Multiple sequence alignment - TraesCS2A01G067500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G067500 chr2A 100.000 5975 0 0 1 5975 30137962 30131988 0.000000e+00 11034.0
1 TraesCS2A01G067500 chr2B 86.914 2025 159 51 18 1988 44410352 44408380 0.000000e+00 2174.0
2 TraesCS2A01G067500 chr2B 87.799 1254 96 22 2174 3388 44408161 44406926 0.000000e+00 1415.0
3 TraesCS2A01G067500 chr2B 91.041 826 59 8 3411 4227 44406929 44406110 0.000000e+00 1101.0
4 TraesCS2A01G067500 chr2B 85.152 559 58 18 4599 5147 44405403 44404860 3.150000e-152 549.0
5 TraesCS2A01G067500 chr2B 95.146 309 9 3 5572 5874 44404421 44404113 3.240000e-132 483.0
6 TraesCS2A01G067500 chr2B 80.612 294 50 7 4250 4540 44406028 44405739 2.800000e-53 220.0
7 TraesCS2A01G067500 chr2D 88.354 1829 90 54 4109 5874 27909039 27907271 0.000000e+00 2084.0
8 TraesCS2A01G067500 chr2D 87.034 1234 125 18 2174 3388 27911025 27909808 0.000000e+00 1360.0
9 TraesCS2A01G067500 chr2D 95.231 713 34 0 3411 4123 27909811 27909099 0.000000e+00 1129.0
10 TraesCS2A01G067500 chr2D 89.029 793 42 24 800 1583 27912723 27911967 0.000000e+00 941.0
11 TraesCS2A01G067500 chr2D 85.809 606 64 11 24 613 27913742 27913143 1.830000e-174 623.0
12 TraesCS2A01G067500 chr2D 89.583 240 24 1 1901 2139 27911251 27911012 2.710000e-78 303.0
13 TraesCS2A01G067500 chr2D 87.692 195 19 2 618 812 27912931 27912742 7.790000e-54 222.0
14 TraesCS2A01G067500 chr7B 82.530 332 45 9 4598 4923 358106582 358106906 4.560000e-71 279.0
15 TraesCS2A01G067500 chr7B 83.505 97 14 2 1415 1510 716024678 716024583 8.250000e-14 89.8
16 TraesCS2A01G067500 chr5D 83.333 108 16 1 1405 1510 428716730 428716623 1.370000e-16 99.0
17 TraesCS2A01G067500 chr5B 82.407 108 17 1 1405 1510 517868661 517868554 6.380000e-15 93.5
18 TraesCS2A01G067500 chr5A 82.828 99 17 0 1412 1510 544568350 544568252 8.250000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G067500 chr2A 30131988 30137962 5974 True 11034.000000 11034 100.000000 1 5975 1 chr2A.!!$R1 5974
1 TraesCS2A01G067500 chr2B 44404113 44410352 6239 True 990.333333 2174 87.777333 18 5874 6 chr2B.!!$R1 5856
2 TraesCS2A01G067500 chr2D 27907271 27913742 6471 True 951.714286 2084 88.961714 24 5874 7 chr2D.!!$R1 5850

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
701 940 0.032217 TGGAAAAGGGGGATGCCATC 60.032 55.0 5.30 0.0 0.00 3.51 F
1619 1931 0.362179 CGTCGCCGCATATCATAACG 59.638 55.0 0.00 0.0 0.00 3.18 F
3319 4166 0.106268 TTTTGGAGACCAAGGCAGCA 60.106 50.0 3.49 0.0 44.84 4.41 F
3333 4180 0.250467 GCAGCACAGACCAAGAGGAA 60.250 55.0 0.00 0.0 38.69 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2603 3443 0.107508 AACTGTGCTGTGACTGCTGT 60.108 50.0 15.36 8.77 0.00 4.40 R
3486 4333 0.179076 TGCCAGTGATGGTGATAGCG 60.179 55.0 0.00 0.00 0.00 4.26 R
4255 5238 0.036306 ACAAGGCGGAGGTTGGTTAG 59.964 55.0 0.00 0.00 0.00 2.34 R
5128 6416 0.322975 CAGGGAAGCTACTGCACTGT 59.677 55.0 0.00 0.00 42.74 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 62 7.230510 TCGGCCTATTTCTTTTATATGCAATGT 59.769 33.333 0.00 0.00 0.00 2.71
105 107 5.121454 TGCAAAATCCATTTAAAACGCATCC 59.879 36.000 0.00 0.00 0.00 3.51
207 214 1.607467 GAAATGGTGTGGCAGGCCT 60.607 57.895 12.19 0.00 36.94 5.19
215 222 1.202348 GTGTGGCAGGCCTATTTGAAC 59.798 52.381 3.98 0.00 36.94 3.18
255 262 9.165014 CAAATCACAGAAATTTGCATGAAAAAG 57.835 29.630 2.14 0.00 37.31 2.27
358 370 6.939551 TTCCTAACTCGTAACGATTTCAAG 57.060 37.500 0.00 0.00 34.61 3.02
392 404 5.981088 AATGGCTGTGTATGACAAATTCA 57.019 34.783 0.00 0.00 39.11 2.57
504 528 1.930567 TATGCGCGGTTCTTTACTCC 58.069 50.000 8.83 0.00 0.00 3.85
559 583 2.124151 GCGTTGCCCCCATCTCAT 60.124 61.111 0.00 0.00 0.00 2.90
561 585 1.224315 CGTTGCCCCCATCTCATCA 59.776 57.895 0.00 0.00 0.00 3.07
575 599 3.729108 TCTCATCAGGGATCAAACCTCT 58.271 45.455 0.00 0.00 35.78 3.69
625 864 8.291191 ACACTTGTAACTACTCCTAGATTACC 57.709 38.462 0.00 0.00 0.00 2.85
633 872 4.338379 ACTCCTAGATTACCGGCATTTC 57.662 45.455 0.00 0.00 0.00 2.17
667 906 2.041405 GTGAGAGGGGAGGAGGGG 60.041 72.222 0.00 0.00 0.00 4.79
669 908 3.369388 GAGAGGGGAGGAGGGGGT 61.369 72.222 0.00 0.00 0.00 4.95
701 940 0.032217 TGGAAAAGGGGGATGCCATC 60.032 55.000 5.30 0.00 0.00 3.51
720 962 2.184322 CTTAGGCCGAAGCGCTCA 59.816 61.111 12.06 0.00 41.24 4.26
725 967 2.476499 GCCGAAGCGCTCACTTTC 59.524 61.111 12.06 2.47 0.00 2.62
764 1006 4.084693 CCCACGACGAGTAAGAAAAGAAAC 60.085 45.833 0.00 0.00 0.00 2.78
773 1015 6.061231 AGTAAGAAAAGAAACCAAAGCGAG 57.939 37.500 0.00 0.00 0.00 5.03
787 1030 1.755179 AGCGAGCACAATTATTGCCT 58.245 45.000 4.68 1.78 41.18 4.75
798 1041 4.876107 ACAATTATTGCCTTCCGTACTCTG 59.124 41.667 4.68 0.00 0.00 3.35
802 1045 1.344065 TGCCTTCCGTACTCTGGAAA 58.656 50.000 2.85 0.00 44.52 3.13
817 1093 9.101655 GTACTCTGGAAACCGCTAAAAATAATA 57.898 33.333 0.00 0.00 0.00 0.98
1011 1293 2.883828 ATCCCCGATGATGACCGCC 61.884 63.158 0.00 0.00 0.00 6.13
1013 1295 2.588877 CCCGATGATGACCGCCAC 60.589 66.667 0.00 0.00 0.00 5.01
1014 1296 2.588877 CCGATGATGACCGCCACC 60.589 66.667 0.00 0.00 0.00 4.61
1015 1297 2.588877 CGATGATGACCGCCACCC 60.589 66.667 0.00 0.00 0.00 4.61
1016 1298 2.589540 GATGATGACCGCCACCCA 59.410 61.111 0.00 0.00 0.00 4.51
1017 1299 1.524621 GATGATGACCGCCACCCAG 60.525 63.158 0.00 0.00 0.00 4.45
1018 1300 3.704231 ATGATGACCGCCACCCAGC 62.704 63.158 0.00 0.00 0.00 4.85
1314 1611 0.373716 GCAACCTCGGATTGTAAGCG 59.626 55.000 0.00 0.00 0.00 4.68
1317 1615 1.887707 CCTCGGATTGTAAGCGCCC 60.888 63.158 2.29 0.00 0.00 6.13
1324 1622 3.918253 TTGTAAGCGCCCCCAGCTG 62.918 63.158 6.78 6.78 45.31 4.24
1325 1623 4.410400 GTAAGCGCCCCCAGCTGT 62.410 66.667 13.81 0.00 45.31 4.40
1326 1624 3.646715 TAAGCGCCCCCAGCTGTT 61.647 61.111 13.81 0.54 45.31 3.16
1327 1625 3.918253 TAAGCGCCCCCAGCTGTTG 62.918 63.158 13.81 3.04 45.31 3.33
1345 1643 2.201708 GCTACCTACCCCCTCTCGC 61.202 68.421 0.00 0.00 0.00 5.03
1360 1658 0.792640 CTCGCGATTCTGTGTGCTTT 59.207 50.000 10.36 0.00 0.00 3.51
1361 1659 1.195448 CTCGCGATTCTGTGTGCTTTT 59.805 47.619 10.36 0.00 0.00 2.27
1362 1660 1.069973 TCGCGATTCTGTGTGCTTTTG 60.070 47.619 3.71 0.00 0.00 2.44
1363 1661 1.689959 GCGATTCTGTGTGCTTTTGG 58.310 50.000 0.00 0.00 0.00 3.28
1364 1662 1.001378 GCGATTCTGTGTGCTTTTGGT 60.001 47.619 0.00 0.00 0.00 3.67
1366 1664 3.300009 CGATTCTGTGTGCTTTTGGTTC 58.700 45.455 0.00 0.00 0.00 3.62
1367 1665 3.003689 CGATTCTGTGTGCTTTTGGTTCT 59.996 43.478 0.00 0.00 0.00 3.01
1368 1666 4.498009 CGATTCTGTGTGCTTTTGGTTCTT 60.498 41.667 0.00 0.00 0.00 2.52
1369 1667 4.370364 TTCTGTGTGCTTTTGGTTCTTC 57.630 40.909 0.00 0.00 0.00 2.87
1370 1668 3.351740 TCTGTGTGCTTTTGGTTCTTCA 58.648 40.909 0.00 0.00 0.00 3.02
1384 1682 4.698780 TGGTTCTTCAGAATTCAGATGCTG 59.301 41.667 8.44 0.00 39.91 4.41
1386 1684 5.163774 GGTTCTTCAGAATTCAGATGCTGAC 60.164 44.000 8.44 7.06 45.69 3.51
1393 1691 5.519566 CAGAATTCAGATGCTGACTACTGTC 59.480 44.000 8.44 0.00 40.88 3.51
1395 1693 4.446994 TTCAGATGCTGACTACTGTCTG 57.553 45.455 0.00 0.00 40.46 3.51
1564 1864 1.874345 CGCACCGGTAACACCTCTCT 61.874 60.000 6.87 0.00 35.66 3.10
1584 1884 0.390472 CCTCCTCACAGTTTCGCTCC 60.390 60.000 0.00 0.00 0.00 4.70
1589 1889 1.118965 TCACAGTTTCGCTCCCTGGA 61.119 55.000 0.00 0.00 0.00 3.86
1594 1906 1.078214 TTTCGCTCCCTGGATGCAG 60.078 57.895 7.35 7.35 0.00 4.41
1619 1931 0.362179 CGTCGCCGCATATCATAACG 59.638 55.000 0.00 0.00 0.00 3.18
1621 1933 1.011968 TCGCCGCATATCATAACGCC 61.012 55.000 0.00 0.00 0.00 5.68
1622 1934 1.419922 GCCGCATATCATAACGCCG 59.580 57.895 0.00 0.00 0.00 6.46
1624 1936 0.992072 CCGCATATCATAACGCCGAG 59.008 55.000 0.00 0.00 0.00 4.63
