Multiple sequence alignment - TraesCS2A01G069500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G069500 chr2A 100.000 5258 0 0 1 5258 30553897 30548640 0.000000e+00 9710
1 TraesCS2A01G069500 chr2A 91.861 1155 66 9 911 2053 8147657 8148795 0.000000e+00 1587
2 TraesCS2A01G069500 chr2A 94.635 727 38 1 3246 3971 8149878 8150604 0.000000e+00 1125
3 TraesCS2A01G069500 chr2A 84.519 478 37 12 2768 3215 8149413 8149883 6.250000e-119 438
4 TraesCS2A01G069500 chr2A 91.429 280 17 2 2196 2471 8148789 8149065 1.380000e-100 377
5 TraesCS2A01G069500 chr2A 91.038 212 19 0 2560 2771 8149100 8149311 2.400000e-73 287
6 TraesCS2A01G069500 chr2A 91.870 123 10 0 5136 5258 677069821 677069943 7.000000e-39 172
7 TraesCS2A01G069500 chr2A 91.870 123 10 0 5136 5258 677101762 677101884 7.000000e-39 172
8 TraesCS2A01G069500 chr2A 91.870 123 10 0 5136 5258 677157833 677157955 7.000000e-39 172
9 TraesCS2A01G069500 chr2A 91.870 123 10 0 5136 5258 677173036 677173158 7.000000e-39 172
10 TraesCS2A01G069500 chr2A 81.868 182 31 2 1176 1356 753250417 753250237 9.120000e-33 152
11 TraesCS2A01G069500 chr2D 95.467 4765 154 30 6 4740 28734122 28729390 0.000000e+00 7546
12 TraesCS2A01G069500 chr2D 89.522 1403 75 23 911 2293 8973734 8972384 0.000000e+00 1711
13 TraesCS2A01G069500 chr2D 90.972 720 38 9 1861 2580 8849654 8848962 0.000000e+00 944
14 TraesCS2A01G069500 chr2D 92.609 460 27 5 2286 2743 8971167 8970713 0.000000e+00 654
15 TraesCS2A01G069500 chr2D 93.103 435 25 3 3539 3971 8960223 8959792 2.670000e-177 632
16 TraesCS2A01G069500 chr2D 91.221 467 37 2 3079 3541 8970639 8970173 2.670000e-177 632
17 TraesCS2A01G069500 chr2D 91.022 401 30 1 3571 3971 8839849 8839455 2.150000e-148 536
18 TraesCS2A01G069500 chr2D 85.882 425 30 13 2747 3142 8848935 8848512 4.870000e-115 425
19 TraesCS2A01G069500 chr2D 74.068 590 95 33 1176 1759 621544343 621543806 6.950000e-44 189
20 TraesCS2A01G069500 chr2D 94.681 94 5 0 3482 3575 8848509 8848416 4.240000e-31 147
21 TraesCS2A01G069500 chr2B 95.243 4709 174 28 6 4677 46092746 46088051 0.000000e+00 7409
22 TraesCS2A01G069500 chr2B 93.019 573 38 1 1483 2053 11991980 11992552 0.000000e+00 835
23 TraesCS2A01G069500 chr2B 89.624 559 31 12 3434 3965 11992888 11993446 0.000000e+00 686
24 TraesCS2A01G069500 chr2B 88.605 588 27 8 923 1500 11991408 11991965 0.000000e+00 678
25 TraesCS2A01G069500 chr2B 92.775 346 20 3 2196 2539 11992546 11992888 3.660000e-136 496
26 TraesCS2A01G069500 chr3D 88.796 1312 73 22 987 2283 564002900 564001648 0.000000e+00 1541
27 TraesCS2A01G069500 chr5B 78.819 576 109 10 933 1501 429902438 429903007 4.970000e-100 375
28 TraesCS2A01G069500 chr4B 96.491 114 4 0 5145 5258 50441096 50441209 6.950000e-44 189
29 TraesCS2A01G069500 chr4A 97.248 109 3 0 5149 5257 638721427 638721535 8.990000e-43 185
30 TraesCS2A01G069500 chr6A 96.364 110 4 0 5149 5258 5131023 5131132 1.160000e-41 182
31 TraesCS2A01G069500 chr5A 96.364 110 4 0 5149 5258 163619207 163619316 1.160000e-41 182
32 TraesCS2A01G069500 chr1B 96.364 110 4 0 5149 5258 547278945 547278836 1.160000e-41 182
33 TraesCS2A01G069500 chr7B 88.591 149 10 5 4435 4576 747310916 747311064 1.950000e-39 174


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G069500 chr2A 30548640 30553897 5257 True 9710.000000 9710 100.000000 1 5258 1 chr2A.!!$R1 5257
1 TraesCS2A01G069500 chr2A 8147657 8150604 2947 False 762.800000 1587 90.696400 911 3971 5 chr2A.!!$F5 3060
2 TraesCS2A01G069500 chr2D 28729390 28734122 4732 True 7546.000000 7546 95.467000 6 4740 1 chr2D.!!$R3 4734
3 TraesCS2A01G069500 chr2D 8970173 8973734 3561 True 999.000000 1711 91.117333 911 3541 3 chr2D.!!$R6 2630
4 TraesCS2A01G069500 chr2D 8848416 8849654 1238 True 505.333333 944 90.511667 1861 3575 3 chr2D.!!$R5 1714
5 TraesCS2A01G069500 chr2B 46088051 46092746 4695 True 7409.000000 7409 95.243000 6 4677 1 chr2B.!!$R1 4671
6 TraesCS2A01G069500 chr2B 11991408 11993446 2038 False 673.750000 835 91.005750 923 3965 4 chr2B.!!$F1 3042
7 TraesCS2A01G069500 chr3D 564001648 564002900 1252 True 1541.000000 1541 88.796000 987 2283 1 chr3D.!!$R1 1296
8 TraesCS2A01G069500 chr5B 429902438 429903007 569 False 375.000000 375 78.819000 933 1501 1 chr5B.!!$F1 568

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
538 549 2.383855 TGACTGTTTTTCCCCTGGTTG 58.616 47.619 0.00 0.0 0.00 3.77 F
1209 1244 0.604578 CAGCCCTGGATGTTTGGTTG 59.395 55.000 0.00 0.0 0.00 3.77 F
2374 3694 0.037605 GGAAGTTCCGAAGCCGAAGA 60.038 55.000 6.06 0.0 38.22 2.87 F
2931 4374 0.823460 CAAGGGAGTCAGAGAGAGCC 59.177 60.000 0.00 0.0 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1764 1850 1.276622 GGAAGACAGGAGGGTAGCAA 58.723 55.000 0.00 0.00 0.00 3.91 R
3093 4573 2.584418 CGCTCATCAGCCCGTGAG 60.584 66.667 5.68 5.68 43.56 3.51 R
4062 5574 1.548269 CTCCTTTCTTCCTCGCTGTCT 59.452 52.381 0.00 0.00 0.00 3.41 R
4894 6455 0.035152 TCGTTGCCAATGGAGCAGAT 60.035 50.000 2.05 0.00 42.17 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 7.542477 GTGATGGTAGTATGGAATCATTACTCG 59.458 40.741 0.00 0.00 34.96 4.18
50 59 3.179048 TCGTGTGCAGATACTGAAATCG 58.821 45.455 2.81 1.65 32.44 3.34
52 61 3.000674 CGTGTGCAGATACTGAAATCGTC 60.001 47.826 2.81 0.00 32.44 4.20
86 95 5.514500 TTACCTCTGTTTGGAAATAGGCT 57.486 39.130 0.00 0.00 0.00 4.58
110 119 8.673275 GCTAAATATTTCATCGTGTTCATTTCG 58.327 33.333 3.39 0.00 0.00 3.46
112 121 4.685169 ATTTCATCGTGTTCATTTCGCT 57.315 36.364 0.00 0.00 0.00 4.93
128 137 6.595326 TCATTTCGCTGATTAGATGACTGTTT 59.405 34.615 0.00 0.00 0.00 2.83
129 138 6.408858 TTTCGCTGATTAGATGACTGTTTC 57.591 37.500 0.00 0.00 0.00 2.78
137 146 8.964476 TGATTAGATGACTGTTTCTTTATCCC 57.036 34.615 0.44 0.00 0.00 3.85
158 167 3.120199 CCGAATTCTTGTTTGCAGATCGT 60.120 43.478 3.52 0.00 0.00 3.73
224 233 6.714810 AGTTTGCACACTATGTTTTCAGGATA 59.285 34.615 3.03 0.00 0.00 2.59
304 313 4.346709 TCTGTGAGGTATTTGTCTTGGACA 59.653 41.667 0.00 0.00 41.09 4.02
331 340 4.708421 AGTATTTTCTGCACATCCATTGCT 59.292 37.500 0.00 0.00 40.86 3.91
338 347 2.425668 TGCACATCCATTGCTCTTGATG 59.574 45.455 0.00 0.00 40.86 3.07
343 352 3.159213 TCCATTGCTCTTGATGGTGTT 57.841 42.857 2.64 0.00 42.72 3.32
345 354 4.858850 TCCATTGCTCTTGATGGTGTTAT 58.141 39.130 2.64 0.00 42.72 1.89
354 363 7.147567 TGCTCTTGATGGTGTTATCTGGTATTA 60.148 37.037 0.00 0.00 0.00 0.98
359 368 7.726216 TGATGGTGTTATCTGGTATTAGACAG 58.274 38.462 0.00 0.00 36.07 3.51
361 370 5.163343 TGGTGTTATCTGGTATTAGACAGGC 60.163 44.000 0.00 0.00 35.47 4.85
364 373 2.868964 TCTGGTATTAGACAGGCCCT 57.131 50.000 0.00 0.00 35.47 5.19
365 374 3.130734 TCTGGTATTAGACAGGCCCTT 57.869 47.619 0.00 0.00 35.47 3.95
397 407 8.702163 AACCTTCATTTGTTTGAACTAGTTTG 57.298 30.769 10.02 1.44 32.39 2.93
465 475 4.843728 TCATGGACAGTTATCTTTGACCC 58.156 43.478 0.00 0.00 0.00 4.46
471 481 6.183361 TGGACAGTTATCTTTGACCCAAGTTA 60.183 38.462 0.00 0.00 0.00 2.24
478 488 8.803235 GTTATCTTTGACCCAAGTTAGGAAATT 58.197 33.333 0.00 0.00 0.00 1.82
486 496 5.073008 ACCCAAGTTAGGAAATTGGCAAAAT 59.927 36.000 3.01 0.00 41.79 1.82
536 547 2.447047 AGATGACTGTTTTTCCCCTGGT 59.553 45.455 0.00 0.00 0.00 4.00
538 549 2.383855 TGACTGTTTTTCCCCTGGTTG 58.616 47.619 0.00 0.00 0.00 3.77
615 627 7.568349 TCTTGATGACCTAAATCTGCATTACT 58.432 34.615 0.00 0.00 0.00 2.24
630 642 7.751732 TCTGCATTACTGATGTGTTTAATGTC 58.248 34.615 0.00 0.00 38.07 3.06
632 644 6.148645 TGCATTACTGATGTGTTTAATGTCGT 59.851 34.615 0.00 0.00 38.07 4.34
662 674 8.758633 AGTTATTACGGAGATACATGTATTGC 57.241 34.615 19.19 13.54 0.00 3.56
666 678 5.276461 ACGGAGATACATGTATTGCTTCA 57.724 39.130 19.19 0.00 0.00 3.02
679 691 9.229784 CATGTATTGCTTCATCTCAAAACATAC 57.770 33.333 0.00 0.00 0.00 2.39
680 692 8.334263 TGTATTGCTTCATCTCAAAACATACA 57.666 30.769 0.00 0.00 0.00 2.29
681 693 8.236586 TGTATTGCTTCATCTCAAAACATACAC 58.763 33.333 0.00 0.00 0.00 2.90
699 711 4.286297 ACACTGCTTCTATGCTAACCAA 57.714 40.909 0.00 0.00 0.00 3.67
707 719 3.961849 TCTATGCTAACCAATGTGGCAA 58.038 40.909 0.00 0.00 42.67 4.52
735 747 6.867519 TGGAGTGATACAAGACTGGATTTA 57.132 37.500 0.00 0.00 0.00 1.40
739 751 7.254932 GGAGTGATACAAGACTGGATTTATTGC 60.255 40.741 0.00 0.00 0.00 3.56
919 932 6.150976 CCATTGCCTTTGATAGTGTAAACTGA 59.849 38.462 0.00 0.00 0.00 3.41
1194 1229 3.442273 TCCGTTATTTGAAATCCACAGCC 59.558 43.478 0.00 0.00 0.00 4.85
1209 1244 0.604578 CAGCCCTGGATGTTTGGTTG 59.395 55.000 0.00 0.00 0.00 3.77
