Multiple sequence alignment - TraesCS2A01G079400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G079400 chr2A 100.000 4364 0 0 1 4364 36041234 36045597 0.000000e+00 8059.0
1 TraesCS2A01G079400 chr2D 88.898 2414 153 59 473 2839 32793000 32795345 0.000000e+00 2867.0
2 TraesCS2A01G079400 chr2D 89.942 865 51 10 3288 4152 32796160 32796988 0.000000e+00 1083.0
3 TraesCS2A01G079400 chr2D 94.515 474 23 2 1 474 32792561 32793031 0.000000e+00 728.0
4 TraesCS2A01G079400 chr2D 88.312 77 8 1 1946 2022 32794275 32794350 1.670000e-14 91.6
5 TraesCS2A01G079400 chr2B 85.561 2050 162 56 785 2778 54533390 54535361 0.000000e+00 2023.0
6 TraesCS2A01G079400 chr2B 87.277 786 47 14 3288 4073 54536256 54536988 0.000000e+00 848.0
7 TraesCS2A01G079400 chr2B 93.886 458 28 0 1 458 54532595 54533052 0.000000e+00 691.0
8 TraesCS2A01G079400 chr2B 90.123 81 6 2 1946 2025 54534344 54534423 2.150000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G079400 chr2A 36041234 36045597 4363 False 8059.0 8059 100.00000 1 4364 1 chr2A.!!$F1 4363
1 TraesCS2A01G079400 chr2D 32792561 32796988 4427 False 1192.4 2867 90.41675 1 4152 4 chr2D.!!$F1 4151
2 TraesCS2A01G079400 chr2B 54532595 54536988 4393 False 916.5 2023 89.21175 1 4073 4 chr2B.!!$F1 4072

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
204 205 0.037877 AGAACTGGAGCAGCTGCATT 59.962 50.0 38.24 21.1 45.16 3.56 F
912 982 0.106519 CCCATCCAAACCCAGCTAGG 60.107 60.0 0.00 0.0 37.03 3.02 F
2132 2247 0.032952 TTACACCCGTGACTGACTGC 59.967 55.0 0.96 0.0 0.00 4.40 F
2457 2577 0.107703 GCTGGGGTTCATGTGATCGA 60.108 55.0 0.00 0.0 0.00 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2120 2233 0.039978 AGAACTCGCAGTCAGTCACG 60.040 55.0 0.00 0.00 0.00 4.35 R
2348 2466 0.178891 AGGACTGGTCACTGGTGGAT 60.179 55.0 3.10 0.00 0.00 3.41 R
3175 3826 0.167908 TGCCAAAGATAAACGCGCAG 59.832 50.0 5.73 2.42 0.00 5.18 R
4153 4804 0.036306 CACCCTTACCGGTTGCTCTT 59.964 55.0 15.04 0.00 32.17 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 4.794648 CAATGGAGGCGGCCCGAA 62.795 66.667 17.02 0.83 35.76 4.30
158 159 2.125753 GAGTGCAGCGGAGACAGG 60.126 66.667 0.00 0.00 0.00 4.00
172 173 3.385384 CAGGCCGGAGCTGACTCA 61.385 66.667 5.05 0.00 45.42 3.41
179 180 0.318441 CGGAGCTGACTCAGGAAACA 59.682 55.000 8.17 0.00 45.42 2.83
180 181 1.802069 GGAGCTGACTCAGGAAACAC 58.198 55.000 8.17 0.00 45.42 3.32
204 205 0.037877 AGAACTGGAGCAGCTGCATT 59.962 50.000 38.24 21.10 45.16 3.56
260 261 2.037901 TGCCCAATTCTCAAGCAAACA 58.962 42.857 0.00 0.00 0.00 2.83
281 282 0.326904 TGGATGATCCTCAGGTGGCT 60.327 55.000 13.44 0.00 37.46 4.75
398 399 2.190841 CAACCACGCCCTTCGGTTT 61.191 57.895 0.00 0.00 41.07 3.27
456 457 7.336931 GGTGAATGATGATGATGATGATGATGA 59.663 37.037 0.00 0.00 0.00 2.92
457 458 8.897752 GTGAATGATGATGATGATGATGATGAT 58.102 33.333 0.00 0.00 0.00 2.45
458 459 8.896744 TGAATGATGATGATGATGATGATGATG 58.103 33.333 0.00 0.00 0.00 3.07
459 460 9.113838 GAATGATGATGATGATGATGATGATGA 57.886 33.333 0.00 0.00 0.00 2.92
460 461 9.638176 AATGATGATGATGATGATGATGATGAT 57.362 29.630 0.00 0.00 0.00 2.45
461 462 8.442632 TGATGATGATGATGATGATGATGATG 57.557 34.615 0.00 0.00 0.00 3.07
462 463 8.267183 TGATGATGATGATGATGATGATGATGA 58.733 33.333 0.00 0.00 0.00 2.92
463 464 9.282569 GATGATGATGATGATGATGATGATGAT 57.717 33.333 0.00 0.00 0.00 2.45
464 465 9.638176 ATGATGATGATGATGATGATGATGATT 57.362 29.630 0.00 0.00 0.00 2.57
465 466 9.113838 TGATGATGATGATGATGATGATGATTC 57.886 33.333 0.00 0.00 0.00 2.52
466 467 9.336171 GATGATGATGATGATGATGATGATTCT 57.664 33.333 0.00 0.00 0.00 2.40
467 468 8.723942 TGATGATGATGATGATGATGATTCTC 57.276 34.615 0.00 0.00 0.00 2.87
468 469 7.770897 TGATGATGATGATGATGATGATTCTCC 59.229 37.037 0.00 0.00 0.00 3.71
469 470 7.016153 TGATGATGATGATGATGATTCTCCA 57.984 36.000 0.00 0.00 0.00 3.86
470 471 7.106239 TGATGATGATGATGATGATTCTCCAG 58.894 38.462 0.00 0.00 0.00 3.86
471 472 5.246307 TGATGATGATGATGATTCTCCAGC 58.754 41.667 0.00 0.00 0.00 4.85
472 473 4.976540 TGATGATGATGATTCTCCAGCT 57.023 40.909 0.00 0.00 0.00 4.24
473 474 4.642429 TGATGATGATGATTCTCCAGCTG 58.358 43.478 6.78 6.78 0.00 4.24
474 475 4.347000 TGATGATGATGATTCTCCAGCTGA 59.653 41.667 17.39 0.00 0.00 4.26
475 476 4.976540 TGATGATGATTCTCCAGCTGAT 57.023 40.909 17.39 0.00 0.00 2.90
476 477 4.642429 TGATGATGATTCTCCAGCTGATG 58.358 43.478 17.39 7.47 0.00 3.07
477 478 4.347000 TGATGATGATTCTCCAGCTGATGA 59.653 41.667 17.39 9.96 0.00 2.92
478 479 4.976540 TGATGATTCTCCAGCTGATGAT 57.023 40.909 17.39 0.00 0.00 2.45
479 480 4.642429 TGATGATTCTCCAGCTGATGATG 58.358 43.478 17.39 0.00 0.00 3.07
480 481 4.347000 TGATGATTCTCCAGCTGATGATGA 59.653 41.667 17.39 1.92 0.00 2.92
481 482 4.976540 TGATTCTCCAGCTGATGATGAT 57.023 40.909 17.39 4.20 0.00 2.45
482 483 4.642429 TGATTCTCCAGCTGATGATGATG 58.358 43.478 17.39 0.00 0.00 3.07
483 484 4.347000 TGATTCTCCAGCTGATGATGATGA 59.653 41.667 17.39 0.00 0.00 2.92
484 485 4.976540 TTCTCCAGCTGATGATGATGAT 57.023 40.909 17.39 0.00 0.00 2.45
485 486 4.273148 TCTCCAGCTGATGATGATGATG 57.727 45.455 17.39 0.00 0.00 3.07
486 487 3.901844 TCTCCAGCTGATGATGATGATGA 59.098 43.478 17.39 0.00 0.00 2.92
487 488 4.532521 TCTCCAGCTGATGATGATGATGAT 59.467 41.667 17.39 0.00 0.00 2.45
488 489 4.579869 TCCAGCTGATGATGATGATGATG 58.420 43.478 17.39 0.00 0.00 3.07
489 490 4.286032 TCCAGCTGATGATGATGATGATGA 59.714 41.667 17.39 0.00 0.00 2.92
490 491 5.045578 TCCAGCTGATGATGATGATGATGAT 60.046 40.000 17.39 0.00 0.00 2.45
525 526 4.401525 CTGTCTTCAGCTTGCAACTTAG 57.598 45.455 0.00 0.00 34.79 2.18
526 527 2.549754 TGTCTTCAGCTTGCAACTTAGC 59.450 45.455 0.00 0.00 37.66 3.09
571 578 4.526650 TGTACATACTTCTGCCACTTCTGA 59.473 41.667 0.00 0.00 0.00 3.27
616 623 2.632512 TGTAGGTCAGTGCAGTGAATGA 59.367 45.455 25.45 10.70 0.00 2.57
617 624 3.261643 TGTAGGTCAGTGCAGTGAATGAT 59.738 43.478 25.45 13.64 0.00 2.45
618 625 3.430042 AGGTCAGTGCAGTGAATGATT 57.570 42.857 25.45 7.17 0.00 2.57
692 702 6.045318 TGTTCATTGGTGGTATTTTTGTGTG 58.955 36.000 0.00 0.00 0.00 3.82
698 708 3.005367 GGTGGTATTTTTGTGTGGTCTGG 59.995 47.826 0.00 0.00 0.00 3.86
857 926 7.307455 GCTGCTTAGGCTGAATATAAGTTACAC 60.307 40.741 7.94 0.00 39.31 2.90
865 935 4.340666 TGAATATAAGTTACACGGGCCGTA 59.659 41.667 33.65 15.50 38.32 4.02
870 940 0.179153 GTTACACGGGCCGTACTCTC 60.179 60.000 33.65 16.90 38.32 3.20
902 972 2.247358 GAGGACAAAAGCCCATCCAAA 58.753 47.619 0.00 0.00 33.33 3.28
912 982 0.106519 CCCATCCAAACCCAGCTAGG 60.107 60.000 0.00 0.00 37.03 3.02
916 986 1.133809 TCCAAACCCAGCTAGGCACT 61.134 55.000 0.00 0.00 46.37 4.40
991 1073 1.308216 CCCCAATCCCACTCCTCCT 60.308 63.158 0.00 0.00 0.00 3.69
1485 1567 5.103129 TCAGTTTTCCCATCCCATTCCATAT 60.103 40.000 0.00 0.00 0.00 1.78
1486 1568 6.103946 TCAGTTTTCCCATCCCATTCCATATA 59.896 38.462 0.00 0.00 0.00 0.86
1489 1571 8.018450 AGTTTTCCCATCCCATTCCATATAATT 58.982 33.333 0.00 0.00 0.00 1.40
1492 1574 6.973642 TCCCATCCCATTCCATATAATTCTC 58.026 40.000 0.00 0.00 0.00 2.87
1493 1575 6.741922 TCCCATCCCATTCCATATAATTCTCT 59.258 38.462 0.00 0.00 0.00 3.10
1565 1667 5.964958 TTTTGTGGTGATGATTCTTCTCC 57.035 39.130 11.71 11.71 0.00 3.71
1572 1674 4.202409 GGTGATGATTCTTCTCCTTAGGGG 60.202 50.000 11.46 0.00 0.00 4.79
1573 1675 4.656112 GTGATGATTCTTCTCCTTAGGGGA 59.344 45.833 0.00 0.00 42.77 4.81
1574 1676 5.309282 GTGATGATTCTTCTCCTTAGGGGAT 59.691 44.000 0.00 0.00 44.15 3.85
1675 1784 8.361139 ACAAAAATTGTTTCGGGTGATACATTA 58.639 29.630 0.00 0.00 42.22 1.90
1686 1795 5.393866 GGGTGATACATTACATTGGGGAAT 58.606 41.667 0.00 0.00 0.00 3.01
1713 1822 5.127194 AGCATGATTCTCTGATGTGCAATTT 59.873 36.000 0.00 0.00 33.80 1.82
1751 1860 7.489160 TCCTTACATTACATGCTAGTGTAGTG 58.511 38.462 11.95 11.95 43.70 2.74
1756 1865 7.036220 ACATTACATGCTAGTGTAGTGTCTTC 58.964 38.462 12.91 0.00 46.18 2.87
1791 1901 1.207811 TGCGATGGAAAGCTCAGATCA 59.792 47.619 0.00 0.00 0.00 2.92
1803 1913 4.775236 AGCTCAGATCAATGGTTTACTCC 58.225 43.478 0.00 0.00 0.00 3.85
1925 2038 7.492077 AGTAATACTACATTACATAGGGGCC 57.508 40.000 0.00 0.00 37.05 5.80
1927 2040 1.975680 ACTACATTACATAGGGGCCCG 59.024 52.381 18.95 5.52 0.00 6.13