1625 1937 1.668919 CCGCATATCATAACGCCGAGT 60.669 52.381 0.00 0.00 0.00 4.18
1632 1944 3.520290 TCATAACGCCGAGTCTGAATT 57.480 42.857 0.00 0.00 0.00 2.17
1640 1952 0.363512 CGAGTCTGAATTCACACGCG 59.636 55.000 21.06 21.06 33.04 6.01
1642 1954 1.132640 GTCTGAATTCACACGCGGC 59.867 57.895 12.47 0.00 0.00 6.53
1655 1967 0.511221 ACGCGGCATGTTTATATCGC 59.489 50.000 12.47 0.00 39.79 4.58
1666 1978 6.373779 CATGTTTATATCGCATTCTGTTCCC 58.626 40.000 0.00 0.00 0.00 3.97
1683 2000 3.518634 TCCCATTAAAATTTGCTCCGC 57.481 42.857 0.00 0.00 0.00 5.54
1687 2004 2.339728 TTAAAATTTGCTCCGCCGTG 57.660 45.000 0.00 0.00 0.00 4.94
1710 2027 3.262405 TGTCCTAATAAGGTGGCGAAACT 59.738 43.478 0.00 0.00 44.09 2.66
1711 2028 3.621715 GTCCTAATAAGGTGGCGAAACTG 59.378 47.826 0.00 0.00 44.09 3.16
1715 2032 1.448985 TAAGGTGGCGAAACTGATGC 58.551 50.000 0.00 0.00 0.00 3.91
1723 2040 2.225491 GGCGAAACTGATGCAAAGTGTA 59.775 45.455 6.21 0.00 0.00 2.90
1779 2107 5.268118 TGTGGTATCATCATCTCACACTC 57.732 43.478 0.00 0.00 31.33 3.51
1786 2301 4.891260 TCATCATCTCACACTCCATATGC 58.109 43.478 0.00 0.00 0.00 3.14
1882 2574 7.462109 TGAATTTCACTGCAATGTTGTTTAC 57.538 32.000 0.00 0.00 0.00 2.01
1971 2686 1.726791 GGTTGTCACAGTCTATGCGTG 59.273 52.381 0.00 0.00 0.00 5.34
2019 2816 7.643528 ATCGTTAATGTGTATATCAGCACTG 57.356 36.000 0.00 0.00 36.63 3.66
2093 2890 2.099141 AACACTGATCGGTGGTGATG 57.901 50.000 32.69 12.05 41.09 3.07
2099 2896 3.119101 ACTGATCGGTGGTGATGAGTTAC 60.119 47.826 6.33 0.00 39.36 2.50
2139 2936 7.546667 AGTGTTCTTTGACTGTTCGTAGTTAAA 59.453 33.333 0.00 0.00 34.87 1.52
2141 2938 8.885722 TGTTCTTTGACTGTTCGTAGTTAAATT 58.114 29.630 0.00 0.00 36.15 1.82
2142 2939 9.712359 GTTCTTTGACTGTTCGTAGTTAAATTT 57.288 29.630 0.00 0.00 36.15 1.82
2175 2972 3.866582 GACATCCCCGGCCTCCTG 61.867 72.222 0.00 0.00 0.00 3.86
2176 2973 4.741239 ACATCCCCGGCCTCCTGT 62.741 66.667 0.00 0.00 0.00 4.00
2177 2974 3.411517 CATCCCCGGCCTCCTGTT 61.412 66.667 0.00 0.00 0.00 3.16
2178 2975 3.090532 ATCCCCGGCCTCCTGTTC 61.091 66.667 0.00 0.00 0.00 3.18
2181 2978 3.072468 CCCGGCCTCCTGTTCGTA 61.072 66.667 0.00 0.00 0.00 3.43
2182 2979 2.494918 CCGGCCTCCTGTTCGTAG 59.505 66.667 0.00 0.00 0.00 3.51
2183 2980 2.348888 CCGGCCTCCTGTTCGTAGT 61.349 63.158 0.00 0.00 0.00 2.73
2184 2981 1.590147 CGGCCTCCTGTTCGTAGTT 59.410 57.895 0.00 0.00 0.00 2.24
2185 2982 0.813184 CGGCCTCCTGTTCGTAGTTA 59.187 55.000 0.00 0.00 0.00 2.24
2186 2983 1.203052 CGGCCTCCTGTTCGTAGTTAA 59.797 52.381 0.00 0.00 0.00 2.01
2187 2984 2.159142 CGGCCTCCTGTTCGTAGTTAAT 60.159 50.000 0.00 0.00 0.00 1.40
2188 2985 3.455327 GGCCTCCTGTTCGTAGTTAATC 58.545 50.000 0.00 0.00 0.00 1.75
2189 2986 3.118884 GGCCTCCTGTTCGTAGTTAATCA 60.119 47.826 0.00 0.00 0.00 2.57
2190 2987 3.864003 GCCTCCTGTTCGTAGTTAATCAC 59.136 47.826 0.00 0.00 0.00 3.06
2191 2988 4.619863 GCCTCCTGTTCGTAGTTAATCACA 60.620 45.833 0.00 0.00 0.00 3.58
2192 2989 5.661458 CCTCCTGTTCGTAGTTAATCACAT 58.339 41.667 0.00 0.00 0.00 3.21
2193 2990 5.520288 CCTCCTGTTCGTAGTTAATCACATG 59.480 44.000 0.00 0.00 0.00 3.21
2194 2991 4.868171 TCCTGTTCGTAGTTAATCACATGC 59.132 41.667 0.00 0.00 0.00 4.06
2195 2992 4.034048 CCTGTTCGTAGTTAATCACATGCC 59.966 45.833 0.00 0.00 0.00 4.40
2196 2993 3.615056 TGTTCGTAGTTAATCACATGCCG 59.385 43.478 0.00 0.00 0.00 5.69
2208 3005 3.071479 TCACATGCCGGTTCTTTTCTAC 58.929 45.455 1.90 0.00 0.00 2.59
2272 3069 6.948886 AGAAAGGTCTGAAGTGTAGATCTACA 59.051 38.462 27.96 27.96 34.63 2.74
2273 3070 6.767524 AAGGTCTGAAGTGTAGATCTACAG 57.232 41.667 31.31 20.55 45.61 2.74
2302 3104 5.171476 TGAACTTTCCATTTTCGTTTGCAA 58.829 33.333 0.00 0.00 0.00 4.08
2316 3118 6.561945 TCGTTTGCAACTTGTTTTATGTTC 57.438 33.333 0.00 0.00 0.00 3.18
2318 3120 5.553581 CGTTTGCAACTTGTTTTATGTTCCG 60.554 40.000 0.00 0.00 0.00 4.30
2327 3129 7.083858 ACTTGTTTTATGTTCCGTTGATCATG 58.916 34.615 0.00 0.00 33.85 3.07
2329 3131 5.707764 TGTTTTATGTTCCGTTGATCATGGA 59.292 36.000 12.02 12.02 39.03 3.41
2355 3157 4.201822 GGTTCAAACCGCATAGATCTGAAC 60.202 45.833 5.18 7.71 39.66 3.18
2375 3199 8.830580 TCTGAACTGTACTGAAAGAAAATTCTG 58.169 33.333 6.77 2.37 37.65 3.02
2376 3200 7.930217 TGAACTGTACTGAAAGAAAATTCTGG 58.070 34.615 6.77 0.00 37.65 3.86
2478 3318 6.995511 TTGCATACATAAGTAACACCCTTC 57.004 37.500 0.00 0.00 33.13 3.46
2502 3342 3.243535 GGGTTTTCTCCTCTTGTTTGCAG 60.244 47.826 0.00 0.00 0.00 4.41
2535 3375 8.188799 TGTTCGACAGTTAATATTCAGGTCTAG 58.811 37.037 0.00 0.00 0.00 2.43
2579 3419 3.399330 TGCAGTCCTTAGCACTACAAAC 58.601 45.455 0.00 0.00 35.51 2.93
2603 3443 1.366787 TGGTGTAGGGGTCATTAGGGA 59.633 52.381 0.00 0.00 0.00 4.20
2604 3444 1.767088 GGTGTAGGGGTCATTAGGGAC 59.233 57.143 0.00 0.00 37.06 4.46
2605 3445 2.474112 GTGTAGGGGTCATTAGGGACA 58.526 52.381 0.00 0.00 39.59 4.02
2606 3446 2.434702 GTGTAGGGGTCATTAGGGACAG 59.565 54.545 0.00 0.00 39.59 3.51
2607 3447 1.416772 GTAGGGGTCATTAGGGACAGC 59.583 57.143 0.00 0.00 39.59 4.40
2608 3448 0.253160 AGGGGTCATTAGGGACAGCA 60.253 55.000 0.00 0.00 39.59 4.41
2609 3449 0.181350 GGGGTCATTAGGGACAGCAG 59.819 60.000 0.00 0.00 39.59 4.24
2610 3450 0.912486 GGGTCATTAGGGACAGCAGT 59.088 55.000 0.00 0.00 39.59 4.40
2611 3451 1.134371 GGGTCATTAGGGACAGCAGTC 60.134 57.143 0.00 0.00 44.21 3.51
2625 3465 2.159037 CAGCAGTCACAGCACAGTTATG 59.841 50.000 0.00 0.00 0.00 1.90
2651 3491 7.706607 GCCCAAAATTAATCTTCATACCTTGAC 59.293 37.037 0.00 0.00 32.84 3.18
2684 3524 9.078753 TCATTGTAAAAACGTTTTTCTTTCCTC 57.921 29.630 35.13 19.72 40.53 3.71
2754 3596 2.959507 ACCTTTTGTTGTCACCTTGC 57.040 45.000 0.00 0.00 0.00 4.01
2774 3616 3.184541 GCTGTATGCCTGCATTTTTCTG 58.815 45.455 10.27 4.88 37.82 3.02
2783 3625 5.752955 TGCCTGCATTTTTCTGTTTTTAGAC 59.247 36.000 0.00 0.00 0.00 2.59
2786 3628 7.011389 GCCTGCATTTTTCTGTTTTTAGACTTT 59.989 33.333 0.00 0.00 0.00 2.66
2847 3693 3.009143 AGGCTTCGTTTTACATCCCTTCT 59.991 43.478 0.00 0.00 0.00 2.85
2848 3694 3.374367 GGCTTCGTTTTACATCCCTTCTC 59.626 47.826 0.00 0.00 0.00 2.87
2865 3711 3.049708 TCTCTGTCATCAACAAGCCAG 57.950 47.619 0.00 0.00 37.45 4.85
2892 3738 4.503741 TCCTTGCAATAGTGACTTTTGC 57.496 40.909 26.62 26.62 44.47 3.68
2982 3828 6.718454 ACACATCATCTTCTGGATTTCTTGTT 59.282 34.615 0.00 0.00 31.27 2.83
3086 3933 7.815840 TCTTTATGTGGTGAGATGAAAAACA 57.184 32.000 0.00 0.00 0.00 2.83
3088 3935 8.859090 TCTTTATGTGGTGAGATGAAAAACATT 58.141 29.630 0.00 0.00 39.56 2.71
3094 3941 9.474920 TGTGGTGAGATGAAAAACATTATTTTC 57.525 29.630 5.74 5.74 45.32 2.29
3153 4000 0.318762 GTTGCGGAGAGGTTCAGACT 59.681 55.000 0.00 0.00 0.00 3.24
3192 4039 1.067060 GCTGCTCCAAACGGTCTTTTT 59.933 47.619 0.00 0.00 0.00 1.94
3204 4051 1.686587 GGTCTTTTTGGACTTGGGGTG 59.313 52.381 0.00 0.00 36.55 4.61
3282 4129 1.066303 TCAATGTGTTTTGGCCGTGAC 59.934 47.619 0.00 0.00 0.00 3.67
3319 4166 0.106268 TTTTGGAGACCAAGGCAGCA 60.106 50.000 3.49 0.00 44.84 4.41
3321 4168 1.993701 TTGGAGACCAAGGCAGCACA 61.994 55.000 0.00 0.00 38.75 4.57
3330 4177 0.250640 AAGGCAGCACAGACCAAGAG 60.251 55.000 0.00 0.00 0.00 2.85
3333 4180 0.250467 GCAGCACAGACCAAGAGGAA 60.250 55.000 0.00 0.00 38.69 3.36
3373 4220 8.412456 TCAATCAGAAACAGTGAGCAAAATTTA 58.588 29.630 0.00 0.00 0.00 1.40
3384 4231 8.253113 CAGTGAGCAAAATTTATCCATTTACCT 58.747 33.333 0.00 0.00 0.00 3.08
3385 4232 8.253113 AGTGAGCAAAATTTATCCATTTACCTG 58.747 33.333 0.00 0.00 0.00 4.00
3386 4233 7.492344 GTGAGCAAAATTTATCCATTTACCTGG 59.508 37.037 0.00 0.00 37.66 4.45
3387 4234 6.348498 AGCAAAATTTATCCATTTACCTGGC 58.652 36.000 0.00 0.00 36.16 4.85
3388 4235 6.156775 AGCAAAATTTATCCATTTACCTGGCT 59.843 34.615 0.00 0.00 36.16 4.75
3389 4236 6.823182 GCAAAATTTATCCATTTACCTGGCTT 59.177 34.615 0.00 0.00 36.16 4.35