1414 1460 1.082300 CTGCGTGCTGTTTCTGCTG 60.082 57.895 0.00 0.00 0.00 4.41
2331 3651 3.236816 CAAGGCTGTTAAAGATGTTGCG 58.763 45.455 0.00 0.00 0.00 4.85
2374 3694 0.037605 GGAAGTTCCGAAGCCGAAGA 60.038 55.000 6.06 0.00 38.22 2.87
2556 3882 1.447317 CTGGTAATGGTGATGGCCGC 61.447 60.000 0.00 0.00 0.00 6.53
2817 4251 2.426738 AGATCTGAAGTCTCAAGGAGCG 59.573 50.000 0.00 0.00 0.00 5.03
2931 4374 0.823460 CAAGGGAGTCAGAGAGAGCC 59.177 60.000 0.00 0.00 0.00 4.70
3126 4606 4.871933 TGAGCGTGTGGATATCATGTAT 57.128 40.909 4.83 0.00 0.00 2.29
3177 4659 5.356470 GCCAGCAGAGAAAGAAATGATTACT 59.644 40.000 0.00 0.00 0.00 2.24
3198 4680 4.079901 ACTCTCCTTCATTTCCATCTGCAT 60.080 41.667 0.00 0.00 0.00 3.96
3237 4721 4.083802 GGAAACAAGAAGACGAAGGATGTG 60.084 45.833 0.00 0.00 0.00 3.21
3342 4826 4.803426 CAGCGTGAGAGGGACCGC 62.803 72.222 0.00 0.00 46.07 5.68
3390 4875 9.444600 TTCCAGAACTATATCAACAAGGTTAAC 57.555 33.333 0.00 0.00 0.00 2.01
3438 4923 2.087646 GGGCTTGATCTGGAGTTTGAC 58.912 52.381 0.00 0.00 0.00 3.18
3468 4953 1.613630 AGAGCTCGGGTTCCATGGT 60.614 57.895 12.58 0.00 0.00 3.55
3471 4956 1.745489 GCTCGGGTTCCATGGTGTC 60.745 63.158 12.58 3.42 0.00 3.67
3783 5295 6.013898 TCCTGAAGACTATCATTGATGATCCC 60.014 42.308 9.61 2.02 43.72 3.85
3951 5463 2.007049 GCGTCGTTGGTGGAATCAGAT 61.007 52.381 0.00 0.00 0.00 2.90
4062 5574 1.144716 GGATCATGGCGCAGAGTCA 59.855 57.895 10.83 0.00 39.68 3.41
4116 5628 1.122019 AGACCTTCAGCAAGTCCGGT 61.122 55.000 0.00 0.00 0.00 5.28
4164 5679 4.728110 AAGCATGCTCCGCTGCCA 62.728 61.111 22.93 0.00 40.35 4.92
4273 5788 1.535462 GGTGATTGGTTCGTCTTGGTG 59.465 52.381 0.00 0.00 0.00 4.17
4491 6025 8.141268 ACTTGTTTGTCGTTTGGATAAATTCAT 58.859 29.630 0.00 0.00 37.93 2.57
4517 6051 2.391616 TCATCTGCTGTGTCATGGTC 57.608 50.000 0.00 0.00 0.00 4.02
4549 6083 7.364522 TGCTTTATTGTAGATTGTCTGACAC 57.635 36.000 10.56 0.00 0.00 3.67
4637 6178 4.391155 ACAAACATTTGGCTCCGTTACTA 58.609 39.130 9.09 0.00 42.34 1.82
4638 6179 4.454504 ACAAACATTTGGCTCCGTTACTAG 59.545 41.667 9.09 0.00 42.34 2.57
4639 6180 3.975168 ACATTTGGCTCCGTTACTAGT 57.025 42.857 0.00 0.00 0.00 2.57
4640 6181 3.858247 ACATTTGGCTCCGTTACTAGTC 58.142 45.455 0.00 0.00 0.00 2.59
4641 6182 3.195661 CATTTGGCTCCGTTACTAGTCC 58.804 50.000 0.00 0.00 0.00 3.85
4678 6219 4.066646 TGTCCTGTGACGAGAATTTCAA 57.933 40.909 0.00 0.00 44.86 2.69
4723 6284 1.955778 CCTGCAAGTGTTTGGATGTGA 59.044 47.619 0.00 0.00 33.95 3.58
4737 6298 5.497464 TGGATGTGACTCAGAATAAACCA 57.503 39.130 0.00 0.00 0.00 3.67
4740 6301 6.375174 TGGATGTGACTCAGAATAAACCAATG 59.625 38.462 0.00 0.00 0.00 2.82
4741 6302 6.599244 GGATGTGACTCAGAATAAACCAATGA 59.401 38.462 0.00 0.00 0.00 2.57
4742 6303 6.801539 TGTGACTCAGAATAAACCAATGAC 57.198 37.500 0.00 0.00 0.00 3.06
4743 6304 6.295249 TGTGACTCAGAATAAACCAATGACA 58.705 36.000 0.00 0.00 0.00 3.58
4744 6305 6.204688 TGTGACTCAGAATAAACCAATGACAC 59.795 38.462 0.00 0.00 0.00 3.67
4745 6306 5.705441 TGACTCAGAATAAACCAATGACACC 59.295 40.000 0.00 0.00 0.00 4.16
4746 6307 5.630121 ACTCAGAATAAACCAATGACACCA 58.370 37.500 0.00 0.00 0.00 4.17
4747 6308 6.248433 ACTCAGAATAAACCAATGACACCAT 58.752 36.000 0.00 0.00 33.66 3.55
4748 6309 6.151648 ACTCAGAATAAACCAATGACACCATG 59.848 38.462 0.00 0.00 32.36 3.66
4749 6310 5.104374 CAGAATAAACCAATGACACCATGC 58.896 41.667 0.00 0.00 32.36 4.06
4750 6311 3.781079 ATAAACCAATGACACCATGCG 57.219 42.857 0.00 0.00 32.36 4.73
4751 6312 1.614996 AAACCAATGACACCATGCGA 58.385 45.000 0.00 0.00 32.36 5.10
4752 6313 1.614996 AACCAATGACACCATGCGAA 58.385 45.000 0.00 0.00 32.36 4.70
4753 6314 1.167851 ACCAATGACACCATGCGAAG 58.832 50.000 0.00 0.00 32.36 3.79
4754 6315 0.452987 CCAATGACACCATGCGAAGG 59.547 55.000 0.00 0.00 32.36 3.46
4755 6316 1.452110 CAATGACACCATGCGAAGGA 58.548 50.000 0.00 0.00 32.36 3.36
4756 6317 1.131126 CAATGACACCATGCGAAGGAC 59.869 52.381 0.00 0.00 32.36 3.85
4757 6318 0.324614 ATGACACCATGCGAAGGACA 59.675 50.000 0.00 0.00 0.00 4.02
4758 6319 0.324614 TGACACCATGCGAAGGACAT 59.675 50.000 0.00 0.00 0.00 3.06
4759 6320 0.729116 GACACCATGCGAAGGACATG 59.271 55.000 0.00 0.00 43.67 3.21
4762 6323 3.113745 CATGCGAAGGACATGGCC 58.886 61.111 10.65 10.65 40.99 5.36
4763 6324 2.514592 ATGCGAAGGACATGGCCG 60.515 61.111 13.29 0.74 0.00 6.13
4764 6325 4.776322 TGCGAAGGACATGGCCGG 62.776 66.667 13.29 6.98 0.00 6.13
4765 6326 4.778143 GCGAAGGACATGGCCGGT 62.778 66.667 13.29 3.74 0.00 5.28
4766 6327 2.819595 CGAAGGACATGGCCGGTG 60.820 66.667 13.29 1.11 0.00 4.94
4767 6328 2.438434 GAAGGACATGGCCGGTGG 60.438 66.667 13.29 0.00 0.00 4.61
4768 6329 2.933287 AAGGACATGGCCGGTGGA 60.933 61.111 13.29 0.00 0.00 4.02
4769 6330 2.876368 GAAGGACATGGCCGGTGGAG 62.876 65.000 13.29 0.00 0.00 3.86
4770 6331 3.717294 GGACATGGCCGGTGGAGT 61.717 66.667 0.00 0.00 0.00 3.85
4771 6332 2.436646 GACATGGCCGGTGGAGTG 60.437 66.667 1.90 0.00 0.00 3.51
4772 6333 2.927856 ACATGGCCGGTGGAGTGA 60.928 61.111 1.90 0.00 0.00 3.41
4773 6334 2.124983 CATGGCCGGTGGAGTGAG 60.125 66.667 1.90 0.00 0.00 3.51
4774 6335 2.607750 ATGGCCGGTGGAGTGAGT 60.608 61.111 1.90 0.00 0.00 3.41
4775 6336 2.959484 ATGGCCGGTGGAGTGAGTG 61.959 63.158 1.90 0.00 0.00 3.51
4778 6339 4.742201 CCGGTGGAGTGAGTGCCG 62.742 72.222 0.00 0.00 41.82 5.69
4779 6340 4.742201 CGGTGGAGTGAGTGCCGG 62.742 72.222 0.00 0.00 38.86 6.13
4780 6341 3.311110 GGTGGAGTGAGTGCCGGA 61.311 66.667 5.05 0.00 0.00 5.14
4781 6342 2.048127 GTGGAGTGAGTGCCGGAC 60.048 66.667 5.05 0.00 0.00 4.79
4782 6343 3.311110 TGGAGTGAGTGCCGGACC 61.311 66.667 5.05 0.00 0.00 4.46
4783 6344 4.436998 GGAGTGAGTGCCGGACCG 62.437 72.222 5.05 6.99 0.00 4.79
4812 6373 2.356313 CGGCGAGCACTGTTCAGT 60.356 61.111 0.00 0.00 0.00 3.41
4813 6374 2.375766 CGGCGAGCACTGTTCAGTC 61.376 63.158 0.00 0.00 0.00 3.51
4814 6375 2.375766 GGCGAGCACTGTTCAGTCG 61.376 63.158 2.22 5.50 0.00 4.18
4815 6376 1.661821 GCGAGCACTGTTCAGTCGT 60.662 57.895 2.22 0.00 33.19 4.34
4816 6377 1.215655 GCGAGCACTGTTCAGTCGTT 61.216 55.000 2.22 0.00 33.19 3.85
4817 6378 1.929038 GCGAGCACTGTTCAGTCGTTA 60.929 52.381 2.22 0.00 33.19 3.18
4818 6379 1.714460 CGAGCACTGTTCAGTCGTTAC 59.286 52.381 2.22 0.00 0.00 2.50
4819 6380 2.059541 GAGCACTGTTCAGTCGTTACC 58.940 52.381 2.22 0.00 0.00 2.85
4820 6381 1.145803 GCACTGTTCAGTCGTTACCC 58.854 55.000 2.22 0.00 0.00 3.69
4821 6382 1.539496 GCACTGTTCAGTCGTTACCCA 60.539 52.381 2.22 0.00 0.00 4.51
4822 6383 2.870435 GCACTGTTCAGTCGTTACCCAT 60.870 50.000 2.22 0.00 0.00 4.00
4823 6384 2.993899 CACTGTTCAGTCGTTACCCATC 59.006 50.000 2.22 0.00 0.00 3.51
4824 6385 2.631062 ACTGTTCAGTCGTTACCCATCA 59.369 45.455 0.00 0.00 0.00 3.07
4825 6386 3.260884 ACTGTTCAGTCGTTACCCATCAT 59.739 43.478 0.00 0.00 0.00 2.45
4826 6387 4.253685 CTGTTCAGTCGTTACCCATCATT 58.746 43.478 0.00 0.00 0.00 2.57
4827 6388 4.647611 TGTTCAGTCGTTACCCATCATTT 58.352 39.130 0.00 0.00 0.00 2.32
4828 6389 5.067273 TGTTCAGTCGTTACCCATCATTTT 58.933 37.500 0.00 0.00 0.00 1.82
4829 6390 5.533154 TGTTCAGTCGTTACCCATCATTTTT 59.467 36.000 0.00 0.00 0.00 1.94
4852 6413 4.594123 TTTGGGTTAAAGCAAGTTAGGC 57.406 40.909 0.00 0.00 0.00 3.93
4853 6414 3.231207 TGGGTTAAAGCAAGTTAGGCA 57.769 42.857 0.00 0.00 0.00 4.75
4854 6415 3.773560 TGGGTTAAAGCAAGTTAGGCAT 58.226 40.909 0.00 0.00 0.00 4.40
4855 6416 4.156477 TGGGTTAAAGCAAGTTAGGCATT 58.844 39.130 0.00 0.00 0.00 3.56
4856 6417 4.591072 TGGGTTAAAGCAAGTTAGGCATTT 59.409 37.500 0.00 0.00 0.00 2.32
4857 6418 5.168569 GGGTTAAAGCAAGTTAGGCATTTC 58.831 41.667 0.00 0.00 0.00 2.17
4858 6419 4.857037 GGTTAAAGCAAGTTAGGCATTTCG 59.143 41.667 0.00 0.00 0.00 3.46
4859 6420 2.636768 AAGCAAGTTAGGCATTTCGC 57.363 45.000 0.00 0.00 41.28 4.70
4860 6421 1.826385 AGCAAGTTAGGCATTTCGCT 58.174 45.000 0.00 0.00 41.91 4.93
4861 6422 1.740025 AGCAAGTTAGGCATTTCGCTC 59.260 47.619 0.00 0.00 41.91 5.03
4862 6423 1.468520 GCAAGTTAGGCATTTCGCTCA 59.531 47.619 0.00 0.00 41.91 4.26
4863 6424 2.476854 GCAAGTTAGGCATTTCGCTCAG 60.477 50.000 0.00 0.00 41.91 3.35
4864 6425 2.744202 CAAGTTAGGCATTTCGCTCAGT 59.256 45.455 0.00 0.00 41.91 3.41
4865 6426 3.887621 AGTTAGGCATTTCGCTCAGTA 57.112 42.857 0.00 0.00 41.91 2.74
4866 6427 3.522553 AGTTAGGCATTTCGCTCAGTAC 58.477 45.455 0.00 0.00 41.91 2.73
4867 6428 3.056107 AGTTAGGCATTTCGCTCAGTACA 60.056 43.478 0.00 0.00 41.91 2.90
4868 6429 2.472695 AGGCATTTCGCTCAGTACAA 57.527 45.000 0.00 0.00 41.91 2.41
4869 6430 2.076863 AGGCATTTCGCTCAGTACAAC 58.923 47.619 0.00 0.00 41.91 3.32
