Multiple sequence alignment - TraesCS2A01G076900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G076900 chr2A 100.000 4733 0 0 1 4733 34521662 34516930 0.000000e+00 8741.0
1 TraesCS2A01G076900 chr2D 90.277 1697 102 36 2679 4364 32295123 32293479 0.000000e+00 2161.0
2 TraesCS2A01G076900 chr2D 90.769 910 53 13 903 1795 32297094 32296199 0.000000e+00 1186.0
3 TraesCS2A01G076900 chr2D 86.829 410 37 11 2037 2443 32295805 32295410 4.350000e-120 442.0
4 TraesCS2A01G076900 chr2D 96.327 245 9 0 4489 4733 32292716 32292472 2.050000e-108 403.0
5 TraesCS2A01G076900 chr2D 88.017 242 12 8 2449 2673 32295434 32295193 2.170000e-68 270.0
6 TraesCS2A01G076900 chr2B 90.129 1550 118 23 3145 4685 52912396 52910873 0.000000e+00 1982.0
7 TraesCS2A01G076900 chr2B 89.709 1545 101 24 222 1745 52915983 52914476 0.000000e+00 1919.0
8 TraesCS2A01G076900 chr2B 92.561 699 30 12 1109 1795 720911226 720910538 0.000000e+00 983.0
9 TraesCS2A01G076900 chr2B 89.537 669 46 14 1779 2443 52914175 52913527 0.000000e+00 826.0
10 TraesCS2A01G076900 chr2B 92.754 552 29 9 1779 2327 720910505 720909962 0.000000e+00 787.0
11 TraesCS2A01G076900 chr2B 88.889 459 32 7 2454 2893 52913545 52913087 8.950000e-152 547.0
12 TraesCS2A01G076900 chr2B 89.394 264 17 9 2890 3148 52913050 52912793 5.910000e-84 322.0
13 TraesCS2A01G076900 chr2B 91.935 124 9 1 2454 2577 720909910 720909788 6.300000e-39 172.0
14 TraesCS2A01G076900 chr2B 96.104 77 2 1 2367 2443 720909967 720909892 1.790000e-24 124.0
15 TraesCS2A01G076900 chr2B 94.737 57 1 2 1741 1795 52914264 52914208 2.350000e-13 87.9
16 TraesCS2A01G076900 chr3B 91.714 700 35 10 1109 1795 292589428 292590117 0.000000e+00 950.0
17 TraesCS2A01G076900 chr3B 92.210 552 32 9 1779 2327 292590150 292590693 0.000000e+00 771.0
18 TraesCS2A01G076900 chr3B 91.129 124 10 1 2454 2577 292590745 292590867 2.930000e-37 167.0
19 TraesCS2A01G076900 chr3B 96.104 77 2 1 2367 2443 292590688 292590763 1.790000e-24 124.0
20 TraesCS2A01G076900 chr5B 91.323 703 37 14 1107 1795 285012089 285011397 0.000000e+00 939.0
21 TraesCS2A01G076900 chr5B 92.754 552 29 9 1779 2327 285011364 285010821 0.000000e+00 787.0
22 TraesCS2A01G076900 chr5B 90.323 124 11 1 2454 2577 285010769 285010647 1.360000e-35 161.0
23 TraesCS2A01G076900 chr5B 96.104 77 2 1 2367 2443 285010826 285010751 1.790000e-24 124.0
24 TraesCS2A01G076900 chr4A 91.155 701 41 9 1109 1795 605528627 605529320 0.000000e+00 931.0
25 TraesCS2A01G076900 chr4A 90.120 334 23 9 1779 2109 605529353 605529679 4.380000e-115 425.0
26 TraesCS2A01G076900 chr1B 87.966 698 28 15 1111 1795 358293123 358292469 0.000000e+00 773.0
27 TraesCS2A01G076900 chr1B 92.210 552 31 10 1779 2327 358292436 358291894 0.000000e+00 771.0
28 TraesCS2A01G076900 chr1B 91.935 124 9 1 2454 2577 358291842 358291720 6.300000e-39 172.0
29 TraesCS2A01G076900 chr1B 96.104 77 2 1 2367 2443 358291899 358291824 1.790000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G076900 chr2A 34516930 34521662 4732 True 8741.000000 8741 100.000000 1 4733 1 chr2A.!!$R1 4732
1 TraesCS2A01G076900 chr2D 32292472 32297094 4622 True 892.400000 2161 90.443800 903 4733 5 chr2D.!!$R1 3830
2 TraesCS2A01G076900 chr2B 52910873 52915983 5110 True 947.316667 1982 90.399167 222 4685 6 chr2B.!!$R1 4463
3 TraesCS2A01G076900 chr2B 720909788 720911226 1438 True 516.500000 983 93.338500 1109 2577 4 chr2B.!!$R2 1468
4 TraesCS2A01G076900 chr3B 292589428 292590867 1439 False 503.000000 950 92.789250 1109 2577 4 chr3B.!!$F1 1468
5 TraesCS2A01G076900 chr5B 285010647 285012089 1442 True 502.750000 939 92.626000 1107 2577 4 chr5B.!!$R1 1470
6 TraesCS2A01G076900 chr4A 605528627 605529679 1052 False 678.000000 931 90.637500 1109 2109 2 chr4A.!!$F1 1000
7 TraesCS2A01G076900 chr1B 358291720 358293123 1403 True 460.000000 773 92.053750 1111 2577 4 chr1B.!!$R1 1466

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
112 113 0.039618 GCCCAAGGTCCTTCATCCAA 59.960 55.0 0.00 0.00 0.00 3.53 F
361 363 0.106708 TCGTTGGAGCAGCAGTTTCT 59.893 50.0 0.00 0.00 0.00 2.52 F
878 880 0.178894 AGCCCTTGGGCCTGATTTTT 60.179 50.0 25.53 3.04 35.12 1.94 F
1642 1658 0.824109 TTCAGGTACTCGCCCATGAG 59.176 55.0 0.00 0.00 41.86 2.90 F
3071 3667 0.400594 ACACTAACCAGGCCCTGAAC 59.599 55.0 13.74 0.00 32.44 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1559 1573 0.969149 ACGTTGTCCAGCTGATCAGA 59.031 50.0 27.04 2.20 0.00 3.27 R
1560 1574 1.073964 CACGTTGTCCAGCTGATCAG 58.926 55.0 18.84 18.84 0.00 2.90 R
2595 3067 0.319900 TTCAAGGTCTGCAGTCGAGC 60.320 55.0 14.67 4.44 0.00 5.03 R
3555 4555 0.040067 CGTTTCAACCAAGCAGGCTC 60.040 55.0 0.00 0.00 43.14 4.70 R
4454 6130 0.035630 GACTTGCAGCCTGATGAGGT 60.036 55.0 0.00 0.00 42.15 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.816787 AGGTTTCAAACTTTAATACAATAGGGA 57.183 29.630 0.00 0.00 0.00 4.20
34 35 9.850628 GGTTTCAAACTTTAATACAATAGGGAC 57.149 33.333 0.00 0.00 0.00 4.46
35 36 9.850628 GTTTCAAACTTTAATACAATAGGGACC 57.149 33.333 0.00 0.00 0.00 4.46
36 37 9.589461 TTTCAAACTTTAATACAATAGGGACCA 57.411 29.630 0.00 0.00 0.00 4.02
37 38 9.589461 TTCAAACTTTAATACAATAGGGACCAA 57.411 29.630 0.00 0.00 0.00 3.67
38 39 9.016438 TCAAACTTTAATACAATAGGGACCAAC 57.984 33.333 0.00 0.00 0.00 3.77
39 40 9.020731 CAAACTTTAATACAATAGGGACCAACT 57.979 33.333 0.00 0.00 0.00 3.16
40 41 9.596308 AAACTTTAATACAATAGGGACCAACTT 57.404 29.630 0.00 0.00 0.00 2.66
41 42 8.575649 ACTTTAATACAATAGGGACCAACTTG 57.424 34.615 0.00 0.00 0.00 3.16
42 43 8.168058 ACTTTAATACAATAGGGACCAACTTGT 58.832 33.333 9.06 9.06 34.63 3.16
43 44 9.675464 CTTTAATACAATAGGGACCAACTTGTA 57.325 33.333 11.93 11.93 36.89 2.41
44 45 9.452287 TTTAATACAATAGGGACCAACTTGTAC 57.548 33.333 11.83 0.00 35.73 2.90
45 46 6.886178 ATACAATAGGGACCAACTTGTACT 57.114 37.500 11.83 3.23 35.73 2.73
46 47 4.906618 ACAATAGGGACCAACTTGTACTG 58.093 43.478 0.00 0.00 0.00 2.74
47 48 4.595781 ACAATAGGGACCAACTTGTACTGA 59.404 41.667 0.00 0.00 0.00 3.41
48 49 5.072600 ACAATAGGGACCAACTTGTACTGAA 59.927 40.000 0.00 0.00 0.00 3.02
49 50 6.180472 CAATAGGGACCAACTTGTACTGAAT 58.820 40.000 0.00 0.00 0.00 2.57
50 51 4.287766 AGGGACCAACTTGTACTGAATC 57.712 45.455 0.00 0.00 0.00 2.52
51 52 3.910627 AGGGACCAACTTGTACTGAATCT 59.089 43.478 0.00 0.00 0.00 2.40
52 53 4.020128 AGGGACCAACTTGTACTGAATCTC 60.020 45.833 0.00 0.00 0.00 2.75
53 54 4.262894 GGGACCAACTTGTACTGAATCTCA 60.263 45.833 0.00 0.00 0.00 3.27
54 55 4.691216 GGACCAACTTGTACTGAATCTCAC 59.309 45.833 0.00 0.00 0.00 3.51
55 56 4.642429 ACCAACTTGTACTGAATCTCACC 58.358 43.478 0.00 0.00 0.00 4.02
56 57 3.679980 CCAACTTGTACTGAATCTCACCG 59.320 47.826 0.00 0.00 0.00 4.94
57 58 4.556233 CAACTTGTACTGAATCTCACCGA 58.444 43.478 0.00 0.00 0.00 4.69
58 59 4.866508 ACTTGTACTGAATCTCACCGAA 57.133 40.909 0.00 0.00 0.00 4.30
59 60 4.810790 ACTTGTACTGAATCTCACCGAAG 58.189 43.478 0.00 0.00 0.00 3.79
75 76 3.757745 CGAAGGTTTCACACAACAAGT 57.242 42.857 0.00 0.00 0.00 3.16
76 77 4.868450 CGAAGGTTTCACACAACAAGTA 57.132 40.909 0.00 0.00 0.00 2.24
77 78 5.224562 CGAAGGTTTCACACAACAAGTAA 57.775 39.130 0.00 0.00 0.00 2.24
78 79 5.816919 CGAAGGTTTCACACAACAAGTAAT 58.183 37.500 0.00 0.00 0.00 1.89
79 80 5.681105 CGAAGGTTTCACACAACAAGTAATG 59.319 40.000 0.00 0.00 0.00 1.90
80 81 4.932146 AGGTTTCACACAACAAGTAATGC 58.068 39.130 0.00 0.00 0.00 3.56
81 82 4.644685 AGGTTTCACACAACAAGTAATGCT 59.355 37.500 0.00 0.00 0.00 3.79
82 83 4.976116 GGTTTCACACAACAAGTAATGCTC 59.024 41.667 0.00 0.00 0.00 4.26
83 84 5.221048 GGTTTCACACAACAAGTAATGCTCT 60.221 40.000 0.00 0.00 0.00 4.09
84 85 6.265577 GTTTCACACAACAAGTAATGCTCTT 58.734 36.000 0.00 0.00 0.00 2.85
85 86 6.449635 TTCACACAACAAGTAATGCTCTTT 57.550 33.333 0.00 0.00 0.00 2.52