3390 4237 7.984617 GCAAAATTTATCCATTTACCTGGCTTA 59.015 33.333 0.00 0.00 36.16 3.09
3391 4238 9.313118 CAAAATTTATCCATTTACCTGGCTTAC 57.687 33.333 0.00 0.00 36.16 2.34
3392 4239 8.602472 AAATTTATCCATTTACCTGGCTTACA 57.398 30.769 0.00 0.00 36.16 2.41
3393 4240 8.602472 AATTTATCCATTTACCTGGCTTACAA 57.398 30.769 0.00 0.00 36.16 2.41
3394 4241 8.782137 ATTTATCCATTTACCTGGCTTACAAT 57.218 30.769 0.00 0.00 36.16 2.71
3395 4242 8.602472 TTTATCCATTTACCTGGCTTACAATT 57.398 30.769 0.00 0.00 36.16 2.32
3396 4243 9.702253 TTTATCCATTTACCTGGCTTACAATTA 57.298 29.630 0.00 0.00 36.16 1.40
3397 4244 7.823745 ATCCATTTACCTGGCTTACAATTAG 57.176 36.000 0.00 0.00 36.16 1.73
3398 4245 6.126409 TCCATTTACCTGGCTTACAATTAGG 58.874 40.000 0.00 0.00 36.16 2.69
3399 4246 5.891551 CCATTTACCTGGCTTACAATTAGGT 59.108 40.000 0.00 0.00 43.69 3.08
3400 4247 7.057894 CCATTTACCTGGCTTACAATTAGGTA 58.942 38.462 0.00 0.00 41.67 3.08
3401 4248 7.724061 CCATTTACCTGGCTTACAATTAGGTAT 59.276 37.037 0.00 0.00 41.98 2.73
3402 4249 9.131791 CATTTACCTGGCTTACAATTAGGTATT 57.868 33.333 0.00 0.00 41.98 1.89
3430 4277 1.236616 TGCCAAGTCCATTGCTGTCG 61.237 55.000 0.00 0.00 37.60 4.35
3436 4283 2.270205 CCATTGCTGTCGGCCTCT 59.730 61.111 0.00 0.00 40.92 3.69
3439 4286 0.957395 CATTGCTGTCGGCCTCTTGT 60.957 55.000 0.00 0.00 40.92 3.16
3450 4297 2.672961 GCCTCTTGTTAATTTGGCCC 57.327 50.000 0.00 0.00 34.81 5.80
3451 4298 1.899142 GCCTCTTGTTAATTTGGCCCA 59.101 47.619 0.00 0.00 34.81 5.36
3452 4299 2.501316 GCCTCTTGTTAATTTGGCCCAT 59.499 45.455 0.00 0.00 34.81 4.00
3486 4333 1.917872 TGTTTTCCAGCCCCACATAC 58.082 50.000 0.00 0.00 0.00 2.39
3564 4411 4.525487 AGTACTATTTTCGACACAGGGACA 59.475 41.667 0.00 0.00 0.00 4.02
3668 4519 5.713861 GCTTCAATAGGGGAATATTCATGCT 59.286 40.000 17.07 0.00 0.00 3.79
3707 4558 5.415701 TCAGTTCCATAATCAAGTTCAAGCC 59.584 40.000 0.00 0.00 0.00 4.35
3734 4585 1.329906 CATGCCGCTGACTCAAGAATC 59.670 52.381 0.00 0.00 0.00 2.52
3765 4616 6.861572 CGAATATTGCTACGATCTGAGGTTAA 59.138 38.462 0.00 0.00 0.00 2.01
3774 4628 7.148950 GCTACGATCTGAGGTTAATTTATGTCG 60.149 40.741 0.00 0.00 0.00 4.35
3777 4631 6.146184 CGATCTGAGGTTAATTTATGTCGCAT 59.854 38.462 0.00 0.00 0.00 4.73
3988 4844 7.308770 CCTCAGATTGTGCAATTCTCTTAACAA 60.309 37.037 0.00 0.00 32.60 2.83
4014 4870 4.508124 GGAACAGGCTCAGATTATGTAACG 59.492 45.833 0.00 0.00 0.00 3.18
4130 4986 3.157087 ACTGCAGAACCATTACTTTGGG 58.843 45.455 23.35 0.00 41.35 4.12
4132 4988 3.153919 TGCAGAACCATTACTTTGGGAC 58.846 45.455 0.00 0.00 41.35 4.46
4148 5079 3.674997 TGGGACTCTTCTGTTGCATTAC 58.325 45.455 0.00 0.00 0.00 1.89
4232 5215 7.978414 TGAGATCATTGACAAGAACAGAGTATC 59.022 37.037 0.00 0.00 0.00 2.24
4252 5235 3.670625 TCTGTTGTAATTTCGTCCCCAG 58.329 45.455 0.00 0.00 0.00 4.45
4255 5238 3.816523 TGTTGTAATTTCGTCCCCAGAAC 59.183 43.478 0.00 0.00 0.00 3.01
4256 5239 4.070009 GTTGTAATTTCGTCCCCAGAACT 58.930 43.478 0.00 0.00 0.00 3.01
4274 5263 0.036306 CTAACCAACCTCCGCCTTGT 59.964 55.000 0.00 0.00 0.00 3.16
4286 5275 2.159170 TCCGCCTTGTTCAAAACCAAAG 60.159 45.455 0.00 0.00 0.00 2.77
4296 5285 5.186797 TGTTCAAAACCAAAGTCATCTTGGT 59.813 36.000 1.37 1.37 36.99 3.67
4310 5299 4.216257 TCATCTTGGTTTTTCAGCACTAGC 59.784 41.667 0.00 0.00 42.56 3.42
4343 5335 5.845103 TCACTTATGACGGTAACAGAACAA 58.155 37.500 0.00 0.00 0.00 2.83
4381 5373 6.138088 GCATTTCACATTCTTTTCTTTTGCC 58.862 36.000 0.00 0.00 0.00 4.52
4396 5388 1.093972 TTGCCGTGATTGCCAGTATG 58.906 50.000 0.00 0.00 0.00 2.39
4412 5404 5.870978 GCCAGTATGAACAATTGCAAATCTT 59.129 36.000 1.71 1.34 39.69 2.40
4414 5406 7.622672 GCCAGTATGAACAATTGCAAATCTTTG 60.623 37.037 1.71 6.06 39.69 2.77
4415 5407 7.385752 CCAGTATGAACAATTGCAAATCTTTGT 59.614 33.333 1.71 6.79 39.69 2.83
4504 5496 7.572523 AAACTGTGATAACATCATGTATGGG 57.427 36.000 0.00 0.00 42.04 4.00
4741 6010 6.444633 AGTCATTTGCTTATTATGCTCATGC 58.555 36.000 3.56 0.00 40.20 4.06
4757 6026 4.154737 GCTCATGCTATGTTTGTTCTGTGA 59.845 41.667 0.00 0.00 36.03 3.58
4759 6028 6.000891 TCATGCTATGTTTGTTCTGTGAAC 57.999 37.500 3.74 3.74 0.00 3.18
4939 6209 6.451064 GGCACAATAATAGCCTACTTTTGT 57.549 37.500 0.00 0.00 44.92 2.83
4941 6211 7.320399 GGCACAATAATAGCCTACTTTTGTTT 58.680 34.615 0.00 0.00 44.92 2.83
4951 6221 7.107639 AGCCTACTTTTGTTTATGTTTGTGT 57.892 32.000 0.00 0.00 0.00 3.72
4961 6231 6.511416 TGTTTATGTTTGTGTTCCTCCATTG 58.489 36.000 0.00 0.00 0.00 2.82
4962 6232 3.665745 ATGTTTGTGTTCCTCCATTGC 57.334 42.857 0.00 0.00 0.00 3.56
4964 6234 1.000843 GTTTGTGTTCCTCCATTGCCC 59.999 52.381 0.00 0.00 0.00 5.36
4965 6235 0.187117 TTGTGTTCCTCCATTGCCCA 59.813 50.000 0.00 0.00 0.00 5.36
4994 6264 2.583024 TTGGCATTGGAGTGACATGA 57.417 45.000 0.00 0.00 36.90 3.07
5067 6350 3.243941 ACAACGAGCACCACTTACATGTA 60.244 43.478 0.08 0.08 0.00 2.29
5185 6513 3.536158 TTTGCCTTTTCGTCAGAATCG 57.464 42.857 0.00 0.00 36.09 3.34
5196 6524 1.550976 GTCAGAATCGTCCCAGGTTCT 59.449 52.381 0.00 0.00 0.00 3.01
5226 6554 5.124457 CAGAGTGGAATAAACAAGGACATGG 59.876 44.000 0.00 0.00 0.00 3.66
5227 6555 4.998051 AGTGGAATAAACAAGGACATGGT 58.002 39.130 0.00 0.00 0.00 3.55
5237 6565 9.747898 ATAAACAAGGACATGGTTTTACATCTA 57.252 29.630 0.00 0.00 36.29 1.98
5238 6566 7.687941 AACAAGGACATGGTTTTACATCTAG 57.312 36.000 0.00 0.00 0.00 2.43
5280 6618 3.119291 CCGGAGATGATTTCGTCAGAAG 58.881 50.000 0.00 0.00 40.92 2.85
5281 6619 3.429547 CCGGAGATGATTTCGTCAGAAGT 60.430 47.826 0.00 0.00 40.92 3.01
5296 6634 3.135348 TCAGAAGTATCCCAGGATTGCAG 59.865 47.826 4.13 0.00 36.17 4.41
5304 6642 2.173519 CCCAGGATTGCAGTGTGATTT 58.826 47.619 0.00 0.00 0.00 2.17
5329 6667 7.622893 AAAAGATTCAGAGCTTATGGAGAAC 57.377 36.000 0.00 0.00 29.85 3.01
5360 6700 5.966636 TGCTAATAATCTGTGCAGTTACG 57.033 39.130 0.00 0.00 0.00 3.18
5388 6728 4.100189 AGTTTCTATTATCTGAGGCGCTGT 59.900 41.667 7.64 0.00 0.00 4.40
5389 6729 3.924918 TCTATTATCTGAGGCGCTGTC 57.075 47.619 7.64 5.24 0.00 3.51
5390 6730 3.491342 TCTATTATCTGAGGCGCTGTCT 58.509 45.455 7.64 0.00 0.00 3.41
5391 6731 2.522836 ATTATCTGAGGCGCTGTCTG 57.477 50.000 7.64 9.02 0.00 3.51
5392 6732 1.474330 TTATCTGAGGCGCTGTCTGA 58.526 50.000 7.64 14.18 0.00 3.27
5393 6733 1.474330 TATCTGAGGCGCTGTCTGAA 58.526 50.000 18.50 9.38 0.00 3.02
5394 6734 0.829333 ATCTGAGGCGCTGTCTGAAT 59.171 50.000 18.50 8.86 0.00 2.57
5395 6735 1.474330 TCTGAGGCGCTGTCTGAATA 58.526 50.000 7.64 0.00 0.00 1.75
5436 6799 4.393062 ACATTCAACTGAGATAACAAGCCG 59.607 41.667 0.00 0.00 0.00 5.52
5437 6800 2.346803 TCAACTGAGATAACAAGCCGC 58.653 47.619 0.00 0.00 0.00 6.53
5438 6801 1.398390 CAACTGAGATAACAAGCCGCC 59.602 52.381 0.00 0.00 0.00 6.13
5442 6805 0.861837 GAGATAACAAGCCGCCATCG 59.138 55.000 0.00 0.00 0.00 3.84
5447 6810 3.554692 CAAGCCGCCATCGTCGTC 61.555 66.667 0.00 0.00 0.00 4.20
5453 6816 1.413767 CCGCCATCGTCGTCAAGAAG 61.414 60.000 0.00 0.00 0.00 2.85
5463 6826 2.095718 GTCGTCAAGAAGCACCAAATCC 60.096 50.000 0.00 0.00 0.00 3.01
5466 6829 0.109132 CAAGAAGCACCAAATCCGGC 60.109 55.000 0.00 0.00 0.00 6.13
5517 6881 0.294304 CGCAACACAAAACAACAGCG 59.706 50.000 0.00 0.00 37.91 5.18
5526 6890 1.470051 AAACAACAGCGGAAACCACT 58.530 45.000 0.00 0.00 0.00 4.00
5530 6894 0.535102 AACAGCGGAAACCACTCCAG 60.535 55.000 0.00 0.00 34.91 3.86
5531 6895 1.071471 CAGCGGAAACCACTCCAGT 59.929 57.895 0.00 0.00 34.91 4.00
5532 6896 1.071471 AGCGGAAACCACTCCAGTG 59.929 57.895 0.00 0.00 45.23 3.66
5534 6898 1.071471 CGGAAACCACTCCAGTGCT 59.929 57.895 0.76 0.00 44.34 4.40
5535 6899 1.230635 CGGAAACCACTCCAGTGCTG 61.231 60.000 0.76 0.00 44.34 4.41
5536 6900 1.518903 GGAAACCACTCCAGTGCTGC 61.519 60.000 0.76 0.00 44.34 5.25
5537 6901 0.819259 GAAACCACTCCAGTGCTGCA 60.819 55.000 0.00 0.00 44.34 4.41