4870 6431 2.076863 GGCATTTCGCTCAGTACAACT 58.923 47.619 0.00 0.00 41.91 3.16
4871 6432 3.056107 AGGCATTTCGCTCAGTACAACTA 60.056 43.478 0.00 0.00 41.91 2.24
4872 6433 3.871594 GGCATTTCGCTCAGTACAACTAT 59.128 43.478 0.00 0.00 41.91 2.12
4873 6434 4.260375 GGCATTTCGCTCAGTACAACTATG 60.260 45.833 0.00 0.00 41.91 2.23
4874 6435 4.260375 GCATTTCGCTCAGTACAACTATGG 60.260 45.833 0.00 0.00 37.77 2.74
4875 6436 2.579207 TCGCTCAGTACAACTATGGC 57.421 50.000 0.00 0.00 0.00 4.40
4876 6437 1.822371 TCGCTCAGTACAACTATGGCA 59.178 47.619 0.00 0.00 0.00 4.92
4877 6438 2.232696 TCGCTCAGTACAACTATGGCAA 59.767 45.455 0.00 0.00 0.00 4.52
4878 6439 2.348666 CGCTCAGTACAACTATGGCAAC 59.651 50.000 0.00 0.00 0.00 4.17
4879 6440 2.348666 GCTCAGTACAACTATGGCAACG 59.651 50.000 0.00 0.00 42.51 4.10
4880 6441 3.845178 CTCAGTACAACTATGGCAACGA 58.155 45.455 0.00 0.00 42.51 3.85
4881 6442 3.581755 TCAGTACAACTATGGCAACGAC 58.418 45.455 0.00 0.00 42.51 4.34
4882 6443 2.671396 CAGTACAACTATGGCAACGACC 59.329 50.000 0.00 0.00 42.51 4.79
4883 6444 2.300723 AGTACAACTATGGCAACGACCA 59.699 45.455 0.00 0.00 45.82 4.02
4884 6445 2.264005 ACAACTATGGCAACGACCAA 57.736 45.000 0.00 0.00 44.65 3.67
4885 6446 2.577700 ACAACTATGGCAACGACCAAA 58.422 42.857 0.00 0.00 44.65 3.28
4886 6447 2.952978 ACAACTATGGCAACGACCAAAA 59.047 40.909 0.00 0.00 44.65 2.44
4887 6448 3.381908 ACAACTATGGCAACGACCAAAAA 59.618 39.130 0.00 0.00 44.65 1.94
4888 6449 3.915437 ACTATGGCAACGACCAAAAAG 57.085 42.857 0.00 0.00 44.65 2.27
4889 6450 3.482436 ACTATGGCAACGACCAAAAAGA 58.518 40.909 0.00 0.00 44.65 2.52
4890 6451 4.079253 ACTATGGCAACGACCAAAAAGAT 58.921 39.130 0.00 0.00 44.65 2.40
4891 6452 5.250200 ACTATGGCAACGACCAAAAAGATA 58.750 37.500 0.00 0.00 44.65 1.98
4892 6453 4.701956 ATGGCAACGACCAAAAAGATAG 57.298 40.909 0.00 0.00 44.65 2.08
4893 6454 2.817258 TGGCAACGACCAAAAAGATAGG 59.183 45.455 0.00 0.00 36.55 2.57
4894 6455 3.078837 GGCAACGACCAAAAAGATAGGA 58.921 45.455 0.00 0.00 0.00 2.94
4895 6456 3.694566 GGCAACGACCAAAAAGATAGGAT 59.305 43.478 0.00 0.00 0.00 3.24
4896 6457 4.201920 GGCAACGACCAAAAAGATAGGATC 60.202 45.833 0.00 0.00 0.00 3.36
4897 6458 4.636206 GCAACGACCAAAAAGATAGGATCT 59.364 41.667 0.00 0.00 42.61 2.75
4898 6459 5.447818 GCAACGACCAAAAAGATAGGATCTG 60.448 44.000 0.00 0.00 40.13 2.90
4899 6460 4.192317 ACGACCAAAAAGATAGGATCTGC 58.808 43.478 0.00 0.00 40.13 4.26
4900 6461 4.080863 ACGACCAAAAAGATAGGATCTGCT 60.081 41.667 0.00 0.00 40.13 4.24
4901 6462 4.509600 CGACCAAAAAGATAGGATCTGCTC 59.490 45.833 0.00 0.00 40.13 4.26
4902 6463 4.786425 ACCAAAAAGATAGGATCTGCTCC 58.214 43.478 0.00 0.00 45.33 4.70
4909 6470 4.993307 GGATCTGCTCCATTGGCA 57.007 55.556 0.00 0.00 44.26 4.92
4910 6471 3.196040 GGATCTGCTCCATTGGCAA 57.804 52.632 0.68 0.68 44.26 4.52
4911 6472 0.743097 GGATCTGCTCCATTGGCAAC 59.257 55.000 0.00 0.00 44.26 4.17
4912 6473 0.379669 GATCTGCTCCATTGGCAACG 59.620 55.000 0.00 0.00 39.30 4.10
4913 6474 0.035152 ATCTGCTCCATTGGCAACGA 60.035 50.000 0.00 0.00 39.30 3.85
4914 6475 0.955428 TCTGCTCCATTGGCAACGAC 60.955 55.000 0.00 0.00 39.30 4.34
4915 6476 1.926511 CTGCTCCATTGGCAACGACC 61.927 60.000 0.00 0.00 39.30 4.79
4916 6477 1.971167 GCTCCATTGGCAACGACCA 60.971 57.895 0.00 0.00 42.51 4.02
4917 6478 1.315257 GCTCCATTGGCAACGACCAT 61.315 55.000 0.00 0.00 40.13 3.55
4918 6479 2.016604 GCTCCATTGGCAACGACCATA 61.017 52.381 0.00 0.00 40.13 2.74
4919 6480 1.942657 CTCCATTGGCAACGACCATAG 59.057 52.381 0.00 0.00 40.13 2.23
4920 6481 1.557371 TCCATTGGCAACGACCATAGA 59.443 47.619 0.00 0.00 40.13 1.98
4921 6482 2.172505 TCCATTGGCAACGACCATAGAT 59.827 45.455 0.00 0.00 40.13 1.98
4922 6483 2.951642 CCATTGGCAACGACCATAGATT 59.048 45.455 0.00 0.00 40.13 2.40
4923 6484 3.381272 CCATTGGCAACGACCATAGATTT 59.619 43.478 0.00 0.00 40.13 2.17
4924 6485 4.142182 CCATTGGCAACGACCATAGATTTT 60.142 41.667 0.00 0.00 40.13 1.82
4925 6486 5.410067 CATTGGCAACGACCATAGATTTTT 58.590 37.500 0.00 0.00 40.13 1.94
4952 6513 9.541884 TTTTGAGGAAAAAGGCCTTATATTACT 57.458 29.630 20.84 19.39 35.44 2.24
4953 6514 8.747538 TTGAGGAAAAAGGCCTTATATTACTC 57.252 34.615 28.08 28.08 35.44 2.59
4954 6515 7.867921 TGAGGAAAAAGGCCTTATATTACTCA 58.132 34.615 30.96 30.96 35.44 3.41
4955 6516 8.333235 TGAGGAAAAAGGCCTTATATTACTCAA 58.667 33.333 31.76 22.21 35.44 3.02
4956 6517 9.185680 GAGGAAAAAGGCCTTATATTACTCAAA 57.814 33.333 28.98 0.00 35.44 2.69
4957 6518 9.190317 AGGAAAAAGGCCTTATATTACTCAAAG 57.810 33.333 20.84 0.00 29.44 2.77
4958 6519 8.967918 GGAAAAAGGCCTTATATTACTCAAAGT 58.032 33.333 20.84 0.00 0.00 2.66
4960 6521 8.521170 AAAAGGCCTTATATTACTCAAAGTCC 57.479 34.615 20.84 0.00 0.00 3.85
4961 6522 6.824958 AGGCCTTATATTACTCAAAGTCCA 57.175 37.500 0.00 0.00 0.00 4.02
4962 6523 6.592870 AGGCCTTATATTACTCAAAGTCCAC 58.407 40.000 0.00 0.00 0.00 4.02
4963 6524 6.157994 AGGCCTTATATTACTCAAAGTCCACA 59.842 38.462 0.00 0.00 0.00 4.17
4964 6525 6.826741 GGCCTTATATTACTCAAAGTCCACAA 59.173 38.462 0.00 0.00 0.00 3.33
4965 6526 7.502561 GGCCTTATATTACTCAAAGTCCACAAT 59.497 37.037 0.00 0.00 0.00 2.71
4966 6527 8.345565 GCCTTATATTACTCAAAGTCCACAATG 58.654 37.037 0.00 0.00 0.00 2.82
4967 6528 9.396022 CCTTATATTACTCAAAGTCCACAATGT 57.604 33.333 0.00 0.00 0.00 2.71
4985 6546 6.035368 CAATGTGGAATACAAATTGGGTCA 57.965 37.500 0.24 0.00 46.60 4.02
4986 6547 6.642430 CAATGTGGAATACAAATTGGGTCAT 58.358 36.000 0.24 0.00 46.60 3.06
4987 6548 6.872585 ATGTGGAATACAAATTGGGTCATT 57.127 33.333 0.00 0.00 43.77 2.57
4988 6549 7.969690 ATGTGGAATACAAATTGGGTCATTA 57.030 32.000 0.00 0.00 43.77 1.90
4989 6550 7.782897 TGTGGAATACAAATTGGGTCATTAA 57.217 32.000 0.00 0.00 36.06 1.40
4990 6551 7.607250 TGTGGAATACAAATTGGGTCATTAAC 58.393 34.615 0.00 0.00 36.06 2.01
4991 6552 7.453126 TGTGGAATACAAATTGGGTCATTAACT 59.547 33.333 0.00 0.00 36.06 2.24
4992 6553 7.973944 GTGGAATACAAATTGGGTCATTAACTC 59.026 37.037 0.00 0.00 0.00 3.01
4993 6554 7.671819 TGGAATACAAATTGGGTCATTAACTCA 59.328 33.333 0.00 0.00 36.23 3.41
4994 6555 8.695456 GGAATACAAATTGGGTCATTAACTCAT 58.305 33.333 0.00 0.00 38.46 2.90
5004 6565 9.967451 TTGGGTCATTAACTCATAATAAAGTGA 57.033 29.630 0.00 0.00 38.46 3.41
5005 6566 9.391006 TGGGTCATTAACTCATAATAAAGTGAC 57.609 33.333 0.00 0.00 31.70 3.67
5006 6567 8.548721 GGGTCATTAACTCATAATAAAGTGACG 58.451 37.037 0.00 0.00 32.78 4.35
5007 6568 9.309516 GGTCATTAACTCATAATAAAGTGACGA 57.690 33.333 0.00 0.00 32.78 4.20
5009 6570 9.031360 TCATTAACTCATAATAAAGTGACGAGC 57.969 33.333 0.00 0.00 32.84 5.03
5010 6571 8.817100 CATTAACTCATAATAAAGTGACGAGCA 58.183 33.333 0.00 0.00 32.84 4.26
5011 6572 6.893958 AACTCATAATAAAGTGACGAGCAG 57.106 37.500 0.00 0.00 0.00 4.24
5012 6573 5.352284 ACTCATAATAAAGTGACGAGCAGG 58.648 41.667 0.00 0.00 0.00 4.85
5013 6574 5.105310 ACTCATAATAAAGTGACGAGCAGGT 60.105 40.000 0.00 0.00 0.00 4.00
5014 6575 5.730550 TCATAATAAAGTGACGAGCAGGTT 58.269 37.500 0.00 0.00 0.00 3.50
5015 6576 6.170506 TCATAATAAAGTGACGAGCAGGTTT 58.829 36.000 0.00 0.00 0.00 3.27
5016 6577 6.653320 TCATAATAAAGTGACGAGCAGGTTTT 59.347 34.615 0.00 0.00 0.00 2.43
5017 6578 5.358298 AATAAAGTGACGAGCAGGTTTTC 57.642 39.130 0.00 0.00 0.00 2.29
5018 6579 1.594331 AAGTGACGAGCAGGTTTTCC 58.406 50.000 0.00 0.00 41.05 3.13
5019 6580 0.250338 AGTGACGAGCAGGTTTTCCC 60.250 55.000 0.00 0.00 41.86 3.97
5021 6582 0.472471 TGACGAGCAGGTTTTCCCTT 59.528 50.000 0.00 0.00 42.73 3.95
5022 6583 1.157585 GACGAGCAGGTTTTCCCTTC 58.842 55.000 0.00 0.00 42.73 3.46
5023 6584 0.472471 ACGAGCAGGTTTTCCCTTCA 59.528 50.000 0.00 0.00 42.73 3.02
5024 6585 1.133915 ACGAGCAGGTTTTCCCTTCAA 60.134 47.619 0.00 0.00 42.73 2.69
5025 6586 1.953686 CGAGCAGGTTTTCCCTTCAAA 59.046 47.619 0.00 0.00 42.73 2.69
5026 6587 2.360801 CGAGCAGGTTTTCCCTTCAAAA 59.639 45.455 0.00 0.00 42.73 2.44
5027 6588 3.181480 CGAGCAGGTTTTCCCTTCAAAAA 60.181 43.478 0.00 0.00 42.73 1.94
5047 6608 0.387565 AAAAACCCCACACATGACGC 59.612 50.000 0.00 0.00 0.00 5.19
5048 6609 1.460273 AAAACCCCACACATGACGCC 61.460 55.000 0.00 0.00 0.00 5.68
5049 6610 2.351924 AAACCCCACACATGACGCCT 62.352 55.000 0.00 0.00 0.00 5.52
5050 6611 2.034066 CCCCACACATGACGCCTT 59.966 61.111 0.00 0.00 0.00 4.35
5051 6612 2.334946 CCCCACACATGACGCCTTG 61.335 63.158 0.00 0.00 0.00 3.61
5052 6613 2.334946 CCCACACATGACGCCTTGG 61.335 63.158 0.00 0.00 0.00 3.61
5053 6614 1.302431 CCACACATGACGCCTTGGA 60.302 57.895 0.00 0.00 0.00 3.53
5054 6615 0.888736 CCACACATGACGCCTTGGAA 60.889 55.000 0.00 0.00 0.00 3.53