86 87 6.449635 TCACACAACAAGTAATGCTCTTTT 57.550 33.333 0.00 0.00 0.00 2.27
87 88 6.494842 TCACACAACAAGTAATGCTCTTTTC 58.505 36.000 0.00 0.00 0.00 2.29
88 89 5.687285 CACACAACAAGTAATGCTCTTTTCC 59.313 40.000 0.00 0.00 0.00 3.13
89 90 5.594317 ACACAACAAGTAATGCTCTTTTCCT 59.406 36.000 0.00 0.00 0.00 3.36
90 91 6.770785 ACACAACAAGTAATGCTCTTTTCCTA 59.229 34.615 0.00 0.00 0.00 2.94
91 92 7.284489 ACACAACAAGTAATGCTCTTTTCCTAA 59.716 33.333 0.00 0.00 0.00 2.69
92 93 8.299570 CACAACAAGTAATGCTCTTTTCCTAAT 58.700 33.333 0.00 0.00 0.00 1.73
93 94 8.299570 ACAACAAGTAATGCTCTTTTCCTAATG 58.700 33.333 0.00 0.00 0.00 1.90
94 95 6.856895 ACAAGTAATGCTCTTTTCCTAATGC 58.143 36.000 0.00 0.00 0.00 3.56
95 96 6.127619 ACAAGTAATGCTCTTTTCCTAATGCC 60.128 38.462 0.00 0.00 0.00 4.40
96 97 4.889995 AGTAATGCTCTTTTCCTAATGCCC 59.110 41.667 0.00 0.00 0.00 5.36
97 98 2.897271 TGCTCTTTTCCTAATGCCCA 57.103 45.000 0.00 0.00 0.00 5.36
98 99 3.168035 TGCTCTTTTCCTAATGCCCAA 57.832 42.857 0.00 0.00 0.00 4.12
99 100 3.091545 TGCTCTTTTCCTAATGCCCAAG 58.908 45.455 0.00 0.00 0.00 3.61
100 101 2.428530 GCTCTTTTCCTAATGCCCAAGG 59.571 50.000 0.00 0.00 0.00 3.61
101 102 3.701664 CTCTTTTCCTAATGCCCAAGGT 58.298 45.455 0.00 0.00 34.30 3.50
102 103 3.696548 CTCTTTTCCTAATGCCCAAGGTC 59.303 47.826 0.00 0.00 34.30 3.85
103 104 2.525105 TTTCCTAATGCCCAAGGTCC 57.475 50.000 0.00 0.00 34.30 4.46
104 105 1.681229 TTCCTAATGCCCAAGGTCCT 58.319 50.000 0.00 0.00 34.30 3.85
105 106 1.681229 TCCTAATGCCCAAGGTCCTT 58.319 50.000 0.00 0.00 34.30 3.36
106 107 1.564348 TCCTAATGCCCAAGGTCCTTC 59.436 52.381 0.00 0.00 34.30 3.46
107 108 1.284785 CCTAATGCCCAAGGTCCTTCA 59.715 52.381 0.00 0.00 0.00 3.02
108 109 2.091665 CCTAATGCCCAAGGTCCTTCAT 60.092 50.000 0.00 0.00 0.00 2.57
109 110 2.149973 AATGCCCAAGGTCCTTCATC 57.850 50.000 0.00 0.00 0.00 2.92
110 111 0.259938 ATGCCCAAGGTCCTTCATCC 59.740 55.000 0.00 0.00 0.00 3.51
111 112 1.139498 TGCCCAAGGTCCTTCATCCA 61.139 55.000 0.00 0.00 0.00 3.41
112 113 0.039618 GCCCAAGGTCCTTCATCCAA 59.960 55.000 0.00 0.00 0.00 3.53
113 114 1.839424 CCCAAGGTCCTTCATCCAAC 58.161 55.000 0.00 0.00 0.00 3.77
114 115 1.075374 CCCAAGGTCCTTCATCCAACA 59.925 52.381 0.00 0.00 0.00 3.33
115 116 2.162681 CCAAGGTCCTTCATCCAACAC 58.837 52.381 0.00 0.00 0.00 3.32
116 117 2.162681 CAAGGTCCTTCATCCAACACC 58.837 52.381 0.00 0.00 0.00 4.16
117 118 1.747444 AGGTCCTTCATCCAACACCT 58.253 50.000 0.00 0.00 0.00 4.00
118 119 2.065799 AGGTCCTTCATCCAACACCTT 58.934 47.619 0.00 0.00 29.52 3.50
119 120 3.256704 AGGTCCTTCATCCAACACCTTA 58.743 45.455 0.00 0.00 29.52 2.69
120 121 3.852578 AGGTCCTTCATCCAACACCTTAT 59.147 43.478 0.00 0.00 29.52 1.73
121 122 3.947834 GGTCCTTCATCCAACACCTTATG 59.052 47.826 0.00 0.00 0.00 1.90
122 123 3.378427 GTCCTTCATCCAACACCTTATGC 59.622 47.826 0.00 0.00 0.00 3.14
123 124 3.010027 TCCTTCATCCAACACCTTATGCA 59.990 43.478 0.00 0.00 0.00 3.96
124 125 3.763360 CCTTCATCCAACACCTTATGCAA 59.237 43.478 0.00 0.00 0.00 4.08
125 126 4.380867 CCTTCATCCAACACCTTATGCAAC 60.381 45.833 0.00 0.00 0.00 4.17
126 127 3.088532 TCATCCAACACCTTATGCAACC 58.911 45.455 0.00 0.00 0.00 3.77
127 128 2.666272 TCCAACACCTTATGCAACCA 57.334 45.000 0.00 0.00 0.00 3.67
128 129 3.168035 TCCAACACCTTATGCAACCAT 57.832 42.857 0.00 0.00 35.44 3.55
129 130 3.088532 TCCAACACCTTATGCAACCATC 58.911 45.455 0.00 0.00 32.85 3.51
130 131 2.824936 CCAACACCTTATGCAACCATCA 59.175 45.455 0.00 0.00 32.85 3.07
131 132 3.448301 CCAACACCTTATGCAACCATCAT 59.552 43.478 0.00 0.00 32.85 2.45
132 133 4.426416 CAACACCTTATGCAACCATCATG 58.574 43.478 0.00 0.00 32.85 3.07
133 134 3.025978 ACACCTTATGCAACCATCATGG 58.974 45.455 0.54 0.54 45.02 3.66
134 135 2.363038 CACCTTATGCAACCATCATGGG 59.637 50.000 9.04 0.00 43.37 4.00
135 136 1.965643 CCTTATGCAACCATCATGGGG 59.034 52.381 9.04 0.38 43.37 4.96
136 137 1.342174 CTTATGCAACCATCATGGGGC 59.658 52.381 9.04 12.05 43.37 5.80
137 138 2.444238 TGCAACCATCATGGGGCA 59.556 55.556 18.53 18.53 45.39 5.36
138 139 1.983481 TGCAACCATCATGGGGCAC 60.983 57.895 18.53 1.80 43.66 5.01
152 153 3.978876 GGCACCACTAACAATCCCT 57.021 52.632 0.00 0.00 0.00 4.20
153 154 2.215942 GGCACCACTAACAATCCCTT 57.784 50.000 0.00 0.00 0.00 3.95
154 155 2.525368 GGCACCACTAACAATCCCTTT 58.475 47.619 0.00 0.00 0.00 3.11
155 156 3.692690 GGCACCACTAACAATCCCTTTA 58.307 45.455 0.00 0.00 0.00 1.85
156 157 4.278310 GGCACCACTAACAATCCCTTTAT 58.722 43.478 0.00 0.00 0.00 1.40
157 158 4.097892 GGCACCACTAACAATCCCTTTATG 59.902 45.833 0.00 0.00 0.00 1.90
158 159 4.097892 GCACCACTAACAATCCCTTTATGG 59.902 45.833 0.00 0.00 0.00 2.74
177 178 3.855159 GGCACCACACCCTACTTAG 57.145 57.895 0.00 0.00 0.00 2.18
178 179 0.392595 GGCACCACACCCTACTTAGC 60.393 60.000 0.00 0.00 0.00 3.09
179 180 0.739813 GCACCACACCCTACTTAGCG 60.740 60.000 0.00 0.00 0.00 4.26
180 181 0.739813 CACCACACCCTACTTAGCGC 60.740 60.000 0.00 0.00 0.00 5.92
181 182 1.518572 CCACACCCTACTTAGCGCG 60.519 63.158 0.00 0.00 0.00 6.86
182 183 1.214589 CACACCCTACTTAGCGCGT 59.785 57.895 8.43 0.00 0.00 6.01
183 184 0.389426 CACACCCTACTTAGCGCGTT 60.389 55.000 8.43 3.54 0.00 4.84
184 185 0.319405 ACACCCTACTTAGCGCGTTT 59.681 50.000 8.43 0.00 0.00 3.60
185 186 1.545582 ACACCCTACTTAGCGCGTTTA 59.454 47.619 8.43 0.00 0.00 2.01
186 187 1.922545 CACCCTACTTAGCGCGTTTAC 59.077 52.381 8.43 0.00 0.00 2.01
187 188 1.821136 ACCCTACTTAGCGCGTTTACT 59.179 47.619 8.43 0.00 0.00 2.24
188 189 2.190981 CCCTACTTAGCGCGTTTACTG 58.809 52.381 8.43 0.00 0.00 2.74
189 190 2.159338 CCCTACTTAGCGCGTTTACTGA 60.159 50.000 8.43 0.00 0.00 3.41
190 191 3.490419 CCCTACTTAGCGCGTTTACTGAT 60.490 47.826 8.43 0.00 0.00 2.90
191 192 4.261322 CCCTACTTAGCGCGTTTACTGATA 60.261 45.833 8.43 0.00 0.00 2.15
192 193 5.458891 CCTACTTAGCGCGTTTACTGATAT 58.541 41.667 8.43 0.00 0.00 1.63
193 194 5.568296 CCTACTTAGCGCGTTTACTGATATC 59.432 44.000 8.43 0.00 0.00 1.63
194 195 5.184340 ACTTAGCGCGTTTACTGATATCT 57.816 39.130 8.43 0.00 0.00 1.98
195 196 5.213675 ACTTAGCGCGTTTACTGATATCTC 58.786 41.667 8.43 0.00 0.00 2.75
196 197 3.992260 AGCGCGTTTACTGATATCTCT 57.008 42.857 8.43 0.00 0.00 3.10
197 198 6.204301 ACTTAGCGCGTTTACTGATATCTCTA 59.796 38.462 8.43 0.00 0.00 2.43
198 199 5.630661 AGCGCGTTTACTGATATCTCTAT 57.369 39.130 8.43 0.00 0.00 1.98
199 200 6.015027 AGCGCGTTTACTGATATCTCTATT 57.985 37.500 8.43 0.00 0.00 1.73
200 201 7.142306 AGCGCGTTTACTGATATCTCTATTA 57.858 36.000 8.43 0.00 0.00 0.98
201 202 7.591165 AGCGCGTTTACTGATATCTCTATTAA 58.409 34.615 8.43 0.00 0.00 1.40
202 203 8.244802 AGCGCGTTTACTGATATCTCTATTAAT 58.755 33.333 8.43 0.00 0.00 1.40
203 204 9.499585 GCGCGTTTACTGATATCTCTATTAATA 57.500 33.333 8.43 0.00 0.00 0.98
216 217 7.649533 TCTCTATTAATACCAACTTGTCCGA 57.350 36.000 0.00 0.00 0.00 4.55
217 218 7.486647 TCTCTATTAATACCAACTTGTCCGAC 58.513 38.462 0.00 0.00 0.00 4.79
218 219 7.123098 TCTCTATTAATACCAACTTGTCCGACA 59.877 37.037 0.00 0.00 0.00 4.35
219 220 7.788026 TCTATTAATACCAACTTGTCCGACAT 58.212 34.615 1.09 0.00 0.00 3.06
220 221 6.920569 ATTAATACCAACTTGTCCGACATC 57.079 37.500 1.09 0.00 0.00 3.06
228 229 5.280945 CAACTTGTCCGACATCAATTTTGT 58.719 37.500 1.09 0.00 0.00 2.83
231 232 4.481930 TGTCCGACATCAATTTTGTGAC 57.518 40.909 0.00 0.40 0.00 3.67
249 250 2.501128 CGCTCACGGATCCACCAT 59.499 61.111 13.41 0.00 38.90 3.55
251 252 1.826024 GCTCACGGATCCACCATCT 59.174 57.895 13.41 0.00 38.90 2.90
252 253 0.249657 GCTCACGGATCCACCATCTC 60.250 60.000 13.41 0.00 38.90 2.75
263 264 3.917760 CCATCTCGACGAGCCCCC 61.918 72.222 20.11 0.00 0.00 5.40
264 265 3.147595 CATCTCGACGAGCCCCCA 61.148 66.667 20.11 2.65 0.00 4.96
274 275 0.609131 CGAGCCCCCACATCAGTTTT 60.609 55.000 0.00 0.00 0.00 2.43