1932 2045 0.253610 TTACATAGGGGCCCGTGTTG 59.746 55.000 32.02 23.81 31.79 3.33
1942 2055 1.457009 GCCCGTGTTGCCCTTTTACA 61.457 55.000 0.00 0.00 0.00 2.41
1943 2056 1.253100 CCCGTGTTGCCCTTTTACAT 58.747 50.000 0.00 0.00 0.00 2.29
1944 2057 1.067915 CCCGTGTTGCCCTTTTACATG 60.068 52.381 0.00 0.00 0.00 3.21
1945 2058 1.668628 CCGTGTTGCCCTTTTACATGC 60.669 52.381 0.00 0.00 0.00 4.06
1946 2059 1.269448 CGTGTTGCCCTTTTACATGCT 59.731 47.619 0.00 0.00 0.00 3.79
1974 2087 8.314751 ACATTACATGCTAGTGTAGTTTCTTCT 58.685 33.333 0.00 0.00 36.08 2.85
1977 2090 5.482175 ACATGCTAGTGTAGTTTCTTCTCCT 59.518 40.000 0.00 0.00 0.00 3.69
1978 2091 6.014156 ACATGCTAGTGTAGTTTCTTCTCCTT 60.014 38.462 0.00 0.00 0.00 3.36
2018 2131 1.483415 GCCCGGAGTCTATGGTTTACA 59.517 52.381 0.73 0.00 0.00 2.41
2032 2145 3.714798 TGGTTTACACTTCTCTCCCAACT 59.285 43.478 0.00 0.00 0.00 3.16
2112 2225 0.759346 AAGAAGTCAGGTCCGTGCTT 59.241 50.000 0.00 0.00 0.00 3.91
2119 2232 0.872388 CAGGTCCGTGCTTTTACACC 59.128 55.000 0.00 0.00 37.25 4.16
2120 2233 0.250597 AGGTCCGTGCTTTTACACCC 60.251 55.000 0.00 0.00 37.25 4.61
2132 2247 0.032952 TTACACCCGTGACTGACTGC 59.967 55.000 0.96 0.00 0.00 4.40
2147 2262 5.583495 ACTGACTGCGAGTTCTGATTATAC 58.417 41.667 0.00 0.00 0.00 1.47
2164 2281 8.803201 TGATTATACAGTGAATCTTCATCGTC 57.197 34.615 0.00 0.00 39.73 4.20
2166 2283 9.469807 GATTATACAGTGAATCTTCATCGTCTT 57.530 33.333 0.00 0.00 39.73 3.01
2178 2295 7.925043 TCTTCATCGTCTTACTTCTCTAACT 57.075 36.000 0.00 0.00 0.00 2.24
2344 2462 5.437263 GCATTTGCAACTCATTCTGTTTTG 58.563 37.500 0.00 0.00 41.59 2.44
2346 2464 3.731652 TGCAACTCATTCTGTTTTGGG 57.268 42.857 0.00 0.00 0.00 4.12
2347 2465 2.364970 TGCAACTCATTCTGTTTTGGGG 59.635 45.455 0.00 0.00 0.00 4.96
2348 2466 2.627699 GCAACTCATTCTGTTTTGGGGA 59.372 45.455 0.00 0.00 0.00 4.81
2349 2467 3.259123 GCAACTCATTCTGTTTTGGGGAT 59.741 43.478 0.00 0.00 0.00 3.85
2350 2468 4.619160 GCAACTCATTCTGTTTTGGGGATC 60.619 45.833 0.00 0.00 0.00 3.36
2352 2470 3.075882 ACTCATTCTGTTTTGGGGATCCA 59.924 43.478 15.23 0.00 42.25 3.41
2353 2471 3.430453 TCATTCTGTTTTGGGGATCCAC 58.570 45.455 15.23 11.51 43.94 4.02
2355 2473 1.153539 TCTGTTTTGGGGATCCACCA 58.846 50.000 12.68 14.53 43.94 4.17
2357 2475 0.856982 TGTTTTGGGGATCCACCAGT 59.143 50.000 12.68 0.00 43.94 4.00
2358 2476 1.256812 GTTTTGGGGATCCACCAGTG 58.743 55.000 12.68 0.00 43.94 3.66
2359 2477 1.153539 TTTTGGGGATCCACCAGTGA 58.846 50.000 12.68 5.01 43.94 3.41
2361 2479 1.497309 TTGGGGATCCACCAGTGACC 61.497 60.000 12.68 1.63 43.94 4.02
2362 2480 1.923395 GGGGATCCACCAGTGACCA 60.923 63.158 15.23 0.00 41.20 4.02
2364 2482 1.201429 GGGATCCACCAGTGACCAGT 61.201 60.000 15.23 0.00 41.20 4.00
2365 2483 0.250513 GGATCCACCAGTGACCAGTC 59.749 60.000 6.95 0.00 38.79 3.51
2366 2484 0.250513 GATCCACCAGTGACCAGTCC 59.749 60.000 0.00 0.00 0.00 3.85
2367 2485 0.178891 ATCCACCAGTGACCAGTCCT 60.179 55.000 0.00 0.00 0.00 3.85
2368 2486 0.399949 TCCACCAGTGACCAGTCCTT 60.400 55.000 0.00 0.00 0.00 3.36
2369 2487 0.250467 CCACCAGTGACCAGTCCTTG 60.250 60.000 0.00 0.00 0.00 3.61
2396 2514 9.490663 GTGCTATACTGCTATTAACTTGTTTTG 57.509 33.333 0.00 0.00 0.00 2.44
2457 2577 0.107703 GCTGGGGTTCATGTGATCGA 60.108 55.000 0.00 0.00 0.00 3.59
2460 2580 0.810031 GGGGTTCATGTGATCGACGG 60.810 60.000 0.00 0.00 0.00 4.79
2569 3021 3.636300 TCCATCCTTTGTTTTGTCACCTG 59.364 43.478 0.00 0.00 0.00 4.00
2571 3023 4.141959 CCATCCTTTGTTTTGTCACCTGTT 60.142 41.667 0.00 0.00 0.00 3.16
2572 3024 5.418676 CATCCTTTGTTTTGTCACCTGTTT 58.581 37.500 0.00 0.00 0.00 2.83
2574 3026 4.770010 TCCTTTGTTTTGTCACCTGTTTCT 59.230 37.500 0.00 0.00 0.00 2.52
2577 3029 5.713792 TTGTTTTGTCACCTGTTTCTTCA 57.286 34.783 0.00 0.00 0.00 3.02
2580 3032 7.397892 TGTTTTGTCACCTGTTTCTTCATTA 57.602 32.000 0.00 0.00 0.00 1.90
2581 3033 7.831753 TGTTTTGTCACCTGTTTCTTCATTAA 58.168 30.769 0.00 0.00 0.00 1.40
2582 3034 7.973388 TGTTTTGTCACCTGTTTCTTCATTAAG 59.027 33.333 0.00 0.00 0.00 1.85
2583 3035 7.873719 TTTGTCACCTGTTTCTTCATTAAGA 57.126 32.000 0.00 0.00 40.03 2.10
2584 3036 6.861065 TGTCACCTGTTTCTTCATTAAGAC 57.139 37.500 0.00 0.00 41.48 3.01
2585 3037 6.591935 TGTCACCTGTTTCTTCATTAAGACT 58.408 36.000 0.00 0.00 41.48 3.24
2586 3038 7.054124 TGTCACCTGTTTCTTCATTAAGACTT 58.946 34.615 0.00 0.00 41.48 3.01
2587 3039 7.012327 TGTCACCTGTTTCTTCATTAAGACTTG 59.988 37.037 0.00 0.00 41.48 3.16
2588 3040 6.486657 TCACCTGTTTCTTCATTAAGACTTGG 59.513 38.462 0.00 0.00 41.48 3.61
2589 3041 6.486657 CACCTGTTTCTTCATTAAGACTTGGA 59.513 38.462 0.00 0.00 41.48 3.53
2590 3042 7.175641 CACCTGTTTCTTCATTAAGACTTGGAT 59.824 37.037 0.00 0.00 41.48 3.41
2591 3043 8.383175 ACCTGTTTCTTCATTAAGACTTGGATA 58.617 33.333 0.00 0.00 41.48 2.59
2592 3044 9.231297 CCTGTTTCTTCATTAAGACTTGGATAA 57.769 33.333 0.00 0.00 41.48 1.75
2596 3048 9.753674 TTTCTTCATTAAGACTTGGATAATGGT 57.246 29.630 0.00 0.00 41.48 3.55
2597 3049 8.964476 TCTTCATTAAGACTTGGATAATGGTC 57.036 34.615 0.00 0.00 36.80 4.02
2598 3050 8.772250 TCTTCATTAAGACTTGGATAATGGTCT 58.228 33.333 0.00 0.00 36.80 3.85
2599 3051 8.964476 TTCATTAAGACTTGGATAATGGTCTC 57.036 34.615 0.00 0.00 37.97 3.36
2615 3067 0.534412 TCTCTTGCTCTGCCTGTAGC 59.466 55.000 0.00 0.00 44.14 3.58
2624 3076 1.630369 TCTGCCTGTAGCTTTGTGGAT 59.370 47.619 0.00 0.00 44.23 3.41
2662 3114 5.175388 AGTATGTTCCCCTAGGTGTTTTC 57.825 43.478 8.29 0.00 0.00 2.29
2681 3133 8.220755 TGTTTTCACATAAGAAGCTTTACAGT 57.779 30.769 0.00 0.00 0.00 3.55
2716 3168 6.078202 TGAATTGATGCCGAAGTGTAAAAA 57.922 33.333 0.00 0.00 0.00 1.94
2734 3186 8.135529 GTGTAAAAACTTCCTGAGTAAGCAAAT 58.864 33.333 0.00 0.00 37.72 2.32
2738 3190 7.530426 AAACTTCCTGAGTAAGCAAATGATT 57.470 32.000 0.00 0.00 37.72 2.57
2744 3196 9.733556 TTCCTGAGTAAGCAAATGATTTAGTTA 57.266 29.630 0.00 0.00 0.00 2.24
2748 3200 9.905713 TGAGTAAGCAAATGATTTAGTTAGGAT 57.094 29.630 0.00 0.00 0.00 3.24
2756 3208 9.189156 CAAATGATTTAGTTAGGATCTTCCCAA 57.811 33.333 0.00 0.00 37.19 4.12
2764 3216 7.142995 AGTTAGGATCTTCCCAATAGAAAGG 57.857 40.000 0.00 0.00 37.19 3.11
2778 3230 7.201821 CCCAATAGAAAGGATGTTACATTGGTC 60.202 40.741 0.00 0.00 39.55 4.02
2779 3231 7.339212 CCAATAGAAAGGATGTTACATTGGTCA 59.661 37.037 0.00 0.00 37.47 4.02
2781 3233 9.479549 AATAGAAAGGATGTTACATTGGTCATT 57.520 29.630 0.00 0.00 0.00 2.57
2782 3234 7.161773 AGAAAGGATGTTACATTGGTCATTG 57.838 36.000 0.00 0.00 0.00 2.82
2784 3236 3.701040 AGGATGTTACATTGGTCATTGGC 59.299 43.478 0.00 0.00 0.00 4.52
2785 3237 3.446873 GGATGTTACATTGGTCATTGGCA 59.553 43.478 0.00 0.00 0.00 4.92
2786 3238 3.932545 TGTTACATTGGTCATTGGCAC 57.067 42.857 0.00 0.00 0.00 5.01
2805 3257 5.542251 TGGCACTATATATGGCAGTCTTGTA 59.458 40.000 13.59 0.00 46.63 2.41
2817 3269 6.182627 TGGCAGTCTTGTATGATGAAGAAAT 58.817 36.000 0.00 0.00 30.08 2.17
2840 3292 6.778834 TGATGAATTTCAAGGTATGCACAT 57.221 33.333 2.68 0.00 0.00 3.21
2842 3294 8.291191 TGATGAATTTCAAGGTATGCACATAA 57.709 30.769 2.68 0.00 0.00 1.90
2853 3305 8.721478 CAAGGTATGCACATAATATGTAGTTCC 58.279 37.037 5.49 5.82 42.70 3.62
2854 3306 7.973402 AGGTATGCACATAATATGTAGTTCCA 58.027 34.615 5.49 0.07 42.70 3.53
2855 3307 8.436778 AGGTATGCACATAATATGTAGTTCCAA 58.563 33.333 5.49 0.00 42.70 3.53
2857 3309 9.878599 GTATGCACATAATATGTAGTTCCAAAC 57.121 33.333 5.49 0.00 42.70 2.93
2858 3310 7.328277 TGCACATAATATGTAGTTCCAAACC 57.672 36.000 5.49 0.00 42.70 3.27
2859 3311 6.887002 TGCACATAATATGTAGTTCCAAACCA 59.113 34.615 5.49 0.00 42.70 3.67
2860 3312 7.066887 TGCACATAATATGTAGTTCCAAACCAG 59.933 37.037 5.49 0.00 42.70 4.00
2861 3313 7.282224 GCACATAATATGTAGTTCCAAACCAGA 59.718 37.037 5.49 0.00 42.70 3.86
2862 3314 9.342308 CACATAATATGTAGTTCCAAACCAGAT 57.658 33.333 5.49 0.00 42.70 2.90
2863 3315 9.920946 ACATAATATGTAGTTCCAAACCAGATT 57.079 29.630 3.75 0.00 42.78 2.40
2870 3337 7.691213 TGTAGTTCCAAACCAGATTACCAATA 58.309 34.615 0.00 0.00 0.00 1.90
2873 3340 4.519213 TCCAAACCAGATTACCAATACGG 58.481 43.478 0.00 0.00 42.50 4.02
2891 3358 4.893424 ACGGTACAATGCCATGTTAATC 57.107 40.909 0.00 0.00 34.75 1.75
2893 3360 4.947388 ACGGTACAATGCCATGTTAATCTT 59.053 37.500 0.00 0.00 34.75 2.40
