34
2850 6447 4.142038 ACTGTGAAAATTCAGGTGGTACC 58.858 43.478 4.43 4.43 37.98 3.34
2860 6457 3.414486 GGTGGTACCTTGCAACTGT 57.586 52.632 14.36 0.00 34.73 3.55
2861 6458 1.687563 GGTGGTACCTTGCAACTGTT 58.312 50.000 14.36 0.00 34.73 3.16
2862 6459 2.853705 GGTGGTACCTTGCAACTGTTA 58.146 47.619 14.36 0.00 34.73 2.41
2863 6460 2.812011 GGTGGTACCTTGCAACTGTTAG 59.188 50.000 14.36 0.00 34.73 2.34
2864 6461 3.473625 GTGGTACCTTGCAACTGTTAGT 58.526 45.455 14.36 0.00 0.00 2.24
2865 6462 3.250040 GTGGTACCTTGCAACTGTTAGTG 59.750 47.826 14.36 0.00 0.00 2.74
2866 6463 3.118186 TGGTACCTTGCAACTGTTAGTGT 60.118 43.478 14.36 0.00 0.00 3.55
2867 6464 4.101274 TGGTACCTTGCAACTGTTAGTGTA 59.899 41.667 14.36 0.00 0.00 2.90
2868 6465 5.058490 GGTACCTTGCAACTGTTAGTGTAA 58.942 41.667 4.06 0.00 0.00 2.41
2869 6466 5.178809 GGTACCTTGCAACTGTTAGTGTAAG 59.821 44.000 4.06 0.00 0.00 2.34
2870 6467 4.134563 ACCTTGCAACTGTTAGTGTAAGG 58.865 43.478 19.72 19.72 40.79 2.69
2871 6468 4.134563 CCTTGCAACTGTTAGTGTAAGGT 58.865 43.478 15.51 0.00 36.00 3.50
2872 6469 4.024048 CCTTGCAACTGTTAGTGTAAGGTG 60.024 45.833 15.51 0.00 36.00 4.00
2873 6470 4.145365 TGCAACTGTTAGTGTAAGGTGT 57.855 40.909 0.00 0.00 31.05 4.16
2874 6471 4.124238 TGCAACTGTTAGTGTAAGGTGTC 58.876 43.478 0.00 0.00 31.05 3.67
2875 6472 4.141801 TGCAACTGTTAGTGTAAGGTGTCT 60.142 41.667 0.00 0.00 31.05 3.41
2876 6473 4.211374 GCAACTGTTAGTGTAAGGTGTCTG 59.789 45.833 0.00 0.00 31.05 3.51
2877 6474 3.991367 ACTGTTAGTGTAAGGTGTCTGC 58.009 45.455 0.00 0.00 0.00 4.26
2878 6475 3.386726 ACTGTTAGTGTAAGGTGTCTGCA 59.613 43.478 0.00 0.00 0.00 4.41
2879 6476 3.990092 TGTTAGTGTAAGGTGTCTGCAG 58.010 45.455 7.63 7.63 0.00 4.41
2880 6477 2.737252 GTTAGTGTAAGGTGTCTGCAGC 59.263 50.000 9.47 4.92 42.96 5.25
2886 6483 4.147701 GGTGTCTGCAGCTGTTGT 57.852 55.556 16.64 0.00 39.79 3.32
2887 6484 3.305709 GGTGTCTGCAGCTGTTGTA 57.694 52.632 16.64 0.00 39.79 2.41
2888 6485 1.593196 GGTGTCTGCAGCTGTTGTAA 58.407 50.000 16.64 0.00 39.79 2.41
2889 6486 2.154462 GGTGTCTGCAGCTGTTGTAAT 58.846 47.619 16.64 0.00 39.79 1.89
2890 6487 2.160417 GGTGTCTGCAGCTGTTGTAATC 59.840 50.000 16.64 0.00 39.79 1.75
2891 6488 2.807967 GTGTCTGCAGCTGTTGTAATCA 59.192 45.455 16.64 1.46 0.00 2.57
2892 6489 3.438087 GTGTCTGCAGCTGTTGTAATCAT 59.562 43.478 16.64 0.00 0.00 2.45
2893 6490 3.437741 TGTCTGCAGCTGTTGTAATCATG 59.562 43.478 16.64 0.00 0.00 3.07
2894 6491 3.686241 GTCTGCAGCTGTTGTAATCATGA 59.314 43.478 16.64 0.00 0.00 3.07
2895 6492 4.334759 GTCTGCAGCTGTTGTAATCATGAT 59.665 41.667 16.64 1.18 0.00 2.45
2896 6493 5.525012 GTCTGCAGCTGTTGTAATCATGATA 59.475 40.000 16.64 0.00 0.00 2.15
2897 6494 6.037500 GTCTGCAGCTGTTGTAATCATGATAA 59.962 38.462 16.64 0.00 0.00 1.75
2898 6495 6.598850 TCTGCAGCTGTTGTAATCATGATAAA 59.401 34.615 16.64 1.53 0.00 1.40
2899 6496 7.121020 TCTGCAGCTGTTGTAATCATGATAAAA 59.879 33.333 16.64 1.16 0.00 1.52
2900 6497 7.252708 TGCAGCTGTTGTAATCATGATAAAAG 58.747 34.615 16.64 5.62 0.00 2.27
2901 6498 7.121020 TGCAGCTGTTGTAATCATGATAAAAGA 59.879 33.333 16.64 2.06 0.00 2.52
2902 6499 8.133627 GCAGCTGTTGTAATCATGATAAAAGAT 58.866 33.333 16.64 0.08 0.00 2.40
2903 6500 9.447040 CAGCTGTTGTAATCATGATAAAAGATG 57.553 33.333 9.04 9.39 0.00 2.90
2904 6501 9.399797 AGCTGTTGTAATCATGATAAAAGATGA 57.600 29.630 9.04 0.00 33.20 2.92
2942 6539 9.676861 ATGATCTGAATCTATTGAACAGTTTCA 57.323 29.630 15.71 15.71 35.01 2.69
2943 6540 9.159364 TGATCTGAATCTATTGAACAGTTTCAG 57.841 33.333 14.88 14.88 44.20 3.02
2961 6558 9.817365 CAGTTTCAGATAACTGTTGTAATCTTG 57.183 33.333 2.69 0.54 46.27 3.02
2962 6559 9.561069 AGTTTCAGATAACTGTTGTAATCTTGT 57.439 29.630 2.69 0.00 43.81 3.16
2993 6590 8.899427 AGTATTTGATATCACAGAAGATGGTG 57.101 34.615 4.48 0.00 36.36 4.17
2994 6591 8.708378 AGTATTTGATATCACAGAAGATGGTGA 58.292 33.333 4.48 0.00 46.92 4.02
3002 6599 6.550938 TCACAGAAGATGGTGATATCAGTT 57.449 37.500 5.42 0.00 39.00 3.16
3003 6600 6.950842 TCACAGAAGATGGTGATATCAGTTT 58.049 36.000 5.42 0.00 39.00 2.66
3004 6601 6.820152 TCACAGAAGATGGTGATATCAGTTTG 59.180 38.462 5.42 0.00 39.00 2.93
3005 6602 6.820152 CACAGAAGATGGTGATATCAGTTTGA 59.180 38.462 5.42 0.00 37.18 2.69
3006 6603 7.498239 CACAGAAGATGGTGATATCAGTTTGAT 59.502 37.037 5.42 0.00 37.76 2.57
3007 6604 8.051535 ACAGAAGATGGTGATATCAGTTTGATT 58.948 33.333 5.42 0.00 38.26 2.57
3008 6605 8.900781 CAGAAGATGGTGATATCAGTTTGATTT 58.099 33.333 5.42 0.00 38.26 2.17
3011 6608 8.388484 AGATGGTGATATCAGTTTGATTTAGC 57.612 34.615 5.42 0.00 38.26 3.09
3012 6609 6.942532 TGGTGATATCAGTTTGATTTAGCC 57.057 37.500 5.42 0.00 38.26 3.93
3013 6610 5.827797 TGGTGATATCAGTTTGATTTAGCCC 59.172 40.000 5.42 0.00 38.26 5.19
3014 6611 5.827797 GGTGATATCAGTTTGATTTAGCCCA 59.172 40.000 5.42 0.00 38.26 5.36
3015 6612 6.491403 GGTGATATCAGTTTGATTTAGCCCAT 59.509 38.462 5.42 0.00 38.26 4.00
3016 6613 7.014615 GGTGATATCAGTTTGATTTAGCCCATT 59.985 37.037 5.42 0.00 38.26 3.16
3017 6614 8.416329 GTGATATCAGTTTGATTTAGCCCATTT 58.584 33.333 5.42 0.00 38.26 2.32
3018 6615 8.980596 TGATATCAGTTTGATTTAGCCCATTTT 58.019 29.630 0.00 0.00 38.26 1.82
3021 6618 7.775053 TCAGTTTGATTTAGCCCATTTTAGT 57.225 32.000 0.00 0.00 0.00 2.24
3022 6619 8.189119 TCAGTTTGATTTAGCCCATTTTAGTT 57.811 30.769 0.00 0.00 0.00 2.24