275 276 0.890683 GAGCCCCCACATCAGTTTTG 59.109 55.000 0.00 0.00 0.00 2.44
276 277 0.542702 AGCCCCCACATCAGTTTTGG 60.543 55.000 0.00 0.00 0.00 3.28
316 318 0.608640 ACGAGGTGAACATGGAGGAC 59.391 55.000 0.00 0.00 0.00 3.85
319 321 2.704572 GAGGTGAACATGGAGGACTTG 58.295 52.381 0.00 0.00 0.00 3.16
321 323 1.614317 GGTGAACATGGAGGACTTGGG 60.614 57.143 0.00 0.00 0.00 4.12
337 339 4.561752 ACTTGGGCTACCTAGATCAGATT 58.438 43.478 0.00 0.00 41.45 2.40
349 351 3.877559 AGATCAGATTGCAATCGTTGGA 58.122 40.909 28.88 24.05 40.35 3.53
350 352 3.875727 AGATCAGATTGCAATCGTTGGAG 59.124 43.478 28.88 17.24 40.35 3.86
351 353 1.739466 TCAGATTGCAATCGTTGGAGC 59.261 47.619 28.88 7.94 40.35 4.70
352 354 1.469703 CAGATTGCAATCGTTGGAGCA 59.530 47.619 28.88 0.00 40.35 4.26
353 355 1.741706 AGATTGCAATCGTTGGAGCAG 59.258 47.619 28.88 0.00 40.35 4.24
354 356 0.171903 ATTGCAATCGTTGGAGCAGC 59.828 50.000 5.99 0.00 38.35 5.25
355 357 1.171549 TTGCAATCGTTGGAGCAGCA 61.172 50.000 0.00 0.00 38.35 4.41
356 358 1.136147 GCAATCGTTGGAGCAGCAG 59.864 57.895 0.00 0.00 0.00 4.24
357 359 1.580845 GCAATCGTTGGAGCAGCAGT 61.581 55.000 0.00 0.00 0.00 4.40
358 360 0.877071 CAATCGTTGGAGCAGCAGTT 59.123 50.000 0.00 0.00 0.00 3.16
359 361 1.267806 CAATCGTTGGAGCAGCAGTTT 59.732 47.619 0.00 0.00 0.00 2.66
360 362 1.160137 ATCGTTGGAGCAGCAGTTTC 58.840 50.000 0.00 0.00 0.00 2.78
361 363 0.106708 TCGTTGGAGCAGCAGTTTCT 59.893 50.000 0.00 0.00 0.00 2.52
362 364 1.343142 TCGTTGGAGCAGCAGTTTCTA 59.657 47.619 0.00 0.00 0.00 2.10
363 365 1.461127 CGTTGGAGCAGCAGTTTCTAC 59.539 52.381 0.00 0.00 0.00 2.59
375 377 3.614616 GCAGTTTCTACGATCTGAACCAG 59.385 47.826 0.00 0.00 0.00 4.00
377 379 4.082190 CAGTTTCTACGATCTGAACCAGGA 60.082 45.833 0.00 0.00 31.51 3.86
394 396 3.554129 CCAGGAATGTCGTACAACACTGA 60.554 47.826 4.97 0.00 30.55 3.41
401 403 7.117236 GGAATGTCGTACAACACTGAAGATTAA 59.883 37.037 0.00 0.00 30.55 1.40
407 409 6.020599 CGTACAACACTGAAGATTAATCCTCG 60.021 42.308 11.92 7.81 0.00 4.63
408 410 5.794894 ACAACACTGAAGATTAATCCTCGT 58.205 37.500 11.92 8.37 0.00 4.18
417 419 6.602009 TGAAGATTAATCCTCGTGAGACTACA 59.398 38.462 11.92 0.00 35.39 2.74
420 422 2.060050 ATCCTCGTGAGACTACAGGG 57.940 55.000 0.00 0.00 35.39 4.45
421 423 0.989602 TCCTCGTGAGACTACAGGGA 59.010 55.000 0.00 0.00 35.39 4.20
422 424 1.065345 TCCTCGTGAGACTACAGGGAG 60.065 57.143 0.00 0.00 35.39 4.30
423 425 1.384525 CTCGTGAGACTACAGGGAGG 58.615 60.000 0.00 0.00 35.39 4.30
424 426 0.697079 TCGTGAGACTACAGGGAGGT 59.303 55.000 0.00 0.00 33.31 3.85
425 427 0.811915 CGTGAGACTACAGGGAGGTG 59.188 60.000 0.00 0.00 0.00 4.00
445 447 2.093500 TGAGAATCACTGGTTGGATCGG 60.093 50.000 0.00 0.00 42.56 4.18
456 458 0.549169 TTGGATCGGGAAGAAGGGGT 60.549 55.000 0.00 0.00 0.00 4.95
505 507 3.694566 TGGATATATGACGAGATCACCGG 59.305 47.826 0.00 0.00 41.24 5.28
516 518 2.101582 GAGATCACCGGCAACTGATACT 59.898 50.000 0.00 3.13 32.11 2.12
532 534 5.780793 ACTGATACTACTTGTGAGGGAAACT 59.219 40.000 0.00 0.00 0.00 2.66
540 542 0.868406 GTGAGGGAAACTCTTGTGCG 59.132 55.000 0.00 0.00 46.72 5.34
554 556 5.163824 ACTCTTGTGCGACAATATTCATGTG 60.164 40.000 0.00 0.00 37.48 3.21
557 559 6.370166 TCTTGTGCGACAATATTCATGTGTTA 59.630 34.615 0.00 0.00 37.48 2.41
580 582 3.605634 TCCTTATTGAACATGTCCACGG 58.394 45.455 0.00 0.00 0.00 4.94
581 583 3.008594 TCCTTATTGAACATGTCCACGGT 59.991 43.478 0.00 0.00 0.00 4.83
582 584 4.223255 TCCTTATTGAACATGTCCACGGTA 59.777 41.667 0.00 0.00 0.00 4.02
588 590 3.057104 TGAACATGTCCACGGTAGTGTAG 60.057 47.826 0.00 0.00 46.56 2.74
589 591 2.799017 ACATGTCCACGGTAGTGTAGA 58.201 47.619 0.00 0.00 46.56 2.59
603 605 5.927115 GGTAGTGTAGAATATGTAGCAAGCC 59.073 44.000 0.00 0.00 0.00 4.35
604 606 5.878406 AGTGTAGAATATGTAGCAAGCCT 57.122 39.130 0.00 0.00 0.00 4.58
633 635 5.927281 AAGATAAACCCGCAGACTAACTA 57.073 39.130 0.00 0.00 0.00 2.24
664 666 3.089788 GGTGAAACTTGTCCACCGT 57.910 52.632 0.00 0.00 40.61 4.83
668 670 2.162809 GTGAAACTTGTCCACCGTGTTT 59.837 45.455 0.00 0.00 34.15 2.83
670 672 4.008330 TGAAACTTGTCCACCGTGTTTAA 58.992 39.130 0.00 0.00 32.01 1.52
671 673 4.095185 TGAAACTTGTCCACCGTGTTTAAG 59.905 41.667 0.00 1.76 32.01 1.85
676 678 4.619437 TGTCCACCGTGTTTAAGTTTTC 57.381 40.909 0.00 0.00 0.00 2.29
682 684 6.480981 TCCACCGTGTTTAAGTTTTCTTCTAG 59.519 38.462 0.00 0.00 40.91 2.43
686 688 7.767659 ACCGTGTTTAAGTTTTCTTCTAGACTT 59.232 33.333 0.00 0.00 40.91 3.01
690 692 8.823818 TGTTTAAGTTTTCTTCTAGACTTTCCG 58.176 33.333 0.00 0.00 40.91 4.30
691 693 9.038803 GTTTAAGTTTTCTTCTAGACTTTCCGA 57.961 33.333 0.00 0.00 40.91 4.55
692 694 9.774413 TTTAAGTTTTCTTCTAGACTTTCCGAT 57.226 29.630 0.00 0.00 40.91 4.18
694 696 6.994221 AGTTTTCTTCTAGACTTTCCGATGA 58.006 36.000 0.00 0.00 0.00 2.92
715 717 1.275291 TGCTCTTTTAGTGGGTCTCGG 59.725 52.381 0.00 0.00 0.00 4.63
728 730 0.992802 GTCTCGGCAATGACTTCGTC 59.007 55.000 0.00 0.00 0.00 4.20
732 734 1.999735 TCGGCAATGACTTCGTCAATC 59.000 47.619 0.36 0.00 45.96 2.67
735 737 3.002791 GGCAATGACTTCGTCAATCTCA 58.997 45.455 0.36 0.00 45.96 3.27
736 738 3.063180 GGCAATGACTTCGTCAATCTCAG 59.937 47.826 0.36 0.00 45.96 3.35
742 744 4.220602 TGACTTCGTCAATCTCAGGATTCA 59.779 41.667 0.00 0.00 39.78 2.57
748 750 4.261614 CGTCAATCTCAGGATTCATCGGTA 60.262 45.833 0.00 0.00 39.87 4.02
749 751 4.985409 GTCAATCTCAGGATTCATCGGTAC 59.015 45.833 0.00 0.00 39.87 3.34
752 754 3.632333 TCTCAGGATTCATCGGTACAGT 58.368 45.455 0.00 0.00 0.00 3.55
762 764 4.332828 TCATCGGTACAGTCTCTCAAAGA 58.667 43.478 0.00 0.00 0.00 2.52
768 770 3.229276 ACAGTCTCTCAAAGATGCTCG 57.771 47.619 0.00 0.00 36.11 5.03
770 772 3.759086 ACAGTCTCTCAAAGATGCTCGTA 59.241 43.478 0.00 0.00 36.11 3.43
793 795 3.575506 CAGGGTATGCATGTGTGGT 57.424 52.632 10.16 0.00 0.00 4.16
815 817 5.410439 GGTTTCATATGGTTTGAGTGTACGT 59.590 40.000 2.13 0.00 0.00 3.57
831 833 3.491639 TGTACGTGTGTGTACTGCATTTC 59.508 43.478 0.00 0.00 44.01 2.17
848 850 6.675026 TGCATTTCTCTCATCTCAAAAAGTG 58.325 36.000 0.00 0.00 0.00 3.16
856 858 7.012704 TCTCTCATCTCAAAAAGTGAAACAAGG 59.987 37.037 0.00 0.00 41.43 3.61
878 880 0.178894 AGCCCTTGGGCCTGATTTTT 60.179 50.000 25.53 3.04 35.12 1.94
896 898 2.638480 TTCAGGTCCCAACTCACTTG 57.362 50.000 0.00 0.00 0.00 3.16
897 899 1.507140 TCAGGTCCCAACTCACTTGT 58.493 50.000 0.00 0.00 0.00 3.16
898 900 1.416401 TCAGGTCCCAACTCACTTGTC 59.584 52.381 0.00 0.00 0.00 3.18
953 955 1.152546 GAGCCTCTCCTCTCCCCTC 60.153 68.421 0.00 0.00 0.00 4.30
977 985 2.388347 GCTCCAAAGCCGATCTGAC 58.612 57.895 0.00 0.00 43.10 3.51
986 994 3.222173 AGCCGATCTGACTGATACTCT 57.778 47.619 0.00 0.00 35.14 3.24
997 1005 2.224917 ACTGATACTCTCTCCGATCCCC 60.225 54.545 0.00 0.00 0.00 4.81
1066 1079 4.207281 CGATCGGAAGCGGCCTCA 62.207 66.667 7.38 0.00 0.00 3.86
1130 1143 3.838795 GCGGCGTACGTGAAGCTG 61.839 66.667 17.90 13.77 46.52 4.24
1186 1199 4.493747 CGGGCTCCTCGTCGGAAC 62.494 72.222 0.00 0.00 42.53 3.62
1187 1200 3.069318 GGGCTCCTCGTCGGAACT 61.069 66.667 0.00 0.00 42.53 3.01
1529 1542 1.607467 GCTTGGGTGCTGATTGGGT 60.607 57.895 0.00 0.00 0.00 4.51
1556 1570 6.154363 TCTCCTTTCTGATTTTGTGTTGGTTT 59.846 34.615 0.00 0.00 0.00 3.27
1557 1571 6.105333 TCCTTTCTGATTTTGTGTTGGTTTG 58.895 36.000 0.00 0.00 0.00 2.93
1558 1572 6.071108 TCCTTTCTGATTTTGTGTTGGTTTGA 60.071 34.615 0.00 0.00 0.00 2.69
1559 1573 6.762661 CCTTTCTGATTTTGTGTTGGTTTGAT 59.237 34.615 0.00 0.00 0.00 2.57
1560 1574 7.042523 CCTTTCTGATTTTGTGTTGGTTTGATC 60.043 37.037 0.00 0.00 0.00 2.92
1642 1658 0.824109 TTCAGGTACTCGCCCATGAG 59.176 55.000 0.00 0.00 41.86 2.90
1667 1690 5.902613 TCAGTATCCCTTCATTGCTTTTG 57.097 39.130 0.00 0.00 0.00 2.44
1673 1696 4.897140 TCCCTTCATTGCTTTTGAATTGG 58.103 39.130 0.00 0.00 32.94 3.16