2896 3363 5.359576 GGTACAATGCCATGTTAATCTTGGA 59.640 40.000 11.56 0.00 41.99 3.53
2929 3396 2.880890 GCCACAGAAGTTCACAGAACAT 59.119 45.455 11.92 0.11 0.00 2.71
2946 3413 6.015095 ACAGAACATTGTGAGATCTGTACTGA 60.015 38.462 16.51 4.80 46.43 3.41
2956 3423 3.261897 AGATCTGTACTGACCCAAGGTTG 59.738 47.826 4.39 0.00 35.25 3.77
2959 3426 2.301870 CTGTACTGACCCAAGGTTGCTA 59.698 50.000 0.00 0.00 35.25 3.49
2960 3427 2.910319 TGTACTGACCCAAGGTTGCTAT 59.090 45.455 0.00 0.00 35.25 2.97
2962 3429 4.532916 TGTACTGACCCAAGGTTGCTATAA 59.467 41.667 0.00 0.00 35.25 0.98
2965 3432 5.390387 ACTGACCCAAGGTTGCTATAAAAA 58.610 37.500 0.00 0.00 35.25 1.94
2966 3433 6.016555 ACTGACCCAAGGTTGCTATAAAAAT 58.983 36.000 0.00 0.00 35.25 1.82
2967 3434 6.152831 ACTGACCCAAGGTTGCTATAAAAATC 59.847 38.462 0.00 0.00 35.25 2.17
2995 3462 3.424703 TCCAGAAATCTTGCAGAAAGGG 58.575 45.455 0.00 0.00 36.46 3.95
3011 3478 4.746309 GGCCATGTGCTGCCTCCA 62.746 66.667 0.00 0.00 44.46 3.86
3022 3489 0.610174 CTGCCTCCAGTGCTTACTGA 59.390 55.000 8.89 0.00 39.99 3.41
3036 3503 5.065218 GTGCTTACTGACATGATGGTTAAGG 59.935 44.000 0.00 0.00 0.00 2.69
3044 3511 6.980593 TGACATGATGGTTAAGGTTTTTGAG 58.019 36.000 0.00 0.00 0.00 3.02
3045 3512 6.549364 TGACATGATGGTTAAGGTTTTTGAGT 59.451 34.615 0.00 0.00 0.00 3.41
3046 3513 6.981722 ACATGATGGTTAAGGTTTTTGAGTC 58.018 36.000 0.00 0.00 0.00 3.36
3047 3514 6.015434 ACATGATGGTTAAGGTTTTTGAGTCC 60.015 38.462 0.00 0.00 0.00 3.85
3048 3515 5.701224 TGATGGTTAAGGTTTTTGAGTCCT 58.299 37.500 0.00 0.00 0.00 3.85
3072 3723 7.395190 TCCAAGTGTTTGATATGATTTCTGG 57.605 36.000 0.00 0.00 36.36 3.86
3081 3732 4.576053 TGATATGATTTCTGGCTGGTTTCG 59.424 41.667 0.00 0.00 0.00 3.46
3086 3737 4.020928 TGATTTCTGGCTGGTTTCGTACTA 60.021 41.667 0.00 0.00 0.00 1.82
3088 3739 2.799017 TCTGGCTGGTTTCGTACTAGA 58.201 47.619 0.00 0.00 37.53 2.43
3089 3740 3.159472 TCTGGCTGGTTTCGTACTAGAA 58.841 45.455 0.00 0.00 37.53 2.10
3098 3749 7.275888 TGGTTTCGTACTAGAAAGTCACTAA 57.724 36.000 0.00 0.00 40.34 2.24
3099 3750 7.141363 TGGTTTCGTACTAGAAAGTCACTAAC 58.859 38.462 0.00 0.00 40.34 2.34
3100 3751 7.013655 TGGTTTCGTACTAGAAAGTCACTAACT 59.986 37.037 0.00 0.00 40.34 2.24
3101 3752 8.507249 GGTTTCGTACTAGAAAGTCACTAACTA 58.493 37.037 0.00 0.00 40.34 2.24
3106 3757 7.851963 CGTACTAGAAAGTCACTAACTATCTGC 59.148 40.741 0.00 0.00 37.17 4.26
3109 3760 5.415221 AGAAAGTCACTAACTATCTGCAGC 58.585 41.667 9.47 0.00 37.17 5.25
3111 3762 4.383850 AGTCACTAACTATCTGCAGCAG 57.616 45.455 17.10 17.10 36.07 4.24
3164 3815 7.030768 CACACACATGATGCATTCAGAATTTA 58.969 34.615 0.00 0.00 37.89 1.40
3171 3822 9.542462 CATGATGCATTCAGAATTTATTTTCCT 57.458 29.630 0.00 0.00 37.89 3.36
3175 3826 7.037438 TGCATTCAGAATTTATTTTCCTGAGC 58.963 34.615 0.00 0.00 0.00 4.26
3178 3829 6.199937 TCAGAATTTATTTTCCTGAGCTGC 57.800 37.500 0.00 0.00 0.00 5.25
3184 3835 1.444119 TTTTCCTGAGCTGCGCGTTT 61.444 50.000 8.43 0.00 0.00 3.60
3187 3838 0.806102 TCCTGAGCTGCGCGTTTATC 60.806 55.000 8.43 2.05 0.00 1.75
3196 3847 0.796870 GCGCGTTTATCTTTGGCACC 60.797 55.000 8.43 0.00 0.00 5.01
3199 3850 2.030457 CGCGTTTATCTTTGGCACCTAG 59.970 50.000 0.00 0.00 0.00 3.02
3200 3851 2.223272 GCGTTTATCTTTGGCACCTAGC 60.223 50.000 0.00 0.00 44.65 3.42
3202 3853 4.439057 CGTTTATCTTTGGCACCTAGCTA 58.561 43.478 0.00 0.00 44.79 3.32
3203 3854 5.057149 CGTTTATCTTTGGCACCTAGCTAT 58.943 41.667 0.00 0.00 44.79 2.97
3205 3856 6.145696 CGTTTATCTTTGGCACCTAGCTATAC 59.854 42.308 0.00 0.00 44.79 1.47
3207 3858 5.630415 ATCTTTGGCACCTAGCTATACAA 57.370 39.130 0.00 0.00 44.79 2.41
3208 3859 5.429681 TCTTTGGCACCTAGCTATACAAA 57.570 39.130 0.00 1.69 44.79 2.83
3209 3860 5.811190 TCTTTGGCACCTAGCTATACAAAA 58.189 37.500 0.00 0.00 44.79 2.44
3210 3861 5.646360 TCTTTGGCACCTAGCTATACAAAAC 59.354 40.000 0.00 0.00 44.79 2.43
3211 3862 3.881220 TGGCACCTAGCTATACAAAACC 58.119 45.455 0.00 0.00 44.79 3.27
3212 3863 3.211865 GGCACCTAGCTATACAAAACCC 58.788 50.000 0.00 0.00 44.79 4.11
3217 3868 6.371825 GCACCTAGCTATACAAAACCCATATC 59.628 42.308 0.00 0.00 41.15 1.63
3219 3870 6.269307 ACCTAGCTATACAAAACCCATATCGT 59.731 38.462 0.00 0.00 0.00 3.73
3235 3886 5.289675 CCATATCGTGTTCAGTTGAGAAGTC 59.710 44.000 0.00 0.00 0.00 3.01
3236 3887 4.592485 ATCGTGTTCAGTTGAGAAGTCT 57.408 40.909 0.00 0.00 0.00 3.24
3238 3889 5.707242 TCGTGTTCAGTTGAGAAGTCTAT 57.293 39.130 0.00 0.00 0.00 1.98
3239 3890 6.085555 TCGTGTTCAGTTGAGAAGTCTATT 57.914 37.500 0.00 0.00 0.00 1.73
3240 3891 7.210718 TCGTGTTCAGTTGAGAAGTCTATTA 57.789 36.000 0.00 0.00 0.00 0.98
3243 3894 8.376203 CGTGTTCAGTTGAGAAGTCTATTAATG 58.624 37.037 0.00 0.00 0.00 1.90
3244 3895 8.171840 GTGTTCAGTTGAGAAGTCTATTAATGC 58.828 37.037 0.00 0.00 0.00 3.56
3245 3896 7.877612 TGTTCAGTTGAGAAGTCTATTAATGCA 59.122 33.333 0.00 0.00 0.00 3.96
3246 3897 8.887717 GTTCAGTTGAGAAGTCTATTAATGCAT 58.112 33.333 0.00 0.00 0.00 3.96
3248 3899 9.755804 TCAGTTGAGAAGTCTATTAATGCATAG 57.244 33.333 0.00 0.00 0.00 2.23
3249 3900 9.539825 CAGTTGAGAAGTCTATTAATGCATAGT 57.460 33.333 0.00 0.00 0.00 2.12
3296 3947 7.516198 AAGCTATATTTGGATTGTGGATGTC 57.484 36.000 0.00 0.00 0.00 3.06
3307 3958 5.998363 GGATTGTGGATGTCTAATTACTCCC 59.002 44.000 0.00 0.00 0.00 4.30
3308 3959 6.409234 GGATTGTGGATGTCTAATTACTCCCA 60.409 42.308 0.00 0.00 0.00 4.37
3403 4054 3.876274 TCTGGCTGAGACACTAATCAC 57.124 47.619 0.00 0.00 0.00 3.06
3404 4055 3.165071 TCTGGCTGAGACACTAATCACA 58.835 45.455 0.00 0.00 0.00 3.58
3405 4056 3.771479 TCTGGCTGAGACACTAATCACAT 59.229 43.478 0.00 0.00 0.00 3.21
3406 4057 4.223700 TCTGGCTGAGACACTAATCACATT 59.776 41.667 0.00 0.00 0.00 2.71
3407 4058 5.422012 TCTGGCTGAGACACTAATCACATTA 59.578 40.000 0.00 0.00 0.00 1.90
3448 4099 8.306313 TGGTGAACTGAAGACTGTATATACAT 57.694 34.615 15.81 6.75 35.36 2.29
3485 4136 1.878953 AAACAGCGAGGTACAAGTGG 58.121 50.000 0.00 0.00 0.00 4.00
3486 4137 0.034896 AACAGCGAGGTACAAGTGGG 59.965 55.000 0.00 0.00 0.00 4.61
3540 4191 2.595124 TGTGAGCTCACTCGTTTTCA 57.405 45.000 38.81 19.58 46.69 2.69
3548 4199 3.666374 GCTCACTCGTTTTCAGATGCTTG 60.666 47.826 0.00 0.00 0.00 4.01
3556 4207 4.214119 CGTTTTCAGATGCTTGGAGAAAGA 59.786 41.667 0.00 0.00 38.24 2.52
3562 4213 0.392706 TGCTTGGAGAAAGAGCGTCA 59.607 50.000 0.00 0.00 38.24 4.35
3563 4214 0.793250 GCTTGGAGAAAGAGCGTCAC 59.207 55.000 0.00 0.00 38.24 3.67
3567 4218 0.318784 GGAGAAAGAGCGTCACGTGT 60.319 55.000 16.51 0.00 0.00 4.49
3648 4299 4.193826 TGAGAATGTCAACTGCTACCTC 57.806 45.455 0.00 0.00 29.64 3.85
3649 4300 3.578282 TGAGAATGTCAACTGCTACCTCA 59.422 43.478 0.00 0.00 29.64 3.86
3650 4301 4.180057 GAGAATGTCAACTGCTACCTCAG 58.820 47.826 0.00 0.00 39.86 3.35
3651 4302 7.806695 TGAGAATGTCAACTGCTACCTCAGC 62.807 48.000 0.00 0.00 40.88 4.26
3676 4327 1.002888 CAGCCACTGTGGATCTCTGTT 59.997 52.381 30.23 1.89 40.96 3.16
3690 4341 6.894654 TGGATCTCTGTTGACTCTAGATTCTT 59.105 38.462 11.02 0.00 0.00 2.52
3708 4359 8.242729 AGATTCTTGTTTTTGGATCTCAGTTT 57.757 30.769 0.00 0.00 0.00 2.66
3709 4360 9.354673 AGATTCTTGTTTTTGGATCTCAGTTTA 57.645 29.630 0.00 0.00 0.00 2.01
3710 4361 9.617975 GATTCTTGTTTTTGGATCTCAGTTTAG 57.382 33.333 0.00 0.00 0.00 1.85
3711 4362 6.970484 TCTTGTTTTTGGATCTCAGTTTAGC 58.030 36.000 0.00 0.00 0.00 3.09
3712 4363 6.772716 TCTTGTTTTTGGATCTCAGTTTAGCT 59.227 34.615 0.00 0.00 0.00 3.32
3713 4364 6.317789 TGTTTTTGGATCTCAGTTTAGCTG 57.682 37.500 0.00 0.00 46.34 4.24
3830 4481 1.811558 CGATGCCCGGTGAATCAGATT 60.812 52.381 0.00 0.00 33.91 2.40
3870 4521 4.041723 GTCGATTGTTTCAGTTGTTTGGG 58.958 43.478 0.00 0.00 0.00 4.12
3893 4544 1.751351 CGTCCCTTCAGAGATGCAGTA 59.249 52.381 0.00 0.00 0.00 2.74
3895 4546 1.759445 TCCCTTCAGAGATGCAGTAGC 59.241 52.381 0.00 0.00 42.57 3.58
3925 4576 6.643360 TGATGCACATTTCTTCTGTCATTTTG 59.357 34.615 0.00 0.00 0.00 2.44
3982 4633 2.363788 TCCTCTGAAACGTCGGAATG 57.636 50.000 0.00 0.00 38.73 2.67
3989 4640 3.670625 TGAAACGTCGGAATGGATTTCT 58.329 40.909 0.00 0.00 34.56 2.52
4046 4697 5.010112 TCGGCAGGTTAATGAATTTGTTTGA 59.990 36.000 0.00 0.00 0.00 2.69
4064 4715 7.287512 TGTTTGATCAATCAAGAATGGACAA 57.712 32.000 15.27 0.00 46.34 3.18