3023 6620 8.087750 TCAGTTTGATTTAGCCCATTTTAGTTG 58.912 33.333 0.00 0.00 0.00 3.16
3024 6621 6.873605 AGTTTGATTTAGCCCATTTTAGTTGC 59.126 34.615 0.00 0.00 0.00 4.17
3025 6622 4.992688 TGATTTAGCCCATTTTAGTTGCG 58.007 39.130 0.00 0.00 0.00 4.85
3026 6623 4.461081 TGATTTAGCCCATTTTAGTTGCGT 59.539 37.500 0.00 0.00 0.00 5.24
3027 6624 4.857509 TTTAGCCCATTTTAGTTGCGTT 57.142 36.364 0.00 0.00 0.00 4.84
3028 6625 2.723124 AGCCCATTTTAGTTGCGTTG 57.277 45.000 0.00 0.00 0.00 4.10
3029 6626 2.235016 AGCCCATTTTAGTTGCGTTGA 58.765 42.857 0.00 0.00 0.00 3.18
3030 6627 2.625790 AGCCCATTTTAGTTGCGTTGAA 59.374 40.909 0.00 0.00 0.00 2.69
3031 6628 3.258123 AGCCCATTTTAGTTGCGTTGAAT 59.742 39.130 0.00 0.00 0.00 2.57
3032 6629 4.461081 AGCCCATTTTAGTTGCGTTGAATA 59.539 37.500 0.00 0.00 0.00 1.75
3033 6630 5.047660 AGCCCATTTTAGTTGCGTTGAATAA 60.048 36.000 0.00 0.00 0.00 1.40
3034 6631 5.061684 GCCCATTTTAGTTGCGTTGAATAAC 59.938 40.000 0.00 0.00 0.00 1.89
3035 6632 5.575218 CCCATTTTAGTTGCGTTGAATAACC 59.425 40.000 0.00 0.00 33.12 2.85
3036 6633 6.386654 CCATTTTAGTTGCGTTGAATAACCT 58.613 36.000 0.00 0.00 33.12 3.50
3037 6634 6.307800 CCATTTTAGTTGCGTTGAATAACCTG 59.692 38.462 0.00 0.00 33.12 4.00
3038 6635 6.380095 TTTTAGTTGCGTTGAATAACCTGT 57.620 33.333 0.00 0.00 33.12 4.00
3039 6636 5.600908 TTAGTTGCGTTGAATAACCTGTC 57.399 39.130 0.00 0.00 33.12 3.51
3040 6637 3.472652 AGTTGCGTTGAATAACCTGTCA 58.527 40.909 0.00 0.00 33.12 3.58
3041 6638 3.880490 AGTTGCGTTGAATAACCTGTCAA 59.120 39.130 0.00 0.00 33.12 3.18
3042 6639 3.889196 TGCGTTGAATAACCTGTCAAC 57.111 42.857 6.49 6.49 46.60 3.18
3053 6650 3.733443 ACCTGTCAACAAAATTCAGGC 57.267 42.857 9.07 0.00 46.49 4.85
3065 6671 0.038744 ATTCAGGCTCCAACAGTGGG 59.961 55.000 0.00 0.00 46.01 4.61
3070 6676 0.690762 GGCTCCAACAGTGGGAACTA 59.309 55.000 0.00 0.00 46.01 2.24
3090 6696 7.327032 GGAACTAAAATCTTGTTTCTGCACATC 59.673 37.037 0.00 0.00 0.00 3.06
3150 6991 7.806149 TGTGATACATTCTGTTACAACGTAG 57.194 36.000 0.00 0.00 0.00 3.51
3151 6992 6.809689 TGTGATACATTCTGTTACAACGTAGG 59.190 38.462 0.00 0.00 0.00 3.18
3152 6993 7.031372 GTGATACATTCTGTTACAACGTAGGA 58.969 38.462 0.00 0.00 0.00 2.94
3153 6994 7.220300 GTGATACATTCTGTTACAACGTAGGAG 59.780 40.741 0.00 0.00 0.00 3.69
3154 6995 5.464030 ACATTCTGTTACAACGTAGGAGT 57.536 39.130 0.00 0.00 0.00 3.85
3155 6996 5.850614 ACATTCTGTTACAACGTAGGAGTT 58.149 37.500 0.00 0.00 34.15 3.01
3164 7005 4.710528 CAACGTAGGAGTTGTCTGAAAC 57.289 45.455 0.00 0.00 44.58 2.78
3165 7006 4.369182 CAACGTAGGAGTTGTCTGAAACT 58.631 43.478 0.00 5.36 44.58 2.66
3176 7053 3.659786 TGTCTGAAACTGGTGTAATCCG 58.340 45.455 0.00 0.00 0.00 4.18
3199 7097 6.707608 CCGGTAGAAAAGTAAAAGTAGTTGGT 59.292 38.462 0.00 0.00 0.00 3.67
3300 7255 3.275617 TCCATATGTTTGCCGCTAGTT 57.724 42.857 1.24 0.00 0.00 2.24
3430 7385 5.723672 TGGAGTCTTACTTTAGTGGAGTG 57.276 43.478 0.00 0.00 0.00 3.51
3446 7401 2.099263 GGAGTGCTAATCTAGTCGTGCA 59.901 50.000 0.00 0.00 0.00 4.57
3511 7466 5.812642 AGTTGTCTGAAACTGTTGTAGTCTG 59.187 40.000 0.00 0.00 39.18 3.51
3593 7548 7.012327 GCTACTTGCACATTTATGTCCTTGATA 59.988 37.037 0.00 0.00 39.39 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 8.655651 TTGAATTTTGGTTAAATCTGGTCAAC 57.344 30.769 0.00 0.00 35.39 3.18
158 164 4.759516 AATGTTTAGCACGAAAATCCGT 57.240 36.364 0.00 0.00 44.43 4.69
248 255 6.549952 TCAATTGGACATGTTTTGCAAAAAC 58.450 32.000 25.40 18.69 0.00 2.43
350 363 6.089417 CCTGTATCGCCAAACAAAAGAAAATC 59.911 38.462 0.00 0.00 0.00 2.17
406 453 1.150827 GTTCGTGTCTTAAACCGGGG 58.849 55.000 6.32 0.00 0.00 5.73
415 462 1.331214 TTAGTCCCGGTTCGTGTCTT 58.669 50.000 0.00 0.00 0.00 3.01
438 485 3.639672 ACCGGGACTAATTAAAGGGTG 57.360 47.619 6.32 0.00 0.00 4.61
439 486 3.588396 TGAACCGGGACTAATTAAAGGGT 59.412 43.478 6.32 0.00 0.00 4.34
440 487 4.224991 TGAACCGGGACTAATTAAAGGG 57.775 45.455 6.32 0.00 0.00 3.95
442 489 6.113411 AGACATGAACCGGGACTAATTAAAG 58.887 40.000 6.32 0.00 0.00 1.85
443 490 6.057321 AGACATGAACCGGGACTAATTAAA 57.943 37.500 6.32 0.00 0.00 1.52
444 491 5.188163 TGAGACATGAACCGGGACTAATTAA 59.812 40.000 6.32 0.00 0.00 1.40
446 493 3.517901 TGAGACATGAACCGGGACTAATT 59.482 43.478 6.32 0.00 0.00 1.40
447 494 3.104512 TGAGACATGAACCGGGACTAAT 58.895 45.455 6.32 0.00 0.00 1.73
457 554 1.804748 GTCCCGGTTTGAGACATGAAC 59.195 52.381 0.00 0.00 0.00 3.18
463 560 2.614734 CCCTTTAGTCCCGGTTTGAGAC 60.615 54.545 0.00 0.00 0.00 3.36
485 582 0.810031 CGGGACTAAAGGGTGCGATG 60.810 60.000 0.00 0.00 0.00 3.84
486 583 1.520666 CGGGACTAAAGGGTGCGAT 59.479 57.895 0.00 0.00 0.00 4.58
487 584 2.652095 CCGGGACTAAAGGGTGCGA 61.652 63.158 0.00 0.00 0.00 5.10
488 585 2.125269 CCGGGACTAAAGGGTGCG 60.125 66.667 0.00 0.00 0.00 5.34
489 586 0.675837 GAACCGGGACTAAAGGGTGC 60.676 60.000 6.32 0.00 31.96 5.01
490 587 0.688487 TGAACCGGGACTAAAGGGTG 59.312 55.000 6.32 0.00 31.96 4.61
491 588 1.280998 CATGAACCGGGACTAAAGGGT 59.719 52.381 6.32 0.00 0.00 4.34
495 592 2.901192 TGAGACATGAACCGGGACTAAA 59.099 45.455 6.32 0.00 0.00 1.85
647 884 3.369471 GCCATGCACTAGTAGAAACCAGA 60.369 47.826 3.59 0.00 0.00 3.86
651 888 2.618053 ACGCCATGCACTAGTAGAAAC 58.382 47.619 3.59 0.00 0.00 2.78
664 901 0.676466 TGTCCAAGCCTAACGCCATG 60.676 55.000 0.00 0.00 38.78 3.66