5539 6903 3.054503 CCACTCCAGTGCTGCAGC 61.055 66.667 31.89 31.89 44.34 5.25
5540 6904 3.420606 CACTCCAGTGCTGCAGCG 61.421 66.667 32.11 19.51 45.83 5.18
5541 6905 3.619767 ACTCCAGTGCTGCAGCGA 61.620 61.111 32.11 21.77 45.83 4.93
5543 6907 1.744368 CTCCAGTGCTGCAGCGATT 60.744 57.895 32.11 17.91 45.83 3.34
5547 6911 0.179197 CAGTGCTGCAGCGATTTCAG 60.179 55.000 32.11 14.31 45.83 3.02
5549 6913 2.277120 GCTGCAGCGATTTCAGCG 60.277 61.111 25.23 0.00 42.86 5.18
5556 6920 4.192000 CGATTTCAGCGCTGGAGT 57.808 55.556 35.36 25.96 0.00 3.85
5558 6922 0.459237 CGATTTCAGCGCTGGAGTCT 60.459 55.000 35.36 16.73 0.00 3.24
5559 6923 1.731720 GATTTCAGCGCTGGAGTCTT 58.268 50.000 35.36 14.31 0.00 3.01
5562 6926 0.392706 TTCAGCGCTGGAGTCTTCAA 59.607 50.000 35.36 17.82 0.00 2.69
5564 6928 0.601046 CAGCGCTGGAGTCTTCAACA 60.601 55.000 29.88 0.00 0.00 3.33
5565 6929 0.322975 AGCGCTGGAGTCTTCAACAT 59.677 50.000 10.39 0.00 0.00 2.71
5566 6930 1.160137 GCGCTGGAGTCTTCAACATT 58.840 50.000 0.00 0.00 0.00 2.71
5591 6987 0.738762 CTCATCAGGTGACACCAGCG 60.739 60.000 26.30 14.00 44.94 5.18
5698 7094 1.153061 CATCCCCTGCATGATGGCT 59.847 57.895 0.00 0.00 35.75 4.75
5877 7279 3.357079 CAGCCGAACCTGCCACAC 61.357 66.667 0.00 0.00 0.00 3.82
5878 7280 4.643387 AGCCGAACCTGCCACACC 62.643 66.667 0.00 0.00 0.00 4.16
5879 7281 4.947147 GCCGAACCTGCCACACCA 62.947 66.667 0.00 0.00 0.00 4.17
5880 7282 2.034066 CCGAACCTGCCACACCAT 59.966 61.111 0.00 0.00 0.00 3.55
5881 7283 2.040544 CCGAACCTGCCACACCATC 61.041 63.158 0.00 0.00 0.00 3.51
5882 7284 1.302431 CGAACCTGCCACACCATCA 60.302 57.895 0.00 0.00 0.00 3.07
5883 7285 1.300971 CGAACCTGCCACACCATCAG 61.301 60.000 0.00 0.00 0.00 2.90
5884 7286 0.036732 GAACCTGCCACACCATCAGA 59.963 55.000 0.00 0.00 0.00 3.27
5885 7287 0.037303 AACCTGCCACACCATCAGAG 59.963 55.000 0.00 0.00 0.00 3.35
5886 7288 1.077930 CCTGCCACACCATCAGAGG 60.078 63.158 0.00 0.00 0.00 3.69
5887 7289 1.556373 CCTGCCACACCATCAGAGGA 61.556 60.000 0.00 0.00 0.00 3.71
5888 7290 0.107800 CTGCCACACCATCAGAGGAG 60.108 60.000 0.00 0.00 0.00 3.69
5889 7291 1.451028 GCCACACCATCAGAGGAGC 60.451 63.158 0.00 0.00 0.00 4.70
5890 7292 1.908340 GCCACACCATCAGAGGAGCT 61.908 60.000 0.00 0.00 0.00 4.09
5891 7293 0.177604 CCACACCATCAGAGGAGCTC 59.822 60.000 4.71 4.71 0.00 4.09
5892 7294 0.900421 CACACCATCAGAGGAGCTCA 59.100 55.000 17.19 0.00 32.06 4.26
5893 7295 1.277273 CACACCATCAGAGGAGCTCAA 59.723 52.381 17.19 0.00 32.06 3.02
5894 7296 1.554160 ACACCATCAGAGGAGCTCAAG 59.446 52.381 17.19 1.73 32.06 3.02
5895 7297 1.829849 CACCATCAGAGGAGCTCAAGA 59.170 52.381 17.19 7.55 32.06 3.02
5896 7298 2.435069 CACCATCAGAGGAGCTCAAGAT 59.565 50.000 17.19 9.57 32.06 2.40
5897 7299 2.435069 ACCATCAGAGGAGCTCAAGATG 59.565 50.000 17.19 19.49 41.01 2.90
5898 7300 2.699321 CCATCAGAGGAGCTCAAGATGA 59.301 50.000 25.53 19.18 42.41 2.92
5899 7301 3.325425 CCATCAGAGGAGCTCAAGATGAT 59.675 47.826 25.53 20.17 42.41 2.45
5900 7302 4.561938 CCATCAGAGGAGCTCAAGATGATC 60.562 50.000 25.53 10.57 42.41 2.92
5901 7303 3.639952 TCAGAGGAGCTCAAGATGATCA 58.360 45.455 17.19 0.00 32.06 2.92
5902 7304 3.637694 TCAGAGGAGCTCAAGATGATCAG 59.362 47.826 17.19 0.00 32.06 2.90
5903 7305 2.366266 AGAGGAGCTCAAGATGATCAGC 59.634 50.000 17.19 1.78 32.06 4.26
5904 7306 1.417145 AGGAGCTCAAGATGATCAGCC 59.583 52.381 17.19 0.00 0.00 4.85
5905 7307 1.140452 GGAGCTCAAGATGATCAGCCA 59.860 52.381 17.19 0.00 0.00 4.75
5906 7308 2.421107 GGAGCTCAAGATGATCAGCCAA 60.421 50.000 17.19 0.00 0.00 4.52
5907 7309 2.613133 GAGCTCAAGATGATCAGCCAAC 59.387 50.000 9.40 0.00 0.00 3.77
5908 7310 1.674962 GCTCAAGATGATCAGCCAACC 59.325 52.381 7.49 0.00 0.00 3.77
5909 7311 2.942752 GCTCAAGATGATCAGCCAACCA 60.943 50.000 7.49 0.00 0.00 3.67
5910 7312 3.349927 CTCAAGATGATCAGCCAACCAA 58.650 45.455 7.49 0.00 0.00 3.67
5911 7313 3.349927 TCAAGATGATCAGCCAACCAAG 58.650 45.455 7.49 0.00 0.00 3.61
5912 7314 3.009363 TCAAGATGATCAGCCAACCAAGA 59.991 43.478 7.49 0.00 0.00 3.02
5913 7315 3.726557 AGATGATCAGCCAACCAAGAA 57.273 42.857 7.49 0.00 0.00 2.52
5914 7316 3.350833 AGATGATCAGCCAACCAAGAAC 58.649 45.455 7.49 0.00 0.00 3.01
5915 7317 2.655090 TGATCAGCCAACCAAGAACA 57.345 45.000 0.00 0.00 0.00 3.18
5916 7318 2.229792 TGATCAGCCAACCAAGAACAC 58.770 47.619 0.00 0.00 0.00 3.32
5917 7319 2.229792 GATCAGCCAACCAAGAACACA 58.770 47.619 0.00 0.00 0.00 3.72
5918 7320 2.136298 TCAGCCAACCAAGAACACAA 57.864 45.000 0.00 0.00 0.00 3.33
5919 7321 2.451490 TCAGCCAACCAAGAACACAAA 58.549 42.857 0.00 0.00 0.00 2.83
5920 7322 2.165437 TCAGCCAACCAAGAACACAAAC 59.835 45.455 0.00 0.00 0.00 2.93
5921 7323 2.166254 CAGCCAACCAAGAACACAAACT 59.834 45.455 0.00 0.00 0.00 2.66
5922 7324 3.380004 CAGCCAACCAAGAACACAAACTA 59.620 43.478 0.00 0.00 0.00 2.24
5923 7325 4.020543 AGCCAACCAAGAACACAAACTAA 58.979 39.130 0.00 0.00 0.00 2.24
5924 7326 4.097892 AGCCAACCAAGAACACAAACTAAG 59.902 41.667 0.00 0.00 0.00 2.18
5925 7327 4.736464 GCCAACCAAGAACACAAACTAAGG 60.736 45.833 0.00 0.00 0.00 2.69
5926 7328 4.642885 CCAACCAAGAACACAAACTAAGGA 59.357 41.667 0.00 0.00 0.00 3.36
5927 7329 5.126384 CCAACCAAGAACACAAACTAAGGAA 59.874 40.000 0.00 0.00 0.00 3.36
5928 7330 5.830000 ACCAAGAACACAAACTAAGGAAC 57.170 39.130 0.00 0.00 0.00 3.62
5929 7331 5.258051 ACCAAGAACACAAACTAAGGAACA 58.742 37.500 0.00 0.00 0.00 3.18
5930 7332 5.891551 ACCAAGAACACAAACTAAGGAACAT 59.108 36.000 0.00 0.00 0.00 2.71
5931 7333 6.183360 ACCAAGAACACAAACTAAGGAACATG 60.183 38.462 0.00 0.00 0.00 3.21
5932 7334 5.438761 AGAACACAAACTAAGGAACATGC 57.561 39.130 0.00 0.00 0.00 4.06
5933 7335 5.133221 AGAACACAAACTAAGGAACATGCT 58.867 37.500 0.00 0.00 0.00 3.79
5934 7336 4.836125 ACACAAACTAAGGAACATGCTG 57.164 40.909 0.00 0.00 0.00 4.41
5935 7337 3.569701 ACACAAACTAAGGAACATGCTGG 59.430 43.478 0.00 0.00 0.00 4.85
5936 7338 2.558359 ACAAACTAAGGAACATGCTGGC 59.442 45.455 0.00 0.00 0.00 4.85
5937 7339 1.839424 AACTAAGGAACATGCTGGCC 58.161 50.000 0.00 0.00 0.00 5.36
5938 7340 0.995024 ACTAAGGAACATGCTGGCCT 59.005 50.000 3.32 0.00 0.00 5.19
5939 7341 1.065126 ACTAAGGAACATGCTGGCCTC 60.065 52.381 3.32 0.00 0.00 4.70
5940 7342 0.107703 TAAGGAACATGCTGGCCTCG 60.108 55.000 3.32 0.00 0.00 4.63
5941 7343 1.841302 AAGGAACATGCTGGCCTCGA 61.841 55.000 3.32 0.00 0.00 4.04
5942 7344 1.153086 GGAACATGCTGGCCTCGAT 60.153 57.895 3.32 0.00 0.00 3.59
5943 7345 1.162800 GGAACATGCTGGCCTCGATC 61.163 60.000 3.32 0.00 0.00 3.69
5944 7346 0.179062 GAACATGCTGGCCTCGATCT 60.179 55.000 3.32 0.00 0.00 2.75
5945 7347 0.254178 AACATGCTGGCCTCGATCTT 59.746 50.000 3.32 0.00 0.00 2.40
5946 7348 0.463295 ACATGCTGGCCTCGATCTTG 60.463 55.000 3.32 0.00 0.00 3.02
5947 7349 1.147824 ATGCTGGCCTCGATCTTGG 59.852 57.895 3.32 0.00 0.00 3.61
5948 7350 1.630126 ATGCTGGCCTCGATCTTGGT 61.630 55.000 3.32 0.00 0.00 3.67
5949 7351 1.078143 GCTGGCCTCGATCTTGGTT 60.078 57.895 3.32 0.00 0.00 3.67
5950 7352 1.092345 GCTGGCCTCGATCTTGGTTC 61.092 60.000 3.32 0.00 0.00 3.62
5951 7353 0.539051 CTGGCCTCGATCTTGGTTCT 59.461 55.000 3.32 0.00 0.00 3.01
5952 7354 0.250234 TGGCCTCGATCTTGGTTCTG 59.750 55.000 3.32 0.00 0.00 3.02
5953 7355 0.537188 GGCCTCGATCTTGGTTCTGA 59.463 55.000 0.00 0.00 0.00 3.27
5954 7356 1.066143 GGCCTCGATCTTGGTTCTGAA 60.066 52.381 0.00 0.00 0.00 3.02
5955 7357 2.275318 GCCTCGATCTTGGTTCTGAAG 58.725 52.381 0.00 0.00 0.00 3.02
5956 7358 2.093973 GCCTCGATCTTGGTTCTGAAGA 60.094 50.000 0.00 0.00 34.00 2.87
5957 7359 3.617531 GCCTCGATCTTGGTTCTGAAGAA 60.618 47.826 0.00 0.00 33.22 2.52
5958 7360 4.569943 CCTCGATCTTGGTTCTGAAGAAA 58.430 43.478 0.00 0.00 35.58 2.52
5959 7361 5.181748 CCTCGATCTTGGTTCTGAAGAAAT 58.818 41.667 0.00 0.00 35.58 2.17