4067 4718 6.505044 TGATCAATCAAGAATGGACAACTG 57.495 37.500 0.00 0.00 33.08 3.16
4073 4724 8.423349 TCAATCAAGAATGGACAACTGAAAAAT 58.577 29.630 0.00 0.00 0.00 1.82
4100 4751 5.712152 AAATAAAAAGTGGACAGCTCAGG 57.288 39.130 0.00 0.00 0.00 3.86
4101 4752 4.640771 ATAAAAAGTGGACAGCTCAGGA 57.359 40.909 0.00 0.00 0.00 3.86
4124 4775 0.252197 GTGCAAGGGACGGATAACCT 59.748 55.000 0.00 0.00 35.78 3.50
4137 4788 3.824443 CGGATAACCTTTTGTCCACCTTT 59.176 43.478 1.73 0.00 41.95 3.11
4138 4789 4.082949 CGGATAACCTTTTGTCCACCTTTC 60.083 45.833 1.73 0.00 41.95 2.62
4139 4790 4.830600 GGATAACCTTTTGTCCACCTTTCA 59.169 41.667 0.00 0.00 41.57 2.69
4140 4791 5.480422 GGATAACCTTTTGTCCACCTTTCAT 59.520 40.000 0.00 0.00 41.57 2.57
4142 4793 3.230976 ACCTTTTGTCCACCTTTCATCC 58.769 45.455 0.00 0.00 0.00 3.51
4143 4794 3.117131 ACCTTTTGTCCACCTTTCATCCT 60.117 43.478 0.00 0.00 0.00 3.24
4144 4795 3.507622 CCTTTTGTCCACCTTTCATCCTC 59.492 47.826 0.00 0.00 0.00 3.71
4145 4796 3.874383 TTTGTCCACCTTTCATCCTCA 57.126 42.857 0.00 0.00 0.00 3.86
4170 4821 1.905637 AAAAGAGCAACCGGTAAGGG 58.094 50.000 8.00 0.00 46.96 3.95
4171 4822 0.769247 AAAGAGCAACCGGTAAGGGT 59.231 50.000 8.00 6.35 46.96 4.34
4176 4827 3.990815 AACCGGTAAGGGTGTGGT 58.009 55.556 8.00 0.00 46.96 4.16
4177 4828 1.452801 AACCGGTAAGGGTGTGGTG 59.547 57.895 8.00 0.00 46.96 4.17
4178 4829 2.359478 CCGGTAAGGGTGTGGTGC 60.359 66.667 0.00 0.00 35.97 5.01
4179 4830 2.359478 CGGTAAGGGTGTGGTGCC 60.359 66.667 0.00 0.00 0.00 5.01
4180 4831 2.840576 GGTAAGGGTGTGGTGCCA 59.159 61.111 0.00 0.00 0.00 4.92
4181 4832 1.382629 GGTAAGGGTGTGGTGCCAT 59.617 57.895 0.00 0.00 0.00 4.40
4182 4833 0.965363 GGTAAGGGTGTGGTGCCATG 60.965 60.000 0.00 0.00 0.00 3.66
4183 4834 0.251165 GTAAGGGTGTGGTGCCATGT 60.251 55.000 0.00 0.00 0.00 3.21
4184 4835 1.003812 GTAAGGGTGTGGTGCCATGTA 59.996 52.381 0.00 0.00 0.00 2.29
4185 4836 0.251165 AAGGGTGTGGTGCCATGTAC 60.251 55.000 0.00 0.00 0.00 2.90
4186 4837 1.133809 AGGGTGTGGTGCCATGTACT 61.134 55.000 0.00 0.00 0.00 2.73
4187 4838 0.616371 GGGTGTGGTGCCATGTACTA 59.384 55.000 0.00 0.00 0.00 1.82
4188 4839 1.003812 GGGTGTGGTGCCATGTACTAA 59.996 52.381 0.00 0.00 0.00 2.24
4189 4840 2.356741 GGGTGTGGTGCCATGTACTAAT 60.357 50.000 0.00 0.00 0.00 1.73
4190 4841 3.118186 GGGTGTGGTGCCATGTACTAATA 60.118 47.826 0.00 0.00 0.00 0.98
4191 4842 4.445735 GGGTGTGGTGCCATGTACTAATAT 60.446 45.833 0.00 0.00 0.00 1.28
4192 4843 4.515191 GGTGTGGTGCCATGTACTAATATG 59.485 45.833 0.00 0.00 0.00 1.78
4193 4844 4.515191 GTGTGGTGCCATGTACTAATATGG 59.485 45.833 5.73 5.73 44.93 2.74
4194 4845 4.072131 GTGGTGCCATGTACTAATATGGG 58.928 47.826 10.93 0.00 42.96 4.00
4195 4846 3.719479 TGGTGCCATGTACTAATATGGGT 59.281 43.478 10.93 0.00 42.96 4.51
4196 4847 4.908481 TGGTGCCATGTACTAATATGGGTA 59.092 41.667 10.93 0.00 42.96 3.69
4197 4848 5.369993 TGGTGCCATGTACTAATATGGGTAA 59.630 40.000 10.93 0.00 42.96 2.85
4198 4849 5.938125 GGTGCCATGTACTAATATGGGTAAG 59.062 44.000 10.93 0.00 42.96 2.34
4199 4850 6.465321 GGTGCCATGTACTAATATGGGTAAGT 60.465 42.308 10.93 0.00 42.96 2.24
4200 4851 6.996282 GTGCCATGTACTAATATGGGTAAGTT 59.004 38.462 10.93 0.00 42.96 2.66
4201 4852 7.501225 GTGCCATGTACTAATATGGGTAAGTTT 59.499 37.037 10.93 0.00 42.96 2.66
4202 4853 7.717875 TGCCATGTACTAATATGGGTAAGTTTC 59.282 37.037 10.93 0.00 42.96 2.78
4203 4854 7.717875 GCCATGTACTAATATGGGTAAGTTTCA 59.282 37.037 10.93 0.00 42.96 2.69
4204 4855 9.621629 CCATGTACTAATATGGGTAAGTTTCAA 57.378 33.333 2.63 0.00 39.94 2.69
4247 4898 4.906065 GGTAACCCCATTTTTATCGACC 57.094 45.455 0.00 0.00 0.00 4.79
4248 4899 3.313249 GGTAACCCCATTTTTATCGACCG 59.687 47.826 0.00 0.00 0.00 4.79
4249 4900 3.353370 AACCCCATTTTTATCGACCGA 57.647 42.857 0.00 0.00 0.00 4.69
4250 4901 3.570912 ACCCCATTTTTATCGACCGAT 57.429 42.857 9.93 9.93 38.54 4.18
4251 4902 3.211045 ACCCCATTTTTATCGACCGATG 58.789 45.455 14.42 0.00 36.17 3.84
4252 4903 3.211045 CCCCATTTTTATCGACCGATGT 58.789 45.455 14.42 0.00 36.17 3.06
4253 4904 3.003275 CCCCATTTTTATCGACCGATGTG 59.997 47.826 14.42 6.06 36.17 3.21
4254 4905 3.874543 CCCATTTTTATCGACCGATGTGA 59.125 43.478 14.42 0.00 36.17 3.58
4255 4906 4.515191 CCCATTTTTATCGACCGATGTGAT 59.485 41.667 14.42 1.98 36.17 3.06
4256 4907 5.443261 CCATTTTTATCGACCGATGTGATG 58.557 41.667 14.42 11.83 36.17 3.07
4257 4908 5.443261 CATTTTTATCGACCGATGTGATGG 58.557 41.667 14.42 0.00 36.17 3.51
4258 4909 3.812156 TTTATCGACCGATGTGATGGT 57.188 42.857 14.42 0.00 42.42 3.55
4259 4910 4.922471 TTTATCGACCGATGTGATGGTA 57.078 40.909 14.42 0.00 38.99 3.25
4260 4911 5.462530 TTTATCGACCGATGTGATGGTAT 57.537 39.130 14.42 0.00 38.99 2.73
4261 4912 5.462530 TTATCGACCGATGTGATGGTATT 57.537 39.130 14.42 0.00 38.99 1.89
4262 4913 3.092334 TCGACCGATGTGATGGTATTG 57.908 47.619 0.00 0.00 38.99 1.90
4263 4914 2.135139 CGACCGATGTGATGGTATTGG 58.865 52.381 0.00 0.00 38.99 3.16
4264 4915 2.494059 GACCGATGTGATGGTATTGGG 58.506 52.381 0.00 0.00 38.99 4.12
4265 4916 1.142870 ACCGATGTGATGGTATTGGGG 59.857 52.381 0.00 0.00 36.50 4.96
4266 4917 1.419762 CCGATGTGATGGTATTGGGGA 59.580 52.381 0.00 0.00 0.00 4.81
4267 4918 2.494059 CGATGTGATGGTATTGGGGAC 58.506 52.381 0.00 0.00 0.00 4.46
4268 4919 2.494059 GATGTGATGGTATTGGGGACG 58.506 52.381 0.00 0.00 0.00 4.79
4269 4920 1.574263 TGTGATGGTATTGGGGACGA 58.426 50.000 0.00 0.00 0.00 4.20
4270 4921 2.123589 TGTGATGGTATTGGGGACGAT 58.876 47.619 0.00 0.00 38.31 3.73
4271 4922 3.310193 TGTGATGGTATTGGGGACGATA 58.690 45.455 0.00 0.00 35.53 2.92
4272 4923 3.323691 TGTGATGGTATTGGGGACGATAG 59.676 47.826 0.00 0.00 37.37 2.08
4305 4956 8.608185 AATCAAGTCCAATGTTATATTTGGGT 57.392 30.769 4.44 0.00 42.21 4.51
4306 4957 7.403312 TCAAGTCCAATGTTATATTTGGGTG 57.597 36.000 4.44 2.12 42.21 4.61
4307 4958 7.178573 TCAAGTCCAATGTTATATTTGGGTGA 58.821 34.615 4.44 3.96 42.21 4.02
4308 4959 7.339212 TCAAGTCCAATGTTATATTTGGGTGAG 59.661 37.037 4.44 0.00 42.21 3.51
4309 4960 6.731467 AGTCCAATGTTATATTTGGGTGAGT 58.269 36.000 4.44 0.00 42.21 3.41
4310 4961 6.603201 AGTCCAATGTTATATTTGGGTGAGTG 59.397 38.462 4.44 0.00 42.21 3.51
4311 4962 6.377146 GTCCAATGTTATATTTGGGTGAGTGT 59.623 38.462 4.44 0.00 42.21 3.55
4312 4963 6.601613 TCCAATGTTATATTTGGGTGAGTGTC 59.398 38.462 4.44 0.00 42.21 3.67
4313 4964 6.603201 CCAATGTTATATTTGGGTGAGTGTCT 59.397 38.462 0.00 0.00 38.98 3.41
4314 4965 7.415541 CCAATGTTATATTTGGGTGAGTGTCTG 60.416 40.741 0.00 0.00 38.98 3.51
4315 4966 6.367374 TGTTATATTTGGGTGAGTGTCTGA 57.633 37.500 0.00 0.00 0.00 3.27
4316 4967 6.406370 TGTTATATTTGGGTGAGTGTCTGAG 58.594 40.000 0.00 0.00 0.00 3.35
4317 4968 6.013725 TGTTATATTTGGGTGAGTGTCTGAGT 60.014 38.462 0.00 0.00 0.00 3.41
4318 4969 2.620251 TTTGGGTGAGTGTCTGAGTG 57.380 50.000 0.00 0.00 0.00 3.51
4319 4970 1.496060 TTGGGTGAGTGTCTGAGTGT 58.504 50.000 0.00 0.00 0.00 3.55
4320 4971 2.375014 TGGGTGAGTGTCTGAGTGTA 57.625 50.000 0.00 0.00 0.00 2.90
4321 4972 2.889512 TGGGTGAGTGTCTGAGTGTAT 58.110 47.619 0.00 0.00 0.00 2.29
4322 4973 2.562738 TGGGTGAGTGTCTGAGTGTATG 59.437 50.000 0.00 0.00 0.00 2.39
4323 4974 2.093973 GGGTGAGTGTCTGAGTGTATGG 60.094 54.545 0.00 0.00 0.00 2.74
4324 4975 2.563179 GGTGAGTGTCTGAGTGTATGGT 59.437 50.000 0.00 0.00 0.00 3.55
4325 4976 3.006967 GGTGAGTGTCTGAGTGTATGGTT 59.993 47.826 0.00 0.00 0.00 3.67
4326 4977 4.219944 GGTGAGTGTCTGAGTGTATGGTTA 59.780 45.833 0.00 0.00 0.00 2.85
4327 4978 5.279306 GGTGAGTGTCTGAGTGTATGGTTAA 60.279 44.000 0.00 0.00 0.00 2.01
4328 4979 6.398918 GTGAGTGTCTGAGTGTATGGTTAAT 58.601 40.000 0.00 0.00 0.00 1.40
4329 4980 7.363530 GGTGAGTGTCTGAGTGTATGGTTAATA 60.364 40.741 0.00 0.00 0.00 0.98
4330 4981 8.033038 GTGAGTGTCTGAGTGTATGGTTAATAA 58.967 37.037 0.00 0.00 0.00 1.40
4331 4982 8.758829 TGAGTGTCTGAGTGTATGGTTAATAAT 58.241 33.333 0.00 0.00 0.00 1.28
4346 4997 8.228035 TGGTTAATAATAATAGTGTTGGTGGC 57.772 34.615 0.00 0.00 0.00 5.01
4347 4998 8.056400 TGGTTAATAATAATAGTGTTGGTGGCT 58.944 33.333 0.00 0.00 0.00 4.75
4348 4999 9.563748 GGTTAATAATAATAGTGTTGGTGGCTA 57.436 33.333 0.00 0.00 0.00 3.93
4355 5006 6.942532 AATAGTGTTGGTGGCTATAACATG 57.057 37.500 6.23 0.00 36.78 3.21