665 902 0.392998 CTGTCCAAGCCTAACGCCAT 60.393 55.000 0.00 0.00 38.78 4.40
666 903 1.003839 CTGTCCAAGCCTAACGCCA 60.004 57.895 0.00 0.00 38.78 5.69
667 904 1.745489 CCTGTCCAAGCCTAACGCC 60.745 63.158 0.00 0.00 38.78 5.68
668 905 0.107654 ATCCTGTCCAAGCCTAACGC 60.108 55.000 0.00 0.00 37.98 4.84
669 906 3.118738 AGTTATCCTGTCCAAGCCTAACG 60.119 47.826 0.00 0.00 31.49 3.18
670 907 4.443621 GAGTTATCCTGTCCAAGCCTAAC 58.556 47.826 0.00 0.00 0.00 2.34
671 908 3.454812 GGAGTTATCCTGTCCAAGCCTAA 59.545 47.826 0.00 0.00 42.94 2.69
672 909 3.039011 GGAGTTATCCTGTCCAAGCCTA 58.961 50.000 0.00 0.00 42.94 3.93
673 910 1.840635 GGAGTTATCCTGTCCAAGCCT 59.159 52.381 0.00 0.00 42.94 4.58
674 911 1.559682 TGGAGTTATCCTGTCCAAGCC 59.440 52.381 0.00 0.00 46.80 4.35
675 912 3.135530 AGATGGAGTTATCCTGTCCAAGC 59.864 47.826 0.00 0.00 46.80 4.01
676 913 4.406972 TGAGATGGAGTTATCCTGTCCAAG 59.593 45.833 0.00 0.00 46.80 3.61
677 914 4.162320 GTGAGATGGAGTTATCCTGTCCAA 59.838 45.833 0.00 0.00 46.80 3.53
678 915 3.706594 GTGAGATGGAGTTATCCTGTCCA 59.293 47.826 0.00 0.00 46.80 4.02
679 916 3.706594 TGTGAGATGGAGTTATCCTGTCC 59.293 47.826 0.00 0.00 46.80 4.02
680 917 5.069648 TGATGTGAGATGGAGTTATCCTGTC 59.930 44.000 0.00 0.00 46.80 3.51
681 918 4.964897 TGATGTGAGATGGAGTTATCCTGT 59.035 41.667 0.00 0.00 46.80 4.00
682 919 5.163374 TGTGATGTGAGATGGAGTTATCCTG 60.163 44.000 0.00 0.00 46.80 3.86
683 920 4.964897 TGTGATGTGAGATGGAGTTATCCT 59.035 41.667 0.00 0.00 46.80 3.24
684 921 5.053145 GTGTGATGTGAGATGGAGTTATCC 58.947 45.833 0.00 0.00 46.87 2.59
685 922 5.664457 TGTGTGATGTGAGATGGAGTTATC 58.336 41.667 0.00 0.00 0.00 1.75
686 923 5.682234 TGTGTGATGTGAGATGGAGTTAT 57.318 39.130 0.00 0.00 0.00 1.89
687 924 5.482163 TTGTGTGATGTGAGATGGAGTTA 57.518 39.130 0.00 0.00 0.00 2.24
688 925 4.356405 TTGTGTGATGTGAGATGGAGTT 57.644 40.909 0.00 0.00 0.00 3.01
689 926 4.564782 ATTGTGTGATGTGAGATGGAGT 57.435 40.909 0.00 0.00 0.00 3.85
690 927 6.764560 TCATAATTGTGTGATGTGAGATGGAG 59.235 38.462 1.86 0.00 0.00 3.86
691 928 6.652053 TCATAATTGTGTGATGTGAGATGGA 58.348 36.000 1.86 0.00 0.00 3.41
692 929 6.930667 TCATAATTGTGTGATGTGAGATGG 57.069 37.500 1.86 0.00 0.00 3.51
693 930 8.238631 TGTTTCATAATTGTGTGATGTGAGATG 58.761 33.333 1.86 0.00 0.00 2.90
694 931 8.339344 TGTTTCATAATTGTGTGATGTGAGAT 57.661 30.769 1.86 0.00 0.00 2.75
695 932 7.742556 TGTTTCATAATTGTGTGATGTGAGA 57.257 32.000 1.86 0.00 0.00 3.27
696 933 8.975410 ATTGTTTCATAATTGTGTGATGTGAG 57.025 30.769 1.86 0.00 0.00 3.51
697 934 9.194271 CAATTGTTTCATAATTGTGTGATGTGA 57.806 29.630 1.86 0.00 39.49 3.58
698 935 9.194271 TCAATTGTTTCATAATTGTGTGATGTG 57.806 29.630 5.13 0.00 42.94 3.21
699 936 9.761504 TTCAATTGTTTCATAATTGTGTGATGT 57.238 25.926 5.13 0.00 42.94 3.06
713 950 9.891828 GTGATGTGTAGTTATTCAATTGTTTCA 57.108 29.630 5.13 0.00 0.00 2.69
714 951 9.891828 TGTGATGTGTAGTTATTCAATTGTTTC 57.108 29.630 5.13 0.00 0.00 2.78
715 952 9.897744 CTGTGATGTGTAGTTATTCAATTGTTT 57.102 29.630 5.13 0.00 0.00 2.83
716 953 9.066892 ACTGTGATGTGTAGTTATTCAATTGTT 57.933 29.630 5.13 0.00 0.00 2.83
717 954 8.621532 ACTGTGATGTGTAGTTATTCAATTGT 57.378 30.769 5.13 0.00 0.00 2.71
720 957 8.883731 GCTAACTGTGATGTGTAGTTATTCAAT 58.116 33.333 0.00 0.00 36.60 2.57
721 958 8.094548 AGCTAACTGTGATGTGTAGTTATTCAA 58.905 33.333 0.00 0.00 36.60 2.69
722 959 7.611770 AGCTAACTGTGATGTGTAGTTATTCA 58.388 34.615 0.00 0.00 36.60 2.57
723 960 9.021863 GTAGCTAACTGTGATGTGTAGTTATTC 57.978 37.037 0.00 0.00 36.60 1.75
724 961 8.528643 TGTAGCTAACTGTGATGTGTAGTTATT 58.471 33.333 0.00 0.00 36.60 1.40
725 962 7.974501 GTGTAGCTAACTGTGATGTGTAGTTAT 59.025 37.037 0.00 0.00 36.60 1.89
726 963 7.040271 TGTGTAGCTAACTGTGATGTGTAGTTA 60.040 37.037 0.00 0.00 36.22 2.24
727 964 6.157211 GTGTAGCTAACTGTGATGTGTAGTT 58.843 40.000 0.00 0.00 38.19 2.24
728 965 5.243060 TGTGTAGCTAACTGTGATGTGTAGT 59.757 40.000 0.00 0.00 0.00 2.73
729 966 5.709966 TGTGTAGCTAACTGTGATGTGTAG 58.290 41.667 0.00 0.00 0.00 2.74
730 967 5.715434 TGTGTAGCTAACTGTGATGTGTA 57.285 39.130 0.00 0.00 0.00 2.90
731 968 4.600692 TGTGTAGCTAACTGTGATGTGT 57.399 40.909 0.00 0.00 0.00 3.72
732 969 4.389992 CCTTGTGTAGCTAACTGTGATGTG 59.610 45.833 0.00 0.00 0.00 3.21
733 970 4.569943 CCTTGTGTAGCTAACTGTGATGT 58.430 43.478 0.00 0.00 0.00 3.06
734 971 3.372206 GCCTTGTGTAGCTAACTGTGATG 59.628 47.826 0.00 0.00 0.00 3.07
735 972 3.007940 TGCCTTGTGTAGCTAACTGTGAT 59.992 43.478 0.00 0.00 0.00 3.06
736 973 2.367241 TGCCTTGTGTAGCTAACTGTGA 59.633 45.455 0.00 0.00 0.00 3.58
737 974 2.766313 TGCCTTGTGTAGCTAACTGTG 58.234 47.619 0.00 0.00 0.00 3.66
738 975 3.338249 CATGCCTTGTGTAGCTAACTGT 58.662 45.455 0.00 0.00 0.00 3.55
739 976 2.096496 GCATGCCTTGTGTAGCTAACTG 59.904 50.000 6.36 0.00 0.00 3.16
740 977 2.026822 AGCATGCCTTGTGTAGCTAACT 60.027 45.455 15.66 0.00 0.00 2.24
741 978 2.352960 GAGCATGCCTTGTGTAGCTAAC 59.647 50.000 15.66 0.00 31.61 2.34
742 979 2.027285 TGAGCATGCCTTGTGTAGCTAA 60.027 45.455 15.66 0.00 31.61 3.09
743 980 1.554617 TGAGCATGCCTTGTGTAGCTA 59.445 47.619 15.66 0.00 31.61 3.32
744 981 0.325933 TGAGCATGCCTTGTGTAGCT 59.674 50.000 15.66 0.00 34.61 3.32
745 982 1.167851 TTGAGCATGCCTTGTGTAGC 58.832 50.000 15.66 0.00 0.00 3.58