5960 7362 5.064452 CCTCGATCTTGGTTCTGAAGAAATG 59.936 44.000 0.00 0.00 35.58 2.32
5961 7363 5.551233 TCGATCTTGGTTCTGAAGAAATGT 58.449 37.500 0.00 0.00 35.58 2.71
5962 7364 5.409520 TCGATCTTGGTTCTGAAGAAATGTG 59.590 40.000 0.00 0.00 35.58 3.21
5963 7365 5.391310 CGATCTTGGTTCTGAAGAAATGTGG 60.391 44.000 0.00 0.00 35.58 4.17
5964 7366 4.144297 TCTTGGTTCTGAAGAAATGTGGG 58.856 43.478 0.00 0.00 35.58 4.61
5965 7367 2.238521 TGGTTCTGAAGAAATGTGGGC 58.761 47.619 0.00 0.00 35.58 5.36
5966 7368 1.200020 GGTTCTGAAGAAATGTGGGCG 59.800 52.381 0.00 0.00 35.58 6.13
5967 7369 1.200020 GTTCTGAAGAAATGTGGGCGG 59.800 52.381 0.00 0.00 35.58 6.13
5968 7370 0.400213 TCTGAAGAAATGTGGGCGGT 59.600 50.000 0.00 0.00 0.00 5.68
5969 7371 0.523072 CTGAAGAAATGTGGGCGGTG 59.477 55.000 0.00 0.00 0.00 4.94
5970 7372 0.893270 TGAAGAAATGTGGGCGGTGG 60.893 55.000 0.00 0.00 0.00 4.61
5971 7373 0.893727 GAAGAAATGTGGGCGGTGGT 60.894 55.000 0.00 0.00 0.00 4.16
5972 7374 0.469144 AAGAAATGTGGGCGGTGGTT 60.469 50.000 0.00 0.00 0.00 3.67
5973 7375 0.893727 AGAAATGTGGGCGGTGGTTC 60.894 55.000 0.00 0.00 0.00 3.62
5974 7376 2.195123 GAAATGTGGGCGGTGGTTCG 62.195 60.000 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.936279 ACTAACTAAGAGTGCATGTGTATGT 58.064 36.000 0.00 0.00 36.65 2.29
1 2 6.197282 CGACTAACTAAGAGTGCATGTGTATG 59.803 42.308 0.00 0.00 37.36 2.39
2 3 6.095021 TCGACTAACTAAGAGTGCATGTGTAT 59.905 38.462 0.00 0.00 0.00 2.29
4 5 4.217767 TCGACTAACTAAGAGTGCATGTGT 59.782 41.667 0.00 0.00 0.00 3.72
5 6 4.733850 TCGACTAACTAAGAGTGCATGTG 58.266 43.478 0.00 0.00 0.00 3.21
6 7 5.047943 AGTTCGACTAACTAAGAGTGCATGT 60.048 40.000 0.00 0.00 46.85 3.21
7 8 5.403246 AGTTCGACTAACTAAGAGTGCATG 58.597 41.667 0.00 0.00 46.85 4.06
8 9 5.646577 AGTTCGACTAACTAAGAGTGCAT 57.353 39.130 0.00 0.00 46.85 3.96
17 18 3.375299 GGCCGACTTAGTTCGACTAACTA 59.625 47.826 0.00 0.00 46.85 2.24
19 20 2.163211 AGGCCGACTTAGTTCGACTAAC 59.837 50.000 0.00 0.00 41.78 2.34
20 21 2.440409 AGGCCGACTTAGTTCGACTAA 58.560 47.619 0.00 7.10 41.78 2.24
21 22 2.119801 AGGCCGACTTAGTTCGACTA 57.880 50.000 0.00 0.00 41.78 2.59
22 23 2.119801 TAGGCCGACTTAGTTCGACT 57.880 50.000 0.00 0.53 41.78 4.18
100 102 9.844790 TCATCGATAAAATCATTATTTGGATGC 57.155 29.630 0.00 0.00 35.46 3.91
121 123 7.993821 AATTGTGTGTTATCTAGAGTCATCG 57.006 36.000 0.00 0.00 0.00 3.84
139 141 7.925993 TGTCTGTTACCTAAGTCAAAATTGTG 58.074 34.615 0.00 0.00 0.00 3.33
215 222 7.087409 TCTGTGATTTGCTAATGTTACATGG 57.913 36.000 0.00 0.00 0.00 3.66
270 282 3.679389 TCCATCCACTCAAAGCTCTTTC 58.321 45.455 0.00 0.00 0.00 2.62
358 370 2.017049 ACAGCCATTTGATTCGTAGGC 58.983 47.619 0.00 0.00 42.31 3.93
504 528 1.133792 AACCACTGGTTGGGTCTGAAG 60.134 52.381 12.97 0.00 45.22 3.02
554 578 3.729108 AGAGGTTTGATCCCTGATGAGA 58.271 45.455 0.00 0.00 30.60 3.27
575 599 4.555348 ATCGTTCCAAAGCGTTAAACAA 57.445 36.364 9.37 0.00 0.00 2.83
625 864 1.752501 ATCTTCGTCGCGAAATGCCG 61.753 55.000 12.06 10.50 45.23 5.69
633 872 2.949678 CCGTCCATCTTCGTCGCG 60.950 66.667 0.00 0.00 0.00 5.87
667 906 1.064825 TTCCACCTTTCCTCCTCACC 58.935 55.000 0.00 0.00 0.00 4.02
669 908 2.108250 CCTTTTCCACCTTTCCTCCTCA 59.892 50.000 0.00 0.00 0.00 3.86
701 940 4.162690 AGCGCTTCGGCCTAAGGG 62.163 66.667 24.74 24.74 41.13 3.95
702 941 2.586357 GAGCGCTTCGGCCTAAGG 60.586 66.667 13.26 9.57 37.76 2.69
703 942 2.167861 GTGAGCGCTTCGGCCTAAG 61.168 63.158 13.26 12.62 37.76 2.18
704 943 2.125673 GTGAGCGCTTCGGCCTAA 60.126 61.111 13.26 0.00 37.76 2.69
710 949 0.798776 AATGGAAAGTGAGCGCTTCG 59.201 50.000 13.26 0.00 0.00 3.79
720 962 2.562738 GCTGGGCTGTAAAATGGAAAGT 59.437 45.455 0.00 0.00 0.00 2.66
725 967 0.614415 TGGGCTGGGCTGTAAAATGG 60.614 55.000 0.00 0.00 0.00 3.16
764 1006 2.599973 GCAATAATTGTGCTCGCTTTGG 59.400 45.455 8.31 0.00 39.00 3.28
773 1015 2.939460 ACGGAAGGCAATAATTGTGC 57.061 45.000 7.27 7.27 41.45 4.57
787 1030 0.037975 GCGGTTTCCAGAGTACGGAA 60.038 55.000 0.00 0.00 40.81 4.30
798 1041 7.718525 TGGGATTATTATTTTTAGCGGTTTCC 58.281 34.615 0.00 0.00 0.00 3.13
802 1045 5.048991 CGCTGGGATTATTATTTTTAGCGGT 60.049 40.000 0.00 0.00 45.25 5.68
817 1093 0.037975 CTTTGCTTTGCGCTGGGATT 60.038 50.000 9.73 0.00 40.11 3.01
947 1229 3.636231 CAAGGGTCCGGTCCAGCA 61.636 66.667 19.75 0.00 0.00 4.41
1314 1611 2.751837 GTAGCAACAGCTGGGGGC 60.752 66.667 19.93 17.61 39.39 5.80
1317 1615 0.107654 GGTAGGTAGCAACAGCTGGG 60.108 60.000 19.93 11.05 39.39 4.45
1323 1621 0.416231 AGAGGGGGTAGGTAGCAACA 59.584 55.000 0.00 0.00 0.00 3.33
1324 1622 1.121378 GAGAGGGGGTAGGTAGCAAC 58.879 60.000 0.00 0.00 0.00 4.17
1325 1623 0.396695 CGAGAGGGGGTAGGTAGCAA 60.397 60.000 0.00 0.00 0.00 3.91
1326 1624 1.229359 CGAGAGGGGGTAGGTAGCA 59.771 63.158 0.00 0.00 0.00 3.49
1327 1625 2.201708 GCGAGAGGGGGTAGGTAGC 61.202 68.421 0.00 0.00 0.00 3.58
1329 1627 2.194056 CGCGAGAGGGGGTAGGTA 59.806 66.667 0.00 0.00 40.85 3.08
1330 1628 3.736224 TCGCGAGAGGGGGTAGGT 61.736 66.667 3.71 0.00 45.20 3.08
1345 1643 3.003689 AGAACCAAAAGCACACAGAATCG 59.996 43.478 0.00 0.00 0.00 3.34
1360 1658 5.182570 CAGCATCTGAATTCTGAAGAACCAA 59.817 40.000 17.62 0.00 33.22 3.67
1361 1659 4.698780 CAGCATCTGAATTCTGAAGAACCA 59.301 41.667 17.62 0.00 33.22 3.67
1362 1660 4.940046 TCAGCATCTGAATTCTGAAGAACC 59.060 41.667 17.62 3.14 37.57 3.62
1363 1661 5.642919 AGTCAGCATCTGAATTCTGAAGAAC 59.357 40.000 17.62 12.24 42.46 3.01
1364 1662 5.802465 AGTCAGCATCTGAATTCTGAAGAA 58.198 37.500 17.62 0.00 42.46 2.52
1366 1664 6.339730 AGTAGTCAGCATCTGAATTCTGAAG 58.660 40.000 17.62 14.56 42.46 3.02
1367 1665 6.291648 AGTAGTCAGCATCTGAATTCTGAA 57.708 37.500 17.62 0.00 42.46 3.02
1368 1666 5.929058 AGTAGTCAGCATCTGAATTCTGA 57.071 39.130 16.27 16.27 42.46 3.27
1369 1667 5.970140 CAGTAGTCAGCATCTGAATTCTG 57.030 43.478 13.46 13.46 43.26 3.02
1370 1668 5.659463 GACAGTAGTCAGCATCTGAATTCT 58.341 41.667 7.05 0.43 42.46 2.40
1384 1682 2.731976 CAGAAAACCGCAGACAGTAGTC 59.268 50.000 0.00 0.00 45.31 2.59
1386 1684 2.069273 CCAGAAAACCGCAGACAGTAG 58.931 52.381 0.00 0.00 0.00 2.57
1393 1691 0.798776 CTACAGCCAGAAAACCGCAG 59.201 55.000 0.00 0.00 0.00 5.18
1395 1693 1.502190 GCTACAGCCAGAAAACCGC 59.498 57.895 0.00 0.00 34.31 5.68
1564 1864 0.603569 GAGCGAAACTGTGAGGAGGA 59.396 55.000 0.00 0.00 0.00 3.71
1584 1884 2.593725 CGCCCATCTGCATCCAGG 60.594 66.667 0.00 0.00 39.61 4.45
1606 1918 1.649171 GACTCGGCGTTATGATATGCG 59.351 52.381 6.85 0.00 0.00 4.73
1610 1922 4.848562 ATTCAGACTCGGCGTTATGATA 57.151 40.909 6.85 0.92 0.00 2.15
1612 1924 3.119280 TGAATTCAGACTCGGCGTTATGA 60.119 43.478 6.85 5.62 0.00 2.15
1614 1926 3.187700 GTGAATTCAGACTCGGCGTTAT 58.812 45.455 8.80 0.00 0.00 1.89
1615 1927 2.029739 TGTGAATTCAGACTCGGCGTTA 60.030 45.455 8.80 0.00 0.00 3.18
1617 1929 0.317160 TGTGAATTCAGACTCGGCGT 59.683 50.000 8.80 0.00 0.00 5.68
1618 1930 0.716108 GTGTGAATTCAGACTCGGCG 59.284 55.000 24.39 0.00 37.20 6.46
1619 1931 0.716108 CGTGTGAATTCAGACTCGGC 59.284 55.000 27.31 8.30 37.92 5.54
1621 1933 0.363512 CGCGTGTGAATTCAGACTCG 59.636 55.000 26.68 26.68 40.78 4.18
1622 1934 0.716108 CCGCGTGTGAATTCAGACTC 59.284 55.000 27.31 20.98 37.92 3.36
1624 1936 1.132640 GCCGCGTGTGAATTCAGAC 59.867 57.895 22.43 22.43 36.86 3.51
1625 1937 0.673333 ATGCCGCGTGTGAATTCAGA 60.673 50.000 8.80 4.42 0.00 3.27
1632 1944 2.011540 TATAAACATGCCGCGTGTGA 57.988 45.000 18.84 10.56 33.54 3.58
1640 1952 5.362556 ACAGAATGCGATATAAACATGCC 57.637 39.130 0.00 0.00 42.53 4.40
1642 1954 6.017192 TGGGAACAGAATGCGATATAAACATG 60.017 38.462 0.00 0.00 42.53 3.21
1683 2000 2.901249 CCACCTTATTAGGACACACGG 58.099 52.381 4.40 0.00 45.05 4.94
1687 2004 2.973694 TCGCCACCTTATTAGGACAC 57.026 50.000 4.40 0.00 45.05 3.67