5055 6616 0.238289 CACACATGACGCCTTGGAAC 59.762 55.000 0.00 0.00 0.00 3.62
5056 6617 0.108585 ACACATGACGCCTTGGAACT 59.891 50.000 0.00 0.00 0.00 3.01
5057 6618 1.346395 ACACATGACGCCTTGGAACTA 59.654 47.619 0.00 0.00 0.00 2.24
5058 6619 2.224426 ACACATGACGCCTTGGAACTAA 60.224 45.455 0.00 0.00 0.00 2.24
5059 6620 2.811431 CACATGACGCCTTGGAACTAAA 59.189 45.455 0.00 0.00 0.00 1.85
5060 6621 3.074412 ACATGACGCCTTGGAACTAAAG 58.926 45.455 0.00 0.00 0.00 1.85
5061 6622 3.244422 ACATGACGCCTTGGAACTAAAGA 60.244 43.478 0.00 0.00 0.00 2.52
5062 6623 3.695830 TGACGCCTTGGAACTAAAGAT 57.304 42.857 0.00 0.00 0.00 2.40
5063 6624 4.811969 TGACGCCTTGGAACTAAAGATA 57.188 40.909 0.00 0.00 0.00 1.98
5064 6625 5.155278 TGACGCCTTGGAACTAAAGATAA 57.845 39.130 0.00 0.00 0.00 1.75
5065 6626 5.741011 TGACGCCTTGGAACTAAAGATAAT 58.259 37.500 0.00 0.00 0.00 1.28
5066 6627 5.815740 TGACGCCTTGGAACTAAAGATAATC 59.184 40.000 0.00 0.00 0.00 1.75
5067 6628 4.809426 ACGCCTTGGAACTAAAGATAATCG 59.191 41.667 0.00 0.00 0.00 3.34
5068 6629 5.047847 CGCCTTGGAACTAAAGATAATCGA 58.952 41.667 0.00 0.00 0.00 3.59
5069 6630 5.050972 CGCCTTGGAACTAAAGATAATCGAC 60.051 44.000 0.00 0.00 0.00 4.20
5070 6631 5.815740 GCCTTGGAACTAAAGATAATCGACA 59.184 40.000 0.00 0.00 0.00 4.35
5071 6632 6.315393 GCCTTGGAACTAAAGATAATCGACAA 59.685 38.462 0.00 0.00 0.00 3.18
5072 6633 7.676572 GCCTTGGAACTAAAGATAATCGACAAC 60.677 40.741 0.00 0.00 0.00 3.32
5073 6634 6.880822 TGGAACTAAAGATAATCGACAACG 57.119 37.500 0.00 0.00 41.26 4.10
5074 6635 5.808540 TGGAACTAAAGATAATCGACAACGG 59.191 40.000 0.00 0.00 40.21 4.44
5075 6636 5.276726 GGAACTAAAGATAATCGACAACGGC 60.277 44.000 0.00 0.00 40.21 5.68
5076 6637 5.007385 ACTAAAGATAATCGACAACGGCT 57.993 39.130 0.00 0.00 40.21 5.52
5077 6638 6.140303 ACTAAAGATAATCGACAACGGCTA 57.860 37.500 0.00 0.00 40.21 3.93
5078 6639 5.975939 ACTAAAGATAATCGACAACGGCTAC 59.024 40.000 0.00 0.00 40.21 3.58
5079 6640 4.380841 AAGATAATCGACAACGGCTACA 57.619 40.909 0.00 0.00 40.21 2.74
5080 6641 4.380841 AGATAATCGACAACGGCTACAA 57.619 40.909 0.00 0.00 40.21 2.41
5081 6642 4.110482 AGATAATCGACAACGGCTACAAC 58.890 43.478 0.00 0.00 40.21 3.32
5082 6643 2.157834 AATCGACAACGGCTACAACA 57.842 45.000 0.00 0.00 40.21 3.33
5083 6644 2.380084 ATCGACAACGGCTACAACAT 57.620 45.000 0.00 0.00 40.21 2.71
5084 6645 3.513680 ATCGACAACGGCTACAACATA 57.486 42.857 0.00 0.00 40.21 2.29
5085 6646 2.871133 TCGACAACGGCTACAACATAG 58.129 47.619 0.00 0.00 40.21 2.23
5086 6647 2.488937 TCGACAACGGCTACAACATAGA 59.511 45.455 0.00 0.00 40.21 1.98
5087 6648 3.129813 TCGACAACGGCTACAACATAGAT 59.870 43.478 0.00 0.00 40.21 1.98
5088 6649 4.336153 TCGACAACGGCTACAACATAGATA 59.664 41.667 0.00 0.00 40.21 1.98
5089 6650 4.675565 CGACAACGGCTACAACATAGATAG 59.324 45.833 0.00 0.00 35.72 2.08
5090 6651 5.589192 GACAACGGCTACAACATAGATAGT 58.411 41.667 0.00 0.00 0.00 2.12
5091 6652 5.589192 ACAACGGCTACAACATAGATAGTC 58.411 41.667 0.00 0.00 0.00 2.59
5092 6653 4.485024 ACGGCTACAACATAGATAGTCG 57.515 45.455 3.18 3.18 46.71 4.18
5093 6654 4.132336 ACGGCTACAACATAGATAGTCGA 58.868 43.478 11.07 0.00 44.73 4.20
5094 6655 4.024218 ACGGCTACAACATAGATAGTCGAC 60.024 45.833 7.70 7.70 44.73 4.20
5095 6656 4.024302 CGGCTACAACATAGATAGTCGACA 60.024 45.833 19.50 4.13 44.73 4.35
5096 6657 5.505159 CGGCTACAACATAGATAGTCGACAA 60.505 44.000 19.50 0.00 44.73 3.18
5097 6658 5.686397 GGCTACAACATAGATAGTCGACAAC 59.314 44.000 19.50 8.36 0.00 3.32
5098 6659 5.395778 GCTACAACATAGATAGTCGACAACG 59.604 44.000 19.50 1.10 41.26 4.10
5099 6660 4.669318 ACAACATAGATAGTCGACAACGG 58.331 43.478 19.50 2.82 40.21 4.44
5100 6661 3.351020 ACATAGATAGTCGACAACGGC 57.649 47.619 19.50 2.11 45.02 5.68
5107 6668 2.889578 GTCGACAACGGCTACAACA 58.110 52.632 11.55 0.00 41.20 3.33
5108 6669 1.210870 GTCGACAACGGCTACAACAA 58.789 50.000 11.55 0.00 41.20 2.83
5109 6670 1.796459 GTCGACAACGGCTACAACAAT 59.204 47.619 11.55 0.00 41.20 2.71
5110 6671 2.988493 GTCGACAACGGCTACAACAATA 59.012 45.455 11.55 0.00 41.20 1.90
5111 6672 3.615496 GTCGACAACGGCTACAACAATAT 59.385 43.478 11.55 0.00 41.20 1.28
5112 6673 3.861113 TCGACAACGGCTACAACAATATC 59.139 43.478 0.00 0.00 40.21 1.63
5113 6674 3.615056 CGACAACGGCTACAACAATATCA 59.385 43.478 0.00 0.00 35.72 2.15
5114 6675 4.092237 CGACAACGGCTACAACAATATCAA 59.908 41.667 0.00 0.00 35.72 2.57
5115 6676 5.390040 CGACAACGGCTACAACAATATCAAA 60.390 40.000 0.00 0.00 35.72 2.69
5116 6677 6.509418 ACAACGGCTACAACAATATCAAAT 57.491 33.333 0.00 0.00 0.00 2.32
5117 6678 6.551736 ACAACGGCTACAACAATATCAAATC 58.448 36.000 0.00 0.00 0.00 2.17
5118 6679 5.751243 ACGGCTACAACAATATCAAATCC 57.249 39.130 0.00 0.00 0.00 3.01
5119 6680 4.578928 ACGGCTACAACAATATCAAATCCC 59.421 41.667 0.00 0.00 0.00 3.85
5120 6681 4.821805 CGGCTACAACAATATCAAATCCCT 59.178 41.667 0.00 0.00 0.00 4.20
5121 6682 5.049405 CGGCTACAACAATATCAAATCCCTC 60.049 44.000 0.00 0.00 0.00 4.30
5122 6683 5.827797 GGCTACAACAATATCAAATCCCTCA 59.172 40.000 0.00 0.00 0.00 3.86
5123 6684 6.321181 GGCTACAACAATATCAAATCCCTCAA 59.679 38.462 0.00 0.00 0.00 3.02
5124 6685 7.420800 GCTACAACAATATCAAATCCCTCAAG 58.579 38.462 0.00 0.00 0.00 3.02
5125 6686 6.212888 ACAACAATATCAAATCCCTCAAGC 57.787 37.500 0.00 0.00 0.00 4.01
5126 6687 5.163622 ACAACAATATCAAATCCCTCAAGCG 60.164 40.000 0.00 0.00 0.00 4.68
5127 6688 3.316308 ACAATATCAAATCCCTCAAGCGC 59.684 43.478 0.00 0.00 0.00 5.92
5128 6689 1.967319 TATCAAATCCCTCAAGCGCC 58.033 50.000 2.29 0.00 0.00 6.53
5129 6690 0.753111 ATCAAATCCCTCAAGCGCCC 60.753 55.000 2.29 0.00 0.00 6.13
5130 6691 2.438434 AAATCCCTCAAGCGCCCG 60.438 61.111 2.29 0.00 0.00 6.13
5131 6692 3.995506 AAATCCCTCAAGCGCCCGG 62.996 63.158 2.29 0.00 0.00 5.73
5136 6697 4.379243 CTCAAGCGCCCGGTCTGT 62.379 66.667 2.29 0.00 0.00 3.41
5137 6698 4.373116 TCAAGCGCCCGGTCTGTC 62.373 66.667 2.29 0.00 0.00 3.51
5144 6705 4.003788 CCCGGTCTGTCGCACCTT 62.004 66.667 0.00 0.00 0.00 3.50
5145 6706 2.432628 CCGGTCTGTCGCACCTTC 60.433 66.667 0.00 0.00 0.00 3.46
5146 6707 2.651361 CGGTCTGTCGCACCTTCT 59.349 61.111 0.00 0.00 0.00 2.85
5147 6708 1.444553 CGGTCTGTCGCACCTTCTC 60.445 63.158 0.00 0.00 0.00 2.87
5148 6709 1.666011 GGTCTGTCGCACCTTCTCA 59.334 57.895 0.00 0.00 0.00 3.27
5149 6710 0.389166 GGTCTGTCGCACCTTCTCAG 60.389 60.000 0.00 0.00 0.00 3.35
5151 6712 1.079543 CTGTCGCACCTTCTCAGGG 60.080 63.158 0.00 0.00 46.01 4.45
5152 6713 2.435059 GTCGCACCTTCTCAGGGC 60.435 66.667 0.00 0.00 46.01 5.19
5153 6714 2.922503 TCGCACCTTCTCAGGGCA 60.923 61.111 0.00 0.00 46.01 5.36
5154 6715 2.270205 CGCACCTTCTCAGGGCAT 59.730 61.111 0.00 0.00 46.01 4.40
5155 6716 2.110967 CGCACCTTCTCAGGGCATG 61.111 63.158 0.00 0.00 46.01 4.06
5156 6717 1.001641 GCACCTTCTCAGGGCATGT 60.002 57.895 0.00 0.00 46.01 3.21
5157 6718 0.253044 GCACCTTCTCAGGGCATGTA 59.747 55.000 0.00 0.00 46.01 2.29
5158 6719 2.014068 GCACCTTCTCAGGGCATGTAC 61.014 57.143 0.00 0.00 46.01 2.90
5159 6720 1.278985 CACCTTCTCAGGGCATGTACA 59.721 52.381 0.00 0.00 46.01 2.90
5160 6721 1.985159 ACCTTCTCAGGGCATGTACAA 59.015 47.619 0.00 0.00 46.01 2.41
5161 6722 2.578021 ACCTTCTCAGGGCATGTACAAT 59.422 45.455 0.00 0.00 46.01 2.71
5162 6723 2.947652 CCTTCTCAGGGCATGTACAATG 59.052 50.000 0.00 0.12 36.36 2.82
5163 6724 2.715749 TCTCAGGGCATGTACAATGG 57.284 50.000 0.00 0.00 0.00 3.16
5164 6725 1.915489 TCTCAGGGCATGTACAATGGT 59.085 47.619 0.00 0.00 0.00 3.55
5165 6726 2.308570 TCTCAGGGCATGTACAATGGTT 59.691 45.455 0.00 0.00 0.00 3.67
5166 6727 2.424601 CTCAGGGCATGTACAATGGTTG 59.575 50.000 0.00 0.00 0.00 3.77
5167 6728 2.040947 TCAGGGCATGTACAATGGTTGA 59.959 45.455 0.00 0.00 0.00 3.18
5168 6729 3.025978 CAGGGCATGTACAATGGTTGAT 58.974 45.455 0.00 0.00 0.00 2.57
5169 6730 4.080072 TCAGGGCATGTACAATGGTTGATA 60.080 41.667 0.00 0.00 0.00 2.15
5170 6731 4.644234 CAGGGCATGTACAATGGTTGATAA 59.356 41.667 0.00 0.00 0.00 1.75
5171 6732 4.889409 AGGGCATGTACAATGGTTGATAAG 59.111 41.667 0.00 0.00 0.00 1.73
5172 6733 4.887071 GGGCATGTACAATGGTTGATAAGA 59.113 41.667 0.00 0.00 0.00 2.10
5173 6734 5.536161 GGGCATGTACAATGGTTGATAAGAT 59.464 40.000 0.00 0.00 0.00 2.40
5174 6735 6.714810 GGGCATGTACAATGGTTGATAAGATA 59.285 38.462 0.00 0.00 0.00 1.98
5175 6736 7.094634 GGGCATGTACAATGGTTGATAAGATAG 60.095 40.741 0.00 0.00 0.00 2.08
5176 6737 7.445402 GGCATGTACAATGGTTGATAAGATAGT 59.555 37.037 0.00 0.00 0.00 2.12
5177 6738 8.499162 GCATGTACAATGGTTGATAAGATAGTC 58.501 37.037 0.00 0.00 0.00 2.59
5178 6739 9.770097 CATGTACAATGGTTGATAAGATAGTCT 57.230 33.333 0.00 0.00 0.00 3.24