746 983 5.762825 ATATTTGAGCATGCCTTGTGTAG 57.237 39.130 15.66 0.00 0.00 2.74
747 984 6.356556 AGTATATTTGAGCATGCCTTGTGTA 58.643 36.000 15.66 1.35 0.00 2.90
748 985 5.195940 AGTATATTTGAGCATGCCTTGTGT 58.804 37.500 15.66 0.00 0.00 3.72
749 986 5.762825 AGTATATTTGAGCATGCCTTGTG 57.237 39.130 15.66 0.00 0.00 3.33
750 987 7.880160 TTTAGTATATTTGAGCATGCCTTGT 57.120 32.000 15.66 0.00 0.00 3.16
751 988 7.864379 CCTTTTAGTATATTTGAGCATGCCTTG 59.136 37.037 15.66 0.00 0.00 3.61
752 989 7.561356 ACCTTTTAGTATATTTGAGCATGCCTT 59.439 33.333 15.66 0.00 0.00 4.35
753 990 7.062957 ACCTTTTAGTATATTTGAGCATGCCT 58.937 34.615 15.66 1.01 0.00 4.75
754 991 7.277174 ACCTTTTAGTATATTTGAGCATGCC 57.723 36.000 15.66 6.65 0.00 4.40
755 992 8.405531 TCAACCTTTTAGTATATTTGAGCATGC 58.594 33.333 10.51 10.51 0.00 4.06
756 993 9.941664 CTCAACCTTTTAGTATATTTGAGCATG 57.058 33.333 0.00 0.00 34.01 4.06
757 994 9.686683 ACTCAACCTTTTAGTATATTTGAGCAT 57.313 29.630 8.06 0.00 41.34 3.79
772 1009 9.136323 AGTCTGATTTCATTTACTCAACCTTTT 57.864 29.630 0.00 0.00 0.00 2.27
773 1010 8.697507 AGTCTGATTTCATTTACTCAACCTTT 57.302 30.769 0.00 0.00 0.00 3.11
774 1011 9.793259 TTAGTCTGATTTCATTTACTCAACCTT 57.207 29.630 0.00 0.00 0.00 3.50
775 1012 9.220767 GTTAGTCTGATTTCATTTACTCAACCT 57.779 33.333 0.00 0.00 0.00 3.50
776 1013 8.999431 TGTTAGTCTGATTTCATTTACTCAACC 58.001 33.333 0.00 0.00 0.00 3.77
777 1014 9.813080 GTGTTAGTCTGATTTCATTTACTCAAC 57.187 33.333 0.00 0.00 0.00 3.18
778 1015 9.554395 TGTGTTAGTCTGATTTCATTTACTCAA 57.446 29.630 0.00 0.00 0.00 3.02
779 1016 9.554395 TTGTGTTAGTCTGATTTCATTTACTCA 57.446 29.630 0.00 0.00 0.00 3.41
784 1021 8.084073 CCACATTGTGTTAGTCTGATTTCATTT 58.916 33.333 15.34 0.00 0.00 2.32
785 1022 7.448161 TCCACATTGTGTTAGTCTGATTTCATT 59.552 33.333 15.34 0.00 0.00 2.57
790 1027 6.540189 GCTATCCACATTGTGTTAGTCTGATT 59.460 38.462 15.34 0.00 0.00 2.57
795 1032 6.494893 TTTGCTATCCACATTGTGTTAGTC 57.505 37.500 15.34 11.42 0.00 2.59
805 1042 2.648059 GTCCTGCTTTGCTATCCACAT 58.352 47.619 0.00 0.00 0.00 3.21
813 1050 2.670934 CTGCCGTCCTGCTTTGCT 60.671 61.111 0.00 0.00 0.00 3.91
953 3026 0.178990 GGAAGGCTGTTGGTTGAGGT 60.179 55.000 0.00 0.00 0.00 3.85
1114 3205 2.577593 GGCGTGGAGGTAGGTGTC 59.422 66.667 0.00 0.00 0.00 3.67
1115 3206 3.379445 CGGCGTGGAGGTAGGTGT 61.379 66.667 0.00 0.00 0.00 4.16
1272 3369 4.838486 GAGACGACGCCGGAGCTG 62.838 72.222 5.05 0.00 40.78 4.24
1434 3534 4.030452 GTGCAGAGGCCGTTGTGC 62.030 66.667 7.14 7.14 40.13 4.57
1568 3674 2.038837 GGGAGGTACTTGCCGTTGC 61.039 63.158 0.00 0.00 41.55 4.17
1743 3904 4.310769 CATGGTTATGTTCGGGAGATCTC 58.689 47.826 14.75 14.75 39.57 2.75
1810 4065 3.664025 CTGATCTGCCGTTCCGCCA 62.664 63.158 0.00 0.00 0.00 5.69
1939 4249 1.929836 GTTCAGTCCATGTCGATCAGC 59.070 52.381 0.00 0.00 0.00 4.26
1940 4250 3.185330 CAGTTCAGTCCATGTCGATCAG 58.815 50.000 0.00 0.00 0.00 2.90
1941 4251 2.675032 GCAGTTCAGTCCATGTCGATCA 60.675 50.000 0.00 0.00 0.00 2.92
1942 4252 1.929836 GCAGTTCAGTCCATGTCGATC 59.070 52.381 0.00 0.00 0.00 3.69
1943 4253 1.276138 TGCAGTTCAGTCCATGTCGAT 59.724 47.619 0.00 0.00 0.00 3.59
1944 4254 0.678950 TGCAGTTCAGTCCATGTCGA 59.321 50.000 0.00 0.00 0.00 4.20
1945 4255 1.073964 CTGCAGTTCAGTCCATGTCG 58.926 55.000 5.25 0.00 38.02 4.35
1946 4256 1.446907 CCTGCAGTTCAGTCCATGTC 58.553 55.000 13.81 0.00 41.25 3.06
1947 4257 0.607489 GCCTGCAGTTCAGTCCATGT 60.607 55.000 13.81 0.00 41.25 3.21
1956 4332 1.228245 TTGGGTGAGCCTGCAGTTC 60.228 57.895 13.81 10.55 34.45 3.01
2320 4792 1.673920 ACGTCGTGGAAAACAAATGCT 59.326 42.857 0.00 0.00 0.00 3.79
2322 4794 3.686128 TGAACGTCGTGGAAAACAAATG 58.314 40.909 0.00 0.00 0.00 2.32
2330 4802 2.198406 CAAAGTCTGAACGTCGTGGAA 58.802 47.619 0.00 0.00 0.00 3.53
2332 4804 0.232303 GCAAAGTCTGAACGTCGTGG 59.768 55.000 0.00 0.00 0.00 4.94
2396 4934 4.462483 ACTGCTTTTCAGACTTGGAACAAA 59.538 37.500 0.00 0.00 45.16 2.83
2402 4940 5.702670 TCAGATAACTGCTTTTCAGACTTGG 59.297 40.000 0.00 0.00 45.72 3.61
2403 4941 6.791887 TCAGATAACTGCTTTTCAGACTTG 57.208 37.500 0.00 0.00 45.72 3.16
2415 4986 8.283992 CAGATTTCATCAGATTCAGATAACTGC 58.716 37.037 0.00 0.00 43.17 4.40
2432 5345 4.393062 CGCACTACCAGTTTCAGATTTCAT 59.607 41.667 0.00 0.00 0.00 2.57
2448 5718 0.319555 TTGCAGACACCTCGCACTAC 60.320 55.000 0.00 0.00 34.87 2.73
2454 5732 0.861837 GAACAGTTGCAGACACCTCG 59.138 55.000 0.00 0.00 0.00 4.63
2503 5788 4.923871 CCATATCCGAGACAAGTAATTCCG 59.076 45.833 0.00 0.00 0.00 4.30
2505 5790 7.155328 ACATCCATATCCGAGACAAGTAATTC 58.845 38.462 0.00 0.00 0.00 2.17
2506 5791 7.067496 ACATCCATATCCGAGACAAGTAATT 57.933 36.000 0.00 0.00 0.00 1.40
2516 5826 7.873719 AGTTCTAGATACATCCATATCCGAG 57.126 40.000 0.00 0.00 32.76 4.63
2547 5929 6.309980 GTCGCAGAAATGGATGTATCTAGATG 59.690 42.308 15.79 0.00 39.69 2.90
2548 5930 6.015095 TGTCGCAGAAATGGATGTATCTAGAT 60.015 38.462 10.73 10.73 39.69 1.98
2549 5931 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
2550 5932 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
2553 5935 5.484173 TTTGTCGCAGAAATGGATGTATC 57.516 39.130 0.00 0.00 39.69 2.24
2555 5937 6.993786 TTATTTGTCGCAGAAATGGATGTA 57.006 33.333 0.00 0.00 39.69 2.29
2557 5939 6.418819 GGAATTATTTGTCGCAGAAATGGATG 59.581 38.462 0.00 0.00 39.69 3.51