1710 2027 6.016024 AGCTTCTGAATTTACACTTTGCATCA 60.016 34.615 0.00 0.00 0.00 3.07
1711 2028 6.385033 AGCTTCTGAATTTACACTTTGCATC 58.615 36.000 0.00 0.00 0.00 3.91
1715 2032 7.864379 ACATTGAGCTTCTGAATTTACACTTTG 59.136 33.333 0.00 0.00 0.00 2.77
1723 2040 6.373774 CCTGACTACATTGAGCTTCTGAATTT 59.626 38.462 0.00 0.00 0.00 1.82
1779 2107 2.289010 TGCCTCATAGTCACGCATATGG 60.289 50.000 4.56 0.00 31.58 2.74
1899 2614 4.858965 AGGAGAGGCTGAAATTTGAGAT 57.141 40.909 9.00 0.00 0.00 2.75
1971 2686 5.699839 ACACATCTAACCATTTTCTTTCGC 58.300 37.500 0.00 0.00 0.00 4.70
2010 2807 6.047511 AGAGTTCAGATAAACAGTGCTGAT 57.952 37.500 6.17 0.00 37.25 2.90
2013 2810 5.858381 TCAAGAGTTCAGATAAACAGTGCT 58.142 37.500 0.00 0.00 0.00 4.40
2093 2890 4.070009 ACTGAAAATTCACCCCGTAACTC 58.930 43.478 0.00 0.00 32.90 3.01
2099 2896 2.884639 AGAACACTGAAAATTCACCCCG 59.115 45.455 0.00 0.00 32.90 5.73
2158 2955 3.866582 CAGGAGGCCGGGGATGTC 61.867 72.222 2.18 0.00 0.00 3.06
2159 2956 4.741239 ACAGGAGGCCGGGGATGT 62.741 66.667 2.18 0.00 0.00 3.06
2160 2957 3.406595 GAACAGGAGGCCGGGGATG 62.407 68.421 2.18 0.00 0.00 3.51
2161 2958 3.090532 GAACAGGAGGCCGGGGAT 61.091 66.667 2.18 0.00 0.00 3.85
2164 2961 3.072468 TACGAACAGGAGGCCGGG 61.072 66.667 2.18 0.00 0.00 5.73
2165 2962 1.885163 AACTACGAACAGGAGGCCGG 61.885 60.000 0.00 0.00 34.15 6.13
2166 2963 0.813184 TAACTACGAACAGGAGGCCG 59.187 55.000 0.00 0.00 34.15 6.13
2167 2964 3.118884 TGATTAACTACGAACAGGAGGCC 60.119 47.826 0.00 0.00 34.15 5.19
2168 2965 3.864003 GTGATTAACTACGAACAGGAGGC 59.136 47.826 0.00 0.00 34.15 4.70
2169 2966 5.068234 TGTGATTAACTACGAACAGGAGG 57.932 43.478 0.00 0.00 34.15 4.30
2170 2967 5.005779 GCATGTGATTAACTACGAACAGGAG 59.994 44.000 0.00 0.00 36.66 3.69
2171 2968 4.868171 GCATGTGATTAACTACGAACAGGA 59.132 41.667 0.00 0.00 0.00 3.86
2172 2969 4.034048 GGCATGTGATTAACTACGAACAGG 59.966 45.833 0.00 0.00 0.00 4.00
2173 2970 4.259810 CGGCATGTGATTAACTACGAACAG 60.260 45.833 0.00 0.00 0.00 3.16
2174 2971 3.615056 CGGCATGTGATTAACTACGAACA 59.385 43.478 0.00 0.00 0.00 3.18
2175 2972 3.000925 CCGGCATGTGATTAACTACGAAC 59.999 47.826 0.00 0.00 0.00 3.95
2176 2973 3.191669 CCGGCATGTGATTAACTACGAA 58.808 45.455 0.00 0.00 0.00 3.85
2177 2974 2.166870 ACCGGCATGTGATTAACTACGA 59.833 45.455 0.00 0.00 0.00 3.43
2178 2975 2.546778 ACCGGCATGTGATTAACTACG 58.453 47.619 0.00 0.00 0.00 3.51
2179 2976 4.189231 AGAACCGGCATGTGATTAACTAC 58.811 43.478 0.00 0.00 0.00 2.73
2180 2977 4.481368 AGAACCGGCATGTGATTAACTA 57.519 40.909 0.00 0.00 0.00 2.24
2181 2978 3.350219 AGAACCGGCATGTGATTAACT 57.650 42.857 0.00 0.00 0.00 2.24
2182 2979 4.434713 AAAGAACCGGCATGTGATTAAC 57.565 40.909 0.00 0.00 0.00 2.01
2183 2980 4.764823 AGAAAAGAACCGGCATGTGATTAA 59.235 37.500 0.00 0.00 0.00 1.40
2184 2981 4.331968 AGAAAAGAACCGGCATGTGATTA 58.668 39.130 0.00 0.00 0.00 1.75
2185 2982 3.157087 AGAAAAGAACCGGCATGTGATT 58.843 40.909 0.00 0.00 0.00 2.57
2186 2983 2.795329 AGAAAAGAACCGGCATGTGAT 58.205 42.857 0.00 0.00 0.00 3.06
2187 2984 2.270352 AGAAAAGAACCGGCATGTGA 57.730 45.000 0.00 0.00 0.00 3.58
2188 2985 3.074412 AGTAGAAAAGAACCGGCATGTG 58.926 45.455 0.00 0.00 0.00 3.21
2189 2986 3.074412 CAGTAGAAAAGAACCGGCATGT 58.926 45.455 0.00 0.00 0.00 3.21
2190 2987 3.074412 ACAGTAGAAAAGAACCGGCATG 58.926 45.455 0.00 0.00 0.00 4.06
2191 2988 3.074412 CACAGTAGAAAAGAACCGGCAT 58.926 45.455 0.00 0.00 0.00 4.40
2192 2989 2.158871 ACACAGTAGAAAAGAACCGGCA 60.159 45.455 0.00 0.00 0.00 5.69
2193 2990 2.479275 GACACAGTAGAAAAGAACCGGC 59.521 50.000 0.00 0.00 0.00 6.13
2194 2991 3.724374 TGACACAGTAGAAAAGAACCGG 58.276 45.455 0.00 0.00 0.00 5.28
2195 2992 5.924475 AATGACACAGTAGAAAAGAACCG 57.076 39.130 0.00 0.00 0.00 4.44
2196 2993 9.220767 AGAATAATGACACAGTAGAAAAGAACC 57.779 33.333 0.00 0.00 0.00 3.62
2208 3005 5.423015 ACTGCACCTAGAATAATGACACAG 58.577 41.667 0.00 0.00 0.00 3.66
2272 3069 7.745620 ACGAAAATGGAAAGTTCATAGAACT 57.254 32.000 6.58 6.58 0.00 3.01
2273 3070 8.690840 CAAACGAAAATGGAAAGTTCATAGAAC 58.309 33.333 1.77 1.77 0.00 3.01
2275 3072 6.861055 GCAAACGAAAATGGAAAGTTCATAGA 59.139 34.615 0.00 0.00 0.00 1.98
2276 3073 6.640499 TGCAAACGAAAATGGAAAGTTCATAG 59.360 34.615 0.00 0.00 0.00 2.23
2302 3104 6.627395 TGATCAACGGAACATAAAACAAGT 57.373 33.333 0.00 0.00 0.00 3.16
2316 3118 2.009774 GAACCAGTCCATGATCAACGG 58.990 52.381 0.00 3.57 0.00 4.44
2318 3120 4.798574 GTTTGAACCAGTCCATGATCAAC 58.201 43.478 0.00 0.00 35.56 3.18
2342 3144 7.261325 TCTTTCAGTACAGTTCAGATCTATGC 58.739 38.462 0.00 0.00 0.00 3.14
2355 3157 7.659390 AGACTCCAGAATTTTCTTTCAGTACAG 59.341 37.037 0.00 0.00 34.74 2.74
2396 3220 7.462856 CGGTAAAACAAGAACATGAGTCGATAG 60.463 40.741 0.00 0.00 0.00 2.08
2405 3229 5.768317 ACAATCCGGTAAAACAAGAACATG 58.232 37.500 0.00 0.00 0.00 3.21
2408 3232 5.823353 TCAACAATCCGGTAAAACAAGAAC 58.177 37.500 0.00 0.00 0.00 3.01
2410 3234 6.319152 TCTTTCAACAATCCGGTAAAACAAGA 59.681 34.615 0.00 0.00 0.00 3.02
2455 3279 6.597672 CAGAAGGGTGTTACTTATGTATGCAA 59.402 38.462 0.00 0.00 33.68 4.08
2475 3315 4.092116 ACAAGAGGAGAAAACCCAGAAG 57.908 45.455 0.00 0.00 0.00 2.85
2478 3318 3.243535 GCAAACAAGAGGAGAAAACCCAG 60.244 47.826 0.00 0.00 0.00 4.45
2490 3330 1.805345 CAGAGGCTCTGCAAACAAGAG 59.195 52.381 29.86 4.19 37.72 2.85
2535 3375 3.062042 CCACCGTAAAACAGACTACCAC 58.938 50.000 0.00 0.00 0.00 4.16
2579 3419 4.019321 CCCTAATGACCCCTACACCATATG 60.019 50.000 0.00 0.00 0.00 1.78
2603 3443 0.107508 AACTGTGCTGTGACTGCTGT 60.108 50.000 15.36 8.77 0.00 4.40
2604 3444 1.869774 TAACTGTGCTGTGACTGCTG 58.130 50.000 15.36 8.21 0.00 4.41
2605 3445 2.420642 CATAACTGTGCTGTGACTGCT 58.579 47.619 15.36 0.00 0.00 4.24
2606 3446 1.135859 GCATAACTGTGCTGTGACTGC 60.136 52.381 7.56 7.56 41.82 4.40
2607 3447 1.466167 GGCATAACTGTGCTGTGACTG 59.534 52.381 0.00 0.00 44.45 3.51
2608 3448 1.611673 GGGCATAACTGTGCTGTGACT 60.612 52.381 0.00 0.00 44.45 3.41
2609 3449 0.804989 GGGCATAACTGTGCTGTGAC 59.195 55.000 0.00 0.00 44.45 3.67
2610 3450 0.399833 TGGGCATAACTGTGCTGTGA 59.600 50.000 0.00 0.00 44.45 3.58
2611 3451 1.246649 TTGGGCATAACTGTGCTGTG 58.753 50.000 0.00 0.00 44.45 3.66
2625 3465 7.706607 GTCAAGGTATGAAGATTAATTTTGGGC 59.293 37.037 0.00 0.00 40.50 5.36
2636 3476 5.485353 TGAACAGAGGTCAAGGTATGAAGAT 59.515 40.000 0.00 0.00 40.50 2.40
2645 3485 6.633500 TTTTACAATGAACAGAGGTCAAGG 57.367 37.500 0.00 0.00 0.00 3.61
2651 3491 7.749539 AAAACGTTTTTACAATGAACAGAGG 57.250 32.000 20.26 0.00 0.00 3.69
2701 3542 5.415701 AGTGTGTTCCCATATCACAAATGAC 59.584 40.000 0.00 0.00 42.39 3.06
2732 3573 4.464597 AGCAAGGTGACAACAAAAGGTTAA 59.535 37.500 0.00 0.00 37.72 2.01
2735 3576 2.166254 CAGCAAGGTGACAACAAAAGGT 59.834 45.455 0.00 0.00 0.00 3.50
2754 3596 4.445452 ACAGAAAAATGCAGGCATACAG 57.555 40.909 7.26 0.56 35.31 2.74
2847 3693 2.104622 TGACTGGCTTGTTGATGACAGA 59.895 45.455 2.62 0.00 39.94 3.41
2848 3694 2.483106 CTGACTGGCTTGTTGATGACAG 59.517 50.000 0.00 0.00 39.94 3.51
2865 3711 4.319177 AGTCACTATTGCAAGGAACTGAC 58.681 43.478 4.94 10.65 40.86 3.51
2892 3738 6.100004 TGTAGAGCATTCTTTTCTAAGACCG 58.900 40.000 0.00 0.00 40.04 4.79
2952 3798 2.568509 TCCAGAAGATGATGTGTCTGCA 59.431 45.455 0.00 0.00 36.90 4.41
2982 3828 5.045942 TGTTGATAGGTAAAGCACATCCTCA 60.046 40.000 0.00 0.00 0.00 3.86
3017 3863 1.203287 GTGCCTTGAGAAATTGAGGGC 59.797 52.381 0.00 0.00 38.67 5.19
3153 4000 1.758936 CAGCATCCAGAAATGAGCCA 58.241 50.000 0.00 0.00 0.00 4.75
3192 4039 0.770166 TCATGTCCACCCCAAGTCCA 60.770 55.000 0.00 0.00 0.00 4.02
3204 4051 5.474578 TGCTAGGAACTGATATCATGTCC 57.525 43.478 20.12 20.12 41.52 4.02
3282 4129 3.560636 AAACTGATCCTCCCAATACCG 57.439 47.619 0.00 0.00 0.00 4.02