1676 1699 6.213195 TCCCTTCATTGCTTTTGAATTGGTAT 59.787 34.615 0.00 0.00 32.94 2.73
1679 1702 7.277098 CCTTCATTGCTTTTGAATTGGTATCAG 59.723 37.037 0.00 0.00 32.94 2.90
1681 1704 4.095410 TGCTTTTGAATTGGTATCAGCG 57.905 40.909 0.00 0.00 0.00 5.18
1685 1708 4.898829 TTTGAATTGGTATCAGCGGATG 57.101 40.909 9.82 0.00 34.89 3.51
1707 1738 8.592809 GGATGAGTATGTTTCCTGAGATATCTT 58.407 37.037 6.70 0.00 0.00 2.40
1708 1739 9.638239 GATGAGTATGTTTCCTGAGATATCTTC 57.362 37.037 6.70 1.22 0.00 2.87
1709 1740 8.774546 TGAGTATGTTTCCTGAGATATCTTCT 57.225 34.615 6.70 0.00 37.41 2.85
1710 1741 9.868160 TGAGTATGTTTCCTGAGATATCTTCTA 57.132 33.333 6.70 0.00 33.74 2.10
1731 1762 7.935338 TCTAAGTGAGTTTTTACTGGTAACG 57.065 36.000 0.00 0.00 42.51 3.18
1839 2237 6.671614 TTAATTGTTCGAATGCTCGGTTAT 57.328 33.333 0.00 0.00 45.49 1.89
1927 2326 3.595173 TGTTCGAATGATGAATGGTCGT 58.405 40.909 0.00 0.00 33.55 4.34
1992 2391 9.545105 TTCATTTTTCATGCATTGAACTAGTTT 57.455 25.926 10.02 0.00 43.99 2.66
2027 2426 3.315191 TCGGGAAGAGAAAGTTTGCTTTG 59.685 43.478 0.00 0.00 44.25 2.77
2263 2735 4.406069 CTGAACCAACATGCAAACTATCG 58.594 43.478 0.00 0.00 0.00 2.92
2304 2776 2.300723 TGAAATGCAAGCAGCCATCTTT 59.699 40.909 0.00 0.00 44.83 2.52
2409 2881 2.712057 GGTGCAATCTGTTCACCTTG 57.288 50.000 3.59 0.00 45.04 3.61
2439 2911 1.534595 GCAGGAGTAGCAGCAATATGC 59.465 52.381 0.00 0.00 46.88 3.14
2463 2935 2.949177 TTTTAAGGAGAGTGGCAGCA 57.051 45.000 0.00 0.00 0.00 4.41
2464 2936 2.949177 TTTAAGGAGAGTGGCAGCAA 57.051 45.000 0.00 0.00 0.00 3.91
2465 2937 3.439857 TTTAAGGAGAGTGGCAGCAAT 57.560 42.857 0.00 0.00 0.00 3.56
2466 2938 4.568072 TTTAAGGAGAGTGGCAGCAATA 57.432 40.909 0.00 0.00 0.00 1.90
2467 2939 4.778213 TTAAGGAGAGTGGCAGCAATAT 57.222 40.909 0.00 0.00 0.00 1.28
2468 2940 2.634815 AGGAGAGTGGCAGCAATATG 57.365 50.000 0.00 0.00 0.00 1.78
2490 2962 9.979897 ATATGTTTGGGCATATGTGTTCTATAT 57.020 29.630 4.29 0.00 39.70 0.86
2494 2966 9.672673 GTTTGGGCATATGTGTTCTATATCTAT 57.327 33.333 4.29 0.00 0.00 1.98
2595 3067 9.981114 AACTTGTTAGGTTAAGATTTTTGGATG 57.019 29.630 0.00 0.00 0.00 3.51
2596 3068 8.088365 ACTTGTTAGGTTAAGATTTTTGGATGC 58.912 33.333 0.00 0.00 0.00 3.91
2597 3069 7.775053 TGTTAGGTTAAGATTTTTGGATGCT 57.225 32.000 0.00 0.00 0.00 3.79
2598 3070 7.826690 TGTTAGGTTAAGATTTTTGGATGCTC 58.173 34.615 0.00 0.00 0.00 4.26
2599 3071 5.567138 AGGTTAAGATTTTTGGATGCTCG 57.433 39.130 0.00 0.00 0.00 5.03
2600 3072 5.253330 AGGTTAAGATTTTTGGATGCTCGA 58.747 37.500 0.00 0.00 0.00 4.04
2601 3073 5.123979 AGGTTAAGATTTTTGGATGCTCGAC 59.876 40.000 0.00 0.00 0.00 4.20
2602 3074 5.123979 GGTTAAGATTTTTGGATGCTCGACT 59.876 40.000 0.00 0.00 0.00 4.18
2687 3239 4.917415 GCATCGCAAAGTGTTACTTTTCAT 59.083 37.500 4.32 0.00 45.38 2.57
2814 3366 7.391275 TGACTGAGATTTGTTTCAATCTGCATA 59.609 33.333 0.64 0.00 36.01 3.14
2824 3377 7.042950 TGTTTCAATCTGCATATTTGAATGGG 58.957 34.615 15.39 0.00 38.68 4.00
2850 3403 4.835678 TGCTCAGTCTGCATATTCTGAAA 58.164 39.130 0.00 2.36 36.67 2.69
2851 3404 5.434408 TGCTCAGTCTGCATATTCTGAAAT 58.566 37.500 0.00 0.00 36.67 2.17
2852 3405 5.296035 TGCTCAGTCTGCATATTCTGAAATG 59.704 40.000 0.00 1.72 36.67 2.32
2878 3433 8.462016 GCACTGTGGATGAATTTTAGATAACTT 58.538 33.333 10.21 0.00 0.00 2.66
2994 3589 4.566907 GGCAGGGTTACAATCCTTGACTAA 60.567 45.833 0.00 0.00 37.45 2.24
3071 3667 0.400594 ACACTAACCAGGCCCTGAAC 59.599 55.000 13.74 0.00 32.44 3.18
3074 3670 2.505819 CACTAACCAGGCCCTGAACTAT 59.494 50.000 13.74 0.00 32.44 2.12
3075 3671 3.709653 CACTAACCAGGCCCTGAACTATA 59.290 47.826 13.74 0.00 32.44 1.31
3076 3672 3.710165 ACTAACCAGGCCCTGAACTATAC 59.290 47.826 13.74 0.00 32.44 1.47
3151 4149 4.153655 AGAAAAACGCGAGGGACTAAATTC 59.846 41.667 15.93 2.53 41.55 2.17
3165 4163 5.365895 GGACTAAATTCCCTGGCTAAGAGTA 59.634 44.000 0.00 0.00 0.00 2.59
3184 4183 5.938125 AGAGTAATGATAAAACGCCAACACT 59.062 36.000 0.00 0.00 0.00 3.55
3234 4233 4.796618 CATGACACATTGTTTCATGGCACA 60.797 41.667 27.20 5.65 43.09 4.57
3293 4292 0.473326 AGGCTGGATCAGATGGAAGC 59.527 55.000 0.00 0.00 32.44 3.86
3413 4412 5.861251 CCTCGATGATATCAGCAAGTAAGTC 59.139 44.000 20.22 4.68 31.58 3.01
3414 4413 6.391227 TCGATGATATCAGCAAGTAAGTCA 57.609 37.500 20.22 0.00 31.58 3.41
3530 4530 4.638421 TCTGTTTACATTATTCCCCTTGCG 59.362 41.667 0.00 0.00 0.00 4.85
3537 4537 4.953579 ACATTATTCCCCTTGCGTATTTGT 59.046 37.500 0.00 0.00 0.00 2.83
3555 4555 1.012486 GTAGGGACTGGTTGAACGCG 61.012 60.000 3.53 3.53 41.52 6.01
3571 4571 2.260869 GCGAGCCTGCTTGGTTGAA 61.261 57.895 8.41 0.00 38.35 2.69
3665 4665 2.549754 CCAGATCACTGCGTTTCACTTT 59.450 45.455 0.00 0.00 42.25 2.66
3710 4710 9.593134 TGGCATGGTTTTGTAATTTAATATGAC 57.407 29.630 0.00 0.00 0.00 3.06
3746 4746 0.038166 ACCCCATGTGTTCTTGCGAT 59.962 50.000 0.00 0.00 0.00 4.58
3760 4760 3.126858 TCTTGCGATGATTTGTAGCCAAC 59.873 43.478 0.00 0.00 0.00 3.77
3801 4801 6.816136 AGAAAAACTGTGATTGTAAAAGGGG 58.184 36.000 0.00 0.00 0.00 4.79
3804 4804 2.158385 ACTGTGATTGTAAAAGGGGGCA 60.158 45.455 0.00 0.00 0.00 5.36
3876 4876 1.065926 TGTCATGGCAGTCTCCATCAC 60.066 52.381 0.00 1.17 44.63 3.06
3928 4928 3.760151 TGCCTTCTTCATCATTTGACTGG 59.240 43.478 0.00 0.00 32.84 4.00
3960 4960 6.572519 TCATTTTCTTTGTCCTGTTTTGAGG 58.427 36.000 0.00 0.00 0.00 3.86
4013 5013 9.797642 ACTGGATATCTGATTAATTGCACATTA 57.202 29.630 2.05 0.00 0.00 1.90
4018 5018 6.135290 TCTGATTAATTGCACATTAGCACC 57.865 37.500 0.00 0.00 45.61 5.01
4046 5047 8.964476 TTCTCAATACCTGTTATCAAGGATTC 57.036 34.615 0.00 0.00 0.00 2.52
4051 5052 9.956720 CAATACCTGTTATCAAGGATTCATTTC 57.043 33.333 0.00 0.00 0.00 2.17
4055 5056 8.869109 ACCTGTTATCAAGGATTCATTTCAAAA 58.131 29.630 0.00 0.00 0.00 2.44
4113 5114 5.355350 AGAAGAATTACAGAAATGGAAGCCG 59.645 40.000 0.00 0.00 0.00 5.52
4122 5123 1.923356 AATGGAAGCCGGTGTTTCAT 58.077 45.000 1.90 4.89 33.74 2.57
4140 5141 6.040054 TGTTTCATCCAGCATATTCCTGATTG 59.960 38.462 2.43 0.99 32.03 2.67
4147 5148 6.712095 TCCAGCATATTCCTGATTGTACATTC 59.288 38.462 10.22 10.22 32.03 2.67
4163 5164 8.716619 TTGTACATTCGAAAAGGATAAAAACG 57.283 30.769 0.00 0.00 0.00 3.60
4165 5166 8.344098 TGTACATTCGAAAAGGATAAAAACGTT 58.656 29.630 0.00 0.00 0.00 3.99
4212 5213 8.691797 GTGGTGATTGGCTATTTTAAAATAGGA 58.308 33.333 33.56 13.57 45.03 2.94
4214 5215 8.141909 GGTGATTGGCTATTTTAAAATAGGACC 58.858 37.037 33.56 28.60 45.03 4.46
4217 5218 7.562454 TTGGCTATTTTAAAATAGGACCGAG 57.438 36.000 33.56 19.26 45.03 4.63
4235 5236 5.730550 ACCGAGTCATCAGCACTTTAAATA 58.269 37.500 0.00 0.00 0.00 1.40
4237 5238 6.653320 ACCGAGTCATCAGCACTTTAAATAAA 59.347 34.615 0.00 0.00 0.00 1.40
4238 5239 7.336931 ACCGAGTCATCAGCACTTTAAATAAAT 59.663 33.333 0.00 0.00 0.00 1.40
4239 5240 7.641411 CCGAGTCATCAGCACTTTAAATAAATG 59.359 37.037 0.00 0.00 0.00 2.32
4240 5241 8.390354 CGAGTCATCAGCACTTTAAATAAATGA 58.610 33.333 0.00 0.00 0.00 2.57
4296 5297 7.428282 TGTTTATAATTTGTCTTCGTGCTCA 57.572 32.000 0.00 0.00 0.00 4.26
4306 5308 1.869767 CTTCGTGCTCAGCTTTGTCTT 59.130 47.619 0.00 0.00 0.00 3.01
4311 5313 1.221414 GCTCAGCTTTGTCTTGACGT 58.779 50.000 0.00 0.00 0.00 4.34
4361 5366 7.968956 TGTGTACGTTTCAACAACAACAATAAT 59.031 29.630 0.00 0.00 0.00 1.28
4390 6066 0.798776 CATTGGCTTCTCCGTGTCAC 59.201 55.000 0.00 0.00 37.80 3.67
4463 6139 1.872952 TCGCAACAACAACCTCATCAG 59.127 47.619 0.00 0.00 0.00 2.90
4465 6141 1.336240 GCAACAACAACCTCATCAGGC 60.336 52.381 0.00 0.00 45.05 4.85
4477 6153 1.001641 ATCAGGCTGCAAGTCCACC 60.002 57.895 10.34 0.00 41.78 4.61
4482 6158 2.433446 CTGCAAGTCCACCAGCCT 59.567 61.111 0.00 0.00 0.00 4.58
4485 6161 2.433446 CAAGTCCACCAGCCTGCT 59.567 61.111 0.00 0.00 0.00 4.24
4503 6179 1.354040 CTGTCAGAGTCATCAACGGC 58.646 55.000 0.00 0.00 0.00 5.68
4511 6187 4.269603 CAGAGTCATCAACGGCAAATAGAG 59.730 45.833 0.00 0.00 0.00 2.43