2558 5940 6.507023 GGAATTATTTGTCGCAGAAATGGAT 58.493 36.000 0.00 0.00 39.69 3.41
2559 5941 5.448496 CGGAATTATTTGTCGCAGAAATGGA 60.448 40.000 0.00 0.00 39.69 3.41
2560 5942 4.734854 CGGAATTATTTGTCGCAGAAATGG 59.265 41.667 0.00 0.00 39.69 3.16
2564 5946 4.452795 TGTTCGGAATTATTTGTCGCAGAA 59.547 37.500 0.00 0.00 39.69 3.02
2566 5948 4.092821 TCTGTTCGGAATTATTTGTCGCAG 59.907 41.667 0.00 0.00 0.00 5.18
2568 5950 4.494199 CCTCTGTTCGGAATTATTTGTCGC 60.494 45.833 0.00 0.00 0.00 5.19
2569 5951 4.034048 CCCTCTGTTCGGAATTATTTGTCG 59.966 45.833 0.00 0.00 0.00 4.35
2572 5954 5.186198 ACTCCCTCTGTTCGGAATTATTTG 58.814 41.667 0.00 0.00 0.00 2.32
2573 5955 5.437191 ACTCCCTCTGTTCGGAATTATTT 57.563 39.130 0.00 0.00 0.00 1.40
2576 5958 4.773674 TGTTACTCCCTCTGTTCGGAATTA 59.226 41.667 0.00 0.00 0.00 1.40
2577 5959 3.581332 TGTTACTCCCTCTGTTCGGAATT 59.419 43.478 0.00 0.00 0.00 2.17
2578 5960 3.170717 TGTTACTCCCTCTGTTCGGAAT 58.829 45.455 0.00 0.00 0.00 3.01
2579 5961 2.561419 CTGTTACTCCCTCTGTTCGGAA 59.439 50.000 0.00 0.00 0.00 4.30
2580 5962 2.168496 CTGTTACTCCCTCTGTTCGGA 58.832 52.381 0.00 0.00 0.00 4.55
2581 5963 2.164624 CTCTGTTACTCCCTCTGTTCGG 59.835 54.545 0.00 0.00 0.00 4.30
2582 5964 3.082548 TCTCTGTTACTCCCTCTGTTCG 58.917 50.000 0.00 0.00 0.00 3.95
2583 5965 4.081917 CCTTCTCTGTTACTCCCTCTGTTC 60.082 50.000 0.00 0.00 0.00 3.18
2584 5966 3.835395 CCTTCTCTGTTACTCCCTCTGTT 59.165 47.826 0.00 0.00 0.00 3.16
2606 6201 6.377327 AAATCAAACGGATATCATCACCAC 57.623 37.500 4.83 0.00 34.28 4.16
2670 6267 5.823045 CAGTTTTAGACAACTCCAAAGTCCT 59.177 40.000 0.00 0.00 34.60 3.85
2671 6268 5.589050 ACAGTTTTAGACAACTCCAAAGTCC 59.411 40.000 0.00 0.00 34.60 3.85
2672 6269 6.679327 ACAGTTTTAGACAACTCCAAAGTC 57.321 37.500 0.00 0.00 34.60 3.01
2673 6270 6.433093 ACAACAGTTTTAGACAACTCCAAAGT 59.567 34.615 0.00 0.00 34.60 2.66
2674 6271 6.852664 ACAACAGTTTTAGACAACTCCAAAG 58.147 36.000 0.00 0.00 34.60 2.77
2675 6272 6.827586 ACAACAGTTTTAGACAACTCCAAA 57.172 33.333 0.00 0.00 34.60 3.28
2676 6273 7.107542 ACTACAACAGTTTTAGACAACTCCAA 58.892 34.615 12.58 0.00 34.60 3.53
2677 6274 6.646267 ACTACAACAGTTTTAGACAACTCCA 58.354 36.000 12.58 0.00 34.60 3.86
2678 6275 6.985059 AGACTACAACAGTTTTAGACAACTCC 59.015 38.462 12.58 0.00 37.72 3.85
2679 6276 8.328864 CAAGACTACAACAGTTTTAGACAACTC 58.671 37.037 12.58 0.95 37.72 3.01
2680 6277 7.822822 ACAAGACTACAACAGTTTTAGACAACT 59.177 33.333 12.58 4.69 37.72 3.16
2681 6278 7.971455 ACAAGACTACAACAGTTTTAGACAAC 58.029 34.615 12.58 2.90 37.72 3.32
2682 6279 9.309516 CTACAAGACTACAACAGTTTTAGACAA 57.690 33.333 12.58 0.00 37.72 3.18
2683 6280 8.689061 TCTACAAGACTACAACAGTTTTAGACA 58.311 33.333 12.58 0.00 37.72 3.41
2684 6281 9.525409 TTCTACAAGACTACAACAGTTTTAGAC 57.475 33.333 12.58 7.07 37.72 2.59
2688 6285 9.227777 ACTTTTCTACAAGACTACAACAGTTTT 57.772 29.630 0.00 0.00 37.72 2.43
2689 6286 8.788325 ACTTTTCTACAAGACTACAACAGTTT 57.212 30.769 0.00 0.00 37.72 2.66
2690 6287 9.880157 TTACTTTTCTACAAGACTACAACAGTT 57.120 29.630 0.00 0.00 37.72 3.16
2691 6288 9.880157 TTTACTTTTCTACAAGACTACAACAGT 57.120 29.630 0.00 0.00 41.47 3.55
2704 6301 9.280174 CCATCCAACTACTTTTACTTTTCTACA 57.720 33.333 0.00 0.00 0.00 2.74
2705 6302 9.498176 TCCATCCAACTACTTTTACTTTTCTAC 57.502 33.333 0.00 0.00 0.00 2.59
2707 6304 8.990163 TTCCATCCAACTACTTTTACTTTTCT 57.010 30.769 0.00 0.00 0.00 2.52
2716 6313 9.981460 AGAAATCTATTTCCATCCAACTACTTT 57.019 29.630 10.98 0.00 45.52 2.66
2717 6314 9.620259 GAGAAATCTATTTCCATCCAACTACTT 57.380 33.333 10.98 0.00 45.52 2.24
2718 6315 8.772250 TGAGAAATCTATTTCCATCCAACTACT 58.228 33.333 10.98 0.00 45.52 2.57
2719 6316 8.964476 TGAGAAATCTATTTCCATCCAACTAC 57.036 34.615 10.98 0.00 45.52 2.73
2720 6317 8.772250 ACTGAGAAATCTATTTCCATCCAACTA 58.228 33.333 10.98 0.00 45.52 2.24
2721 6318 7.637511 ACTGAGAAATCTATTTCCATCCAACT 58.362 34.615 10.98 0.00 45.52 3.16
2722 6319 7.872113 ACTGAGAAATCTATTTCCATCCAAC 57.128 36.000 10.98 0.00 45.52 3.77
2723 6320 8.742777 CAAACTGAGAAATCTATTTCCATCCAA 58.257 33.333 10.98 0.00 45.52 3.53
2724 6321 7.890127 ACAAACTGAGAAATCTATTTCCATCCA 59.110 33.333 10.98 5.12 45.52 3.41
2725 6322 8.186821 CACAAACTGAGAAATCTATTTCCATCC 58.813 37.037 10.98 1.48 45.52 3.51
2726 6323 8.734386 ACACAAACTGAGAAATCTATTTCCATC 58.266 33.333 10.98 5.18 45.52 3.51
2727 6324 8.641498 ACACAAACTGAGAAATCTATTTCCAT 57.359 30.769 10.98 0.00 45.52 3.41
2728 6325 9.567776 TTACACAAACTGAGAAATCTATTTCCA 57.432 29.630 10.98 8.43 45.52 3.53
2735 6332 9.388506 CCATCTATTACACAAACTGAGAAATCT 57.611 33.333 0.00 0.00 0.00 2.40
2736 6333 9.167311 ACCATCTATTACACAAACTGAGAAATC 57.833 33.333 0.00 0.00 0.00 2.17
2737 6334 9.167311 GACCATCTATTACACAAACTGAGAAAT 57.833 33.333 0.00 0.00 0.00 2.17
2738 6335 8.375506 AGACCATCTATTACACAAACTGAGAAA 58.624 33.333 0.00 0.00 0.00 2.52
2739 6336 7.819415 CAGACCATCTATTACACAAACTGAGAA 59.181 37.037 0.00 0.00 0.00 2.87
2740 6337 7.178451 TCAGACCATCTATTACACAAACTGAGA 59.822 37.037 0.00 0.00 0.00 3.27
2741 6338 7.323420 TCAGACCATCTATTACACAAACTGAG 58.677 38.462 0.00 0.00 0.00 3.35
2742 6339 7.239763 TCAGACCATCTATTACACAAACTGA 57.760 36.000 0.00 0.00 0.00 3.41
2743 6340 7.413438 GCTTCAGACCATCTATTACACAAACTG 60.413 40.741 0.00 0.00 0.00 3.16