5211 6772 8.587952 AGTTTTGCATGTAATTTAAAGGTGAC 57.412 30.769 0.00 0.00 0.00 3.67
5212 6773 8.200792 AGTTTTGCATGTAATTTAAAGGTGACA 58.799 29.630 0.00 0.00 0.00 3.58
5213 6774 8.821894 GTTTTGCATGTAATTTAAAGGTGACAA 58.178 29.630 0.00 0.00 0.00 3.18
5214 6775 7.938563 TTGCATGTAATTTAAAGGTGACAAC 57.061 32.000 0.00 0.00 0.00 3.32
5215 6776 6.146216 TGCATGTAATTTAAAGGTGACAACG 58.854 36.000 0.00 0.00 0.00 4.10
5216 6777 6.017026 TGCATGTAATTTAAAGGTGACAACGA 60.017 34.615 0.00 0.00 0.00 3.85
5217 6778 6.858993 GCATGTAATTTAAAGGTGACAACGAA 59.141 34.615 0.00 0.00 0.00 3.85
5218 6779 7.380065 GCATGTAATTTAAAGGTGACAACGAAA 59.620 33.333 0.00 0.00 0.00 3.46
5219 6780 9.239002 CATGTAATTTAAAGGTGACAACGAAAA 57.761 29.630 0.00 0.00 0.00 2.29
5220 6781 9.804758 ATGTAATTTAAAGGTGACAACGAAAAA 57.195 25.926 0.00 0.00 0.00 1.94
5221 6782 9.804758 TGTAATTTAAAGGTGACAACGAAAAAT 57.195 25.926 0.00 0.00 0.00 1.82
5223 6784 8.710835 AATTTAAAGGTGACAACGAAAAATGT 57.289 26.923 0.00 0.00 0.00 2.71
5224 6785 7.743520 TTTAAAGGTGACAACGAAAAATGTC 57.256 32.000 0.00 0.00 44.84 3.06
5225 6786 5.576447 AAAGGTGACAACGAAAAATGTCT 57.424 34.783 7.35 0.00 44.86 3.41
5226 6787 6.687081 AAAGGTGACAACGAAAAATGTCTA 57.313 33.333 7.35 0.00 44.86 2.59
5227 6788 6.877611 AAGGTGACAACGAAAAATGTCTAT 57.122 33.333 7.35 0.00 44.86 1.98
5228 6789 7.972832 AAGGTGACAACGAAAAATGTCTATA 57.027 32.000 7.35 0.00 44.86 1.31
5229 6790 7.972832 AGGTGACAACGAAAAATGTCTATAA 57.027 32.000 7.35 0.00 44.86 0.98
5230 6791 8.561738 AGGTGACAACGAAAAATGTCTATAAT 57.438 30.769 7.35 0.00 44.86 1.28
5231 6792 8.450964 AGGTGACAACGAAAAATGTCTATAATG 58.549 33.333 7.35 0.00 44.86 1.90
5232 6793 7.696453 GGTGACAACGAAAAATGTCTATAATGG 59.304 37.037 7.35 0.00 44.86 3.16
5233 6794 7.696453 GTGACAACGAAAAATGTCTATAATGGG 59.304 37.037 7.35 0.00 44.86 4.00
5234 6795 7.392113 TGACAACGAAAAATGTCTATAATGGGT 59.608 33.333 7.35 0.00 44.86 4.51
5235 6796 7.758495 ACAACGAAAAATGTCTATAATGGGTC 58.242 34.615 0.00 0.00 0.00 4.46
5236 6797 7.392113 ACAACGAAAAATGTCTATAATGGGTCA 59.608 33.333 0.00 0.00 0.00 4.02
5237 6798 8.405531 CAACGAAAAATGTCTATAATGGGTCAT 58.594 33.333 0.00 0.00 0.00 3.06
5238 6799 8.154649 ACGAAAAATGTCTATAATGGGTCATC 57.845 34.615 0.00 0.00 0.00 2.92
5239 6800 7.993183 ACGAAAAATGTCTATAATGGGTCATCT 59.007 33.333 0.00 0.00 0.00 2.90
5240 6801 8.499162 CGAAAAATGTCTATAATGGGTCATCTC 58.501 37.037 0.00 0.00 0.00 2.75
5241 6802 9.566432 GAAAAATGTCTATAATGGGTCATCTCT 57.434 33.333 0.00 0.00 0.00 3.10
5242 6803 9.927081 AAAAATGTCTATAATGGGTCATCTCTT 57.073 29.630 0.00 0.00 0.00 2.85
5245 6806 7.233389 TGTCTATAATGGGTCATCTCTTAGC 57.767 40.000 0.00 0.00 0.00 3.09
5246 6807 6.211584 TGTCTATAATGGGTCATCTCTTAGCC 59.788 42.308 0.00 0.00 0.00 3.93
5247 6808 6.439058 GTCTATAATGGGTCATCTCTTAGCCT 59.561 42.308 0.00 0.00 34.30 4.58
5248 6809 7.019388 TCTATAATGGGTCATCTCTTAGCCTT 58.981 38.462 0.00 0.00 34.30 4.35
5249 6810 8.177456 TCTATAATGGGTCATCTCTTAGCCTTA 58.823 37.037 0.00 0.00 34.30 2.69
5250 6811 7.821134 ATAATGGGTCATCTCTTAGCCTTAT 57.179 36.000 0.00 0.00 34.30 1.73
5251 6812 5.753721 ATGGGTCATCTCTTAGCCTTATC 57.246 43.478 0.00 0.00 34.30 1.75
5252 6813 4.820775 TGGGTCATCTCTTAGCCTTATCT 58.179 43.478 0.00 0.00 34.30 1.98
5253 6814 5.219739 TGGGTCATCTCTTAGCCTTATCTT 58.780 41.667 0.00 0.00 34.30 2.40
5254 6815 5.305644 TGGGTCATCTCTTAGCCTTATCTTC 59.694 44.000 0.00 0.00 34.30 2.87
5255 6816 5.305644 GGGTCATCTCTTAGCCTTATCTTCA 59.694 44.000 0.00 0.00 0.00 3.02
5256 6817 6.183361 GGGTCATCTCTTAGCCTTATCTTCAA 60.183 42.308 0.00 0.00 0.00 2.69
5257 6818 7.449247 GGTCATCTCTTAGCCTTATCTTCAAT 58.551 38.462 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.082140 TCCATACTACCATCACCGCT 57.918 50.000 0.00 0.00 0.00 5.52
2 3 2.902705 TTCCATACTACCATCACCGC 57.097 50.000 0.00 0.00 0.00 5.68
3 4 4.600692 TGATTCCATACTACCATCACCG 57.399 45.455 0.00 0.00 0.00 4.94
4 5 7.680730 AGTAATGATTCCATACTACCATCACC 58.319 38.462 0.00 0.00 31.59 4.02
31 32 3.000674 CGACGATTTCAGTATCTGCACAC 60.001 47.826 0.00 0.00 0.00 3.82
50 59 4.142513 ACAGAGGTAAAGATAACCGTCGAC 60.143 45.833 5.18 5.18 42.15 4.20
52 61 4.367386 ACAGAGGTAAAGATAACCGTCG 57.633 45.455 0.00 0.00 42.15 5.12
86 95 8.394877 AGCGAAATGAACACGATGAAATATTTA 58.605 29.630 0.00 0.00 0.00 1.40
110 119 8.555361 GGATAAAGAAACAGTCATCTAATCAGC 58.445 37.037 10.61 0.00 0.00 4.26
112 121 7.710907 CGGGATAAAGAAACAGTCATCTAATCA 59.289 37.037 10.61 0.00 0.00 2.57
128 137 5.475220 TGCAAACAAGAATTCGGGATAAAGA 59.525 36.000 0.00 0.00 0.00 2.52
129 138 5.708948 TGCAAACAAGAATTCGGGATAAAG 58.291 37.500 0.00 0.00 0.00 1.85
137 146 4.070581 ACGATCTGCAAACAAGAATTCG 57.929 40.909 0.00 0.00 0.00 3.34
304 313 7.262772 CAATGGATGTGCAGAAAATACTTCAT 58.737 34.615 0.00 0.00 0.00 2.57
331 340 8.421784 GTCTAATACCAGATAACACCATCAAGA 58.578 37.037 0.00 0.00 0.00 3.02
338 347 5.298347 GCCTGTCTAATACCAGATAACACC 58.702 45.833 0.00 0.00 0.00 4.16
343 352 4.487282 AGGGCCTGTCTAATACCAGATA 57.513 45.455 4.50 0.00 0.00 1.98
345 354 2.771943 CAAGGGCCTGTCTAATACCAGA 59.228 50.000 6.92 0.00 0.00 3.86
354 363 2.171003 GTTATTTGCAAGGGCCTGTCT 58.829 47.619 6.92 0.00 40.13 3.41
359 368 1.899142 TGAAGGTTATTTGCAAGGGCC 59.101 47.619 0.00 0.00 40.13 5.80
361 370 5.550290 ACAAATGAAGGTTATTTGCAAGGG 58.450 37.500 0.00 0.00 45.06 3.95
364 373 8.394121 GTTCAAACAAATGAAGGTTATTTGCAA 58.606 29.630 0.00 0.00 45.06 4.08
365 374 7.768120 AGTTCAAACAAATGAAGGTTATTTGCA 59.232 29.630 9.60 0.00 45.06 4.08
397 407 3.620488 TGATGCCATACTTCAGGGAAAC 58.380 45.455 0.00 0.00 0.00 2.78
471 481 9.116067 CATGATGAAATATTTTGCCAATTTCCT 57.884 29.630 1.43 0.00 38.34 3.36
536 547 1.091537 GCGCTACCTGGTTTATGCAA 58.908 50.000 3.84 0.00 0.00 4.08
538 549 1.379527 AAGCGCTACCTGGTTTATGC 58.620 50.000 12.05 4.77 0.00 3.14
615 627 7.956420 ACTTCTTACGACATTAAACACATCA 57.044 32.000 0.00 0.00 0.00 3.07
630 642 9.114965 CATGTATCTCCGTAATAACTTCTTACG 57.885 37.037 10.86 10.86 46.76 3.18
638 650 8.758633 AGCAATACATGTATCTCCGTAATAAC 57.241 34.615 18.52 0.00 0.00 1.89
645 657 6.162079 AGATGAAGCAATACATGTATCTCCG 58.838 40.000 18.52 9.00 0.00 4.63
662 674 6.492007 AGCAGTGTATGTTTTGAGATGAAG 57.508 37.500 0.00 0.00 0.00 3.02
666 678 7.201679 GCATAGAAGCAGTGTATGTTTTGAGAT 60.202 37.037 6.48 0.00 36.16 2.75
679 691 4.637534 ACATTGGTTAGCATAGAAGCAGTG 59.362 41.667 8.06 8.06 43.55 3.66
680 692 4.637534 CACATTGGTTAGCATAGAAGCAGT 59.362 41.667 0.00 0.00 35.84 4.40
681 693 4.036027 CCACATTGGTTAGCATAGAAGCAG 59.964 45.833 0.00 0.00 35.84 4.24
699 711 2.596346 TCACTCCAAACATTGCCACAT 58.404 42.857 0.00 0.00 0.00 3.21
707 719 5.013079 TCCAGTCTTGTATCACTCCAAACAT 59.987 40.000 0.00 0.00 0.00 2.71
735 747 9.143631 GTTCTGAATTAATACTGCAAAAGCAAT 57.856 29.630 0.00 0.00 0.00 3.56
776 788 2.610438 ATCCTGGGAACAAAGCATGT 57.390 45.000 0.00 0.00 46.82 3.21
919 932 7.717568 AGCTAGTGTAATCGTCTGACAAATAT 58.282 34.615 8.73 0.00 0.00 1.28
1194 1229 1.001181 CCAAGCAACCAAACATCCAGG 59.999 52.381 0.00 0.00 0.00 4.45
1209 1244 5.410924 GTTTCTGGAAATTCATACCCAAGC 58.589 41.667 0.00 0.00 32.36 4.01
1365 1410 1.825191 CAGGTCAATGCCATCCCCG 60.825 63.158 0.00 0.00 0.00 5.73
1414 1460 3.057174 ACTGGAGTGTCAGATTTCGACTC 60.057 47.826 0.00 0.00 38.11 3.36
1764 1850 1.276622 GGAAGACAGGAGGGTAGCAA 58.723 55.000 0.00 0.00 0.00 3.91
2556 3882 5.428253 TCATTTGAATTCCTAGAAGGACCG 58.572 41.667 2.27 0.00 45.78 4.79
2817 4251 8.973378 CGGAATGTAATCTCTTTCAAGTAGATC 58.027 37.037 0.00 0.00 0.00 2.75
3093 4573 2.584418 CGCTCATCAGCCCGTGAG 60.584 66.667 5.68 5.68 43.56 3.51
3126 4606 7.398618 TGGAAGAAAGCATGTTTTATATTCCCA 59.601 33.333 26.06 17.85 32.10 4.37
3177 4659 4.515028 ATGCAGATGGAAATGAAGGAGA 57.485 40.909 0.00 0.00 0.00 3.71
3198 4680 9.473007 TTCTTGTTTCCAACCATGATATGATTA 57.527 29.630 0.00 0.00 0.00 1.75
3237 4721 6.012658 TCCATCACTTCAACATAAAACTGC 57.987 37.500 0.00 0.00 0.00 4.40
3342 4826 5.954296 ACTCCATGTTGATTCTGTTCTTG 57.046 39.130 0.00 0.00 0.00 3.02
3438 4923 1.885887 CCGAGCTCTCTAAGAGGGATG 59.114 57.143 12.85 0.00 42.54 3.51
3468 4953 2.901249 GCTGAAGCTTTATACGGGACA 58.099 47.619 0.00 0.00 38.21 4.02
3783 5295 2.878406 ACCATCGTCAACAAACTTCTGG 59.122 45.455 0.00 0.00 0.00 3.86
3936 5448 3.634397 TCCTCATCTGATTCCACCAAC 57.366 47.619 0.00 0.00 0.00 3.77
3951 5463 3.966006 CAGAATCCTCTTCCTCATCCTCA 59.034 47.826 0.00 0.00 0.00 3.86
4062 5574 1.548269 CTCCTTTCTTCCTCGCTGTCT 59.452 52.381 0.00 0.00 0.00 3.41