4513 6189 3.197766 AGTCATCAACGGCAAATAGAGGA 59.802 43.478 0.00 0.00 0.00 3.71
4547 6223 0.389817 TCTCACCGGTCAGCATTTCG 60.390 55.000 2.59 0.00 0.00 3.46
4618 6300 3.070015 CCATCTCCATAATTTGTTGGCCC 59.930 47.826 0.00 0.00 32.80 5.80
4635 6317 3.246057 TGGCCCATATAATCCCATGCAAT 60.246 43.478 0.00 0.00 0.00 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.816787 TCCCTATTGTATTAAAGTTTGAAACCT 57.183 29.630 4.14 0.00 0.00 3.50
8 9 9.850628 GTCCCTATTGTATTAAAGTTTGAAACC 57.149 33.333 4.14 0.00 0.00 3.27
9 10 9.850628 GGTCCCTATTGTATTAAAGTTTGAAAC 57.149 33.333 0.00 0.00 0.00 2.78
10 11 9.589461 TGGTCCCTATTGTATTAAAGTTTGAAA 57.411 29.630 0.00 0.00 0.00 2.69
11 12 9.589461 TTGGTCCCTATTGTATTAAAGTTTGAA 57.411 29.630 0.00 0.00 0.00 2.69
12 13 9.016438 GTTGGTCCCTATTGTATTAAAGTTTGA 57.984 33.333 0.00 0.00 0.00 2.69
13 14 9.020731 AGTTGGTCCCTATTGTATTAAAGTTTG 57.979 33.333 0.00 0.00 0.00 2.93
14 15 9.596308 AAGTTGGTCCCTATTGTATTAAAGTTT 57.404 29.630 0.00 0.00 0.00 2.66
15 16 9.020731 CAAGTTGGTCCCTATTGTATTAAAGTT 57.979 33.333 0.00 0.00 0.00 2.66
16 17 8.168058 ACAAGTTGGTCCCTATTGTATTAAAGT 58.832 33.333 7.96 0.00 32.58 2.66
17 18 8.575649 ACAAGTTGGTCCCTATTGTATTAAAG 57.424 34.615 7.96 0.00 32.58 1.85
18 19 9.452287 GTACAAGTTGGTCCCTATTGTATTAAA 57.548 33.333 7.96 0.00 38.28 1.52
19 20 8.828751 AGTACAAGTTGGTCCCTATTGTATTAA 58.171 33.333 7.96 0.00 38.28 1.40
20 21 8.262227 CAGTACAAGTTGGTCCCTATTGTATTA 58.738 37.037 7.96 0.00 38.28 0.98
21 22 7.037873 TCAGTACAAGTTGGTCCCTATTGTATT 60.038 37.037 7.96 6.39 38.28 1.89
22 23 6.442564 TCAGTACAAGTTGGTCCCTATTGTAT 59.557 38.462 7.96 2.23 38.28 2.29
23 24 5.781306 TCAGTACAAGTTGGTCCCTATTGTA 59.219 40.000 7.96 6.03 35.77 2.41
24 25 4.595781 TCAGTACAAGTTGGTCCCTATTGT 59.404 41.667 7.96 7.57 37.77 2.71
25 26 5.160607 TCAGTACAAGTTGGTCCCTATTG 57.839 43.478 7.96 0.00 0.00 1.90
26 27 5.836024 TTCAGTACAAGTTGGTCCCTATT 57.164 39.130 7.96 0.00 0.00 1.73
27 28 5.726793 AGATTCAGTACAAGTTGGTCCCTAT 59.273 40.000 7.96 0.00 0.00 2.57
28 29 5.091552 AGATTCAGTACAAGTTGGTCCCTA 58.908 41.667 7.96 0.00 0.00 3.53
29 30 3.910627 AGATTCAGTACAAGTTGGTCCCT 59.089 43.478 7.96 0.00 0.00 4.20
30 31 4.254492 GAGATTCAGTACAAGTTGGTCCC 58.746 47.826 7.96 0.00 0.00 4.46
31 32 4.691216 GTGAGATTCAGTACAAGTTGGTCC 59.309 45.833 7.96 0.00 0.00 4.46
32 33 4.691216 GGTGAGATTCAGTACAAGTTGGTC 59.309 45.833 7.96 0.00 0.00 4.02
33 34 4.642429 GGTGAGATTCAGTACAAGTTGGT 58.358 43.478 7.96 0.00 0.00 3.67
34 35 3.679980 CGGTGAGATTCAGTACAAGTTGG 59.320 47.826 7.96 0.00 0.00 3.77
35 36 4.556233 TCGGTGAGATTCAGTACAAGTTG 58.444 43.478 0.00 0.00 0.00 3.16
36 37 4.866508 TCGGTGAGATTCAGTACAAGTT 57.133 40.909 0.00 0.00 0.00 2.66
37 38 4.322049 CCTTCGGTGAGATTCAGTACAAGT 60.322 45.833 0.00 0.00 0.00 3.16
38 39 4.177026 CCTTCGGTGAGATTCAGTACAAG 58.823 47.826 0.00 0.00 0.00 3.16
39 40 3.576982 ACCTTCGGTGAGATTCAGTACAA 59.423 43.478 0.00 0.00 32.98 2.41
40 41 3.162666 ACCTTCGGTGAGATTCAGTACA 58.837 45.455 0.00 0.00 32.98 2.90
41 42 3.870633 ACCTTCGGTGAGATTCAGTAC 57.129 47.619 0.00 0.00 32.98 2.73
42 43 4.282449 TGAAACCTTCGGTGAGATTCAGTA 59.718 41.667 0.00 0.00 35.34 2.74
43 44 3.071023 TGAAACCTTCGGTGAGATTCAGT 59.929 43.478 0.00 0.00 35.34 3.41
44 45 3.433615 GTGAAACCTTCGGTGAGATTCAG 59.566 47.826 0.00 0.00 35.34 3.02
45 46 3.181459 TGTGAAACCTTCGGTGAGATTCA 60.181 43.478 0.00 0.00 35.34 2.57
46 47 3.186613 GTGTGAAACCTTCGGTGAGATTC 59.813 47.826 0.00 0.00 35.34 2.52
47 48 3.139077 GTGTGAAACCTTCGGTGAGATT 58.861 45.455 0.00 0.00 35.34 2.40
48 49 2.104111 TGTGTGAAACCTTCGGTGAGAT 59.896 45.455 0.00 0.00 35.34 2.75
49 50 1.483004 TGTGTGAAACCTTCGGTGAGA 59.517 47.619 0.00 0.00 35.34 3.27
50 51 1.948104 TGTGTGAAACCTTCGGTGAG 58.052 50.000 0.00 0.00 35.34 3.51
51 52 2.011222 GTTGTGTGAAACCTTCGGTGA 58.989 47.619 0.00 0.00 35.34 4.02
52 53 1.740585 TGTTGTGTGAAACCTTCGGTG 59.259 47.619 0.00 0.00 35.34 4.94
53 54 2.116827 TGTTGTGTGAAACCTTCGGT 57.883 45.000 0.00 0.00 37.65 4.69
54 55 2.422127 ACTTGTTGTGTGAAACCTTCGG 59.578 45.455 0.00 0.00 34.36 4.30
55 56 3.757745 ACTTGTTGTGTGAAACCTTCG 57.242 42.857 0.00 0.00 34.36 3.79
56 57 5.458779 GCATTACTTGTTGTGTGAAACCTTC 59.541 40.000 0.00 0.00 34.36 3.46
57 58 5.127031 AGCATTACTTGTTGTGTGAAACCTT 59.873 36.000 0.00 0.00 34.36 3.50
58 59 4.644685 AGCATTACTTGTTGTGTGAAACCT 59.355 37.500 0.00 0.00 34.36 3.50
59 60 4.932146 AGCATTACTTGTTGTGTGAAACC 58.068 39.130 0.00 0.00 34.36 3.27
60 61 5.821204 AGAGCATTACTTGTTGTGTGAAAC 58.179 37.500 0.00 0.00 37.35 2.78
61 62 6.449635 AAGAGCATTACTTGTTGTGTGAAA 57.550 33.333 0.00 0.00 0.00 2.69
62 63 6.449635 AAAGAGCATTACTTGTTGTGTGAA 57.550 33.333 0.00 0.00 0.00 3.18
63 64 6.449635 AAAAGAGCATTACTTGTTGTGTGA 57.550 33.333 0.00 0.00 0.00 3.58
64 65 5.687285 GGAAAAGAGCATTACTTGTTGTGTG 59.313 40.000 0.00 0.00 0.00 3.82
65 66 5.594317 AGGAAAAGAGCATTACTTGTTGTGT 59.406 36.000 0.00 0.00 0.00 3.72
66 67 6.076981 AGGAAAAGAGCATTACTTGTTGTG 57.923 37.500 0.00 0.00 0.00 3.33
67 68 7.817418 TTAGGAAAAGAGCATTACTTGTTGT 57.183 32.000 0.00 0.00 0.00 3.32
68 69 7.274250 GCATTAGGAAAAGAGCATTACTTGTTG 59.726 37.037 0.00 0.00 0.00 3.33
69 70 7.315890 GCATTAGGAAAAGAGCATTACTTGTT 58.684 34.615 0.00 0.00 0.00 2.83
70 71 6.127619 GGCATTAGGAAAAGAGCATTACTTGT 60.128 38.462 0.00 0.00 0.00 3.16
71 72 6.268566 GGCATTAGGAAAAGAGCATTACTTG 58.731 40.000 0.00 0.00 0.00 3.16
72 73 5.360999 GGGCATTAGGAAAAGAGCATTACTT 59.639 40.000 0.00 0.00 0.00 2.24
73 74 4.889995 GGGCATTAGGAAAAGAGCATTACT 59.110 41.667 0.00 0.00 0.00 2.24
74 75 4.644685 TGGGCATTAGGAAAAGAGCATTAC 59.355 41.667 0.00 0.00 0.00 1.89
75 76 4.865905 TGGGCATTAGGAAAAGAGCATTA 58.134 39.130 0.00 0.00 0.00 1.90
76 77 3.711863 TGGGCATTAGGAAAAGAGCATT 58.288 40.909 0.00 0.00 0.00 3.56
77 78 3.386932 TGGGCATTAGGAAAAGAGCAT 57.613 42.857 0.00 0.00 0.00 3.79
78 79 2.897271 TGGGCATTAGGAAAAGAGCA 57.103 45.000 0.00 0.00 0.00 4.26
79 80 2.428530 CCTTGGGCATTAGGAAAAGAGC 59.571 50.000 0.00 0.00 33.13 4.09
80 81 3.696548 GACCTTGGGCATTAGGAAAAGAG 59.303 47.826 5.88 0.00 35.45 2.85
81 82 3.563479 GGACCTTGGGCATTAGGAAAAGA 60.563 47.826 5.88 0.00 35.45 2.52
82 83 2.760650 GGACCTTGGGCATTAGGAAAAG 59.239 50.000 5.88 0.00 35.45 2.27
83 84 2.381961 AGGACCTTGGGCATTAGGAAAA 59.618 45.455 5.88 0.00 35.45 2.29
84 85 2.000048 AGGACCTTGGGCATTAGGAAA 59.000 47.619 5.88 0.00 35.45 3.13
85 86 1.681229 AGGACCTTGGGCATTAGGAA 58.319 50.000 5.88 0.00 35.45 3.36
86 87 1.564348 GAAGGACCTTGGGCATTAGGA 59.436 52.381 12.68 0.00 35.45 2.94
87 88 1.284785 TGAAGGACCTTGGGCATTAGG 59.715 52.381 12.68 0.00 37.56 2.69
88 89 2.806945 TGAAGGACCTTGGGCATTAG 57.193 50.000 12.68 0.00 0.00 1.73
89 90 2.091885 GGATGAAGGACCTTGGGCATTA 60.092 50.000 12.68 0.00 0.00 1.90
90 91 1.342374 GGATGAAGGACCTTGGGCATT 60.342 52.381 12.68 0.00 0.00 3.56
91 92 0.259938 GGATGAAGGACCTTGGGCAT 59.740 55.000 12.68 9.07 0.00 4.40
92 93 1.139498 TGGATGAAGGACCTTGGGCA 61.139 55.000 12.68 3.81 0.00 5.36
93 94 0.039618 TTGGATGAAGGACCTTGGGC 59.960 55.000 12.68 0.00 0.00 5.36
94 95 1.075374 TGTTGGATGAAGGACCTTGGG 59.925 52.381 12.68 0.00 0.00 4.12
95 96 2.162681 GTGTTGGATGAAGGACCTTGG 58.837 52.381 12.68 0.00 0.00 3.61
96 97 2.162681 GGTGTTGGATGAAGGACCTTG 58.837 52.381 12.68 0.00 0.00 3.61
97 98 2.065799 AGGTGTTGGATGAAGGACCTT 58.934 47.619 6.40 6.40 29.17 3.50
98 99 1.747444 AGGTGTTGGATGAAGGACCT 58.253 50.000 0.00 0.00 0.00 3.85
99 100 2.586648 AAGGTGTTGGATGAAGGACC 57.413 50.000 0.00 0.00 0.00 4.46
100 101 3.378427 GCATAAGGTGTTGGATGAAGGAC 59.622 47.826 0.00 0.00 0.00 3.85
101 102 3.010027 TGCATAAGGTGTTGGATGAAGGA 59.990 43.478 0.00 0.00 0.00 3.36
102 103 3.355378 TGCATAAGGTGTTGGATGAAGG 58.645 45.455 0.00 0.00 0.00 3.46