4356 5007 4.301072 AGTGTTGGTGGCTATAACATGT 57.699 40.909 0.00 0.00 36.78 3.21
4357 5008 4.662278 AGTGTTGGTGGCTATAACATGTT 58.338 39.130 16.68 16.68 36.78 2.71
4358 5009 5.811190 AGTGTTGGTGGCTATAACATGTTA 58.189 37.500 20.14 20.14 36.78 2.41
4359 5010 6.242396 AGTGTTGGTGGCTATAACATGTTAA 58.758 36.000 21.57 10.48 36.78 2.01
4360 5011 6.150474 AGTGTTGGTGGCTATAACATGTTAAC 59.850 38.462 21.57 14.23 36.78 2.01
4361 5012 6.004574 TGTTGGTGGCTATAACATGTTAACA 58.995 36.000 21.57 15.98 30.06 2.41
4362 5013 6.661377 TGTTGGTGGCTATAACATGTTAACAT 59.339 34.615 21.57 15.47 36.96 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 1.946475 GCCCGAACTCCGCTAGTCTT 61.946 60.000 0.00 0.00 37.50 3.01
120 121 2.416432 GCCCGAACTCCGCTAGTCT 61.416 63.158 0.00 0.00 37.50 3.24
122 123 2.362632 AGCCCGAACTCCGCTAGT 60.363 61.111 0.00 0.00 41.49 2.57
158 159 2.172483 TTTCCTGAGTCAGCTCCGGC 62.172 60.000 15.10 0.00 43.29 6.13
172 173 3.228453 TCCAGTTCTCGTAGTGTTTCCT 58.772 45.455 0.00 0.00 0.00 3.36
176 177 1.961394 TGCTCCAGTTCTCGTAGTGTT 59.039 47.619 0.00 0.00 0.00 3.32
179 180 0.528470 GCTGCTCCAGTTCTCGTAGT 59.472 55.000 0.00 0.00 33.43 2.73
180 181 0.814457 AGCTGCTCCAGTTCTCGTAG 59.186 55.000 0.00 0.00 33.43 3.51
392 393 0.400213 AGTCCTGAATGGCAAACCGA 59.600 50.000 0.00 0.00 39.70 4.69
456 457 4.976540 TCATCAGCTGGAGAATCATCAT 57.023 40.909 15.13 0.00 36.25 2.45
457 458 4.347000 TCATCATCAGCTGGAGAATCATCA 59.653 41.667 15.13 0.00 36.25 3.07
458 459 4.895961 TCATCATCAGCTGGAGAATCATC 58.104 43.478 15.13 0.00 36.25 2.92
459 460 4.976540 TCATCATCAGCTGGAGAATCAT 57.023 40.909 15.13 0.00 36.25 2.45
460 461 4.347000 TCATCATCATCAGCTGGAGAATCA 59.653 41.667 15.13 0.00 36.25 2.57
461 462 4.895961 TCATCATCATCAGCTGGAGAATC 58.104 43.478 15.13 0.00 0.00 2.52
462 463 4.976540 TCATCATCATCAGCTGGAGAAT 57.023 40.909 15.13 0.00 0.00 2.40
463 464 4.347000 TCATCATCATCATCAGCTGGAGAA 59.653 41.667 15.13 0.00 0.00 2.87
464 465 3.901844 TCATCATCATCATCAGCTGGAGA 59.098 43.478 15.13 12.54 0.00 3.71
465 466 4.273148 TCATCATCATCATCAGCTGGAG 57.727 45.455 15.13 6.94 0.00 3.86
466 467 4.286032 TCATCATCATCATCATCAGCTGGA 59.714 41.667 15.13 4.27 0.00 3.86
467 468 4.579869 TCATCATCATCATCATCAGCTGG 58.420 43.478 15.13 0.00 0.00 4.85
468 469 5.877012 TCATCATCATCATCATCATCAGCTG 59.123 40.000 7.63 7.63 0.00 4.24
469 470 6.054860 TCATCATCATCATCATCATCAGCT 57.945 37.500 0.00 0.00 0.00 4.24
470 471 6.934048 ATCATCATCATCATCATCATCAGC 57.066 37.500 0.00 0.00 0.00 4.26
471 472 8.729805 AGAATCATCATCATCATCATCATCAG 57.270 34.615 0.00 0.00 0.00 2.90
472 473 7.770897 GGAGAATCATCATCATCATCATCATCA 59.229 37.037 0.00 0.00 36.25 3.07
473 474 7.770897 TGGAGAATCATCATCATCATCATCATC 59.229 37.037 0.00 0.00 36.25 2.92
474 475 7.633789 TGGAGAATCATCATCATCATCATCAT 58.366 34.615 0.00 0.00 36.25 2.45
475 476 7.016153 TGGAGAATCATCATCATCATCATCA 57.984 36.000 0.00 0.00 36.25 3.07
476 477 6.037720 GCTGGAGAATCATCATCATCATCATC 59.962 42.308 0.00 0.00 36.25 2.92
477 478 5.883115 GCTGGAGAATCATCATCATCATCAT 59.117 40.000 0.00 0.00 36.25 2.45
478 479 5.013183 AGCTGGAGAATCATCATCATCATCA 59.987 40.000 0.00 0.00 36.25 3.07
479 480 5.352846 CAGCTGGAGAATCATCATCATCATC 59.647 44.000 5.57 0.00 36.25 2.92
480 481 5.249420 CAGCTGGAGAATCATCATCATCAT 58.751 41.667 5.57 0.00 36.25 2.45
481 482 4.642429 CAGCTGGAGAATCATCATCATCA 58.358 43.478 5.57 0.00 36.25 3.07
482 483 3.437395 GCAGCTGGAGAATCATCATCATC 59.563 47.826 17.12 0.00 36.25 2.92
483 484 3.073209 AGCAGCTGGAGAATCATCATCAT 59.927 43.478 17.12 0.00 36.25 2.45
484 485 2.438392 AGCAGCTGGAGAATCATCATCA 59.562 45.455 17.12 0.00 36.25 3.07
485 486 2.809119 CAGCAGCTGGAGAATCATCATC 59.191 50.000 17.12 0.00 36.25 2.92
486 487 2.172930 ACAGCAGCTGGAGAATCATCAT 59.827 45.455 26.38 0.00 36.25 2.45
487 488 1.558294 ACAGCAGCTGGAGAATCATCA 59.442 47.619 26.38 0.00 36.25 3.07
488 489 2.158928 AGACAGCAGCTGGAGAATCATC 60.159 50.000 26.38 11.82 36.25 2.92
489 490 1.838715 AGACAGCAGCTGGAGAATCAT 59.161 47.619 26.38 2.19 36.25 2.45
490 491 1.273759 AGACAGCAGCTGGAGAATCA 58.726 50.000 26.38 0.00 36.25 2.57
523 524 4.791334 AGGAGGGCTCTACATATCTAGCTA 59.209 45.833 0.00 0.00 35.30 3.32
524 525 3.596046 AGGAGGGCTCTACATATCTAGCT 59.404 47.826 0.00 0.00 35.30 3.32
525 526 3.699038 CAGGAGGGCTCTACATATCTAGC 59.301 52.174 0.00 0.00 0.00 3.42
526 527 4.704540 CACAGGAGGGCTCTACATATCTAG 59.295 50.000 0.00 0.00 0.00 2.43
657 667 9.784531 ATACCACCAATGAACAGAGAATAATAG 57.215 33.333 0.00 0.00 0.00 1.73
662 672 7.781324 AAAATACCACCAATGAACAGAGAAT 57.219 32.000 0.00 0.00 0.00 2.40
740 759 6.717084 ACCTTGGTATCCTGAAAGAAAGAAAG 59.283 38.462 0.00 0.00 34.07 2.62
759 779 6.165577 CCATGTTTAATGGAAGAAACCTTGG 58.834 40.000 0.00 0.00 41.64 3.61
857 926 3.141488 AGCAGAGAGTACGGCCCG 61.141 66.667 0.00 0.00 0.00 6.13
865 935 1.228894 TCCCGGTTCAGCAGAGAGT 60.229 57.895 0.00 0.00 0.00 3.24
870 940 2.111999 TTGTCCTCCCGGTTCAGCAG 62.112 60.000 0.00 0.00 0.00 4.24
902 972 3.775654 GCGAGTGCCTAGCTGGGT 61.776 66.667 18.47 0.00 36.00 4.51
912 982 0.440371 CGAGAAAGGAAAGCGAGTGC 59.560 55.000 0.00 0.00 43.24 4.40
916 986 3.122948 CGAAATTCGAGAAAGGAAAGCGA 59.877 43.478 10.18 0.00 43.74 4.93
991 1073 4.077184 GTCGTCCATGGCGGTGGA 62.077 66.667 22.59 7.28 45.78 4.02
1458 1540 4.584743 GGAATGGGATGGGAAAACTGATAC 59.415 45.833 0.00 0.00 0.00 2.24
1464 1546 7.797121 ATTATATGGAATGGGATGGGAAAAC 57.203 36.000 0.00 0.00 0.00 2.43
1467 1549 7.242527 AGAGAATTATATGGAATGGGATGGGAA 59.757 37.037 0.00 0.00 0.00 3.97
1485 1567 1.134280 GCAGGCAGGCAGAGAGAATTA 60.134 52.381 0.00 0.00 0.00 1.40
1486 1568 0.394080 GCAGGCAGGCAGAGAGAATT 60.394 55.000 0.00 0.00 0.00 2.17
1489 1571 3.397439 GGCAGGCAGGCAGAGAGA 61.397 66.667 0.00 0.00 43.51 3.10
1551 1653 4.895836 TCCCCTAAGGAGAAGAATCATCA 58.104 43.478 0.00 0.00 40.93 3.07
1565 1667 2.806244 CGGCGAATTTACATCCCCTAAG 59.194 50.000 0.00 0.00 0.00 2.18
1572 1674 3.309954 AGCTTTCTCGGCGAATTTACATC 59.690 43.478 12.13 0.00 34.52 3.06
1573 1675 3.270877 AGCTTTCTCGGCGAATTTACAT 58.729 40.909 12.13 0.00 34.52 2.29
1574 1676 2.695359 AGCTTTCTCGGCGAATTTACA 58.305 42.857 12.13 0.00 34.52 2.41
1634 1736 6.018832 ACAATTTTTGTTCAACAGCAGCATAC 60.019 34.615 0.00 0.00 42.22 2.39
1675 1784 3.104519 TCATGCTTGATTCCCCAATGT 57.895 42.857 0.00 0.00 0.00 2.71
1686 1795 3.626217 GCACATCAGAGAATCATGCTTGA 59.374 43.478 4.57 4.57 37.82 3.02
1713 1822 1.001068 TGTAAGGAATGCCACGACGAA 59.999 47.619 0.00 0.00 36.29 3.85
1751 1860 3.056821 GCAAGTACAAAATGGGGGAAGAC 60.057 47.826 0.00 0.00 0.00 3.01
1756 1865 1.540267 TCGCAAGTACAAAATGGGGG 58.460 50.000 0.00 0.00 39.48 5.40
1791 1901 2.556622 CAAACGCCAGGAGTAAACCATT 59.443 45.455 0.00 0.00 0.00 3.16
1803 1913 2.074230 TTTGCAGCTCCAAACGCCAG 62.074 55.000 0.00 0.00 30.28 4.85
1880 1993 9.860898 ATTACTTGAATAATTTCTTTCACCAGC 57.139 29.630 0.00 0.00 31.87 4.85
1925 2038 1.668628 GCATGTAAAAGGGCAACACGG 60.669 52.381 0.00 0.00 39.74 4.94
1927 2040 3.385193 AAGCATGTAAAAGGGCAACAC 57.615 42.857 0.00 0.00 39.74 3.32
1932 2045 6.202516 TGTAATGTAAGCATGTAAAAGGGC 57.797 37.500 0.00 0.00 35.15 5.19
1986 2099 3.204827 CCGGGCTTTCCATCGCAG 61.205 66.667 0.00 0.00 34.36 5.18
1996 2109 1.286248 AAACCATAGACTCCGGGCTT 58.714 50.000 0.00 0.00 0.00 4.35
2112 2225 1.539496 GCAGTCAGTCACGGGTGTAAA 60.539 52.381 0.00 0.00 0.00 2.01
2119 2232 1.004277 GAACTCGCAGTCAGTCACGG 61.004 60.000 0.00 0.00 0.00 4.94
2120 2233 0.039978 AGAACTCGCAGTCAGTCACG 60.040 55.000 0.00 0.00 0.00 4.35
2132 2247 8.864069 AAGATTCACTGTATAATCAGAACTCG 57.136 34.615 14.06 0.00 38.63 4.18
2147 2262 7.032580 AGAAGTAAGACGATGAAGATTCACTG 58.967 38.462 0.00 0.00 40.49 3.66
2164 2281 6.605594 ACCCTGAGATGAGTTAGAGAAGTAAG 59.394 42.308 0.00 0.00 0.00 2.34
2166 2283 5.888724 CACCCTGAGATGAGTTAGAGAAGTA 59.111 44.000 0.00 0.00 0.00 2.24
2178 2295 4.934797 ATTTTTCTCCACCCTGAGATGA 57.065 40.909 0.00 0.00 40.89 2.92
2233 2350 7.397221 TGTCATCAAATTCAATAGAGTGGTCT 58.603 34.615 0.00 0.00 36.75 3.85
2273 2390 3.251729 GCTCTGACAAGAAATTCAGCACA 59.748 43.478 0.00 0.00 39.36 4.57
2344 2462 1.915078 CTGGTCACTGGTGGATCCCC 61.915 65.000 9.90 10.76 34.77 4.81