4273 5788 2.899339 GCAGATTCAGAGGGCGCC 60.899 66.667 21.18 21.18 0.00 6.53
4455 5984 5.659048 ACGACAAACAAGTCTTGAGATTC 57.341 39.130 19.53 8.76 36.38 2.52
4456 5985 6.258160 CAAACGACAAACAAGTCTTGAGATT 58.742 36.000 19.53 8.14 36.38 2.40
4458 5987 4.094294 CCAAACGACAAACAAGTCTTGAGA 59.906 41.667 19.53 0.00 36.38 3.27
4459 5988 4.094294 TCCAAACGACAAACAAGTCTTGAG 59.906 41.667 19.53 10.51 36.38 3.02
4460 5989 4.004314 TCCAAACGACAAACAAGTCTTGA 58.996 39.130 19.53 0.00 36.38 3.02
4461 5990 4.349663 TCCAAACGACAAACAAGTCTTG 57.650 40.909 11.17 11.17 36.38 3.02
4462 5991 6.687081 TTATCCAAACGACAAACAAGTCTT 57.313 33.333 0.00 0.00 36.38 3.01
4464 5993 7.646130 TGAATTTATCCAAACGACAAACAAGTC 59.354 33.333 0.00 0.00 35.19 3.01
4465 5994 7.484975 TGAATTTATCCAAACGACAAACAAGT 58.515 30.769 0.00 0.00 0.00 3.16
4466 5995 7.922505 TGAATTTATCCAAACGACAAACAAG 57.077 32.000 0.00 0.00 0.00 3.16
4491 6025 0.109153 ACACAGCAGATGAACCAGCA 59.891 50.000 0.00 0.00 0.00 4.41
4517 6051 9.586150 GACAATCTACAATAAAGCATTACATCG 57.414 33.333 0.00 0.00 0.00 3.84
4549 6083 9.703892 TGTCAAATGAAATTTATACAAACTGGG 57.296 29.630 0.00 0.00 46.64 4.45
4593 6130 1.587043 CGCGGAGGAGAAGAGTCACA 61.587 60.000 0.00 0.00 0.00 3.58
4600 6137 2.167398 TTTGTCCCGCGGAGGAGAAG 62.167 60.000 30.73 8.04 45.00 2.85
4701 6262 2.101249 CACATCCAAACACTTGCAGGTT 59.899 45.455 0.00 0.00 0.00 3.50
4723 6284 5.630121 TGGTGTCATTGGTTTATTCTGAGT 58.370 37.500 0.00 0.00 0.00 3.41
4737 6298 1.271325 TGTCCTTCGCATGGTGTCATT 60.271 47.619 0.00 0.00 0.00 2.57
4740 6301 0.729116 CATGTCCTTCGCATGGTGTC 59.271 55.000 0.00 0.00 39.82 3.67
4741 6302 2.858622 CATGTCCTTCGCATGGTGT 58.141 52.632 0.00 0.00 39.82 4.16
4745 6306 2.827051 CGGCCATGTCCTTCGCATG 61.827 63.158 2.24 0.00 42.29 4.06
4746 6307 2.514592 CGGCCATGTCCTTCGCAT 60.515 61.111 2.24 0.00 0.00 4.73
4747 6308 4.776322 CCGGCCATGTCCTTCGCA 62.776 66.667 2.24 0.00 0.00 5.10
4748 6309 4.778143 ACCGGCCATGTCCTTCGC 62.778 66.667 0.00 0.00 0.00 4.70
4749 6310 2.819595 CACCGGCCATGTCCTTCG 60.820 66.667 0.00 0.00 0.00 3.79
4750 6311 2.438434 CCACCGGCCATGTCCTTC 60.438 66.667 0.00 0.00 0.00 3.46
4751 6312 2.933287 TCCACCGGCCATGTCCTT 60.933 61.111 0.00 0.00 0.00 3.36
4752 6313 3.402681 CTCCACCGGCCATGTCCT 61.403 66.667 0.00 0.00 0.00 3.85
4753 6314 3.717294 ACTCCACCGGCCATGTCC 61.717 66.667 0.00 0.00 0.00 4.02
4754 6315 2.436646 CACTCCACCGGCCATGTC 60.437 66.667 0.00 0.00 0.00 3.06
4755 6316 2.927856 TCACTCCACCGGCCATGT 60.928 61.111 0.00 0.00 0.00 3.21
4756 6317 2.124983 CTCACTCCACCGGCCATG 60.125 66.667 0.00 0.00 0.00 3.66
4757 6318 2.607750 ACTCACTCCACCGGCCAT 60.608 61.111 0.00 0.00 0.00 4.40
4758 6319 3.625897 CACTCACTCCACCGGCCA 61.626 66.667 0.00 0.00 0.00 5.36
4761 6322 4.742201 CGGCACTCACTCCACCGG 62.742 72.222 0.00 0.00 40.18 5.28
4762 6323 4.742201 CCGGCACTCACTCCACCG 62.742 72.222 0.00 0.00 43.44 4.94
4763 6324 3.311110 TCCGGCACTCACTCCACC 61.311 66.667 0.00 0.00 0.00 4.61
4764 6325 2.048127 GTCCGGCACTCACTCCAC 60.048 66.667 0.00 0.00 0.00 4.02
4765 6326 3.311110 GGTCCGGCACTCACTCCA 61.311 66.667 0.00 0.00 0.00 3.86
4766 6327 4.436998 CGGTCCGGCACTCACTCC 62.437 72.222 2.34 0.00 0.00 3.85
4767 6328 4.436998 CCGGTCCGGCACTCACTC 62.437 72.222 19.48 0.00 41.17 3.51
4771 6332 4.754667 GTTCCCGGTCCGGCACTC 62.755 72.222 25.88 10.65 46.86 3.51
4794 6355 3.782244 CTGAACAGTGCTCGCCGC 61.782 66.667 0.00 0.00 39.77 6.53
4795 6356 2.356313 ACTGAACAGTGCTCGCCG 60.356 61.111 6.67 0.00 40.75 6.46
4796 6357 2.375766 CGACTGAACAGTGCTCGCC 61.376 63.158 12.29 0.00 42.66 5.54
4797 6358 1.215655 AACGACTGAACAGTGCTCGC 61.216 55.000 12.29 0.00 42.66 5.03
4798 6359 1.714460 GTAACGACTGAACAGTGCTCG 59.286 52.381 12.29 11.61 42.66 5.03
4799 6360 2.059541 GGTAACGACTGAACAGTGCTC 58.940 52.381 12.29 0.00 42.66 4.26
4800 6361 1.270147 GGGTAACGACTGAACAGTGCT 60.270 52.381 12.29 0.00 42.66 4.40
4801 6362 1.145803 GGGTAACGACTGAACAGTGC 58.854 55.000 12.29 3.80 42.66 4.40
4802 6363 2.519377 TGGGTAACGACTGAACAGTG 57.481 50.000 12.29 7.36 42.66 3.66
4803 6364 2.631062 TGATGGGTAACGACTGAACAGT 59.369 45.455 7.20 7.20 45.84 3.55
4804 6365 3.313012 TGATGGGTAACGACTGAACAG 57.687 47.619 0.00 0.00 37.60 3.16
4805 6366 3.973206 ATGATGGGTAACGACTGAACA 57.027 42.857 0.00 0.00 37.60 3.18
4806 6367 5.622770 AAAATGATGGGTAACGACTGAAC 57.377 39.130 0.00 0.00 37.60 3.18
4829 6390 5.104900 TGCCTAACTTGCTTTAACCCAAAAA 60.105 36.000 0.00 0.00 0.00 1.94
4830 6391 4.406003 TGCCTAACTTGCTTTAACCCAAAA 59.594 37.500 0.00 0.00 0.00 2.44
4831 6392 3.961408 TGCCTAACTTGCTTTAACCCAAA 59.039 39.130 0.00 0.00 0.00 3.28
4832 6393 3.567397 TGCCTAACTTGCTTTAACCCAA 58.433 40.909 0.00 0.00 0.00 4.12
4833 6394 3.231207 TGCCTAACTTGCTTTAACCCA 57.769 42.857 0.00 0.00 0.00 4.51
4834 6395 4.801330 AATGCCTAACTTGCTTTAACCC 57.199 40.909 0.00 0.00 0.00 4.11
4835 6396 4.857037 CGAAATGCCTAACTTGCTTTAACC 59.143 41.667 0.00 0.00 0.00 2.85
4836 6397 4.323602 GCGAAATGCCTAACTTGCTTTAAC 59.676 41.667 0.00 0.00 37.76 2.01
4837 6398 4.481463 GCGAAATGCCTAACTTGCTTTAA 58.519 39.130 0.00 0.00 37.76 1.52
4838 6399 4.091453 GCGAAATGCCTAACTTGCTTTA 57.909 40.909 0.00 0.00 37.76 1.85
4839 6400 2.946564 GCGAAATGCCTAACTTGCTTT 58.053 42.857 0.00 0.00 37.76 3.51
4840 6401 2.636768 GCGAAATGCCTAACTTGCTT 57.363 45.000 0.00 0.00 37.76 3.91
4851 6412 4.260375 CCATAGTTGTACTGAGCGAAATGC 60.260 45.833 0.00 0.00 46.98 3.56
4852 6413 4.260375 GCCATAGTTGTACTGAGCGAAATG 60.260 45.833 0.00 0.00 0.00 2.32
4853 6414 3.871594 GCCATAGTTGTACTGAGCGAAAT 59.128 43.478 0.00 0.00 0.00 2.17
4854 6415 3.259064 GCCATAGTTGTACTGAGCGAAA 58.741 45.455 0.00 0.00 0.00 3.46
4855 6416 2.232696 TGCCATAGTTGTACTGAGCGAA 59.767 45.455 0.00 0.00 0.00 4.70
4856 6417 1.822371 TGCCATAGTTGTACTGAGCGA 59.178 47.619 0.00 0.00 0.00 4.93
4857 6418 2.293677 TGCCATAGTTGTACTGAGCG 57.706 50.000 0.00 0.00 0.00 5.03
4858 6419 2.348666 CGTTGCCATAGTTGTACTGAGC 59.651 50.000 0.00 0.00 0.00 4.26
4859 6420 3.612860 GTCGTTGCCATAGTTGTACTGAG 59.387 47.826 0.00 0.00 0.00 3.35
4860 6421 3.581755 GTCGTTGCCATAGTTGTACTGA 58.418 45.455 0.00 0.00 0.00 3.41
4861 6422 2.671396 GGTCGTTGCCATAGTTGTACTG 59.329 50.000 0.00 0.00 0.00 2.74
4862 6423 2.300723 TGGTCGTTGCCATAGTTGTACT 59.699 45.455 0.00 0.00 32.81 2.73
4863 6424 2.690786 TGGTCGTTGCCATAGTTGTAC 58.309 47.619 0.00 0.00 32.81 2.90
4864 6425 3.404224 TTGGTCGTTGCCATAGTTGTA 57.596 42.857 0.00 0.00 38.48 2.41
4865 6426 2.264005 TTGGTCGTTGCCATAGTTGT 57.736 45.000 0.00 0.00 38.48 3.32
4866 6427 3.634568 TTTTGGTCGTTGCCATAGTTG 57.365 42.857 0.00 0.00 38.48 3.16
4867 6428 3.886505 TCTTTTTGGTCGTTGCCATAGTT 59.113 39.130 0.00 0.00 38.48 2.24
4868 6429 3.482436 TCTTTTTGGTCGTTGCCATAGT 58.518 40.909 0.00 0.00 38.48 2.12
4869 6430 4.701956 ATCTTTTTGGTCGTTGCCATAG 57.298 40.909 0.00 0.00 38.48 2.23
4870 6431 4.638421 CCTATCTTTTTGGTCGTTGCCATA 59.362 41.667 0.00 0.00 38.48 2.74
4871 6432 3.443681 CCTATCTTTTTGGTCGTTGCCAT 59.556 43.478 0.00 0.00 38.48 4.40
4872 6433 2.817258 CCTATCTTTTTGGTCGTTGCCA 59.183 45.455 0.00 0.00 36.62 4.92
4873 6434 3.078837 TCCTATCTTTTTGGTCGTTGCC 58.921 45.455 0.00 0.00 0.00 4.52
4874 6435 4.636206 AGATCCTATCTTTTTGGTCGTTGC 59.364 41.667 0.00 0.00 35.76 4.17
4875 6436 5.447818 GCAGATCCTATCTTTTTGGTCGTTG 60.448 44.000 0.00 0.00 37.58 4.10
4876 6437 4.636206 GCAGATCCTATCTTTTTGGTCGTT 59.364 41.667 0.00 0.00 37.58 3.85
4877 6438 4.080863 AGCAGATCCTATCTTTTTGGTCGT 60.081 41.667 0.00 0.00 37.58 4.34
4878 6439 4.446371 AGCAGATCCTATCTTTTTGGTCG 58.554 43.478 0.00 0.00 37.58 4.79
4879 6440 4.819088 GGAGCAGATCCTATCTTTTTGGTC 59.181 45.833 0.00 0.00 45.64 4.02
4880 6441 4.786425 GGAGCAGATCCTATCTTTTTGGT 58.214 43.478 0.00 0.00 45.64 3.67
4893 6454 0.379669 CGTTGCCAATGGAGCAGATC 59.620 55.000 2.05 0.00 42.17 2.75
4894 6455 0.035152 TCGTTGCCAATGGAGCAGAT 60.035 50.000 2.05 0.00 42.17 2.90
4895 6456 0.955428 GTCGTTGCCAATGGAGCAGA 60.955 55.000 2.05 0.00 42.17 4.26
4896 6457 1.503542 GTCGTTGCCAATGGAGCAG 59.496 57.895 2.05 0.00 42.17 4.24
4897 6458 1.971167 GGTCGTTGCCAATGGAGCA 60.971 57.895 2.05 0.00 38.81 4.26
4898 6459 1.315257 ATGGTCGTTGCCAATGGAGC 61.315 55.000 2.05 0.69 42.48 4.70
4899 6460 1.942657 CTATGGTCGTTGCCAATGGAG 59.057 52.381 2.05 0.00 42.48 3.86
4900 6461 1.557371 TCTATGGTCGTTGCCAATGGA 59.443 47.619 2.05 0.00 42.48 3.41
4901 6462 2.036958 TCTATGGTCGTTGCCAATGG 57.963 50.000 0.00 0.00 42.48 3.16
4902 6463 4.637483 AAATCTATGGTCGTTGCCAATG 57.363 40.909 0.00 0.00 42.48 2.82