103 104 4.380867 GGTTGCATAAGGTGTTGGATGAAG 60.381 45.833 0.00 0.00 0.00 3.02
104 105 3.509575 GGTTGCATAAGGTGTTGGATGAA 59.490 43.478 0.00 0.00 0.00 2.57
105 106 3.088532 GGTTGCATAAGGTGTTGGATGA 58.911 45.455 0.00 0.00 0.00 2.92
106 107 2.824936 TGGTTGCATAAGGTGTTGGATG 59.175 45.455 0.00 0.00 0.00 3.51
107 108 3.168035 TGGTTGCATAAGGTGTTGGAT 57.832 42.857 0.00 0.00 0.00 3.41
108 109 2.666272 TGGTTGCATAAGGTGTTGGA 57.334 45.000 0.00 0.00 0.00 3.53
109 110 2.824936 TGATGGTTGCATAAGGTGTTGG 59.175 45.455 0.00 0.00 0.00 3.77
110 111 4.426416 CATGATGGTTGCATAAGGTGTTG 58.574 43.478 0.00 0.00 0.00 3.33
111 112 3.448301 CCATGATGGTTGCATAAGGTGTT 59.552 43.478 2.54 0.00 31.35 3.32
112 113 3.025978 CCATGATGGTTGCATAAGGTGT 58.974 45.455 2.54 0.00 31.35 4.16
113 114 2.363038 CCCATGATGGTTGCATAAGGTG 59.637 50.000 11.09 0.00 35.17 4.00
114 115 2.669781 CCCATGATGGTTGCATAAGGT 58.330 47.619 11.09 0.00 35.17 3.50
115 116 1.965643 CCCCATGATGGTTGCATAAGG 59.034 52.381 11.09 0.00 35.17 2.69
116 117 1.342174 GCCCCATGATGGTTGCATAAG 59.658 52.381 11.09 0.00 35.17 1.73
117 118 1.342774 TGCCCCATGATGGTTGCATAA 60.343 47.619 18.42 0.89 38.11 1.90
118 119 0.261109 TGCCCCATGATGGTTGCATA 59.739 50.000 18.42 1.51 38.11 3.14
119 120 1.001888 TGCCCCATGATGGTTGCAT 59.998 52.632 18.42 0.00 38.11 3.96
120 121 1.983481 GTGCCCCATGATGGTTGCA 60.983 57.895 18.42 18.42 39.88 4.08
121 122 2.724273 GGTGCCCCATGATGGTTGC 61.724 63.158 11.09 12.92 35.17 4.17
122 123 1.305129 TGGTGCCCCATGATGGTTG 60.305 57.895 11.09 2.24 35.17 3.77
123 124 1.305213 GTGGTGCCCCATGATGGTT 60.305 57.895 11.09 0.00 44.35 3.67
124 125 0.918799 TAGTGGTGCCCCATGATGGT 60.919 55.000 11.09 0.00 44.35 3.55
125 126 0.258484 TTAGTGGTGCCCCATGATGG 59.742 55.000 3.98 3.98 44.35 3.51
126 127 1.340893 TGTTAGTGGTGCCCCATGATG 60.341 52.381 0.00 0.00 44.35 3.07
127 128 0.998928 TGTTAGTGGTGCCCCATGAT 59.001 50.000 0.00 0.00 44.35 2.45
128 129 0.774276 TTGTTAGTGGTGCCCCATGA 59.226 50.000 0.00 0.00 44.35 3.07
129 130 1.750778 GATTGTTAGTGGTGCCCCATG 59.249 52.381 0.00 0.00 44.35 3.66
130 131 1.341976 GGATTGTTAGTGGTGCCCCAT 60.342 52.381 0.00 0.00 44.35 4.00
131 132 0.039035 GGATTGTTAGTGGTGCCCCA 59.961 55.000 0.00 0.00 38.87 4.96
132 133 0.683179 GGGATTGTTAGTGGTGCCCC 60.683 60.000 0.00 0.00 0.00 5.80
133 134 0.331616 AGGGATTGTTAGTGGTGCCC 59.668 55.000 0.00 0.00 0.00 5.36
134 135 2.215942 AAGGGATTGTTAGTGGTGCC 57.784 50.000 0.00 0.00 0.00 5.01
135 136 4.097892 CCATAAAGGGATTGTTAGTGGTGC 59.902 45.833 0.00 0.00 0.00 5.01
136 137 5.835113 CCATAAAGGGATTGTTAGTGGTG 57.165 43.478 0.00 0.00 0.00 4.17
150 151 0.970427 GGTGTGGTGCCCCATAAAGG 60.970 60.000 0.00 0.00 44.35 3.11
151 152 0.970427 GGGTGTGGTGCCCCATAAAG 60.970 60.000 0.00 0.00 44.35 1.85
152 153 1.077625 GGGTGTGGTGCCCCATAAA 59.922 57.895 0.00 0.00 44.35 1.40
153 154 2.767352 GGGTGTGGTGCCCCATAA 59.233 61.111 0.00 0.00 44.35 1.90
158 159 0.252197 CTAAGTAGGGTGTGGTGCCC 59.748 60.000 0.00 0.00 46.43 5.36
159 160 0.392595 GCTAAGTAGGGTGTGGTGCC 60.393 60.000 0.00 0.00 0.00 5.01
160 161 0.739813 CGCTAAGTAGGGTGTGGTGC 60.740 60.000 0.00 0.00 0.00 5.01
161 162 0.739813 GCGCTAAGTAGGGTGTGGTG 60.740 60.000 0.00 0.00 38.39 4.17
162 163 1.595357 GCGCTAAGTAGGGTGTGGT 59.405 57.895 0.00 0.00 38.39 4.16
163 164 1.518572 CGCGCTAAGTAGGGTGTGG 60.519 63.158 5.56 0.00 40.54 4.17
164 165 4.088421 CGCGCTAAGTAGGGTGTG 57.912 61.111 5.56 0.00 40.54 3.82
167 168 1.821136 AGTAAACGCGCTAAGTAGGGT 59.179 47.619 5.73 0.00 38.39 4.34
168 169 2.159338 TCAGTAAACGCGCTAAGTAGGG 60.159 50.000 5.73 0.00 39.06 3.53
169 170 3.141002 TCAGTAAACGCGCTAAGTAGG 57.859 47.619 5.73 0.00 0.00 3.18
170 171 6.372185 AGATATCAGTAAACGCGCTAAGTAG 58.628 40.000 5.73 0.00 0.00 2.57
171 172 6.204301 AGAGATATCAGTAAACGCGCTAAGTA 59.796 38.462 5.73 0.00 0.00 2.24
172 173 5.008811 AGAGATATCAGTAAACGCGCTAAGT 59.991 40.000 5.73 0.00 0.00 2.24
173 174 5.453648 AGAGATATCAGTAAACGCGCTAAG 58.546 41.667 5.73 0.00 0.00 2.18
174 175 5.434352 AGAGATATCAGTAAACGCGCTAA 57.566 39.130 5.73 0.00 0.00 3.09
175 176 6.738832 ATAGAGATATCAGTAAACGCGCTA 57.261 37.500 5.73 0.00 0.00 4.26
176 177 3.992260 AGAGATATCAGTAAACGCGCT 57.008 42.857 5.73 0.00 0.00 5.92
177 178 7.792383 TTAATAGAGATATCAGTAAACGCGC 57.208 36.000 5.73 0.00 0.00 6.86
190 191 9.358406 TCGGACAAGTTGGTATTAATAGAGATA 57.642 33.333 7.96 0.00 0.00 1.98
191 192 8.142551 GTCGGACAAGTTGGTATTAATAGAGAT 58.857 37.037 7.96 0.00 0.00 2.75
192 193 7.123098 TGTCGGACAAGTTGGTATTAATAGAGA 59.877 37.037 8.68 0.00 0.00 3.10
193 194 7.262772 TGTCGGACAAGTTGGTATTAATAGAG 58.737 38.462 8.68 0.00 0.00 2.43
194 195 7.172868 TGTCGGACAAGTTGGTATTAATAGA 57.827 36.000 8.68 0.00 0.00 1.98
195 196 7.709182 TGATGTCGGACAAGTTGGTATTAATAG 59.291 37.037 15.72 0.00 0.00 1.73
196 197 7.557724 TGATGTCGGACAAGTTGGTATTAATA 58.442 34.615 15.72 0.00 0.00 0.98
197 198 6.411376 TGATGTCGGACAAGTTGGTATTAAT 58.589 36.000 15.72 0.00 0.00 1.40
198 199 5.795972 TGATGTCGGACAAGTTGGTATTAA 58.204 37.500 15.72 0.00 0.00 1.40
199 200 5.408880 TGATGTCGGACAAGTTGGTATTA 57.591 39.130 15.72 0.00 0.00 0.98
200 201 4.280436 TGATGTCGGACAAGTTGGTATT 57.720 40.909 15.72 0.00 0.00 1.89
201 202 3.973206 TGATGTCGGACAAGTTGGTAT 57.027 42.857 15.72 0.00 0.00 2.73
202 203 3.755112 TTGATGTCGGACAAGTTGGTA 57.245 42.857 15.72 0.00 0.00 3.25
203 204 2.631160 TTGATGTCGGACAAGTTGGT 57.369 45.000 15.72 0.00 0.00 3.67
204 205 4.503741 AAATTGATGTCGGACAAGTTGG 57.496 40.909 15.72 0.00 34.05 3.77
205 206 5.173673 CACAAAATTGATGTCGGACAAGTTG 59.826 40.000 15.72 13.85 35.18 3.16
206 207 5.067153 TCACAAAATTGATGTCGGACAAGTT 59.933 36.000 15.72 1.45 36.20 2.66
207 208 4.578516 TCACAAAATTGATGTCGGACAAGT 59.421 37.500 15.72 0.00 0.00 3.16
208 209 4.911610 GTCACAAAATTGATGTCGGACAAG 59.088 41.667 15.72 1.13 0.00 3.16
209 210 4.261405 GGTCACAAAATTGATGTCGGACAA 60.261 41.667 15.72 0.00 29.81 3.18
210 211 3.252215 GGTCACAAAATTGATGTCGGACA 59.748 43.478 14.01 14.01 29.81 4.02
211 212 3.666902 CGGTCACAAAATTGATGTCGGAC 60.667 47.826 0.00 0.00 0.00 4.79
212 213 2.482336 CGGTCACAAAATTGATGTCGGA 59.518 45.455 0.00 0.00 0.00 4.55
213 214 2.850321 CGGTCACAAAATTGATGTCGG 58.150 47.619 0.00 0.00 0.00 4.79
214 215 2.095768 AGCGGTCACAAAATTGATGTCG 60.096 45.455 0.00 5.48 0.00 4.35
215 216 3.058293 TGAGCGGTCACAAAATTGATGTC 60.058 43.478 14.39 0.00 0.00 3.06
216 217 2.884012 TGAGCGGTCACAAAATTGATGT 59.116 40.909 14.39 0.00 0.00 3.06
217 218 3.557577 TGAGCGGTCACAAAATTGATG 57.442 42.857 14.39 0.00 0.00 3.07
249 250 3.957435 ATGTGGGGGCTCGTCGAGA 62.957 63.158 26.11 3.11 0.00 4.04
251 252 3.458163 GATGTGGGGGCTCGTCGA 61.458 66.667 0.00 0.00 0.00 4.20
252 253 3.723235 CTGATGTGGGGGCTCGTCG 62.723 68.421 0.00 0.00 0.00 5.12
263 264 0.950836 TGACGCCCAAAACTGATGTG 59.049 50.000 0.00 0.00 0.00 3.21
264 265 1.686355 TTGACGCCCAAAACTGATGT 58.314 45.000 0.00 0.00 0.00 3.06
274 275 0.309302 CATTCACGTTTTGACGCCCA 59.691 50.000 0.00 0.00 32.26 5.36
275 276 0.386731 CCATTCACGTTTTGACGCCC 60.387 55.000 0.00 0.00 32.26 6.13
276 277 1.001745 GCCATTCACGTTTTGACGCC 61.002 55.000 0.00 0.00 32.26 5.68
278 279 2.720590 CGTAGCCATTCACGTTTTGACG 60.721 50.000 0.00 0.00 32.26 4.35
316 318 4.802248 GCAATCTGATCTAGGTAGCCCAAG 60.802 50.000 0.00 0.00 0.00 3.61
319 321 2.634940 TGCAATCTGATCTAGGTAGCCC 59.365 50.000 0.00 0.00 0.00 5.19
321 323 4.624882 CGATTGCAATCTGATCTAGGTAGC 59.375 45.833 31.12 6.42 33.24 3.58
337 339 1.579964 CTGCTGCTCCAACGATTGCA 61.580 55.000 0.00 0.00 0.00 4.08
349 351 2.493675 TCAGATCGTAGAAACTGCTGCT 59.506 45.455 0.00 0.00 43.58 4.24
350 352 2.881074 TCAGATCGTAGAAACTGCTGC 58.119 47.619 0.00 0.00 43.58 5.25
351 353 3.614616 GGTTCAGATCGTAGAAACTGCTG 59.385 47.826 6.44 0.00 43.58 4.41