3319 4166 1.843851 TGGTGTTTCCTCTTGGTCTGT 59.156 47.619 0.00 0.00 37.07 3.41
3321 4168 2.127708 AGTGGTGTTTCCTCTTGGTCT 58.872 47.619 0.00 0.00 36.76 3.85
3330 4177 4.278170 TGATTGATGTCAAGTGGTGTTTCC 59.722 41.667 1.65 0.00 39.47 3.13
3333 4180 4.717877 TCTGATTGATGTCAAGTGGTGTT 58.282 39.130 1.65 0.00 39.47 3.32
3373 4220 6.777580 CCTAATTGTAAGCCAGGTAAATGGAT 59.222 38.462 0.00 0.00 43.57 3.41
3407 4254 2.170187 ACAGCAATGGACTTGGCAAAAA 59.830 40.909 0.00 0.00 35.25 1.94
3408 4255 1.761784 ACAGCAATGGACTTGGCAAAA 59.238 42.857 0.00 0.00 35.25 2.44
3409 4256 1.340889 GACAGCAATGGACTTGGCAAA 59.659 47.619 0.00 0.00 35.25 3.68
3450 4297 7.839907 TGGAAAACAAGAAATTATCCCAGATG 58.160 34.615 0.00 0.00 0.00 2.90
3451 4298 7.364144 GCTGGAAAACAAGAAATTATCCCAGAT 60.364 37.037 0.00 0.00 39.67 2.90
3452 4299 6.071391 GCTGGAAAACAAGAAATTATCCCAGA 60.071 38.462 0.00 0.00 39.67 3.86
3486 4333 0.179076 TGCCAGTGATGGTGATAGCG 60.179 55.000 0.00 0.00 0.00 4.26
3504 4351 9.650539 TCCATTATGTTATTTCCAACAACAATG 57.349 29.630 13.95 13.95 41.50 2.82
3513 4360 9.265862 ACTTCCAAATCCATTATGTTATTTCCA 57.734 29.630 0.00 0.00 0.00 3.53
3564 4411 3.370953 GGTCTGCCAAGTATGTGAAGGAT 60.371 47.826 0.00 0.00 34.09 3.24
3668 4519 6.928979 TGGAACTGAAAACGAGAAATTACA 57.071 33.333 0.00 0.00 0.00 2.41
3707 4558 3.204119 TCAGCGGCATGGCGATTG 61.204 61.111 41.46 34.02 38.18 2.67
3734 4585 3.380479 TCGTAGCAATATTCGAAGGGG 57.620 47.619 3.35 0.00 0.00 4.79
3988 4844 7.445945 GTTACATAATCTGAGCCTGTTCCTAT 58.554 38.462 0.00 0.00 0.00 2.57
4014 4870 2.191128 ATATCAAAGCCAGCGGGATC 57.809 50.000 7.23 0.00 35.59 3.36
4130 4986 5.412594 TCAATGGTAATGCAACAGAAGAGTC 59.587 40.000 0.00 0.00 0.00 3.36
4132 4988 5.634896 GTCAATGGTAATGCAACAGAAGAG 58.365 41.667 0.00 0.00 0.00 2.85
4232 5215 3.670625 TCTGGGGACGAAATTACAACAG 58.329 45.455 0.00 0.00 0.00 3.16
4236 5219 5.240121 GTTAGTTCTGGGGACGAAATTACA 58.760 41.667 0.00 0.00 0.00 2.41
4252 5235 0.323957 AGGCGGAGGTTGGTTAGTTC 59.676 55.000 0.00 0.00 0.00 3.01
4255 5238 0.036306 ACAAGGCGGAGGTTGGTTAG 59.964 55.000 0.00 0.00 0.00 2.34
4256 5239 0.475044 AACAAGGCGGAGGTTGGTTA 59.525 50.000 0.00 0.00 0.00 2.85
4274 5263 5.930837 ACCAAGATGACTTTGGTTTTGAA 57.069 34.783 3.92 0.00 35.58 2.69
4286 5275 4.574599 AGTGCTGAAAAACCAAGATGAC 57.425 40.909 0.00 0.00 0.00 3.06
4296 5285 5.689383 AAGAATTCGCTAGTGCTGAAAAA 57.311 34.783 0.00 0.00 36.17 1.94
4310 5299 6.165659 ACCGTCATAAGTGAAAAGAATTCG 57.834 37.500 0.00 0.00 35.80 3.34
4343 5335 4.523943 TGTGAAATGCCTAACTGAATTGCT 59.476 37.500 0.00 0.00 0.00 3.91
4381 5373 4.621068 ATTGTTCATACTGGCAATCACG 57.379 40.909 0.00 0.00 0.00 4.35
4396 5388 6.146021 CCCACTACAAAGATTTGCAATTGTTC 59.854 38.462 18.38 6.34 41.79 3.18
4412 5404 5.221762 ACAAGTAACTGTATGCCCACTACAA 60.222 40.000 0.00 0.00 0.00 2.41
4414 5406 4.828829 ACAAGTAACTGTATGCCCACTAC 58.171 43.478 0.00 0.00 0.00 2.73
4415 5407 4.775780 AGACAAGTAACTGTATGCCCACTA 59.224 41.667 0.00 0.00 0.00 2.74
4449 5441 8.964150 CATTGTTTCACAGCACATGATATATTG 58.036 33.333 0.00 0.00 0.00 1.90
4504 5496 5.683876 TTCAGATAGGCTATATCCCAAGC 57.316 43.478 7.08 0.00 38.03 4.01
4542 5534 9.167311 GCTTCCCACAATTAGGAATATACTATG 57.833 37.037 4.69 0.00 41.26 2.23
4543 5535 8.890472 TGCTTCCCACAATTAGGAATATACTAT 58.110 33.333 4.69 0.00 41.26 2.12
4545 5537 6.998673 GTGCTTCCCACAATTAGGAATATACT 59.001 38.462 4.69 0.00 44.06 2.12
4546 5538 7.203255 GTGCTTCCCACAATTAGGAATATAC 57.797 40.000 4.69 2.45 44.06 1.47
4563 5555 7.367285 TGTTAACAACTATTGAATGTGCTTCC 58.633 34.615 5.64 0.00 32.49 3.46
4741 6010 5.761003 TGCATGTTCACAGAACAAACATAG 58.239 37.500 15.54 4.71 40.63 2.23
4757 6026 2.083774 CGGTGTCATAACCTGCATGTT 58.916 47.619 12.17 12.17 38.14 2.71
4759 6028 2.022764 TCGGTGTCATAACCTGCATG 57.977 50.000 0.00 0.00 38.14 4.06
4824 6094 0.377905 GAGAGTAGTTCTCGGGCGTC 59.622 60.000 0.00 0.00 46.86 5.19
4930 6200 9.233232 GAGGAACACAAACATAAACAAAAGTAG 57.767 33.333 0.00 0.00 0.00 2.57
4939 6209 5.510520 GGCAATGGAGGAACACAAACATAAA 60.511 40.000 0.00 0.00 0.00 1.40
4941 6211 3.509575 GGCAATGGAGGAACACAAACATA 59.490 43.478 0.00 0.00 0.00 2.29
4951 6221 2.312741 AGAAGATTGGGCAATGGAGGAA 59.687 45.455 0.00 0.00 0.00 3.36
4964 6234 6.095860 TCACTCCAATGCCAATTAGAAGATTG 59.904 38.462 0.00 0.00 36.89 2.67
4965 6235 6.096001 GTCACTCCAATGCCAATTAGAAGATT 59.904 38.462 0.00 0.00 0.00 2.40
4979 6249 9.726232 CTAATTTACAATCATGTCACTCCAATG 57.274 33.333 0.00 0.00 41.05 2.82
4980 6250 9.466497 ACTAATTTACAATCATGTCACTCCAAT 57.534 29.630 0.00 0.00 41.05 3.16
5067 6350 8.226819 TGATCTAGACAGAATAGACGATTTGT 57.773 34.615 0.00 0.00 33.50 2.83
5128 6416 0.322975 CAGGGAAGCTACTGCACTGT 59.677 55.000 0.00 0.00 42.74 3.55
5129 6417 0.322975 ACAGGGAAGCTACTGCACTG 59.677 55.000 3.15 3.15 42.74 3.66
5132 6420 0.610174 CAGACAGGGAAGCTACTGCA 59.390 55.000 11.59 0.00 42.74 4.41
5133 6421 0.742635 GCAGACAGGGAAGCTACTGC 60.743 60.000 11.59 0.00 42.44 4.40
5185 6513 2.464157 CTGAAGTCAGAACCTGGGAC 57.536 55.000 1.88 0.00 46.59 4.46
5196 6524 5.997746 CCTTGTTTATTCCACTCTGAAGTCA 59.002 40.000 0.00 0.00 31.71 3.41
5237 6565 5.817816 CGGGAGTTAATTCTGCTTGTTATCT 59.182 40.000 0.00 0.00 0.00 1.98
5238 6566 5.007724 CCGGGAGTTAATTCTGCTTGTTATC 59.992 44.000 0.00 0.00 0.00 1.75
5280 6618 2.092968 TCACACTGCAATCCTGGGATAC 60.093 50.000 2.24 0.00 33.97 2.24
5281 6619 2.195727 TCACACTGCAATCCTGGGATA 58.804 47.619 2.24 0.00 33.97 2.59
5304 6642 8.321353 TGTTCTCCATAAGCTCTGAATCTTTTA 58.679 33.333 0.00 0.00 0.00 1.52
5329 6667 6.147581 GCACAGATTATTAGCATGTTCCATG 58.852 40.000 0.00 0.00 0.00 3.66
5360 6700 5.460419 CGCCTCAGATAATAGAAACTGTGTC 59.540 44.000 0.00 0.00 0.00 3.67
5388 6728 8.573035 GTTAACCATGTTCCTTGTTTATTCAGA 58.427 33.333 0.00 0.00 0.00 3.27
5389 6729 8.356657 TGTTAACCATGTTCCTTGTTTATTCAG 58.643 33.333 2.48 0.00 0.00 3.02
5390 6730 8.239038 TGTTAACCATGTTCCTTGTTTATTCA 57.761 30.769 2.48 0.00 0.00 2.57
5391 6731 9.705290 AATGTTAACCATGTTCCTTGTTTATTC 57.295 29.630 2.48 0.00 32.82 1.75
5392 6732 9.705290 GAATGTTAACCATGTTCCTTGTTTATT 57.295 29.630 2.48 0.00 32.82 1.40
5393 6733 8.865090 TGAATGTTAACCATGTTCCTTGTTTAT 58.135 29.630 2.48 0.00 32.82 1.40
5394 6734 8.239038 TGAATGTTAACCATGTTCCTTGTTTA 57.761 30.769 2.48 0.00 32.82 2.01
5395 6735 7.118496 TGAATGTTAACCATGTTCCTTGTTT 57.882 32.000 2.48 0.00 32.82 2.83
5436 6799 1.014044 TGCTTCTTGACGACGATGGC 61.014 55.000 0.00 0.00 0.00 4.40
5437 6800 0.716108 GTGCTTCTTGACGACGATGG 59.284 55.000 0.00 0.00 0.00 3.51
5438 6801 0.716108 GGTGCTTCTTGACGACGATG 59.284 55.000 0.00 0.00 0.00 3.84
5442 6805 2.095718 GGATTTGGTGCTTCTTGACGAC 60.096 50.000 0.00 0.00 0.00 4.34
5447 6810 0.109132 GCCGGATTTGGTGCTTCTTG 60.109 55.000 5.05 0.00 0.00 3.02
5453 6816 3.758931 GGTGGCCGGATTTGGTGC 61.759 66.667 5.05 0.00 0.00 5.01
5466 6829 0.681564 AGCACTACTCTCTCCGGTGG 60.682 60.000 0.00 0.00 0.00 4.61
5477 6840 3.134458 GTGCTTCAGTTTGAGCACTACT 58.866 45.455 18.25 0.00 42.58 2.57
5478 6841 2.096713 CGTGCTTCAGTTTGAGCACTAC 60.097 50.000 21.57 1.68 43.12 2.73
5479 6842 2.135139 CGTGCTTCAGTTTGAGCACTA 58.865 47.619 21.57 0.00 43.12 2.74
5526 6890 1.300971 GAAATCGCTGCAGCACTGGA 61.301 55.000 36.03 25.30 42.21 3.86
5530 6894 4.759564 CTGAAATCGCTGCAGCAC 57.240 55.556 36.03 21.01 42.21 4.40
5539 6903 0.459237 AGACTCCAGCGCTGAAATCG 60.459 55.000 38.06 20.86 0.00 3.34
5540 6904 1.663135 GAAGACTCCAGCGCTGAAATC 59.337 52.381 38.06 27.81 0.00 2.17
5541 6905 1.002430 TGAAGACTCCAGCGCTGAAAT 59.998 47.619 38.06 21.84 0.00 2.17
5543 6907 0.392706 TTGAAGACTCCAGCGCTGAA 59.607 50.000 38.06 19.63 0.00 3.02
5547 6911 1.160137 AATGTTGAAGACTCCAGCGC 58.840 50.000 0.00 0.00 0.00 5.92