2744 6341 6.595716 GCTTCAGACCATCTATTACACAAACT 59.404 38.462 0.00 0.00 0.00 2.66
2745 6342 6.595716 AGCTTCAGACCATCTATTACACAAAC 59.404 38.462 0.00 0.00 0.00 2.93
2746 6343 6.711277 AGCTTCAGACCATCTATTACACAAA 58.289 36.000 0.00 0.00 0.00 2.83
2747 6344 6.299805 AGCTTCAGACCATCTATTACACAA 57.700 37.500 0.00 0.00 0.00 3.33
2748 6345 5.939764 AGCTTCAGACCATCTATTACACA 57.060 39.130 0.00 0.00 0.00 3.72
2749 6346 7.045126 ACTAGCTTCAGACCATCTATTACAC 57.955 40.000 0.00 0.00 0.00 2.90
2750 6347 7.492524 CAACTAGCTTCAGACCATCTATTACA 58.507 38.462 0.00 0.00 0.00 2.41
2751 6348 6.422400 GCAACTAGCTTCAGACCATCTATTAC 59.578 42.308 0.00 0.00 41.15 1.89
2752 6349 6.098266 TGCAACTAGCTTCAGACCATCTATTA 59.902 38.462 0.00 0.00 45.94 0.98
2753 6350 5.104776 TGCAACTAGCTTCAGACCATCTATT 60.105 40.000 0.00 0.00 45.94 1.73
2754 6351 4.406972 TGCAACTAGCTTCAGACCATCTAT 59.593 41.667 0.00 0.00 45.94 1.98
2755 6352 3.769300 TGCAACTAGCTTCAGACCATCTA 59.231 43.478 0.00 0.00 45.94 1.98
2756 6353 2.568956 TGCAACTAGCTTCAGACCATCT 59.431 45.455 0.00 0.00 45.94 2.90
2757 6354 2.935201 CTGCAACTAGCTTCAGACCATC 59.065 50.000 0.00 0.00 45.94 3.51
2758 6355 2.568956 TCTGCAACTAGCTTCAGACCAT 59.431 45.455 0.00 0.00 45.94 3.55
2759 6356 1.970640 TCTGCAACTAGCTTCAGACCA 59.029 47.619 0.00 0.00 45.94 4.02
2760 6357 2.751166 TCTGCAACTAGCTTCAGACC 57.249 50.000 0.00 0.00 45.94 3.85
2761 6358 4.692625 TGAAATCTGCAACTAGCTTCAGAC 59.307 41.667 9.64 1.29 45.94 3.51
2762 6359 4.898320 TGAAATCTGCAACTAGCTTCAGA 58.102 39.130 9.81 9.81 45.94 3.27
2763 6360 4.694509 ACTGAAATCTGCAACTAGCTTCAG 59.305 41.667 12.38 12.38 45.94 3.02
2764 6361 4.645535 ACTGAAATCTGCAACTAGCTTCA 58.354 39.130 0.00 0.00 45.94 3.02
2765 6362 4.692625 TGACTGAAATCTGCAACTAGCTTC 59.307 41.667 0.00 0.00 45.94 3.86
2766 6363 4.645535 TGACTGAAATCTGCAACTAGCTT 58.354 39.130 0.00 0.00 45.94 3.74
2767 6364 4.277515 TGACTGAAATCTGCAACTAGCT 57.722 40.909 0.00 0.00 45.94 3.32
2768 6365 4.874966 AGATGACTGAAATCTGCAACTAGC 59.125 41.667 0.00 0.00 45.96 3.42
2769 6366 6.104665 TGAGATGACTGAAATCTGCAACTAG 58.895 40.000 0.00 0.00 34.50 2.57
2770 6367 6.041423 TGAGATGACTGAAATCTGCAACTA 57.959 37.500 0.00 0.00 34.50 2.24
2771 6368 4.903054 TGAGATGACTGAAATCTGCAACT 58.097 39.130 0.00 0.00 34.50 3.16
2772 6369 5.814764 ATGAGATGACTGAAATCTGCAAC 57.185 39.130 0.00 0.00 34.50 4.17
2773 6370 6.431852 TGAAATGAGATGACTGAAATCTGCAA 59.568 34.615 0.00 0.00 34.50 4.08
2774 6371 5.941647 TGAAATGAGATGACTGAAATCTGCA 59.058 36.000 2.42 0.00 34.50 4.41
2775 6372 6.256686 GTGAAATGAGATGACTGAAATCTGC 58.743 40.000 2.42 0.00 34.50 4.26
2776 6373 6.598457 AGGTGAAATGAGATGACTGAAATCTG 59.402 38.462 2.42 0.00 34.50 2.90
2777 6374 6.719301 AGGTGAAATGAGATGACTGAAATCT 58.281 36.000 0.00 0.00 37.09 2.40
2778 6375 6.998968 AGGTGAAATGAGATGACTGAAATC 57.001 37.500 0.00 0.00 0.00 2.17
2779 6376 6.152323 CCAAGGTGAAATGAGATGACTGAAAT 59.848 38.462 0.00 0.00 0.00 2.17
2780 6377 5.474532 CCAAGGTGAAATGAGATGACTGAAA 59.525 40.000 0.00 0.00 0.00 2.69
2781 6378 5.005740 CCAAGGTGAAATGAGATGACTGAA 58.994 41.667 0.00 0.00 0.00 3.02
2782 6379 4.582869 CCAAGGTGAAATGAGATGACTGA 58.417 43.478 0.00 0.00 0.00 3.41
2783 6380 3.128242 GCCAAGGTGAAATGAGATGACTG 59.872 47.826 0.00 0.00 0.00 3.51
2784 6381 3.245016 TGCCAAGGTGAAATGAGATGACT 60.245 43.478 0.00 0.00 0.00 3.41
2785 6382 3.084039 TGCCAAGGTGAAATGAGATGAC 58.916 45.455 0.00 0.00 0.00 3.06
2786 6383 3.438216 TGCCAAGGTGAAATGAGATGA 57.562 42.857 0.00 0.00 0.00 2.92
2787 6384 4.219070 TCTTTGCCAAGGTGAAATGAGATG 59.781 41.667 0.00 0.00 0.00 2.90
2788 6385 4.410099 TCTTTGCCAAGGTGAAATGAGAT 58.590 39.130 0.00 0.00 0.00 2.75
2789 6386 3.831323 TCTTTGCCAAGGTGAAATGAGA 58.169 40.909 0.00 0.00 0.00 3.27
2790 6387 4.279169 TCTTCTTTGCCAAGGTGAAATGAG 59.721 41.667 0.00 0.00 0.00 2.90
2791 6388 4.214310 TCTTCTTTGCCAAGGTGAAATGA 58.786 39.130 0.00 0.00 0.00 2.57
2792 6389 4.589216 TCTTCTTTGCCAAGGTGAAATG 57.411 40.909 0.00 0.00 0.00 2.32
2793 6390 6.012745 AGTATCTTCTTTGCCAAGGTGAAAT 58.987 36.000 0.00 0.00 0.00 2.17
2794 6391 5.385198 AGTATCTTCTTTGCCAAGGTGAAA 58.615 37.500 0.00 0.00 0.00 2.69
2795 6392 4.985538 AGTATCTTCTTTGCCAAGGTGAA 58.014 39.130 0.00 0.00 0.00 3.18
2796 6393 4.640771 AGTATCTTCTTTGCCAAGGTGA 57.359 40.909 0.00 0.00 0.00 4.02
2797 6394 7.396540 AATTAGTATCTTCTTTGCCAAGGTG 57.603 36.000 0.00 0.00 0.00 4.00
2798 6395 8.422577 AAAATTAGTATCTTCTTTGCCAAGGT 57.577 30.769 0.00 0.00 0.00 3.50
2799 6396 8.743714 AGAAAATTAGTATCTTCTTTGCCAAGG 58.256 33.333 0.00 0.00 0.00 3.61
2820 6417 7.978975 CCACCTGAATTTTCACAGTTTAGAAAA 59.021 33.333 0.00 0.00 44.80 2.29
2821 6418 7.123547 ACCACCTGAATTTTCACAGTTTAGAAA 59.876 33.333 0.00 0.00 32.90 2.52
2822 6419 6.605594 ACCACCTGAATTTTCACAGTTTAGAA 59.394 34.615 0.00 0.00 32.90 2.10
2823 6420 6.126409 ACCACCTGAATTTTCACAGTTTAGA 58.874 36.000 0.00 0.00 32.90 2.10
2824 6421 6.391227 ACCACCTGAATTTTCACAGTTTAG 57.609 37.500 0.00 0.00 32.90 1.85
2825 6422 6.263617 GGTACCACCTGAATTTTCACAGTTTA 59.736 38.462 7.15 0.00 34.73 2.01
2826 6423 5.068591 GGTACCACCTGAATTTTCACAGTTT 59.931 40.000 7.15 0.00 34.73 2.66
2827 6424 4.583073 GGTACCACCTGAATTTTCACAGTT 59.417 41.667 7.15 0.00 34.73 3.16