2346 2464 0.250513 GACTGGTCACTGGTGGATCC 59.749 60.000 4.20 4.20 0.00 3.36
2347 2465 0.250513 GGACTGGTCACTGGTGGATC 59.749 60.000 3.10 0.00 0.00 3.36
2348 2466 0.178891 AGGACTGGTCACTGGTGGAT 60.179 55.000 3.10 0.00 0.00 3.41
2349 2467 0.399949 AAGGACTGGTCACTGGTGGA 60.400 55.000 3.10 0.00 0.00 4.02
2350 2468 0.250467 CAAGGACTGGTCACTGGTGG 60.250 60.000 3.10 0.00 0.00 4.61
2352 2470 2.145865 CCAAGGACTGGTCACTGGT 58.854 57.895 10.37 0.00 40.78 4.00
2361 2479 2.169352 AGCAGTATAGCACCAAGGACTG 59.831 50.000 0.00 0.00 37.85 3.51
2362 2480 2.472029 AGCAGTATAGCACCAAGGACT 58.528 47.619 0.00 0.00 36.85 3.85
2364 2482 6.326583 AGTTAATAGCAGTATAGCACCAAGGA 59.673 38.462 0.00 0.00 36.85 3.36
2365 2483 6.525629 AGTTAATAGCAGTATAGCACCAAGG 58.474 40.000 0.00 0.00 36.85 3.61
2366 2484 7.495934 ACAAGTTAATAGCAGTATAGCACCAAG 59.504 37.037 0.00 0.00 36.85 3.61
2367 2485 7.335627 ACAAGTTAATAGCAGTATAGCACCAA 58.664 34.615 0.00 0.00 36.85 3.67
2368 2486 6.884832 ACAAGTTAATAGCAGTATAGCACCA 58.115 36.000 0.00 0.00 36.85 4.17
2369 2487 7.787725 AACAAGTTAATAGCAGTATAGCACC 57.212 36.000 0.00 0.00 36.85 5.01
2370 2488 9.490663 CAAAACAAGTTAATAGCAGTATAGCAC 57.509 33.333 0.00 0.00 36.85 4.40
2371 2489 9.226606 ACAAAACAAGTTAATAGCAGTATAGCA 57.773 29.630 0.00 0.00 36.85 3.49
2372 2490 9.704098 GACAAAACAAGTTAATAGCAGTATAGC 57.296 33.333 0.00 0.00 0.00 2.97
2377 2495 9.516314 GAAAAGACAAAACAAGTTAATAGCAGT 57.484 29.630 0.00 0.00 0.00 4.40
2378 2496 9.736023 AGAAAAGACAAAACAAGTTAATAGCAG 57.264 29.630 0.00 0.00 0.00 4.24
2407 2527 2.002586 CCTGCCACTTCTTCATACACG 58.997 52.381 0.00 0.00 0.00 4.49
2457 2577 3.253432 GCTTGTTGAATCTCTTTTCCCGT 59.747 43.478 0.00 0.00 0.00 5.28
2460 2580 4.853924 TGGCTTGTTGAATCTCTTTTCC 57.146 40.909 0.00 0.00 0.00 3.13
2555 3007 5.713792 TGAAGAAACAGGTGACAAAACAA 57.286 34.783 0.00 0.00 0.00 2.83
2571 3023 9.396022 GACCATTATCCAAGTCTTAATGAAGAA 57.604 33.333 0.00 0.00 43.38 2.52
2572 3024 8.772250 AGACCATTATCCAAGTCTTAATGAAGA 58.228 33.333 7.19 0.00 36.16 2.87
2574 3026 8.772250 AGAGACCATTATCCAAGTCTTAATGAA 58.228 33.333 7.19 0.00 39.62 2.57
2577 3029 7.500559 GCAAGAGACCATTATCCAAGTCTTAAT 59.499 37.037 0.00 0.00 39.62 1.40
2580 3032 5.045286 AGCAAGAGACCATTATCCAAGTCTT 60.045 40.000 0.00 0.00 39.62 3.01
2581 3033 4.472833 AGCAAGAGACCATTATCCAAGTCT 59.527 41.667 0.00 0.00 42.15 3.24
2582 3034 4.775236 AGCAAGAGACCATTATCCAAGTC 58.225 43.478 0.00 0.00 0.00 3.01
2583 3035 4.472833 AGAGCAAGAGACCATTATCCAAGT 59.527 41.667 0.00 0.00 0.00 3.16
2584 3036 4.815308 CAGAGCAAGAGACCATTATCCAAG 59.185 45.833 0.00 0.00 0.00 3.61
2585 3037 4.774124 CAGAGCAAGAGACCATTATCCAA 58.226 43.478 0.00 0.00 0.00 3.53
2586 3038 3.432749 GCAGAGCAAGAGACCATTATCCA 60.433 47.826 0.00 0.00 0.00 3.41
2587 3039 3.137533 GCAGAGCAAGAGACCATTATCC 58.862 50.000 0.00 0.00 0.00 2.59
2588 3040 3.137533 GGCAGAGCAAGAGACCATTATC 58.862 50.000 0.00 0.00 0.00 1.75
2589 3041 2.776536 AGGCAGAGCAAGAGACCATTAT 59.223 45.455 0.00 0.00 0.00 1.28
2590 3042 2.093288 CAGGCAGAGCAAGAGACCATTA 60.093 50.000 0.00 0.00 0.00 1.90
2591 3043 0.990374 AGGCAGAGCAAGAGACCATT 59.010 50.000 0.00 0.00 0.00 3.16
2592 3044 0.252479 CAGGCAGAGCAAGAGACCAT 59.748 55.000 0.00 0.00 0.00 3.55
2593 3045 1.123861 ACAGGCAGAGCAAGAGACCA 61.124 55.000 0.00 0.00 0.00 4.02
2594 3046 0.898320 TACAGGCAGAGCAAGAGACC 59.102 55.000 0.00 0.00 0.00 3.85
2595 3047 1.738700 GCTACAGGCAGAGCAAGAGAC 60.739 57.143 1.01 0.00 41.35 3.36
2596 3048 0.534412 GCTACAGGCAGAGCAAGAGA 59.466 55.000 1.01 0.00 41.35 3.10
2597 3049 0.536260 AGCTACAGGCAGAGCAAGAG 59.464 55.000 7.84 0.00 44.79 2.85
2598 3050 0.979665 AAGCTACAGGCAGAGCAAGA 59.020 50.000 7.84 0.00 44.79 3.02
2599 3051 1.467734 CAAAGCTACAGGCAGAGCAAG 59.532 52.381 7.84 0.00 44.79 4.01
2631 3083 7.455008 CACCTAGGGGAACATACTATAACAGAT 59.545 40.741 14.81 0.00 36.25 2.90
2636 3088 8.396619 AAAACACCTAGGGGAACATACTATAA 57.603 34.615 20.81 0.00 36.25 0.98
2639 3091 5.786457 TGAAAACACCTAGGGGAACATACTA 59.214 40.000 20.81 0.00 36.25 1.82
2646 3098 5.311121 TCTTATGTGAAAACACCTAGGGGAA 59.689 40.000 20.81 0.00 36.25 3.97
2649 3101 5.123979 GCTTCTTATGTGAAAACACCTAGGG 59.876 44.000 14.81 4.64 0.00 3.53
2677 3129 9.793252 GCATCAATTCATCAAGTAATAAACTGT 57.207 29.630 0.00 0.00 38.88 3.55
2678 3130 9.241317 GGCATCAATTCATCAAGTAATAAACTG 57.759 33.333 0.00 0.00 38.88 3.16
2679 3131 8.131100 CGGCATCAATTCATCAAGTAATAAACT 58.869 33.333 0.00 0.00 41.49 2.66
2680 3132 8.128582 TCGGCATCAATTCATCAAGTAATAAAC 58.871 33.333 0.00 0.00 0.00 2.01
2681 3133 8.219546 TCGGCATCAATTCATCAAGTAATAAA 57.780 30.769 0.00 0.00 0.00 1.40
2716 3168 7.885399 ACTAAATCATTTGCTTACTCAGGAAGT 59.115 33.333 0.00 0.00 42.33 3.01
2734 3186 9.447279 TCTATTGGGAAGATCCTAACTAAATCA 57.553 33.333 0.00 0.00 39.90 2.57
2738 3190 8.714906 CCTTTCTATTGGGAAGATCCTAACTAA 58.285 37.037 0.00 0.00 39.90 2.24
2744 3196 5.674035 ACATCCTTTCTATTGGGAAGATCCT 59.326 40.000 0.00 0.00 36.57 3.24
2748 3200 7.265599 TGTAACATCCTTTCTATTGGGAAGA 57.734 36.000 0.00 0.00 32.53 2.87
2756 3208 8.906867 CAATGACCAATGTAACATCCTTTCTAT 58.093 33.333 0.00 0.00 0.00 1.98
2764 3216 4.158394 AGTGCCAATGACCAATGTAACATC 59.842 41.667 0.00 0.00 0.00 3.06
2778 3230 5.494724 AGACTGCCATATATAGTGCCAATG 58.505 41.667 4.37 0.00 0.00 2.82
2779 3231 5.768980 AGACTGCCATATATAGTGCCAAT 57.231 39.130 4.37 0.00 0.00 3.16
2781 3233 4.347876 ACAAGACTGCCATATATAGTGCCA 59.652 41.667 4.37 0.00 0.00 4.92
2782 3234 4.899502 ACAAGACTGCCATATATAGTGCC 58.100 43.478 4.37 0.00 0.00 5.01
2784 3236 9.310716 CATCATACAAGACTGCCATATATAGTG 57.689 37.037 0.00 0.00 0.00 2.74
2785 3237 9.259832 TCATCATACAAGACTGCCATATATAGT 57.740 33.333 0.00 0.00 0.00 2.12
2817 3269 6.778834 ATGTGCATACCTTGAAATTCATCA 57.221 33.333 0.00 0.00 0.00 3.07
2831 3283 9.878599 GTTTGGAACTACATATTATGTGCATAC 57.121 33.333 17.68 6.29 44.60 2.39
2840 3292 9.841295 GGTAATCTGGTTTGGAACTACATATTA 57.159 33.333 0.00 0.00 0.00 0.98
2842 3294 7.867921 TGGTAATCTGGTTTGGAACTACATAT 58.132 34.615 0.00 0.00 0.00 1.78
2845 3297 5.570205 TGGTAATCTGGTTTGGAACTACA 57.430 39.130 0.00 0.00 0.00 2.74
2870 3337 4.523083 AGATTAACATGGCATTGTACCGT 58.477 39.130 0.00 0.00 0.00 4.83
2873 3340 6.449635 TCCAAGATTAACATGGCATTGTAC 57.550 37.500 0.00 0.00 37.29 2.90
2891 3358 2.673523 CCTGGCCAGACCTCCAAG 59.326 66.667 34.91 10.80 40.22 3.61
2910 3377 5.490139 ACAATGTTCTGTGAACTTCTGTG 57.510 39.130 11.06 4.31 0.00 3.66
2929 3396 3.506398 TGGGTCAGTACAGATCTCACAA 58.494 45.455 0.00 0.00 0.00 3.33
2946 3413 6.926630 TTGATTTTTATAGCAACCTTGGGT 57.073 33.333 0.00 0.00 37.65 4.51
2962 3429 9.947433 TGCAAGATTTCTGGATTATTTGATTTT 57.053 25.926 0.00 0.00 0.00 1.82
2965 3432 8.529424 TCTGCAAGATTTCTGGATTATTTGAT 57.471 30.769 0.00 0.00 38.67 2.57
2966 3433 7.943079 TCTGCAAGATTTCTGGATTATTTGA 57.057 32.000 0.00 0.00 38.67 2.69
2967 3434 8.991243 TTTCTGCAAGATTTCTGGATTATTTG 57.009 30.769 0.00 0.00 46.36 2.32
2974 3441 3.424703 CCCTTTCTGCAAGATTTCTGGA 58.575 45.455 0.00 0.00 46.36 3.86
2976 3443 2.094338 GGCCCTTTCTGCAAGATTTCTG 60.094 50.000 0.00 0.00 46.36 3.02
3011 3478 3.988976 ACCATCATGTCAGTAAGCACT 57.011 42.857 0.00 0.00 34.42 4.40
3022 3489 6.015434 GGACTCAAAAACCTTAACCATCATGT 60.015 38.462 0.00 0.00 0.00 3.21
3036 3503 4.983671 AACACTTGGAGGACTCAAAAAC 57.016 40.909 1.32 0.00 0.00 2.43
3044 3511 7.337942 AGAAATCATATCAAACACTTGGAGGAC 59.662 37.037 0.00 0.00 33.01 3.85
3045 3512 7.337689 CAGAAATCATATCAAACACTTGGAGGA 59.662 37.037 0.00 0.00 33.01 3.71
3046 3513 7.415989 CCAGAAATCATATCAAACACTTGGAGG 60.416 40.741 0.00 0.00 33.01 4.30
3047 3514 7.478322 CCAGAAATCATATCAAACACTTGGAG 58.522 38.462 0.00 0.00 33.01 3.86
3048 3515 6.127647 GCCAGAAATCATATCAAACACTTGGA 60.128 38.462 0.00 0.00 33.01 3.53
3072 3723 4.385146 GTGACTTTCTAGTACGAAACCAGC 59.615 45.833 0.00 0.00 33.84 4.85
3081 3732 8.675504 TGCAGATAGTTAGTGACTTTCTAGTAC 58.324 37.037 7.54 0.00 42.49 2.73
3086 3737 5.047021 TGCTGCAGATAGTTAGTGACTTTCT 60.047 40.000 20.43 2.72 44.37 2.52
3088 3739 5.152623 TGCTGCAGATAGTTAGTGACTTT 57.847 39.130 20.43 0.00 39.86 2.66