5549 6913 4.978580 GTGAAAAATGTTGAAGACTCCAGC 59.021 41.667 0.00 0.00 0.00 4.85
5550 6914 6.038603 TGAGTGAAAAATGTTGAAGACTCCAG 59.961 38.462 0.00 0.00 0.00 3.86
5551 6915 5.885352 TGAGTGAAAAATGTTGAAGACTCCA 59.115 36.000 0.00 0.00 0.00 3.86
5553 6917 7.642669 TGATGAGTGAAAAATGTTGAAGACTC 58.357 34.615 0.00 0.00 0.00 3.36
5555 6919 6.860023 CCTGATGAGTGAAAAATGTTGAAGAC 59.140 38.462 0.00 0.00 0.00 3.01
5556 6920 6.547141 ACCTGATGAGTGAAAAATGTTGAAGA 59.453 34.615 0.00 0.00 0.00 2.87
5558 6922 6.320926 TCACCTGATGAGTGAAAAATGTTGAA 59.679 34.615 0.00 0.00 41.17 2.69
5559 6923 5.827267 TCACCTGATGAGTGAAAAATGTTGA 59.173 36.000 0.00 0.00 41.17 3.18
5562 6926 5.009010 GTGTCACCTGATGAGTGAAAAATGT 59.991 40.000 0.00 0.00 45.37 2.71
5564 6928 4.520492 GGTGTCACCTGATGAGTGAAAAAT 59.480 41.667 15.22 0.00 45.37 1.82
5565 6929 3.882888 GGTGTCACCTGATGAGTGAAAAA 59.117 43.478 15.22 0.00 45.37 1.94
5566 6930 3.118075 TGGTGTCACCTGATGAGTGAAAA 60.118 43.478 22.56 0.00 45.37 2.29
5874 7276 1.554160 CTTGAGCTCCTCTGATGGTGT 59.446 52.381 12.15 0.00 0.00 4.16
5875 7277 1.829849 TCTTGAGCTCCTCTGATGGTG 59.170 52.381 12.15 0.00 0.00 4.17
5876 7278 2.244486 TCTTGAGCTCCTCTGATGGT 57.756 50.000 12.15 0.00 0.00 3.55
5877 7279 2.699321 TCATCTTGAGCTCCTCTGATGG 59.301 50.000 22.92 12.44 39.70 3.51
5878 7280 4.039366 TGATCATCTTGAGCTCCTCTGATG 59.961 45.833 12.15 17.36 40.11 3.07
5879 7281 4.224762 TGATCATCTTGAGCTCCTCTGAT 58.775 43.478 12.15 13.57 33.24 2.90
5880 7282 3.637694 CTGATCATCTTGAGCTCCTCTGA 59.362 47.826 12.15 9.33 33.24 3.27
5881 7283 3.800949 GCTGATCATCTTGAGCTCCTCTG 60.801 52.174 12.15 3.87 33.24 3.35
5882 7284 2.366266 GCTGATCATCTTGAGCTCCTCT 59.634 50.000 12.15 0.00 33.24 3.69
5883 7285 2.548493 GGCTGATCATCTTGAGCTCCTC 60.548 54.545 12.15 0.00 33.24 3.71
5884 7286 1.417145 GGCTGATCATCTTGAGCTCCT 59.583 52.381 12.15 0.00 33.24 3.69
5885 7287 1.140452 TGGCTGATCATCTTGAGCTCC 59.860 52.381 12.15 0.00 33.24 4.70
5886 7288 2.613133 GTTGGCTGATCATCTTGAGCTC 59.387 50.000 6.82 6.82 33.24 4.09
5887 7289 2.641305 GTTGGCTGATCATCTTGAGCT 58.359 47.619 0.00 0.00 33.24 4.09
5888 7290 1.674962 GGTTGGCTGATCATCTTGAGC 59.325 52.381 0.00 0.00 32.56 4.26
5889 7291 2.995283 TGGTTGGCTGATCATCTTGAG 58.005 47.619 0.00 0.00 0.00 3.02
5890 7292 3.009363 TCTTGGTTGGCTGATCATCTTGA 59.991 43.478 0.00 0.00 0.00 3.02
5891 7293 3.349927 TCTTGGTTGGCTGATCATCTTG 58.650 45.455 0.00 0.00 0.00 3.02
5892 7294 3.726557 TCTTGGTTGGCTGATCATCTT 57.273 42.857 0.00 0.00 0.00 2.40
5893 7295 3.245016 TGTTCTTGGTTGGCTGATCATCT 60.245 43.478 0.00 0.00 0.00 2.90
5894 7296 3.084039 TGTTCTTGGTTGGCTGATCATC 58.916 45.455 0.00 0.00 0.00 2.92
5895 7297 2.821969 GTGTTCTTGGTTGGCTGATCAT 59.178 45.455 0.00 0.00 0.00 2.45
5896 7298 2.229792 GTGTTCTTGGTTGGCTGATCA 58.770 47.619 0.00 0.00 0.00 2.92
5897 7299 2.229792 TGTGTTCTTGGTTGGCTGATC 58.770 47.619 0.00 0.00 0.00 2.92
5898 7300 2.363306 TGTGTTCTTGGTTGGCTGAT 57.637 45.000 0.00 0.00 0.00 2.90
5899 7301 2.136298 TTGTGTTCTTGGTTGGCTGA 57.864 45.000 0.00 0.00 0.00 4.26
5900 7302 2.166254 AGTTTGTGTTCTTGGTTGGCTG 59.834 45.455 0.00 0.00 0.00 4.85
5901 7303 2.456577 AGTTTGTGTTCTTGGTTGGCT 58.543 42.857 0.00 0.00 0.00 4.75
5902 7304 2.959507 AGTTTGTGTTCTTGGTTGGC 57.040 45.000 0.00 0.00 0.00 4.52
5903 7305 4.642885 TCCTTAGTTTGTGTTCTTGGTTGG 59.357 41.667 0.00 0.00 0.00 3.77
5904 7306 5.828299 TCCTTAGTTTGTGTTCTTGGTTG 57.172 39.130 0.00 0.00 0.00 3.77
5905 7307 5.712917 TGTTCCTTAGTTTGTGTTCTTGGTT 59.287 36.000 0.00 0.00 0.00 3.67
5906 7308 5.258051 TGTTCCTTAGTTTGTGTTCTTGGT 58.742 37.500 0.00 0.00 0.00 3.67
5907 7309 5.828299 TGTTCCTTAGTTTGTGTTCTTGG 57.172 39.130 0.00 0.00 0.00 3.61
5908 7310 5.687285 GCATGTTCCTTAGTTTGTGTTCTTG 59.313 40.000 0.00 0.00 0.00 3.02
5909 7311 5.594317 AGCATGTTCCTTAGTTTGTGTTCTT 59.406 36.000 0.00 0.00 0.00 2.52
5910 7312 5.009010 CAGCATGTTCCTTAGTTTGTGTTCT 59.991 40.000 0.00 0.00 0.00 3.01
5911 7313 5.215160 CAGCATGTTCCTTAGTTTGTGTTC 58.785 41.667 0.00 0.00 0.00 3.18
5912 7314 4.037923 CCAGCATGTTCCTTAGTTTGTGTT 59.962 41.667 0.00 0.00 0.00 3.32
5913 7315 3.569701 CCAGCATGTTCCTTAGTTTGTGT 59.430 43.478 0.00 0.00 0.00 3.72
5914 7316 3.612479 GCCAGCATGTTCCTTAGTTTGTG 60.612 47.826 0.00 0.00 0.00 3.33
5915 7317 2.558359 GCCAGCATGTTCCTTAGTTTGT 59.442 45.455 0.00 0.00 0.00 2.83
5916 7318 2.094545 GGCCAGCATGTTCCTTAGTTTG 60.095 50.000 0.00 0.00 0.00 2.93
5917 7319 2.171003 GGCCAGCATGTTCCTTAGTTT 58.829 47.619 0.00 0.00 0.00 2.66
5918 7320 1.355720 AGGCCAGCATGTTCCTTAGTT 59.644 47.619 5.01 0.00 34.11 2.24
5919 7321 0.995024 AGGCCAGCATGTTCCTTAGT 59.005 50.000 5.01 0.00 34.11 2.24
5920 7322 1.673168 GAGGCCAGCATGTTCCTTAG 58.327 55.000 5.01 0.00 37.31 2.18
5921 7323 0.107703 CGAGGCCAGCATGTTCCTTA 60.108 55.000 5.01 0.00 37.31 2.69
5922 7324 1.377725 CGAGGCCAGCATGTTCCTT 60.378 57.895 5.01 0.00 37.31 3.36
5923 7325 1.630126 ATCGAGGCCAGCATGTTCCT 61.630 55.000 5.01 0.00 39.43 3.36
5924 7326 1.153086 ATCGAGGCCAGCATGTTCC 60.153 57.895 5.01 0.00 0.00 3.62
5925 7327 0.179062 AGATCGAGGCCAGCATGTTC 60.179 55.000 5.01 0.00 0.00 3.18
5926 7328 0.254178 AAGATCGAGGCCAGCATGTT 59.746 50.000 5.01 0.00 0.00 2.71
5927 7329 0.463295 CAAGATCGAGGCCAGCATGT 60.463 55.000 5.01 0.00 0.00 3.21
5928 7330 1.164662 CCAAGATCGAGGCCAGCATG 61.165 60.000 5.01 0.00 0.00 4.06
5929 7331 1.147824 CCAAGATCGAGGCCAGCAT 59.852 57.895 5.01 0.00 0.00 3.79
5930 7332 1.841302 AACCAAGATCGAGGCCAGCA 61.841 55.000 5.01 0.00 0.00 4.41
5931 7333 1.078143 AACCAAGATCGAGGCCAGC 60.078 57.895 5.01 0.00 0.00 4.85
5932 7334 0.539051 AGAACCAAGATCGAGGCCAG 59.461 55.000 5.01 0.00 0.00 4.85
5933 7335 0.250234 CAGAACCAAGATCGAGGCCA 59.750 55.000 5.01 0.00 0.00 5.36
5934 7336 0.537188 TCAGAACCAAGATCGAGGCC 59.463 55.000 0.00 0.00 0.00 5.19
5935 7337 2.093973 TCTTCAGAACCAAGATCGAGGC 60.094 50.000 6.41 0.00 0.00 4.70
5936 7338 3.876274 TCTTCAGAACCAAGATCGAGG 57.124 47.619 5.09 5.09 0.00 4.63
5937 7339 5.641209 ACATTTCTTCAGAACCAAGATCGAG 59.359 40.000 0.00 0.00 33.13 4.04
5938 7340 5.409520 CACATTTCTTCAGAACCAAGATCGA 59.590 40.000 0.00 0.00 33.13 3.59
5939 7341 5.391310 CCACATTTCTTCAGAACCAAGATCG 60.391 44.000 0.00 0.00 33.13 3.69
5940 7342 5.105997 CCCACATTTCTTCAGAACCAAGATC 60.106 44.000 0.00 0.00 33.13 2.75
5941 7343 4.768968 CCCACATTTCTTCAGAACCAAGAT 59.231 41.667 0.00 0.00 33.13 2.40
5942 7344 4.144297 CCCACATTTCTTCAGAACCAAGA 58.856 43.478 0.00 0.00 33.13 3.02
5943 7345 3.305608 GCCCACATTTCTTCAGAACCAAG 60.306 47.826 0.00 0.00 33.13 3.61
5944 7346 2.627699 GCCCACATTTCTTCAGAACCAA 59.372 45.455 0.00 0.00 33.13 3.67
5945 7347 2.238521 GCCCACATTTCTTCAGAACCA 58.761 47.619 0.00 0.00 33.13 3.67
5946 7348 1.200020 CGCCCACATTTCTTCAGAACC 59.800 52.381 0.00 0.00 33.13 3.62
5947 7349 1.200020 CCGCCCACATTTCTTCAGAAC 59.800 52.381 0.00 0.00 33.13 3.01
5948 7350 1.202879 ACCGCCCACATTTCTTCAGAA 60.203 47.619 0.00 0.00 0.00 3.02
5949 7351 0.400213 ACCGCCCACATTTCTTCAGA 59.600 50.000 0.00 0.00 0.00 3.27
5950 7352 0.523072 CACCGCCCACATTTCTTCAG 59.477 55.000 0.00 0.00 0.00 3.02
5951 7353 0.893270 CCACCGCCCACATTTCTTCA 60.893 55.000 0.00 0.00 0.00 3.02
5952 7354 0.893727 ACCACCGCCCACATTTCTTC 60.894 55.000 0.00 0.00 0.00 2.87
5953 7355 0.469144 AACCACCGCCCACATTTCTT 60.469 50.000 0.00 0.00 0.00 2.52
5954 7356 0.893727 GAACCACCGCCCACATTTCT 60.894 55.000 0.00 0.00 0.00 2.52
5955 7357 1.584495 GAACCACCGCCCACATTTC 59.416 57.895 0.00 0.00 0.00 2.17
5956 7358 2.265182 CGAACCACCGCCCACATTT 61.265 57.895 0.00 0.00 0.00 2.32
5957 7359 2.671619 CGAACCACCGCCCACATT 60.672 61.111 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.