4903 6464 5.659440 AAAAATCTATGGTCGTTGCCAAT 57.341 34.783 0.89 0.00 42.48 3.16
4926 6487 9.541884 AGTAATATAAGGCCTTTTTCCTCAAAA 57.458 29.630 26.08 0.64 32.45 2.44
4927 6488 9.185680 GAGTAATATAAGGCCTTTTTCCTCAAA 57.814 33.333 26.08 1.53 32.45 2.69
4928 6489 8.333235 TGAGTAATATAAGGCCTTTTTCCTCAA 58.667 33.333 26.08 2.41 32.45 3.02
4929 6490 7.867921 TGAGTAATATAAGGCCTTTTTCCTCA 58.132 34.615 26.08 21.09 32.45 3.86
4930 6491 8.747538 TTGAGTAATATAAGGCCTTTTTCCTC 57.252 34.615 26.08 19.02 32.45 3.71
4931 6492 9.190317 CTTTGAGTAATATAAGGCCTTTTTCCT 57.810 33.333 26.08 11.42 34.90 3.36
4932 6493 8.967918 ACTTTGAGTAATATAAGGCCTTTTTCC 58.032 33.333 26.08 6.65 0.00 3.13
4934 6495 8.967918 GGACTTTGAGTAATATAAGGCCTTTTT 58.032 33.333 26.08 16.99 41.63 1.94
4935 6496 8.113462 TGGACTTTGAGTAATATAAGGCCTTTT 58.887 33.333 26.08 19.03 44.53 2.27
4936 6497 7.556635 GTGGACTTTGAGTAATATAAGGCCTTT 59.443 37.037 26.08 13.97 44.53 3.11
4937 6498 7.054751 GTGGACTTTGAGTAATATAAGGCCTT 58.945 38.462 24.18 24.18 44.53 4.35
4938 6499 6.157994 TGTGGACTTTGAGTAATATAAGGCCT 59.842 38.462 0.00 0.00 44.53 5.19
4939 6500 6.354130 TGTGGACTTTGAGTAATATAAGGCC 58.646 40.000 0.00 0.00 44.49 5.19
4940 6501 7.859325 TTGTGGACTTTGAGTAATATAAGGC 57.141 36.000 0.00 0.00 0.00 4.35
4941 6502 9.396022 ACATTGTGGACTTTGAGTAATATAAGG 57.604 33.333 0.00 0.00 0.00 2.69
4960 6521 5.792741 ACCCAATTTGTATTCCACATTGTG 58.207 37.500 9.92 9.92 38.85 3.33
4961 6522 5.541868 TGACCCAATTTGTATTCCACATTGT 59.458 36.000 0.00 0.00 38.85 2.71
4962 6523 6.035368 TGACCCAATTTGTATTCCACATTG 57.965 37.500 0.00 0.00 39.76 2.82
4963 6524 6.872585 ATGACCCAATTTGTATTCCACATT 57.127 33.333 0.00 0.00 36.90 2.71
4964 6525 6.872585 AATGACCCAATTTGTATTCCACAT 57.127 33.333 0.00 0.00 36.90 3.21
4965 6526 7.453126 AGTTAATGACCCAATTTGTATTCCACA 59.547 33.333 0.00 0.00 34.51 4.17
4966 6527 7.836842 AGTTAATGACCCAATTTGTATTCCAC 58.163 34.615 0.00 0.00 0.00 4.02
4967 6528 7.671819 TGAGTTAATGACCCAATTTGTATTCCA 59.328 33.333 0.00 0.00 0.00 3.53
4968 6529 8.062065 TGAGTTAATGACCCAATTTGTATTCC 57.938 34.615 0.00 0.00 0.00 3.01
4978 6539 9.967451 TCACTTTATTATGAGTTAATGACCCAA 57.033 29.630 0.00 0.00 32.66 4.12
4979 6540 9.391006 GTCACTTTATTATGAGTTAATGACCCA 57.609 33.333 0.00 0.00 32.66 4.51
4980 6541 8.548721 CGTCACTTTATTATGAGTTAATGACCC 58.451 37.037 0.00 0.00 32.66 4.46
4981 6542 9.309516 TCGTCACTTTATTATGAGTTAATGACC 57.690 33.333 0.00 0.00 32.66 4.02
4983 6544 9.031360 GCTCGTCACTTTATTATGAGTTAATGA 57.969 33.333 0.00 0.00 32.66 2.57
4984 6545 8.817100 TGCTCGTCACTTTATTATGAGTTAATG 58.183 33.333 0.00 0.00 32.66 1.90
4985 6546 8.942338 TGCTCGTCACTTTATTATGAGTTAAT 57.058 30.769 0.00 0.00 34.80 1.40
4986 6547 7.491372 CCTGCTCGTCACTTTATTATGAGTTAA 59.509 37.037 0.00 0.00 0.00 2.01
4987 6548 6.978659 CCTGCTCGTCACTTTATTATGAGTTA 59.021 38.462 0.00 0.00 0.00 2.24
4988 6549 5.812642 CCTGCTCGTCACTTTATTATGAGTT 59.187 40.000 0.00 0.00 0.00 3.01
4989 6550 5.105310 ACCTGCTCGTCACTTTATTATGAGT 60.105 40.000 0.00 0.00 0.00 3.41
4990 6551 5.352284 ACCTGCTCGTCACTTTATTATGAG 58.648 41.667 0.00 0.00 0.00 2.90
4991 6552 5.339008 ACCTGCTCGTCACTTTATTATGA 57.661 39.130 0.00 0.00 0.00 2.15
4992 6553 6.422776 AAACCTGCTCGTCACTTTATTATG 57.577 37.500 0.00 0.00 0.00 1.90
4993 6554 6.093633 GGAAAACCTGCTCGTCACTTTATTAT 59.906 38.462 0.00 0.00 0.00 1.28
4994 6555 5.410439 GGAAAACCTGCTCGTCACTTTATTA 59.590 40.000 0.00 0.00 0.00 0.98
4995 6556 4.215613 GGAAAACCTGCTCGTCACTTTATT 59.784 41.667 0.00 0.00 0.00 1.40
4996 6557 3.751698 GGAAAACCTGCTCGTCACTTTAT 59.248 43.478 0.00 0.00 0.00 1.40
4997 6558 3.135994 GGAAAACCTGCTCGTCACTTTA 58.864 45.455 0.00 0.00 0.00 1.85
4998 6559 1.947456 GGAAAACCTGCTCGTCACTTT 59.053 47.619 0.00 0.00 0.00 2.66
4999 6560 1.594331 GGAAAACCTGCTCGTCACTT 58.406 50.000 0.00 0.00 0.00 3.16
5000 6561 0.250338 GGGAAAACCTGCTCGTCACT 60.250 55.000 0.00 0.00 35.85 3.41
5001 6562 2.244946 GGGAAAACCTGCTCGTCAC 58.755 57.895 0.00 0.00 35.85 3.67
5002 6563 4.792087 GGGAAAACCTGCTCGTCA 57.208 55.556 0.00 0.00 35.85 4.35
5028 6589 0.387565 GCGTCATGTGTGGGGTTTTT 59.612 50.000 0.00 0.00 0.00 1.94
5029 6590 1.460273 GGCGTCATGTGTGGGGTTTT 61.460 55.000 0.00 0.00 0.00 2.43
5030 6591 1.901464 GGCGTCATGTGTGGGGTTT 60.901 57.895 0.00 0.00 0.00 3.27
5031 6592 2.282180 GGCGTCATGTGTGGGGTT 60.282 61.111 0.00 0.00 0.00 4.11
5032 6593 2.829384 AAGGCGTCATGTGTGGGGT 61.829 57.895 0.00 0.00 0.00 4.95
5033 6594 2.034066 AAGGCGTCATGTGTGGGG 59.966 61.111 0.00 0.00 0.00 4.96
5034 6595 2.334946 CCAAGGCGTCATGTGTGGG 61.335 63.158 0.00 0.00 0.00 4.61
5035 6596 0.888736 TTCCAAGGCGTCATGTGTGG 60.889 55.000 0.00 0.00 0.00 4.17
5036 6597 0.238289 GTTCCAAGGCGTCATGTGTG 59.762 55.000 0.00 0.00 0.00 3.82
5037 6598 0.108585 AGTTCCAAGGCGTCATGTGT 59.891 50.000 0.00 0.00 0.00 3.72
5038 6599 2.093306 TAGTTCCAAGGCGTCATGTG 57.907 50.000 0.00 0.00 0.00 3.21
5039 6600 2.851263 TTAGTTCCAAGGCGTCATGT 57.149 45.000 0.00 0.00 0.00 3.21
5040 6601 3.334691 TCTTTAGTTCCAAGGCGTCATG 58.665 45.455 0.00 0.00 0.00 3.07
5041 6602 3.695830 TCTTTAGTTCCAAGGCGTCAT 57.304 42.857 0.00 0.00 0.00 3.06
5042 6603 3.695830 ATCTTTAGTTCCAAGGCGTCA 57.304 42.857 0.00 0.00 0.00 4.35
5043 6604 5.050972 CGATTATCTTTAGTTCCAAGGCGTC 60.051 44.000 0.00 0.00 0.00 5.19
5044 6605 4.809426 CGATTATCTTTAGTTCCAAGGCGT 59.191 41.667 0.00 0.00 0.00 5.68
5045 6606 5.047847 TCGATTATCTTTAGTTCCAAGGCG 58.952 41.667 0.00 0.00 0.00 5.52
5046 6607 5.815740 TGTCGATTATCTTTAGTTCCAAGGC 59.184 40.000 0.00 0.00 0.00 4.35
5047 6608 7.464178 CGTTGTCGATTATCTTTAGTTCCAAGG 60.464 40.741 0.00 0.00 39.71 3.61
5048 6609 7.391786 CGTTGTCGATTATCTTTAGTTCCAAG 58.608 38.462 0.00 0.00 39.71 3.61
5049 6610 6.311935 CCGTTGTCGATTATCTTTAGTTCCAA 59.688 38.462 0.00 0.00 39.71 3.53
5050 6611 5.808540 CCGTTGTCGATTATCTTTAGTTCCA 59.191 40.000 0.00 0.00 39.71 3.53
5051 6612 5.276726 GCCGTTGTCGATTATCTTTAGTTCC 60.277 44.000 0.00 0.00 39.71 3.62
5052 6613 5.519206 AGCCGTTGTCGATTATCTTTAGTTC 59.481 40.000 0.00 0.00 39.71 3.01
5053 6614 5.416947 AGCCGTTGTCGATTATCTTTAGTT 58.583 37.500 0.00 0.00 39.71 2.24
5054 6615 5.007385 AGCCGTTGTCGATTATCTTTAGT 57.993 39.130 0.00 0.00 39.71 2.24
5055 6616 5.975344 TGTAGCCGTTGTCGATTATCTTTAG 59.025 40.000 0.00 0.00 39.71 1.85
5056 6617 5.893687 TGTAGCCGTTGTCGATTATCTTTA 58.106 37.500 0.00 0.00 39.71 1.85
5057 6618 4.751060 TGTAGCCGTTGTCGATTATCTTT 58.249 39.130 0.00 0.00 39.71 2.52
5058 6619 4.380841 TGTAGCCGTTGTCGATTATCTT 57.619 40.909 0.00 0.00 39.71 2.40
5059 6620 4.110482 GTTGTAGCCGTTGTCGATTATCT 58.890 43.478 0.00 0.00 39.71 1.98
5060 6621 3.861113 TGTTGTAGCCGTTGTCGATTATC 59.139 43.478 0.00 0.00 39.71 1.75
5061 6622 3.852286 TGTTGTAGCCGTTGTCGATTAT 58.148 40.909 0.00 0.00 39.71 1.28
5062 6623 3.300852 TGTTGTAGCCGTTGTCGATTA 57.699 42.857 0.00 0.00 39.71 1.75
5063 6624 2.157834 TGTTGTAGCCGTTGTCGATT 57.842 45.000 0.00 0.00 39.71 3.34
5064 6625 2.380084 ATGTTGTAGCCGTTGTCGAT 57.620 45.000 0.00 0.00 39.71 3.59
5065 6626 2.488937 TCTATGTTGTAGCCGTTGTCGA 59.511 45.455 0.00 0.00 39.71 4.20
5066 6627 2.871133 TCTATGTTGTAGCCGTTGTCG 58.129 47.619 0.00 0.00 0.00 4.35
5067 6628 5.589192 ACTATCTATGTTGTAGCCGTTGTC 58.411 41.667 0.00 0.00 0.00 3.18
5068 6629 5.589192 GACTATCTATGTTGTAGCCGTTGT 58.411 41.667 0.00 0.00 0.00 3.32
5069 6630 4.675565 CGACTATCTATGTTGTAGCCGTTG 59.324 45.833 0.00 0.00 0.00 4.10
5070 6631 4.577693 TCGACTATCTATGTTGTAGCCGTT 59.422 41.667 0.00 0.00 0.00 4.44
5071 6632 4.024218 GTCGACTATCTATGTTGTAGCCGT 60.024 45.833 8.70 0.00 0.00 5.68
5072 6633 4.024302 TGTCGACTATCTATGTTGTAGCCG 60.024 45.833 17.92 0.00 0.00 5.52
5073 6634 5.434352 TGTCGACTATCTATGTTGTAGCC 57.566 43.478 17.92 0.00 0.00 3.93
5074 6635 5.395778 CGTTGTCGACTATCTATGTTGTAGC 59.604 44.000 17.92 0.00 39.71 3.58
5075 6636 5.907945 CCGTTGTCGACTATCTATGTTGTAG 59.092 44.000 17.92 0.00 39.71 2.74
5076 6637 5.731406 GCCGTTGTCGACTATCTATGTTGTA 60.731 44.000 17.92 0.00 39.71 2.41
5077 6638 4.669318 CCGTTGTCGACTATCTATGTTGT 58.331 43.478 17.92 0.00 39.71 3.32
5078 6639 3.486108 GCCGTTGTCGACTATCTATGTTG 59.514 47.826 17.92 0.00 39.71 3.33
5079 6640 3.380637 AGCCGTTGTCGACTATCTATGTT 59.619 43.478 17.92 0.00 39.71 2.71
5080 6641 2.950309 AGCCGTTGTCGACTATCTATGT 59.050 45.455 17.92 0.00 39.71 2.29
5081 6642 3.627732 AGCCGTTGTCGACTATCTATG 57.372 47.619 17.92 2.79 39.71 2.23
5082 6643 4.132336 TGTAGCCGTTGTCGACTATCTAT 58.868 43.478 17.92 1.76 34.88 1.98