2828 6425 4.142038 GGTACCACCTGAATTTTCACAGT 58.858 43.478 7.15 0.00 34.73 3.55
2829 6426 4.766404 GGTACCACCTGAATTTTCACAG 57.234 45.455 7.15 0.00 34.73 3.66
2842 6439 1.687563 AACAGTTGCAAGGTACCACC 58.312 50.000 15.94 1.92 38.99 4.61
2843 6440 3.250040 CACTAACAGTTGCAAGGTACCAC 59.750 47.826 15.94 2.58 0.00 4.16
2844 6441 3.118186 ACACTAACAGTTGCAAGGTACCA 60.118 43.478 15.94 0.00 0.00 3.25
2845 6442 3.473625 ACACTAACAGTTGCAAGGTACC 58.526 45.455 2.73 2.73 0.00 3.34
2846 6443 5.178809 CCTTACACTAACAGTTGCAAGGTAC 59.821 44.000 0.00 0.00 0.00 3.34
2847 6444 5.163280 ACCTTACACTAACAGTTGCAAGGTA 60.163 40.000 0.00 0.00 41.98 3.08
2848 6445 4.134563 CCTTACACTAACAGTTGCAAGGT 58.865 43.478 0.00 0.00 0.00 3.50
2849 6446 4.024048 CACCTTACACTAACAGTTGCAAGG 60.024 45.833 0.00 0.00 37.81 3.61
2850 6447 4.574828 ACACCTTACACTAACAGTTGCAAG 59.425 41.667 0.00 0.00 0.00 4.01
2851 6448 4.519213 ACACCTTACACTAACAGTTGCAA 58.481 39.130 0.00 0.00 0.00 4.08
2852 6449 4.124238 GACACCTTACACTAACAGTTGCA 58.876 43.478 0.00 0.00 0.00 4.08
2853 6450 4.211374 CAGACACCTTACACTAACAGTTGC 59.789 45.833 0.00 0.00 0.00 4.17
2854 6451 4.211374 GCAGACACCTTACACTAACAGTTG 59.789 45.833 0.00 0.00 0.00 3.16
2855 6452 4.141801 TGCAGACACCTTACACTAACAGTT 60.142 41.667 0.00 0.00 0.00 3.16
2856 6453 3.386726 TGCAGACACCTTACACTAACAGT 59.613 43.478 0.00 0.00 0.00 3.55
2857 6454 3.990092 TGCAGACACCTTACACTAACAG 58.010 45.455 0.00 0.00 0.00 3.16
2858 6455 3.802329 GCTGCAGACACCTTACACTAACA 60.802 47.826 20.43 0.00 0.00 2.41
2859 6456 2.737252 GCTGCAGACACCTTACACTAAC 59.263 50.000 20.43 0.00 0.00 2.34
2860 6457 2.632996 AGCTGCAGACACCTTACACTAA 59.367 45.455 20.43 0.00 0.00 2.24
2861 6458 2.029020 CAGCTGCAGACACCTTACACTA 60.029 50.000 20.43 0.00 0.00 2.74
2862 6459 1.051812 AGCTGCAGACACCTTACACT 58.948 50.000 20.43 0.00 0.00 3.55
2863 6460 1.151668 CAGCTGCAGACACCTTACAC 58.848 55.000 20.43 0.00 0.00 2.90
2864 6461 0.758734 ACAGCTGCAGACACCTTACA 59.241 50.000 20.43 0.00 0.00 2.41
2865 6462 1.532868 CAACAGCTGCAGACACCTTAC 59.467 52.381 20.43 0.00 0.00 2.34
2866 6463 1.140852 ACAACAGCTGCAGACACCTTA 59.859 47.619 20.43 0.00 0.00 2.69
2867 6464 0.107017 ACAACAGCTGCAGACACCTT 60.107 50.000 20.43 0.00 0.00 3.50
2868 6465 0.758734 TACAACAGCTGCAGACACCT 59.241 50.000 20.43 0.98 0.00 4.00
2869 6466 1.593196 TTACAACAGCTGCAGACACC 58.407 50.000 20.43 0.00 0.00 4.16
2870 6467 2.807967 TGATTACAACAGCTGCAGACAC 59.192 45.455 20.43 0.00 0.00 3.67
2871 6468 3.124578 TGATTACAACAGCTGCAGACA 57.875 42.857 20.43 2.59 0.00 3.41
2872 6469 3.686241 TCATGATTACAACAGCTGCAGAC 59.314 43.478 20.43 9.11 0.00 3.51
2873 6470 3.941573 TCATGATTACAACAGCTGCAGA 58.058 40.909 20.43 0.00 0.00 4.26
2874 6471 4.895224 ATCATGATTACAACAGCTGCAG 57.105 40.909 15.27 10.11 0.00 4.41
2875 6472 6.756299 TTTATCATGATTACAACAGCTGCA 57.244 33.333 14.65 1.46 0.00 4.41
2876 6473 7.475015 TCTTTTATCATGATTACAACAGCTGC 58.525 34.615 14.65 0.00 0.00 5.25
2877 6474 9.447040 CATCTTTTATCATGATTACAACAGCTG 57.553 33.333 14.65 13.48 0.00 4.24
2878 6475 9.399797 TCATCTTTTATCATGATTACAACAGCT 57.600 29.630 14.65 0.00 0.00 4.24
2916 6513 9.676861 TGAAACTGTTCAATAGATTCAGATCAT 57.323 29.630 3.14 0.00 40.87 2.45
2936 6533 9.561069 ACAAGATTACAACAGTTATCTGAAACT 57.439 29.630 7.81 1.18 43.76 2.66
2967 6564 9.334947 CACCATCTTCTGTGATATCAAATACTT 57.665 33.333 7.07 0.00 34.37 2.24
2968 6565 8.708378 TCACCATCTTCTGTGATATCAAATACT 58.292 33.333 7.07 0.00 36.62 2.12
2969 6566 8.893219 TCACCATCTTCTGTGATATCAAATAC 57.107 34.615 7.07 0.00 36.62 1.89
2979 6576 6.550938 AACTGATATCACCATCTTCTGTGA 57.449 37.500 0.00 0.00 44.86 3.58
2980 6577 6.820152 TCAAACTGATATCACCATCTTCTGTG 59.180 38.462 0.00 0.00 0.00 3.66
2981 6578 6.950842 TCAAACTGATATCACCATCTTCTGT 58.049 36.000 0.00 0.00 0.00 3.41
2982 6579 8.447924 AATCAAACTGATATCACCATCTTCTG 57.552 34.615 0.00 0.00 35.76 3.02
2985 6582 8.844244 GCTAAATCAAACTGATATCACCATCTT 58.156 33.333 0.00 0.00 35.76 2.40
2986 6583 7.446625 GGCTAAATCAAACTGATATCACCATCT 59.553 37.037 0.00 0.00 35.76 2.90
2987 6584 7.308830 GGGCTAAATCAAACTGATATCACCATC 60.309 40.741 0.00 0.00 35.76 3.51
2988 6585 6.491403 GGGCTAAATCAAACTGATATCACCAT 59.509 38.462 0.00 0.00 35.76 3.55
2989 6586 5.827797 GGGCTAAATCAAACTGATATCACCA 59.172 40.000 0.00 0.00 35.76 4.17
2990 6587 5.827797 TGGGCTAAATCAAACTGATATCACC 59.172 40.000 0.00 0.00 35.76 4.02
2991 6588 6.942532 TGGGCTAAATCAAACTGATATCAC 57.057 37.500 0.00 0.00 35.76 3.06
2992 6589 8.537728 AAATGGGCTAAATCAAACTGATATCA 57.462 30.769 5.07 5.07 35.76 2.15
2995 6592 9.474313 ACTAAAATGGGCTAAATCAAACTGATA 57.526 29.630 0.00 0.00 35.76 2.15
2996 6593 8.366359 ACTAAAATGGGCTAAATCAAACTGAT 57.634 30.769 0.00 0.00 39.09 2.90
2997 6594 7.775053 ACTAAAATGGGCTAAATCAAACTGA 57.225 32.000 0.00 0.00 0.00 3.41
2998 6595 7.148590 GCAACTAAAATGGGCTAAATCAAACTG 60.149 37.037 0.00 0.00 0.00 3.16
2999 6596 6.873605 GCAACTAAAATGGGCTAAATCAAACT 59.126 34.615 0.00 0.00 0.00 2.66
3000 6597 6.183360 CGCAACTAAAATGGGCTAAATCAAAC 60.183 38.462 0.00 0.00 0.00 2.93
3001 6598 5.866633 CGCAACTAAAATGGGCTAAATCAAA 59.133 36.000 0.00 0.00 0.00 2.69
3002 6599 5.047660 ACGCAACTAAAATGGGCTAAATCAA 60.048 36.000 0.00 0.00 34.37 2.57
3003 6600 4.461081 ACGCAACTAAAATGGGCTAAATCA 59.539 37.500 0.00 0.00 34.37 2.57