352 354 3.258372 TGGTTCAGATCGTAGAAACTGCT 59.742 43.478 12.60 0.00 43.58 4.24
353 355 3.585862 TGGTTCAGATCGTAGAAACTGC 58.414 45.455 12.60 0.00 43.58 4.40
354 356 4.082190 TCCTGGTTCAGATCGTAGAAACTG 60.082 45.833 12.60 11.78 43.58 3.16
355 357 4.087182 TCCTGGTTCAGATCGTAGAAACT 58.913 43.478 12.60 0.00 43.58 2.66
356 358 4.451629 TCCTGGTTCAGATCGTAGAAAC 57.548 45.455 6.67 6.67 43.58 2.78
357 359 5.046591 ACATTCCTGGTTCAGATCGTAGAAA 60.047 40.000 0.00 0.00 43.58 2.52
358 360 4.466370 ACATTCCTGGTTCAGATCGTAGAA 59.534 41.667 0.00 0.00 43.58 2.10
359 361 4.023980 ACATTCCTGGTTCAGATCGTAGA 58.976 43.478 0.00 0.00 45.75 2.59
360 362 4.363999 GACATTCCTGGTTCAGATCGTAG 58.636 47.826 0.00 0.00 32.44 3.51
361 363 3.181490 CGACATTCCTGGTTCAGATCGTA 60.181 47.826 0.00 0.00 32.44 3.43
362 364 2.417379 CGACATTCCTGGTTCAGATCGT 60.417 50.000 0.00 0.00 32.44 3.73
363 365 2.196749 CGACATTCCTGGTTCAGATCG 58.803 52.381 0.00 0.00 32.44 3.69
375 377 4.304110 TCTTCAGTGTTGTACGACATTCC 58.696 43.478 18.85 6.71 0.00 3.01
377 379 7.956420 TTAATCTTCAGTGTTGTACGACATT 57.044 32.000 18.85 12.19 0.00 2.71
394 396 6.039941 CCTGTAGTCTCACGAGGATTAATCTT 59.960 42.308 14.95 7.65 0.00 2.40
401 403 1.564818 TCCCTGTAGTCTCACGAGGAT 59.435 52.381 0.00 0.00 0.00 3.24
407 409 2.096248 CTCACCTCCCTGTAGTCTCAC 58.904 57.143 0.00 0.00 0.00 3.51
408 410 1.993301 TCTCACCTCCCTGTAGTCTCA 59.007 52.381 0.00 0.00 0.00 3.27
424 426 2.093500 CCGATCCAACCAGTGATTCTCA 60.093 50.000 0.00 0.00 0.00 3.27
425 427 2.555199 CCGATCCAACCAGTGATTCTC 58.445 52.381 0.00 0.00 0.00 2.87
445 447 2.555448 CCTCCAAAAGACCCCTTCTTCC 60.555 54.545 0.00 0.00 44.41 3.46
477 479 8.855110 GGTGATCTCGTCATATATCCATAATCT 58.145 37.037 0.00 0.00 39.48 2.40
491 493 1.080093 GTTGCCGGTGATCTCGTCA 60.080 57.895 1.90 0.00 0.00 4.35
493 495 1.079819 CAGTTGCCGGTGATCTCGT 60.080 57.895 1.90 0.00 0.00 4.18
505 507 4.081642 TCCCTCACAAGTAGTATCAGTTGC 60.082 45.833 0.00 0.00 32.99 4.17
516 518 4.703897 CACAAGAGTTTCCCTCACAAGTA 58.296 43.478 0.00 0.00 43.12 2.24
532 534 4.694982 ACACATGAATATTGTCGCACAAGA 59.305 37.500 0.00 3.99 41.94 3.02
554 556 7.186804 CGTGGACATGTTCAATAAGGATTAAC 58.813 38.462 8.85 0.00 32.17 2.01
557 559 4.640201 CCGTGGACATGTTCAATAAGGATT 59.360 41.667 8.85 0.00 0.00 3.01
580 582 6.750148 AGGCTTGCTACATATTCTACACTAC 58.250 40.000 0.00 0.00 0.00 2.73
581 583 6.978674 AGGCTTGCTACATATTCTACACTA 57.021 37.500 0.00 0.00 0.00 2.74
582 584 5.878406 AGGCTTGCTACATATTCTACACT 57.122 39.130 0.00 0.00 0.00 3.55
588 590 9.712305 TCTTATTCTTAGGCTTGCTACATATTC 57.288 33.333 0.00 0.00 0.00 1.75
603 605 7.210873 AGTCTGCGGGTTTATCTTATTCTTAG 58.789 38.462 0.00 0.00 0.00 2.18
604 606 7.120923 AGTCTGCGGGTTTATCTTATTCTTA 57.879 36.000 0.00 0.00 0.00 2.10
615 617 5.203528 ACCTATAGTTAGTCTGCGGGTTTA 58.796 41.667 0.00 0.00 0.00 2.01
633 635 4.724279 AGTTTCACCACAAGGAACCTAT 57.276 40.909 0.00 0.00 38.69 2.57
661 663 7.710766 AGTCTAGAAGAAAACTTAAACACGG 57.289 36.000 0.00 0.00 0.00 4.94
664 666 8.823818 CGGAAAGTCTAGAAGAAAACTTAAACA 58.176 33.333 0.00 0.00 31.94 2.83
668 670 8.582437 TCATCGGAAAGTCTAGAAGAAAACTTA 58.418 33.333 0.00 0.00 31.94 2.24
670 672 6.994221 TCATCGGAAAGTCTAGAAGAAAACT 58.006 36.000 0.00 0.00 0.00 2.66
671 673 7.675170 GCATCATCGGAAAGTCTAGAAGAAAAC 60.675 40.741 0.00 0.00 0.00 2.43
676 678 4.942852 AGCATCATCGGAAAGTCTAGAAG 58.057 43.478 0.00 0.00 0.00 2.85
682 684 4.954092 AAAAGAGCATCATCGGAAAGTC 57.046 40.909 0.00 0.00 37.82 3.01
686 688 4.191544 CCACTAAAAGAGCATCATCGGAA 58.808 43.478 0.00 0.00 37.82 4.30
690 692 4.775236 AGACCCACTAAAAGAGCATCATC 58.225 43.478 0.00 0.00 37.82 2.92
691 693 4.681781 CGAGACCCACTAAAAGAGCATCAT 60.682 45.833 0.00 0.00 37.82 2.45
692 694 3.368427 CGAGACCCACTAAAAGAGCATCA 60.368 47.826 0.00 0.00 37.82 3.07
694 696 2.093447 CCGAGACCCACTAAAAGAGCAT 60.093 50.000 0.00 0.00 0.00 3.79
728 730 4.948847 TGTACCGATGAATCCTGAGATTG 58.051 43.478 0.00 0.00 42.93 2.67
732 734 3.634448 AGACTGTACCGATGAATCCTGAG 59.366 47.826 0.00 0.00 0.00 3.35
735 737 3.886505 GAGAGACTGTACCGATGAATCCT 59.113 47.826 0.00 0.00 0.00 3.24
736 738 3.632604 TGAGAGACTGTACCGATGAATCC 59.367 47.826 0.00 0.00 0.00 3.01
742 744 4.440802 GCATCTTTGAGAGACTGTACCGAT 60.441 45.833 0.00 0.00 37.17 4.18
748 750 2.560542 ACGAGCATCTTTGAGAGACTGT 59.439 45.455 0.00 0.00 37.17 3.55
749 751 3.229276 ACGAGCATCTTTGAGAGACTG 57.771 47.619 0.00 0.00 37.17 3.51
752 754 4.498850 GCATCTACGAGCATCTTTGAGAGA 60.499 45.833 0.00 0.00 39.13 3.10
762 764 1.704641 TACCCTGCATCTACGAGCAT 58.295 50.000 0.00 0.00 40.42 3.79
784 786 6.023357 TCAAACCATATGAAACCACACATG 57.977 37.500 3.65 0.00 0.00 3.21
785 787 5.774690 ACTCAAACCATATGAAACCACACAT 59.225 36.000 3.65 0.00 0.00 3.21
793 795 5.992829 ACACGTACACTCAAACCATATGAAA 59.007 36.000 3.65 0.00 0.00 2.69
815 817 4.335400 TGAGAGAAATGCAGTACACACA 57.665 40.909 0.00 0.00 0.00 3.72
831 833 7.137426 CCTTGTTTCACTTTTTGAGATGAGAG 58.863 38.462 0.00 0.00 34.94 3.20
878 880 1.416401 GACAAGTGAGTTGGGACCTGA 59.584 52.381 4.87 0.00 40.90 3.86
896 898 2.572191 TGGTTATGGACGATCACGAC 57.428 50.000 0.00 0.00 42.66 4.34
897 899 3.713288 GATTGGTTATGGACGATCACGA 58.287 45.455 0.00 0.00 42.66 4.35
898 900 2.471370 CGATTGGTTATGGACGATCACG 59.529 50.000 0.00 0.00 45.75 4.35
930 932 2.826738 AGAGGAGAGGCTCGCGTC 60.827 66.667 26.61 26.61 32.53 5.19
934 936 2.520741 GGGGAGAGGAGAGGCTCG 60.521 72.222 9.22 0.00 31.95 5.03
977 985 2.041081 AGGGGATCGGAGAGAGTATCAG 59.959 54.545 0.00 0.00 43.63 2.90
997 1005 0.378962 GTCGTCAGATCTGGGTCGAG 59.621 60.000 25.95 12.96 32.98 4.04
1000 1008 1.433879 CCGTCGTCAGATCTGGGTC 59.566 63.158 22.42 12.04 0.00 4.46
1039 1052 1.702491 CTTCCGATCGGGTTTTCGCC 61.702 60.000 32.79 0.00 37.00 5.54
1343 1356 3.776656 GCGTTGGCGTGGTAGTAG 58.223 61.111 0.00 0.00 40.81 2.57
1529 1542 6.154363 ACCAACACAAAATCAGAAAGGAGAAA 59.846 34.615 0.00 0.00 0.00 2.52
1556 1570 2.417787 CGTTGTCCAGCTGATCAGATCA 60.418 50.000 27.04 11.72 37.76 2.92
1557 1571 2.200067 CGTTGTCCAGCTGATCAGATC 58.800 52.381 27.04 9.03 0.00 2.75
1558 1572 1.552337 ACGTTGTCCAGCTGATCAGAT 59.448 47.619 27.04 18.40 0.00 2.90
1559 1573 0.969149 ACGTTGTCCAGCTGATCAGA 59.031 50.000 27.04 2.20 0.00 3.27
1560 1574 1.073964 CACGTTGTCCAGCTGATCAG 58.926 55.000 18.84 18.84 0.00 2.90
1642 1658 6.705863 AAAGCAATGAAGGGATACTGATTC 57.294 37.500 0.00 0.00 0.00 2.52
1667 1690 3.733337 ACTCATCCGCTGATACCAATTC 58.267 45.455 0.00 0.00 32.10 2.17
1673 1696 4.686554 GGAAACATACTCATCCGCTGATAC 59.313 45.833 0.00 0.00 32.10 2.24
1676 1699 2.766263 AGGAAACATACTCATCCGCTGA 59.234 45.455 0.00 0.00 37.05 4.26
1679 1702 3.126831 CTCAGGAAACATACTCATCCGC 58.873 50.000 0.00 0.00 37.05 5.54
1681 1704 8.133024 AGATATCTCAGGAAACATACTCATCC 57.867 38.462 0.00 0.00 0.00 3.51
1707 1738 7.649306 GTCGTTACCAGTAAAAACTCACTTAGA 59.351 37.037 0.00 0.00 0.00 2.10
1708 1739 7.357859 CGTCGTTACCAGTAAAAACTCACTTAG 60.358 40.741 0.00 0.00 0.00 2.18
1709 1740 6.417635 CGTCGTTACCAGTAAAAACTCACTTA 59.582 38.462 0.00 0.00 0.00 2.24
1710 1741 5.232838 CGTCGTTACCAGTAAAAACTCACTT 59.767 40.000 0.00 0.00 0.00 3.16
1714 1745 5.888412 TTCGTCGTTACCAGTAAAAACTC 57.112 39.130 0.00 0.00 0.00 3.01
1731 1762 6.073222 AGTCAACACATGGTCTAATTTTCGTC 60.073 38.462 0.00 0.00 0.00 4.20
1927 2326 7.389232 TCAAGAGAGAAAAGAATGCTCATGTA 58.611 34.615 0.00 0.00 0.00 2.29
2027 2426 8.029642 TCAGAAAGTATAAACTTAGCAGTTGC 57.970 34.615 0.00 0.00 45.37 4.17
2030 2429 9.944376 TGATTCAGAAAGTATAAACTTAGCAGT 57.056 29.630 0.00 0.00 45.37 4.40
2263 2735 4.081406 TCATGGCATTTAGATGGGCATAC 58.919 43.478 0.00 0.00 44.74 2.39
2335 2807 3.620488 TCTCACTTTTGCACTGAAAGGT 58.380 40.909 12.69 0.00 39.30 3.50
2443 2915 3.222173 TGCTGCCACTCTCCTTAAAAA 57.778 42.857 0.00 0.00 0.00 1.94