5083 6644 3.534554 TGTAGCCGTTGTCGACTATCTA 58.465 45.455 17.92 9.29 34.88 1.98
5084 6645 2.362736 TGTAGCCGTTGTCGACTATCT 58.637 47.619 17.92 10.20 34.88 1.98
5085 6646 2.838386 TGTAGCCGTTGTCGACTATC 57.162 50.000 17.92 6.16 34.88 2.08
5086 6647 2.229543 TGTTGTAGCCGTTGTCGACTAT 59.770 45.455 17.92 0.00 34.88 2.12
5087 6648 1.608109 TGTTGTAGCCGTTGTCGACTA 59.392 47.619 17.92 6.32 39.71 2.59
5088 6649 0.386476 TGTTGTAGCCGTTGTCGACT 59.614 50.000 17.92 0.00 39.71 4.18
5089 6650 1.210870 TTGTTGTAGCCGTTGTCGAC 58.789 50.000 9.11 9.11 39.71 4.20
5090 6651 2.157834 ATTGTTGTAGCCGTTGTCGA 57.842 45.000 0.00 0.00 39.71 4.20
5091 6652 3.615056 TGATATTGTTGTAGCCGTTGTCG 59.385 43.478 0.00 0.00 0.00 4.35
5092 6653 5.539582 TTGATATTGTTGTAGCCGTTGTC 57.460 39.130 0.00 0.00 0.00 3.18
5093 6654 5.950758 TTTGATATTGTTGTAGCCGTTGT 57.049 34.783 0.00 0.00 0.00 3.32
5094 6655 5.971202 GGATTTGATATTGTTGTAGCCGTTG 59.029 40.000 0.00 0.00 0.00 4.10
5095 6656 5.067283 GGGATTTGATATTGTTGTAGCCGTT 59.933 40.000 0.00 0.00 0.00 4.44
5096 6657 4.578928 GGGATTTGATATTGTTGTAGCCGT 59.421 41.667 0.00 0.00 0.00 5.68
5097 6658 4.821805 AGGGATTTGATATTGTTGTAGCCG 59.178 41.667 0.00 0.00 0.00 5.52
5098 6659 5.827797 TGAGGGATTTGATATTGTTGTAGCC 59.172 40.000 0.00 0.00 0.00 3.93
5099 6660 6.942532 TGAGGGATTTGATATTGTTGTAGC 57.057 37.500 0.00 0.00 0.00 3.58
5100 6661 7.420800 GCTTGAGGGATTTGATATTGTTGTAG 58.579 38.462 0.00 0.00 0.00 2.74
5101 6662 6.038161 CGCTTGAGGGATTTGATATTGTTGTA 59.962 38.462 0.00 0.00 0.00 2.41
5102 6663 5.163622 CGCTTGAGGGATTTGATATTGTTGT 60.164 40.000 0.00 0.00 0.00 3.32
5103 6664 5.276270 CGCTTGAGGGATTTGATATTGTTG 58.724 41.667 0.00 0.00 0.00 3.33
5104 6665 4.202050 GCGCTTGAGGGATTTGATATTGTT 60.202 41.667 0.00 0.00 0.00 2.83
5105 6666 3.316308 GCGCTTGAGGGATTTGATATTGT 59.684 43.478 0.00 0.00 0.00 2.71
5106 6667 3.304928 GGCGCTTGAGGGATTTGATATTG 60.305 47.826 7.64 0.00 0.00 1.90
5107 6668 2.887152 GGCGCTTGAGGGATTTGATATT 59.113 45.455 7.64 0.00 0.00 1.28
5108 6669 2.508526 GGCGCTTGAGGGATTTGATAT 58.491 47.619 7.64 0.00 0.00 1.63
5109 6670 1.476833 GGGCGCTTGAGGGATTTGATA 60.477 52.381 7.64 0.00 0.00 2.15
5110 6671 0.753111 GGGCGCTTGAGGGATTTGAT 60.753 55.000 7.64 0.00 0.00 2.57
5111 6672 1.378514 GGGCGCTTGAGGGATTTGA 60.379 57.895 7.64 0.00 0.00 2.69
5112 6673 2.764314 CGGGCGCTTGAGGGATTTG 61.764 63.158 7.64 0.00 0.00 2.32
5113 6674 2.438434 CGGGCGCTTGAGGGATTT 60.438 61.111 7.64 0.00 0.00 2.17
5114 6675 4.489771 CCGGGCGCTTGAGGGATT 62.490 66.667 7.64 0.00 0.00 3.01
5119 6680 4.379243 ACAGACCGGGCGCTTGAG 62.379 66.667 7.64 0.00 0.00 3.02
5120 6681 4.373116 GACAGACCGGGCGCTTGA 62.373 66.667 7.64 0.00 0.00 3.02
5127 6688 3.934391 GAAGGTGCGACAGACCGGG 62.934 68.421 6.32 0.00 38.64 5.73
5128 6689 2.432628 GAAGGTGCGACAGACCGG 60.433 66.667 0.00 0.00 38.64 5.28
5129 6690 1.444553 GAGAAGGTGCGACAGACCG 60.445 63.158 0.00 0.00 38.64 4.79
5130 6691 0.389166 CTGAGAAGGTGCGACAGACC 60.389 60.000 0.00 0.00 0.00 3.85
5131 6692 0.389166 CCTGAGAAGGTGCGACAGAC 60.389 60.000 0.00 0.00 0.00 3.51
5132 6693 1.536073 CCCTGAGAAGGTGCGACAGA 61.536 60.000 0.00 0.00 0.00 3.41
5133 6694 1.079543 CCCTGAGAAGGTGCGACAG 60.080 63.158 0.00 0.00 0.00 3.51
5134 6695 3.059982 CCCTGAGAAGGTGCGACA 58.940 61.111 0.00 0.00 0.00 4.35
5135 6696 2.435059 GCCCTGAGAAGGTGCGAC 60.435 66.667 0.00 0.00 0.00 5.19
5136 6697 2.293318 ATGCCCTGAGAAGGTGCGA 61.293 57.895 0.00 0.00 0.00 5.10
5137 6698 2.110967 CATGCCCTGAGAAGGTGCG 61.111 63.158 0.00 0.00 0.00 5.34
5138 6699 0.253044 TACATGCCCTGAGAAGGTGC 59.747 55.000 0.00 0.00 0.00 5.01
5139 6700 1.278985 TGTACATGCCCTGAGAAGGTG 59.721 52.381 0.00 0.00 0.00 4.00
5140 6701 1.656587 TGTACATGCCCTGAGAAGGT 58.343 50.000 0.00 0.00 0.00 3.50
5141 6702 2.787473 TTGTACATGCCCTGAGAAGG 57.213 50.000 0.00 0.00 0.00 3.46
5142 6703 2.947652 CCATTGTACATGCCCTGAGAAG 59.052 50.000 0.00 0.00 0.00 2.85
5143 6704 2.308570 ACCATTGTACATGCCCTGAGAA 59.691 45.455 0.00 0.00 0.00 2.87
5144 6705 1.915489 ACCATTGTACATGCCCTGAGA 59.085 47.619 0.00 0.00 0.00 3.27
5145 6706 2.424601 CAACCATTGTACATGCCCTGAG 59.575 50.000 0.00 0.00 0.00 3.35
5146 6707 2.040947 TCAACCATTGTACATGCCCTGA 59.959 45.455 0.00 0.00 0.00 3.86
5147 6708 2.445427 TCAACCATTGTACATGCCCTG 58.555 47.619 0.00 0.00 0.00 4.45
5148 6709 2.897271 TCAACCATTGTACATGCCCT 57.103 45.000 0.00 0.00 0.00 5.19
5149 6710 4.887071 TCTTATCAACCATTGTACATGCCC 59.113 41.667 0.00 0.00 0.00 5.36
5150 6711 6.639632 ATCTTATCAACCATTGTACATGCC 57.360 37.500 0.00 0.00 0.00 4.40
5151 6712 8.383318 ACTATCTTATCAACCATTGTACATGC 57.617 34.615 0.00 0.00 0.00 4.06
5152 6713 9.770097 AGACTATCTTATCAACCATTGTACATG 57.230 33.333 0.00 0.00 0.00 3.21
5185 6746 9.040939 GTCACCTTTAAATTACATGCAAAACTT 57.959 29.630 0.00 0.00 0.00 2.66
5186 6747 8.200792 TGTCACCTTTAAATTACATGCAAAACT 58.799 29.630 0.00 0.00 0.00 2.66
5187 6748 8.359060 TGTCACCTTTAAATTACATGCAAAAC 57.641 30.769 0.00 0.00 0.00 2.43
5188 6749 8.821894 GTTGTCACCTTTAAATTACATGCAAAA 58.178 29.630 0.00 0.00 0.00 2.44
5189 6750 7.168302 CGTTGTCACCTTTAAATTACATGCAAA 59.832 33.333 0.00 0.00 0.00 3.68
5190 6751 6.638873 CGTTGTCACCTTTAAATTACATGCAA 59.361 34.615 0.00 0.00 0.00 4.08
5191 6752 6.017026 TCGTTGTCACCTTTAAATTACATGCA 60.017 34.615 0.00 0.00 0.00 3.96
5192 6753 6.375377 TCGTTGTCACCTTTAAATTACATGC 58.625 36.000 0.00 0.00 0.00 4.06
5193 6754 8.789881 TTTCGTTGTCACCTTTAAATTACATG 57.210 30.769 0.00 0.00 0.00 3.21
5194 6755 9.804758 TTTTTCGTTGTCACCTTTAAATTACAT 57.195 25.926 0.00 0.00 0.00 2.29
5195 6756 9.804758 ATTTTTCGTTGTCACCTTTAAATTACA 57.195 25.926 0.00 0.00 0.00 2.41
5197 6758 9.804758 ACATTTTTCGTTGTCACCTTTAAATTA 57.195 25.926 0.00 0.00 0.00 1.40
5198 6759 8.710835 ACATTTTTCGTTGTCACCTTTAAATT 57.289 26.923 0.00 0.00 0.00 1.82
5199 6760 8.194769 AGACATTTTTCGTTGTCACCTTTAAAT 58.805 29.630 5.91 0.00 43.72 1.40
5200 6761 7.540299 AGACATTTTTCGTTGTCACCTTTAAA 58.460 30.769 5.91 0.00 43.72 1.52
5201 6762 7.090953 AGACATTTTTCGTTGTCACCTTTAA 57.909 32.000 5.91 0.00 43.72 1.52
5202 6763 6.687081 AGACATTTTTCGTTGTCACCTTTA 57.313 33.333 5.91 0.00 43.72 1.85
5203 6764 5.576447 AGACATTTTTCGTTGTCACCTTT 57.424 34.783 5.91 0.00 43.72 3.11
5204 6765 6.877611 ATAGACATTTTTCGTTGTCACCTT 57.122 33.333 5.91 0.00 43.72 3.50
5205 6766 7.972832 TTATAGACATTTTTCGTTGTCACCT 57.027 32.000 5.91 0.00 43.72 4.00
5206 6767 7.696453 CCATTATAGACATTTTTCGTTGTCACC 59.304 37.037 5.91 0.00 43.72 4.02
5207 6768 7.696453 CCCATTATAGACATTTTTCGTTGTCAC 59.304 37.037 5.91 0.00 43.72 3.67
5208 6769 7.392113 ACCCATTATAGACATTTTTCGTTGTCA 59.608 33.333 5.91 0.00 43.72 3.58
5209 6770 7.758495 ACCCATTATAGACATTTTTCGTTGTC 58.242 34.615 0.00 0.00 42.03 3.18
5210 6771 7.392113 TGACCCATTATAGACATTTTTCGTTGT 59.608 33.333 0.00 0.00 0.00 3.32
5211 6772 7.757526 TGACCCATTATAGACATTTTTCGTTG 58.242 34.615 0.00 0.00 0.00 4.10
5212 6773 7.931578 TGACCCATTATAGACATTTTTCGTT 57.068 32.000 0.00 0.00 0.00 3.85
5213 6774 7.993183 AGATGACCCATTATAGACATTTTTCGT 59.007 33.333 0.00 0.00 0.00 3.85
5214 6775 8.383318 AGATGACCCATTATAGACATTTTTCG 57.617 34.615 0.00 0.00 0.00 3.46
5215 6776 9.566432 AGAGATGACCCATTATAGACATTTTTC 57.434 33.333 0.00 0.00 0.00 2.29
5216 6777 9.927081 AAGAGATGACCCATTATAGACATTTTT 57.073 29.630 0.00 0.00 0.00 1.94
5219 6780 8.317679 GCTAAGAGATGACCCATTATAGACATT 58.682 37.037 0.00 0.00 0.00 2.71
5220 6781 7.093112 GGCTAAGAGATGACCCATTATAGACAT 60.093 40.741 0.00 0.00 0.00 3.06
5221 6782 6.211584 GGCTAAGAGATGACCCATTATAGACA 59.788 42.308 0.00 0.00 0.00 3.41
5222 6783 6.439058 AGGCTAAGAGATGACCCATTATAGAC 59.561 42.308 0.00 0.00 0.00 2.59
5223 6784 6.565974 AGGCTAAGAGATGACCCATTATAGA 58.434 40.000 0.00 0.00 0.00 1.98
5224 6785 6.865834 AGGCTAAGAGATGACCCATTATAG 57.134 41.667 0.00 0.00 0.00 1.31
5225 6786 8.917414 ATAAGGCTAAGAGATGACCCATTATA 57.083 34.615 0.00 0.00 0.00 0.98
5226 6787 7.682028 AGATAAGGCTAAGAGATGACCCATTAT 59.318 37.037 0.00 0.00 0.00 1.28
5227 6788 7.019388 AGATAAGGCTAAGAGATGACCCATTA 58.981 38.462 0.00 0.00 0.00 1.90
5228 6789 5.848921 AGATAAGGCTAAGAGATGACCCATT 59.151 40.000 0.00 0.00 0.00 3.16
5229 6790 5.410602 AGATAAGGCTAAGAGATGACCCAT 58.589 41.667 0.00 0.00 0.00 4.00
5230 6791 4.820775 AGATAAGGCTAAGAGATGACCCA 58.179 43.478 0.00 0.00 0.00 4.51
5231 6792 5.305644 TGAAGATAAGGCTAAGAGATGACCC 59.694 44.000 0.00 0.00 0.00 4.46
5232 6793 6.412362 TGAAGATAAGGCTAAGAGATGACC 57.588 41.667 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.