3004 6601 4.993905 ACGCAACTAAAATGGGCTAAATC 58.006 39.130 0.00 0.00 34.37 2.17
3005 6602 5.047660 TCAACGCAACTAAAATGGGCTAAAT 60.048 36.000 0.00 0.00 34.37 1.40
3006 6603 4.278669 TCAACGCAACTAAAATGGGCTAAA 59.721 37.500 0.00 0.00 34.37 1.85
3007 6604 3.821600 TCAACGCAACTAAAATGGGCTAA 59.178 39.130 0.00 0.00 34.37 3.09
3008 6605 3.413327 TCAACGCAACTAAAATGGGCTA 58.587 40.909 0.00 0.00 34.37 3.93
3009 6606 2.235016 TCAACGCAACTAAAATGGGCT 58.765 42.857 0.00 0.00 34.37 5.19
3010 6607 2.715737 TCAACGCAACTAAAATGGGC 57.284 45.000 0.00 0.00 34.37 5.36
3011 6608 5.575218 GGTTATTCAACGCAACTAAAATGGG 59.425 40.000 0.00 0.00 35.34 4.00
3012 6609 6.307800 CAGGTTATTCAACGCAACTAAAATGG 59.692 38.462 0.00 0.00 35.34 3.16
3013 6610 6.861055 ACAGGTTATTCAACGCAACTAAAATG 59.139 34.615 0.00 0.00 35.34 2.32
3014 6611 6.977213 ACAGGTTATTCAACGCAACTAAAAT 58.023 32.000 0.00 0.00 35.34 1.82
3015 6612 6.038382 TGACAGGTTATTCAACGCAACTAAAA 59.962 34.615 0.00 0.00 35.34 1.52
3016 6613 5.527951 TGACAGGTTATTCAACGCAACTAAA 59.472 36.000 0.00 0.00 35.34 1.85
3017 6614 5.057819 TGACAGGTTATTCAACGCAACTAA 58.942 37.500 0.00 0.00 35.34 2.24
3018 6615 4.633175 TGACAGGTTATTCAACGCAACTA 58.367 39.130 0.00 0.00 35.34 2.24
3019 6616 3.472652 TGACAGGTTATTCAACGCAACT 58.527 40.909 0.00 0.00 35.34 3.16
3020 6617 3.889196 TGACAGGTTATTCAACGCAAC 57.111 42.857 0.00 0.00 35.34 4.17
3021 6618 4.217754 GTTGACAGGTTATTCAACGCAA 57.782 40.909 0.00 0.00 41.55 4.85
3022 6619 3.889196 GTTGACAGGTTATTCAACGCA 57.111 42.857 0.00 0.00 41.55 5.24
3026 6623 7.925483 CCTGAATTTTGTTGACAGGTTATTCAA 59.075 33.333 0.00 0.00 41.91 2.69
3027 6624 7.432869 CCTGAATTTTGTTGACAGGTTATTCA 58.567 34.615 0.00 0.00 41.91 2.57
3028 6625 6.366061 GCCTGAATTTTGTTGACAGGTTATTC 59.634 38.462 0.00 0.00 46.55 1.75
3029 6626 6.041979 AGCCTGAATTTTGTTGACAGGTTATT 59.958 34.615 0.00 0.00 46.55 1.40
3030 6627 5.539955 AGCCTGAATTTTGTTGACAGGTTAT 59.460 36.000 0.00 0.00 46.55 1.89
3031 6628 4.892934 AGCCTGAATTTTGTTGACAGGTTA 59.107 37.500 0.00 0.00 46.55 2.85
3032 6629 3.706086 AGCCTGAATTTTGTTGACAGGTT 59.294 39.130 0.00 0.00 46.55 3.50
3033 6630 3.299503 AGCCTGAATTTTGTTGACAGGT 58.700 40.909 0.00 0.00 46.55 4.00
3035 6632 3.318839 TGGAGCCTGAATTTTGTTGACAG 59.681 43.478 0.00 0.00 0.00 3.51
3036 6633 3.295093 TGGAGCCTGAATTTTGTTGACA 58.705 40.909 0.00 0.00 0.00 3.58
3037 6634 4.051237 GTTGGAGCCTGAATTTTGTTGAC 58.949 43.478 0.00 0.00 0.00 3.18
3038 6635 3.703556 TGTTGGAGCCTGAATTTTGTTGA 59.296 39.130 0.00 0.00 0.00 3.18
3039 6636 4.053295 CTGTTGGAGCCTGAATTTTGTTG 58.947 43.478 0.00 0.00 0.00 3.33
3040 6637 3.706086 ACTGTTGGAGCCTGAATTTTGTT 59.294 39.130 0.00 0.00 0.00 2.83
3041 6638 3.068590 CACTGTTGGAGCCTGAATTTTGT 59.931 43.478 0.00 0.00 0.00 2.83
3042 6639 3.645884 CACTGTTGGAGCCTGAATTTTG 58.354 45.455 0.00 0.00 0.00 2.44
3065 6671 7.862372 TGATGTGCAGAAACAAGATTTTAGTTC 59.138 33.333 0.00 0.00 32.81 3.01
3070 6676 7.496591 ACAAATGATGTGCAGAAACAAGATTTT 59.503 29.630 0.00 0.00 41.93 1.82
3090 6696 9.128107 GTCATGTACAAAACCTGAATACAAATG 57.872 33.333 0.00 0.00 34.94 2.32
3147 6988 4.058817 CACCAGTTTCAGACAACTCCTAC 58.941 47.826 0.00 0.00 34.60 3.18
3150 6991 2.919228 ACACCAGTTTCAGACAACTCC 58.081 47.619 0.00 0.00 34.60 3.85
3151 6992 5.179555 GGATTACACCAGTTTCAGACAACTC 59.820 44.000 0.00 0.00 34.60 3.01
3152 6993 5.063880 GGATTACACCAGTTTCAGACAACT 58.936 41.667 0.00 0.00 37.49 3.16
3153 6994 4.084013 CGGATTACACCAGTTTCAGACAAC 60.084 45.833 0.00 0.00 0.00 3.32
3154 6995 4.062293 CGGATTACACCAGTTTCAGACAA 58.938 43.478 0.00 0.00 0.00 3.18
3155 6996 3.556213 CCGGATTACACCAGTTTCAGACA 60.556 47.826 0.00 0.00 0.00 3.41
3156 6997 3.000727 CCGGATTACACCAGTTTCAGAC 58.999 50.000 0.00 0.00 0.00 3.51
3157 6998 2.635915 ACCGGATTACACCAGTTTCAGA 59.364 45.455 9.46 0.00 0.00 3.27
3158 6999 3.053831 ACCGGATTACACCAGTTTCAG 57.946 47.619 9.46 0.00 0.00 3.02
3159 7000 3.833650 TCTACCGGATTACACCAGTTTCA 59.166 43.478 9.46 0.00 0.00 2.69
3160 7001 4.460948 TCTACCGGATTACACCAGTTTC 57.539 45.455 9.46 0.00 0.00 2.78
3161 7002 4.895668 TTCTACCGGATTACACCAGTTT 57.104 40.909 9.46 0.00 0.00 2.66
3162 7003 4.895668 TTTCTACCGGATTACACCAGTT 57.104 40.909 9.46 0.00 0.00 3.16
3163 7004 4.285260 ACTTTTCTACCGGATTACACCAGT 59.715 41.667 9.46 0.00 0.00 4.00
3164 7005 4.828829 ACTTTTCTACCGGATTACACCAG 58.171 43.478 9.46 0.00 0.00 4.00
3165 7006 4.895668 ACTTTTCTACCGGATTACACCA 57.104 40.909 9.46 0.00 0.00 4.17
3176 7053 9.112725 TCAACCAACTACTTTTACTTTTCTACC 57.887 33.333 0.00 0.00 0.00 3.18
3199 7097 6.295249 TCCACATGACATCTACAGTTTTCAA 58.705 36.000 0.00 0.00 0.00 2.69
3206 7104 8.667076 TTGATAAATCCACATGACATCTACAG 57.333 34.615 0.00 0.00 0.00 2.74
3300 7255 8.588290 TTGGCCTTTTAGCTTCTATAATTTCA 57.412 30.769 3.32 0.00 0.00 2.69
3430 7385 3.371102 TCCATGCACGACTAGATTAGC 57.629 47.619 0.00 0.00 0.00 3.09
3473 7428 0.834612 ACAACTCCCAAGTCCGAACA 59.165 50.000 0.00 0.00 33.48 3.18
3529 7484 3.356290 GCACCTACTGTTTCCATCCAAT 58.644 45.455 0.00 0.00 0.00 3.16
3541 7496 2.425143 AATCCACATGGCACCTACTG 57.575 50.000 0.00 0.00 34.44 2.74
3627 7582 4.693283 TCCATAATTTCTACTGGCGTCAG 58.307 43.478 17.12 17.12 46.10 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.