3089 3740 4.382470 CCTGCTGCAGATAGTTAGTGACTT 60.382 45.833 30.10 0.00 35.15 3.01
3098 3749 2.202987 GCGCCTGCTGCAGATAGT 60.203 61.111 30.10 0.00 41.33 2.12
3099 3750 2.202974 TGCGCCTGCTGCAGATAG 60.203 61.111 30.10 19.94 43.34 2.08
3106 3757 2.357881 TCAGAACTGCGCCTGCTG 60.358 61.111 4.18 4.13 44.78 4.41
3109 3760 1.703438 GCATCTCAGAACTGCGCCTG 61.703 60.000 4.18 4.78 0.00 4.85
3111 3762 3.096791 GCATCTCAGAACTGCGCC 58.903 61.111 4.18 0.00 0.00 6.53
3141 3792 8.642908 AATAAATTCTGAATGCATCATGTGTG 57.357 30.769 0.00 0.00 37.44 3.82
3142 3793 9.661563 AAAATAAATTCTGAATGCATCATGTGT 57.338 25.926 0.00 0.00 37.44 3.72
3144 3795 9.321562 GGAAAATAAATTCTGAATGCATCATGT 57.678 29.630 0.00 0.00 37.44 3.21
3146 3797 9.542462 CAGGAAAATAAATTCTGAATGCATCAT 57.458 29.630 0.00 0.00 37.44 2.45
3148 3799 9.245962 CTCAGGAAAATAAATTCTGAATGCATC 57.754 33.333 0.00 0.00 0.00 3.91
3175 3826 0.167908 TGCCAAAGATAAACGCGCAG 59.832 50.000 5.73 2.42 0.00 5.18
3178 3829 0.802494 AGGTGCCAAAGATAAACGCG 59.198 50.000 3.53 3.53 0.00 6.01
3184 3835 6.740944 TTGTATAGCTAGGTGCCAAAGATA 57.259 37.500 4.27 0.00 44.23 1.98
3187 3838 5.163652 GGTTTTGTATAGCTAGGTGCCAAAG 60.164 44.000 4.27 0.00 44.23 2.77
3196 3847 7.152645 ACACGATATGGGTTTTGTATAGCTAG 58.847 38.462 0.00 0.00 0.00 3.42
3199 3850 6.259167 TGAACACGATATGGGTTTTGTATAGC 59.741 38.462 0.00 0.00 0.00 2.97
3200 3851 7.494625 ACTGAACACGATATGGGTTTTGTATAG 59.505 37.037 0.00 0.00 0.00 1.31
3202 3853 6.177610 ACTGAACACGATATGGGTTTTGTAT 58.822 36.000 0.00 0.00 0.00 2.29
3203 3854 5.553123 ACTGAACACGATATGGGTTTTGTA 58.447 37.500 0.00 0.00 0.00 2.41
3205 3856 5.049060 TCAACTGAACACGATATGGGTTTTG 60.049 40.000 0.00 0.00 0.00 2.44
3207 3858 4.647611 TCAACTGAACACGATATGGGTTT 58.352 39.130 0.00 0.00 0.00 3.27
3208 3859 4.020573 TCTCAACTGAACACGATATGGGTT 60.021 41.667 0.00 0.00 0.00 4.11
3209 3860 3.513912 TCTCAACTGAACACGATATGGGT 59.486 43.478 0.00 0.00 0.00 4.51
3210 3861 4.123497 TCTCAACTGAACACGATATGGG 57.877 45.455 0.00 0.00 0.00 4.00
3211 3862 5.171476 ACTTCTCAACTGAACACGATATGG 58.829 41.667 0.00 0.00 0.00 2.74
3212 3863 6.096036 AGACTTCTCAACTGAACACGATATG 58.904 40.000 0.00 0.00 0.00 1.78
3217 3868 7.869016 TTAATAGACTTCTCAACTGAACACG 57.131 36.000 0.00 0.00 0.00 4.49
3219 3870 7.877612 TGCATTAATAGACTTCTCAACTGAACA 59.122 33.333 0.00 0.00 0.00 3.18
3265 3916 9.736023 CCACAATCCAAATATAGCTTTACTTTC 57.264 33.333 0.00 0.00 0.00 2.62
3266 3917 9.474313 TCCACAATCCAAATATAGCTTTACTTT 57.526 29.630 0.00 0.00 0.00 2.66
3267 3918 9.646522 ATCCACAATCCAAATATAGCTTTACTT 57.353 29.630 0.00 0.00 0.00 2.24
3268 3919 9.071276 CATCCACAATCCAAATATAGCTTTACT 57.929 33.333 0.00 0.00 0.00 2.24
3269 3920 8.850156 ACATCCACAATCCAAATATAGCTTTAC 58.150 33.333 0.00 0.00 0.00 2.01
3270 3921 8.995027 ACATCCACAATCCAAATATAGCTTTA 57.005 30.769 0.00 0.00 0.00 1.85
3271 3922 7.781693 AGACATCCACAATCCAAATATAGCTTT 59.218 33.333 0.00 0.00 0.00 3.51
3272 3923 7.293073 AGACATCCACAATCCAAATATAGCTT 58.707 34.615 0.00 0.00 0.00 3.74
3273 3924 6.845908 AGACATCCACAATCCAAATATAGCT 58.154 36.000 0.00 0.00 0.00 3.32
3274 3925 8.621532 TTAGACATCCACAATCCAAATATAGC 57.378 34.615 0.00 0.00 0.00 2.97
3279 3930 9.125026 GAGTAATTAGACATCCACAATCCAAAT 57.875 33.333 0.00 0.00 0.00 2.32
3280 3931 7.556275 GGAGTAATTAGACATCCACAATCCAAA 59.444 37.037 0.00 0.00 0.00 3.28
3281 3932 7.054124 GGAGTAATTAGACATCCACAATCCAA 58.946 38.462 0.00 0.00 0.00 3.53
3282 3933 6.409234 GGGAGTAATTAGACATCCACAATCCA 60.409 42.308 7.76 0.00 0.00 3.41
3283 3934 5.998363 GGGAGTAATTAGACATCCACAATCC 59.002 44.000 7.76 0.00 0.00 3.01
3284 3935 6.591935 TGGGAGTAATTAGACATCCACAATC 58.408 40.000 7.76 0.00 0.00 2.67
3285 3936 6.575244 TGGGAGTAATTAGACATCCACAAT 57.425 37.500 7.76 0.00 0.00 2.71
3286 3937 6.575244 ATGGGAGTAATTAGACATCCACAA 57.425 37.500 7.76 0.00 0.00 3.33
3289 3940 6.575244 ACAATGGGAGTAATTAGACATCCA 57.425 37.500 7.76 0.00 0.00 3.41
3301 3952 6.214615 TGAGGAAGACATTTACAATGGGAGTA 59.785 38.462 1.72 0.00 0.00 2.59
3302 3953 5.014123 TGAGGAAGACATTTACAATGGGAGT 59.986 40.000 1.72 0.00 0.00 3.85
3307 3958 7.052873 AGATCCTGAGGAAGACATTTACAATG 58.947 38.462 4.76 0.00 34.34 2.82
3308 3959 7.205515 AGATCCTGAGGAAGACATTTACAAT 57.794 36.000 4.76 0.00 34.34 2.71
3400 4051 4.284490 AGGACAGAAGAGTTGCTAATGTGA 59.716 41.667 0.00 0.00 0.00 3.58
3401 4052 4.391216 CAGGACAGAAGAGTTGCTAATGTG 59.609 45.833 0.00 0.00 0.00 3.21
3402 4053 4.564406 CCAGGACAGAAGAGTTGCTAATGT 60.564 45.833 0.00 0.00 0.00 2.71
3403 4054 3.937706 CCAGGACAGAAGAGTTGCTAATG 59.062 47.826 0.00 0.00 0.00 1.90
3404 4055 3.584848 ACCAGGACAGAAGAGTTGCTAAT 59.415 43.478 0.00 0.00 0.00 1.73
3405 4056 2.972713 ACCAGGACAGAAGAGTTGCTAA 59.027 45.455 0.00 0.00 0.00 3.09
3406 4057 2.300152 CACCAGGACAGAAGAGTTGCTA 59.700 50.000 0.00 0.00 0.00 3.49
3407 4058 1.071385 CACCAGGACAGAAGAGTTGCT 59.929 52.381 0.00 0.00 0.00 3.91
3448 4099 5.236478 GCTGTTTACAGTCTTCAGCTTACAA 59.764 40.000 11.23 0.00 45.14 2.41
3485 4136 1.376812 CCCTGGTCCTGCGTTAACC 60.377 63.158 0.00 0.00 0.00 2.85
3486 4137 0.252197 ATCCCTGGTCCTGCGTTAAC 59.748 55.000 0.00 0.00 0.00 2.01
3540 4191 1.277557 ACGCTCTTTCTCCAAGCATCT 59.722 47.619 0.00 0.00 35.76 2.90
3548 4199 0.318784 ACACGTGACGCTCTTTCTCC 60.319 55.000 25.01 0.00 0.00 3.71
3556 4207 2.202311 CGATCGACACGTGACGCT 60.202 61.111 30.50 23.66 33.55 5.07
3562 4213 1.659335 AACGCAACGATCGACACGT 60.659 52.632 24.34 22.61 45.89 4.49
3563 4214 1.225104 CAACGCAACGATCGACACG 60.225 57.895 24.34 21.97 0.00 4.49
3567 4218 1.372375 TCAGCAACGCAACGATCGA 60.372 52.632 24.34 0.00 0.00 3.59
3653 4304 0.461693 GAGATCCACAGTGGCTGAGC 60.462 60.000 15.64 0.00 37.47 4.26
3654 4305 1.134759 CAGAGATCCACAGTGGCTGAG 60.135 57.143 15.64 0.00 37.47 3.35
3655 4306 0.900421 CAGAGATCCACAGTGGCTGA 59.100 55.000 15.64 0.00 37.47 4.26
3676 4327 8.378565 AGATCCAAAAACAAGAATCTAGAGTCA 58.621 33.333 21.33 0.00 0.00 3.41
3708 4359 2.180769 CCACGCGTGCTACAGCTA 59.819 61.111 33.17 0.00 42.66 3.32
3709 4360 4.742201 CCCACGCGTGCTACAGCT 62.742 66.667 33.17 0.00 42.66 4.24
3710 4361 4.735132 TCCCACGCGTGCTACAGC 62.735 66.667 33.17 0.00 42.50 4.40
3711 4362 2.284798 ATCTCCCACGCGTGCTACAG 62.285 60.000 33.17 22.57 0.00 2.74
3712 4363 2.279502 GATCTCCCACGCGTGCTACA 62.280 60.000 33.17 16.78 0.00 2.74
3713 4364 1.589196 GATCTCCCACGCGTGCTAC 60.589 63.158 33.17 15.79 0.00 3.58
3870 4521 1.086634 GCATCTCTGAAGGGACGCAC 61.087 60.000 0.00 0.00 0.00 5.34
3893 4544 6.996879 ACAGAAGAAATGTGCATCATATAGCT 59.003 34.615 0.00 0.00 35.48 3.32
3895 4546 8.374327 TGACAGAAGAAATGTGCATCATATAG 57.626 34.615 0.00 0.00 35.48 1.31
3925 4576 1.995376 AATGACCCCCTCACACAAAC 58.005 50.000 0.00 0.00 0.00 2.93
3982 4633 5.048504 TCTGCAGTTGATTTGACAGAAATCC 60.049 40.000 14.67 0.00 36.17 3.01
3989 4640 4.398988 ACAAAGTCTGCAGTTGATTTGACA 59.601 37.500 26.65 2.48 33.14 3.58
4046 4697 7.528996 TTTCAGTTGTCCATTCTTGATTGAT 57.471 32.000 0.00 0.00 0.00 2.57
4078 4729 5.385198 TCCTGAGCTGTCCACTTTTTATTT 58.615 37.500 0.00 0.00 0.00 1.40
4079 4730 4.985538 TCCTGAGCTGTCCACTTTTTATT 58.014 39.130 0.00 0.00 0.00 1.40
4080 4731 4.640771 TCCTGAGCTGTCCACTTTTTAT 57.359 40.909 0.00 0.00 0.00 1.40
4081 4732 4.431416 TTCCTGAGCTGTCCACTTTTTA 57.569 40.909 0.00 0.00 0.00 1.52
4082 4733 3.297134 TTCCTGAGCTGTCCACTTTTT 57.703 42.857 0.00 0.00 0.00 1.94
4085 4736 2.107204 ACAATTCCTGAGCTGTCCACTT 59.893 45.455 0.00 0.00 0.00 3.16
4086 4737 1.701847 ACAATTCCTGAGCTGTCCACT 59.298 47.619 0.00 0.00 0.00 4.00
4087 4738 1.808945 CACAATTCCTGAGCTGTCCAC 59.191 52.381 0.00 0.00 0.00 4.02
4088 4739 1.883638 GCACAATTCCTGAGCTGTCCA 60.884 52.381 0.00 0.00 38.48 4.02
4091 4742 1.884579 CTTGCACAATTCCTGAGCTGT 59.115 47.619 0.00 0.00 41.74 4.40
4092 4743 1.201647 CCTTGCACAATTCCTGAGCTG 59.798 52.381 0.00 0.00 41.74 4.24
4093 4744 1.542492 CCTTGCACAATTCCTGAGCT 58.458 50.000 0.00 0.00 41.74 4.09
4094 4745 0.529378 CCCTTGCACAATTCCTGAGC 59.471 55.000 0.00 0.00 41.58 4.26
4095 4746 1.815003 GTCCCTTGCACAATTCCTGAG 59.185 52.381 0.00 0.00 0.00 3.35
4096 4747 1.881925 CGTCCCTTGCACAATTCCTGA 60.882 52.381 0.00 0.00 0.00 3.86