2444 2916 2.949177 TGCTGCCACTCTCCTTAAAA 57.051 45.000 0.00 0.00 0.00 1.52
2445 2917 2.949177 TTGCTGCCACTCTCCTTAAA 57.051 45.000 0.00 0.00 0.00 1.52
2446 2918 4.080356 ACATATTGCTGCCACTCTCCTTAA 60.080 41.667 0.00 0.00 0.00 1.85
2447 2919 3.455910 ACATATTGCTGCCACTCTCCTTA 59.544 43.478 0.00 0.00 0.00 2.69
2448 2920 2.240667 ACATATTGCTGCCACTCTCCTT 59.759 45.455 0.00 0.00 0.00 3.36
2449 2921 1.842562 ACATATTGCTGCCACTCTCCT 59.157 47.619 0.00 0.00 0.00 3.69
2450 2922 2.338577 ACATATTGCTGCCACTCTCC 57.661 50.000 0.00 0.00 0.00 3.71
2451 2923 3.181493 CCAAACATATTGCTGCCACTCTC 60.181 47.826 0.00 0.00 0.00 3.20
2452 2924 2.756760 CCAAACATATTGCTGCCACTCT 59.243 45.455 0.00 0.00 0.00 3.24
2453 2925 2.159198 CCCAAACATATTGCTGCCACTC 60.159 50.000 0.00 0.00 0.00 3.51
2454 2926 1.826720 CCCAAACATATTGCTGCCACT 59.173 47.619 0.00 0.00 0.00 4.00
2455 2927 1.740043 GCCCAAACATATTGCTGCCAC 60.740 52.381 0.00 0.00 0.00 5.01
2456 2928 0.536260 GCCCAAACATATTGCTGCCA 59.464 50.000 0.00 0.00 0.00 4.92
2457 2929 0.536260 TGCCCAAACATATTGCTGCC 59.464 50.000 0.00 0.00 0.00 4.85
2458 2930 2.607631 ATGCCCAAACATATTGCTGC 57.392 45.000 0.00 0.00 0.00 5.25
2459 2931 4.986034 CACATATGCCCAAACATATTGCTG 59.014 41.667 1.58 0.00 40.47 4.41
2460 2932 4.650588 ACACATATGCCCAAACATATTGCT 59.349 37.500 1.58 0.00 40.47 3.91
2461 2933 4.947645 ACACATATGCCCAAACATATTGC 58.052 39.130 1.58 0.00 40.47 3.56
2462 2934 6.808829 AGAACACATATGCCCAAACATATTG 58.191 36.000 1.58 0.00 40.47 1.90
2463 2935 8.710749 ATAGAACACATATGCCCAAACATATT 57.289 30.769 1.58 0.00 40.47 1.28
2464 2936 9.979897 ATATAGAACACATATGCCCAAACATAT 57.020 29.630 1.58 0.00 42.63 1.78
2465 2937 9.448438 GATATAGAACACATATGCCCAAACATA 57.552 33.333 1.58 0.00 36.96 2.29
2466 2938 8.166061 AGATATAGAACACATATGCCCAAACAT 58.834 33.333 1.58 0.00 0.00 2.71
2467 2939 7.517320 AGATATAGAACACATATGCCCAAACA 58.483 34.615 1.58 0.00 0.00 2.83
2468 2940 7.986085 AGATATAGAACACATATGCCCAAAC 57.014 36.000 1.58 0.00 0.00 2.93
2490 2962 6.782082 AACACTGCTATCTCTGTTGATAGA 57.218 37.500 17.65 0.00 45.19 1.98
2494 2966 5.243954 AGTGTAACACTGCTATCTCTGTTGA 59.756 40.000 0.00 0.00 43.63 3.18
2595 3067 0.319900 TTCAAGGTCTGCAGTCGAGC 60.320 55.000 14.67 4.44 0.00 5.03
2596 3068 2.154854 TTTCAAGGTCTGCAGTCGAG 57.845 50.000 14.67 1.76 0.00 4.04
2597 3069 2.300152 AGATTTCAAGGTCTGCAGTCGA 59.700 45.455 14.67 1.54 0.00 4.20
2598 3070 2.670414 GAGATTTCAAGGTCTGCAGTCG 59.330 50.000 14.67 0.00 0.00 4.18
2599 3071 3.932089 GAGAGATTTCAAGGTCTGCAGTC 59.068 47.826 14.67 8.19 0.00 3.51
2600 3072 3.582208 AGAGAGATTTCAAGGTCTGCAGT 59.418 43.478 14.67 0.00 0.00 4.40
2601 3073 3.933955 CAGAGAGATTTCAAGGTCTGCAG 59.066 47.826 7.63 7.63 0.00 4.41
2602 3074 3.935315 CAGAGAGATTTCAAGGTCTGCA 58.065 45.455 0.00 0.00 0.00 4.41
2687 3239 3.753294 GCTACTAGCATAGCCCTTTGA 57.247 47.619 2.96 0.00 44.39 2.69
2762 3314 7.507277 AGTTGCCACTTAGACATATGAGATAGA 59.493 37.037 10.38 0.00 0.00 1.98
2770 3322 5.187772 TCAGTCAGTTGCCACTTAGACATAT 59.812 40.000 10.02 0.00 31.23 1.78
2776 3328 3.667497 TCTCAGTCAGTTGCCACTTAG 57.333 47.619 0.00 0.00 0.00 2.18
2814 3366 4.590222 AGACTGAGCAAAACCCATTCAAAT 59.410 37.500 0.00 0.00 0.00 2.32
2824 3377 5.122869 TCAGAATATGCAGACTGAGCAAAAC 59.877 40.000 6.65 0.00 46.27 2.43
2850 3403 8.408601 GTTATCTAAAATTCATCCACAGTGCAT 58.591 33.333 0.00 0.00 0.00 3.96
2851 3404 7.611467 AGTTATCTAAAATTCATCCACAGTGCA 59.389 33.333 0.00 0.00 0.00 4.57
2852 3405 7.989826 AGTTATCTAAAATTCATCCACAGTGC 58.010 34.615 0.00 0.00 0.00 4.40
2964 3559 1.122632 TTGTAACCCTGCCTCGTGGA 61.123 55.000 7.92 0.00 34.57 4.02
2994 3589 9.601217 CCACATATTGAGTAAGCTTTACTAGTT 57.399 33.333 3.20 0.00 0.00 2.24
3093 3689 7.011950 TCACAACTGAATGTAAGTGGTAACAAG 59.988 37.037 0.00 0.00 39.54 3.16
3131 3728 2.745821 GGAATTTAGTCCCTCGCGTTTT 59.254 45.455 5.77 0.00 0.00 2.43
3151 4149 6.202954 CGTTTTATCATTACTCTTAGCCAGGG 59.797 42.308 0.00 0.00 0.00 4.45
3165 4163 7.094377 ACAGAATAGTGTTGGCGTTTTATCATT 60.094 33.333 0.00 0.00 0.00 2.57
3234 4233 1.806496 TCCCTGGTGTATAGCTGCAT 58.194 50.000 1.02 0.00 0.00 3.96
3293 4292 3.059051 GCTCTTTCAGTTTGAGCTGACTG 60.059 47.826 12.87 12.87 46.69 3.51
3413 4412 6.347240 GCTTCATGACACTTGTAGACTCTTTG 60.347 42.308 0.00 0.00 0.00 2.77
3414 4413 5.698545 GCTTCATGACACTTGTAGACTCTTT 59.301 40.000 0.00 0.00 0.00 2.52
3530 4530 4.390909 CGTTCAACCAGTCCCTACAAATAC 59.609 45.833 0.00 0.00 0.00 1.89
3537 4537 1.180456 TCGCGTTCAACCAGTCCCTA 61.180 55.000 5.77 0.00 0.00 3.53
3555 4555 0.040067 CGTTTCAACCAAGCAGGCTC 60.040 55.000 0.00 0.00 43.14 4.70
3665 4665 2.224281 CCAAATAGCTCGTCTGGCCATA 60.224 50.000 5.51 0.00 0.00 2.74
3710 4710 9.219603 CACATGGGGTAACATCTACTTATTATG 57.780 37.037 0.00 0.00 39.74 1.90
3760 4760 9.910511 CAGTTTTTCTTCATTTTTCATCAGTTG 57.089 29.630 0.00 0.00 0.00 3.16
3763 4763 9.304731 TCACAGTTTTTCTTCATTTTTCATCAG 57.695 29.630 0.00 0.00 0.00 2.90
3804 4804 4.236935 CAACGCCATTGATGTAAGCTTTT 58.763 39.130 3.20 0.00 41.23 2.27
3928 4928 9.696917 AACAGGACAAAGAAAATGATAAACATC 57.303 29.630 0.00 0.00 38.38 3.06
3957 4957 3.895232 TGTAATTCCTGCTCAGACCTC 57.105 47.619 0.00 0.00 0.00 3.85
3960 4960 3.065925 GCCAATGTAATTCCTGCTCAGAC 59.934 47.826 0.00 0.00 31.22 3.51
4013 5013 2.038557 ACAGGTATTGAGAAACGGTGCT 59.961 45.455 0.00 0.00 0.00 4.40
4018 5018 6.816640 TCCTTGATAACAGGTATTGAGAAACG 59.183 38.462 0.00 0.00 0.00 3.60
4046 5047 5.535333 ACTGGCTCTTGATGTTTTGAAATG 58.465 37.500 0.00 0.00 0.00 2.32
4051 5052 4.685924 ACAAACTGGCTCTTGATGTTTTG 58.314 39.130 0.00 0.00 0.00 2.44
4055 5056 5.355350 GCTTATACAAACTGGCTCTTGATGT 59.645 40.000 1.69 0.00 0.00 3.06
4113 5114 4.037208 CAGGAATATGCTGGATGAAACACC 59.963 45.833 0.00 0.00 31.71 4.16
4122 5123 5.628797 TGTACAATCAGGAATATGCTGGA 57.371 39.130 0.00 0.00 36.40 3.86
4140 5141 8.624028 CAACGTTTTTATCCTTTTCGAATGTAC 58.376 33.333 0.00 0.00 0.00 2.90
4147 5148 4.615541 GCTCCAACGTTTTTATCCTTTTCG 59.384 41.667 0.00 0.00 0.00 3.46
4163 5164 5.221244 ACAAAACTGAATTACTGGCTCCAAC 60.221 40.000 0.00 0.00 0.00 3.77
4165 5166 4.278170 CACAAAACTGAATTACTGGCTCCA 59.722 41.667 0.00 0.00 0.00 3.86
4212 5213 3.678056 TTAAAGTGCTGATGACTCGGT 57.322 42.857 0.00 0.00 0.00 4.69
4214 5215 8.390354 TCATTTATTTAAAGTGCTGATGACTCG 58.610 33.333 0.00 0.00 0.00 4.18
4282 5283 1.599071 CAAAGCTGAGCACGAAGACAA 59.401 47.619 7.39 0.00 0.00 3.18
4296 5297 0.468226 TCCCACGTCAAGACAAAGCT 59.532 50.000 0.72 0.00 0.00 3.74
4306 5308 5.596772 TGATCTACTATTGAATCCCACGTCA 59.403 40.000 0.00 0.00 0.00 4.35
4311 5313 9.104713 ACATATGTGATCTACTATTGAATCCCA 57.895 33.333 7.78 0.00 0.00 4.37
4341 5346 7.995998 GCAGTTATTATTGTTGTTGTTGAAACG 59.004 33.333 0.00 0.00 0.00 3.60
4361 5366 2.489329 GAGAAGCCAATGCAAGCAGTTA 59.511 45.455 9.12 0.00 41.13 2.24
4411 6087 2.426024 CCATGCCAAGAAGAACATCCAG 59.574 50.000 0.00 0.00 0.00 3.86
4454 6130 0.035630 GACTTGCAGCCTGATGAGGT 60.036 55.000 0.00 0.00 42.15 3.85
4463 6139 3.368571 GCTGGTGGACTTGCAGCC 61.369 66.667 0.00 0.00 33.21 4.85
4465 6141 1.970114 CAGGCTGGTGGACTTGCAG 60.970 63.158 6.61 0.00 0.00 4.41
4482 6158 1.337167 CCGTTGATGACTCTGACAGCA 60.337 52.381 0.00 0.00 31.85 4.41
4485 6161 0.678950 TGCCGTTGATGACTCTGACA 59.321 50.000 0.00 0.00 0.00 3.58
4511 6187 5.294552 CGGTGAGATGGAAATTTAAGTCTCC 59.705 44.000 16.98 4.73 33.04 3.71
4513 6189 5.186198 CCGGTGAGATGGAAATTTAAGTCT 58.814 41.667 0.00 0.00 0.00 3.24
4547 6223 2.729882 CACAAGTACACGAGTTACCTGC 59.270 50.000 0.00 0.00 0.00 4.85
4618 6300 6.862469 AGGGAAATTGCATGGGATTATATG 57.138 37.500 0.00 0.00 0.00 1.78
4635 6317 7.147742 ACAGAAAATCAAACAAGCTAAGGGAAA 60.148 33.333 0.00 0.00 0.00 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.