4097 4748 0.523072 CGTCCCTTGCACAATTCCTG 59.477 55.000 0.00 0.00 0.00 3.86
4098 4749 0.609131 CCGTCCCTTGCACAATTCCT 60.609 55.000 0.00 0.00 0.00 3.36
4099 4750 0.608035 TCCGTCCCTTGCACAATTCC 60.608 55.000 0.00 0.00 0.00 3.01
4100 4751 1.463674 ATCCGTCCCTTGCACAATTC 58.536 50.000 0.00 0.00 0.00 2.17
4101 4752 2.752903 GTTATCCGTCCCTTGCACAATT 59.247 45.455 0.00 0.00 0.00 2.32
4124 4775 4.177537 TGAGGATGAAAGGTGGACAAAA 57.822 40.909 0.00 0.00 0.00 2.44
4151 4802 1.144298 ACCCTTACCGGTTGCTCTTTT 59.856 47.619 15.04 0.00 29.19 2.27
4152 4803 0.769247 ACCCTTACCGGTTGCTCTTT 59.231 50.000 15.04 0.00 29.19 2.52
4153 4804 0.036306 CACCCTTACCGGTTGCTCTT 59.964 55.000 15.04 0.00 32.17 2.85
4154 4805 1.125711 ACACCCTTACCGGTTGCTCT 61.126 55.000 15.04 0.00 32.17 4.09
4155 4806 0.953960 CACACCCTTACCGGTTGCTC 60.954 60.000 15.04 0.00 32.17 4.26
4156 4807 1.072505 CACACCCTTACCGGTTGCT 59.927 57.895 15.04 0.00 32.17 3.91
4157 4808 1.969589 CCACACCCTTACCGGTTGC 60.970 63.158 15.04 0.00 32.17 4.17
4158 4809 0.887387 CACCACACCCTTACCGGTTG 60.887 60.000 15.04 7.13 32.17 3.77
4159 4810 1.452801 CACCACACCCTTACCGGTT 59.547 57.895 15.04 0.00 32.17 4.44
4160 4811 3.153825 CACCACACCCTTACCGGT 58.846 61.111 13.98 13.98 36.18 5.28
4161 4812 2.359478 GCACCACACCCTTACCGG 60.359 66.667 0.00 0.00 0.00 5.28
4162 4813 2.359478 GGCACCACACCCTTACCG 60.359 66.667 0.00 0.00 0.00 4.02
4163 4814 0.965363 CATGGCACCACACCCTTACC 60.965 60.000 0.00 0.00 0.00 2.85
4164 4815 0.251165 ACATGGCACCACACCCTTAC 60.251 55.000 0.00 0.00 0.00 2.34
4165 4816 1.003812 GTACATGGCACCACACCCTTA 59.996 52.381 0.00 0.00 0.00 2.69
4166 4817 0.251165 GTACATGGCACCACACCCTT 60.251 55.000 0.00 0.00 0.00 3.95
4167 4818 1.133809 AGTACATGGCACCACACCCT 61.134 55.000 0.00 0.00 0.00 4.34
4168 4819 0.616371 TAGTACATGGCACCACACCC 59.384 55.000 0.00 0.00 0.00 4.61
4169 4820 2.483014 TTAGTACATGGCACCACACC 57.517 50.000 0.00 0.00 0.00 4.16
4170 4821 4.515191 CCATATTAGTACATGGCACCACAC 59.485 45.833 0.00 0.00 35.60 3.82
4171 4822 4.445592 CCCATATTAGTACATGGCACCACA 60.446 45.833 0.00 0.00 40.41 4.17
4172 4823 4.072131 CCCATATTAGTACATGGCACCAC 58.928 47.826 0.00 0.00 40.41 4.16
4173 4824 3.719479 ACCCATATTAGTACATGGCACCA 59.281 43.478 0.00 0.00 40.41 4.17
4174 4825 4.367039 ACCCATATTAGTACATGGCACC 57.633 45.455 0.00 0.00 40.41 5.01
4175 4826 6.531021 ACTTACCCATATTAGTACATGGCAC 58.469 40.000 0.00 0.00 40.41 5.01
4176 4827 6.757173 ACTTACCCATATTAGTACATGGCA 57.243 37.500 0.00 0.00 40.41 4.92
4177 4828 7.717875 TGAAACTTACCCATATTAGTACATGGC 59.282 37.037 0.00 0.00 40.41 4.40
4178 4829 9.621629 TTGAAACTTACCCATATTAGTACATGG 57.378 33.333 0.00 3.46 41.25 3.66
4226 4877 3.313249 CGGTCGATAAAAATGGGGTTACC 59.687 47.826 0.00 0.00 40.81 2.85
4227 4878 4.190772 TCGGTCGATAAAAATGGGGTTAC 58.809 43.478 0.00 0.00 0.00 2.50
4228 4879 4.484537 TCGGTCGATAAAAATGGGGTTA 57.515 40.909 0.00 0.00 0.00 2.85
4229 4880 3.353370 TCGGTCGATAAAAATGGGGTT 57.647 42.857 0.00 0.00 0.00 4.11
4230 4881 3.211045 CATCGGTCGATAAAAATGGGGT 58.789 45.455 5.50 0.00 32.93 4.95
4231 4882 3.003275 CACATCGGTCGATAAAAATGGGG 59.997 47.826 5.50 0.00 32.93 4.96
4232 4883 3.874543 TCACATCGGTCGATAAAAATGGG 59.125 43.478 5.50 0.00 32.93 4.00
4233 4884 5.443261 CATCACATCGGTCGATAAAAATGG 58.557 41.667 5.50 0.00 32.93 3.16
4234 4885 5.007626 ACCATCACATCGGTCGATAAAAATG 59.992 40.000 5.50 7.56 32.93 2.32
4235 4886 5.123227 ACCATCACATCGGTCGATAAAAAT 58.877 37.500 5.50 0.00 32.93 1.82
4236 4887 4.509616 ACCATCACATCGGTCGATAAAAA 58.490 39.130 5.50 0.00 32.93 1.94
4237 4888 4.131649 ACCATCACATCGGTCGATAAAA 57.868 40.909 5.50 0.00 32.93 1.52
4238 4889 3.812156 ACCATCACATCGGTCGATAAA 57.188 42.857 5.50 0.00 32.93 1.40
4239 4890 5.227152 CAATACCATCACATCGGTCGATAA 58.773 41.667 5.50 0.00 36.69 1.75
4240 4891 4.321675 CCAATACCATCACATCGGTCGATA 60.322 45.833 5.50 0.00 36.69 2.92
4241 4892 3.554960 CCAATACCATCACATCGGTCGAT 60.555 47.826 0.00 0.00 36.69 3.59
4242 4893 2.223947 CCAATACCATCACATCGGTCGA 60.224 50.000 0.00 0.00 36.69 4.20
4243 4894 2.135139 CCAATACCATCACATCGGTCG 58.865 52.381 0.00 0.00 36.69 4.79
4244 4895 2.494059 CCCAATACCATCACATCGGTC 58.506 52.381 0.00 0.00 36.69 4.79
4245 4896 1.142870 CCCCAATACCATCACATCGGT 59.857 52.381 0.00 0.00 39.41 4.69
4246 4897 1.419762 TCCCCAATACCATCACATCGG 59.580 52.381 0.00 0.00 0.00 4.18
4247 4898 2.494059 GTCCCCAATACCATCACATCG 58.506 52.381 0.00 0.00 0.00 3.84
4248 4899 2.104111 TCGTCCCCAATACCATCACATC 59.896 50.000 0.00 0.00 0.00 3.06
4249 4900 2.123589 TCGTCCCCAATACCATCACAT 58.876 47.619 0.00 0.00 0.00 3.21
4250 4901 1.574263 TCGTCCCCAATACCATCACA 58.426 50.000 0.00 0.00 0.00 3.58
4251 4902 2.930826 ATCGTCCCCAATACCATCAC 57.069 50.000 0.00 0.00 0.00 3.06
4252 4903 3.583228 ACTATCGTCCCCAATACCATCA 58.417 45.455 0.00 0.00 0.00 3.07
4253 4904 5.934402 ATACTATCGTCCCCAATACCATC 57.066 43.478 0.00 0.00 0.00 3.51
4254 4905 7.801893 TTTATACTATCGTCCCCAATACCAT 57.198 36.000 0.00 0.00 0.00 3.55
4255 4906 7.801893 ATTTATACTATCGTCCCCAATACCA 57.198 36.000 0.00 0.00 0.00 3.25
4260 4911 9.938280 CTTGATTATTTATACTATCGTCCCCAA 57.062 33.333 0.00 0.00 0.00 4.12
4261 4912 9.096823 ACTTGATTATTTATACTATCGTCCCCA 57.903 33.333 0.00 0.00 0.00 4.96
4262 4913 9.583765 GACTTGATTATTTATACTATCGTCCCC 57.416 37.037 0.00 0.00 0.00 4.81
4263 4914 9.583765 GGACTTGATTATTTATACTATCGTCCC 57.416 37.037 0.00 0.00 29.01 4.46
4288 4939 6.603201 AGACACTCACCCAAATATAACATTGG 59.397 38.462 7.86 7.86 44.61 3.16
4289 4940 7.336679 TCAGACACTCACCCAAATATAACATTG 59.663 37.037 0.00 0.00 0.00 2.82
4290 4941 7.402054 TCAGACACTCACCCAAATATAACATT 58.598 34.615 0.00 0.00 0.00 2.71
4291 4942 6.957631 TCAGACACTCACCCAAATATAACAT 58.042 36.000 0.00 0.00 0.00 2.71
4292 4943 6.013725 ACTCAGACACTCACCCAAATATAACA 60.014 38.462 0.00 0.00 0.00 2.41
4293 4944 6.313905 CACTCAGACACTCACCCAAATATAAC 59.686 42.308 0.00 0.00 0.00 1.89
4294 4945 6.013725 ACACTCAGACACTCACCCAAATATAA 60.014 38.462 0.00 0.00 0.00 0.98
4295 4946 5.483937 ACACTCAGACACTCACCCAAATATA 59.516 40.000 0.00 0.00 0.00 0.86
4296 4947 4.287067 ACACTCAGACACTCACCCAAATAT 59.713 41.667 0.00 0.00 0.00 1.28
4297 4948 3.646162 ACACTCAGACACTCACCCAAATA 59.354 43.478 0.00 0.00 0.00 1.40
4298 4949 2.439507 ACACTCAGACACTCACCCAAAT 59.560 45.455 0.00 0.00 0.00 2.32
4299 4950 1.837439 ACACTCAGACACTCACCCAAA 59.163 47.619 0.00 0.00 0.00 3.28
4300 4951 1.496060 ACACTCAGACACTCACCCAA 58.504 50.000 0.00 0.00 0.00 4.12
4301 4952 2.375014 TACACTCAGACACTCACCCA 57.625 50.000 0.00 0.00 0.00 4.51
4302 4953 2.093973 CCATACACTCAGACACTCACCC 60.094 54.545 0.00 0.00 0.00 4.61
4303 4954 2.563179 ACCATACACTCAGACACTCACC 59.437 50.000 0.00 0.00 0.00 4.02
4304 4955 3.944055 ACCATACACTCAGACACTCAC 57.056 47.619 0.00 0.00 0.00 3.51
4305 4956 6.605471 ATTAACCATACACTCAGACACTCA 57.395 37.500 0.00 0.00 0.00 3.41
4320 4971 8.856103 GCCACCAACACTATTATTATTAACCAT 58.144 33.333 0.00 0.00 0.00 3.55
4321 4972 8.056400 AGCCACCAACACTATTATTATTAACCA 58.944 33.333 0.00 0.00 0.00 3.67
4322 4973 8.459911 AGCCACCAACACTATTATTATTAACC 57.540 34.615 0.00 0.00 0.00 2.85
4329 4980 9.066892 CATGTTATAGCCACCAACACTATTATT 57.933 33.333 0.00 0.00 35.17 1.40
4330 4981 8.217799 ACATGTTATAGCCACCAACACTATTAT 58.782 33.333 0.00 0.00 35.17 1.28
4331 4982 7.570132 ACATGTTATAGCCACCAACACTATTA 58.430 34.615 0.00 0.00 35.17 0.98
4332 4983 6.423182 ACATGTTATAGCCACCAACACTATT 58.577 36.000 0.00 0.00 35.17 1.73
4333 4984 6.001449 ACATGTTATAGCCACCAACACTAT 57.999 37.500 0.00 0.00 35.17 2.12
4334 4985 5.429681 ACATGTTATAGCCACCAACACTA 57.570 39.130 0.00 0.00 35.17 2.74
4335 4986 4.301072 ACATGTTATAGCCACCAACACT 57.699 40.909 0.00 0.00 35.17 3.55
4336 4987 6.072397 TGTTAACATGTTATAGCCACCAACAC 60.072 38.462 18.69 9.78 35.17 3.32
4337 4988 6.004574 TGTTAACATGTTATAGCCACCAACA 58.995 36.000 18.69 14.71 36.66 3.33
4338 4989 6.503589 TGTTAACATGTTATAGCCACCAAC 57.496 37.500 18.69 12.47 0.00 3.77
4339 4990 7.094508 CATGTTAACATGTTATAGCCACCAA 57.905 36.000 31.75 0.00 46.40 3.67
4340 4991 6.691754 CATGTTAACATGTTATAGCCACCA 57.308 37.500 31.75 7.83 46.40 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.