Multiple sequence alignment - TraesCS2A01G066400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G066400 | chr2A | 100.000 | 3310 | 0 | 0 | 1 | 3310 | 29932771 | 29936080 | 0.000000e+00 | 6113.0 |
1 | TraesCS2A01G066400 | chr2A | 100.000 | 2147 | 0 | 0 | 1 | 2147 | 29957579 | 29955433 | 0.000000e+00 | 3965.0 |
2 | TraesCS2A01G066400 | chr2A | 85.910 | 731 | 100 | 3 | 1060 | 1790 | 31597561 | 31598288 | 0.000000e+00 | 776.0 |
3 | TraesCS2A01G066400 | chr2A | 84.804 | 204 | 31 | 0 | 1943 | 2146 | 31598721 | 31598924 | 4.330000e-49 | 206.0 |
4 | TraesCS2A01G066400 | chr2A | 82.653 | 196 | 22 | 10 | 779 | 970 | 29922620 | 29922807 | 2.640000e-36 | 163.0 |
5 | TraesCS2A01G066400 | chr2D | 93.719 | 1401 | 47 | 23 | 779 | 2146 | 27824753 | 27823361 | 0.000000e+00 | 2061.0 |
6 | TraesCS2A01G066400 | chr2D | 86.676 | 728 | 94 | 3 | 1063 | 1790 | 29285121 | 29285845 | 0.000000e+00 | 804.0 |
7 | TraesCS2A01G066400 | chr2D | 90.877 | 285 | 24 | 2 | 3026 | 3310 | 27820599 | 27820317 | 6.700000e-102 | 381.0 |
8 | TraesCS2A01G066400 | chr2D | 93.607 | 219 | 12 | 1 | 551 | 769 | 306134553 | 306134337 | 3.190000e-85 | 326.0 |
9 | TraesCS2A01G066400 | chr2D | 93.785 | 177 | 9 | 2 | 2509 | 2685 | 516708477 | 516708303 | 7.040000e-67 | 265.0 |
10 | TraesCS2A01G066400 | chr2D | 78.554 | 401 | 73 | 10 | 1397 | 1792 | 535621811 | 535621419 | 5.480000e-63 | 252.0 |
11 | TraesCS2A01G066400 | chr2D | 85.876 | 177 | 25 | 0 | 1943 | 2119 | 29286239 | 29286415 | 4.360000e-44 | 189.0 |
12 | TraesCS2A01G066400 | chr2D | 93.421 | 76 | 5 | 0 | 2877 | 2952 | 27820958 | 27820883 | 2.700000e-21 | 113.0 |
13 | TraesCS2A01G066400 | chr2B | 91.530 | 1464 | 66 | 9 | 819 | 2242 | 44109861 | 44108416 | 0.000000e+00 | 1964.0 |
14 | TraesCS2A01G066400 | chr2B | 90.358 | 1369 | 73 | 31 | 810 | 2146 | 44027544 | 44028885 | 0.000000e+00 | 1742.0 |
15 | TraesCS2A01G066400 | chr2B | 85.948 | 733 | 97 | 6 | 1063 | 1790 | 47230962 | 47231693 | 0.000000e+00 | 778.0 |
16 | TraesCS2A01G066400 | chr2B | 85.656 | 732 | 97 | 7 | 1063 | 1790 | 47250231 | 47249504 | 0.000000e+00 | 763.0 |
17 | TraesCS2A01G066400 | chr2B | 93.151 | 219 | 13 | 1 | 551 | 769 | 113951861 | 113952077 | 1.480000e-83 | 320.0 |
18 | TraesCS2A01G066400 | chr2B | 93.714 | 175 | 11 | 0 | 2503 | 2677 | 648961559 | 648961733 | 2.530000e-66 | 263.0 |
19 | TraesCS2A01G066400 | chr2B | 92.391 | 184 | 13 | 1 | 2504 | 2687 | 174794992 | 174794810 | 9.110000e-66 | 261.0 |
20 | TraesCS2A01G066400 | chr2B | 87.097 | 186 | 24 | 0 | 1961 | 2146 | 47249104 | 47248919 | 9.310000e-51 | 211.0 |
21 | TraesCS2A01G066400 | chr2B | 94.488 | 127 | 6 | 1 | 435 | 560 | 234509205 | 234509331 | 9.370000e-46 | 195.0 |
22 | TraesCS2A01G066400 | chr2B | 93.162 | 117 | 7 | 1 | 237 | 352 | 602272713 | 602272829 | 1.580000e-38 | 171.0 |
23 | TraesCS2A01G066400 | chrUn | 93.151 | 219 | 13 | 1 | 551 | 769 | 45085236 | 45085452 | 1.480000e-83 | 320.0 |
24 | TraesCS2A01G066400 | chrUn | 93.151 | 219 | 13 | 1 | 551 | 769 | 231545883 | 231546099 | 1.480000e-83 | 320.0 |
25 | TraesCS2A01G066400 | chrUn | 94.488 | 127 | 6 | 1 | 435 | 560 | 182438771 | 182438645 | 9.370000e-46 | 195.0 |
26 | TraesCS2A01G066400 | chr7D | 93.151 | 219 | 13 | 1 | 551 | 769 | 382044518 | 382044302 | 1.480000e-83 | 320.0 |
27 | TraesCS2A01G066400 | chr7D | 74.542 | 601 | 131 | 14 | 1169 | 1761 | 487739148 | 487739734 | 3.300000e-60 | 243.0 |
28 | TraesCS2A01G066400 | chr7D | 94.488 | 127 | 6 | 1 | 435 | 560 | 449411573 | 449411447 | 9.370000e-46 | 195.0 |
29 | TraesCS2A01G066400 | chr7D | 92.500 | 40 | 3 | 0 | 2717 | 2756 | 24331087 | 24331126 | 1.280000e-04 | 58.4 |
30 | TraesCS2A01G066400 | chr7D | 94.118 | 34 | 2 | 0 | 2717 | 2750 | 575150172 | 575150205 | 6.000000e-03 | 52.8 |
31 | TraesCS2A01G066400 | chr5B | 93.151 | 219 | 13 | 1 | 551 | 769 | 130595129 | 130595345 | 1.480000e-83 | 320.0 |
32 | TraesCS2A01G066400 | chr5B | 93.162 | 117 | 8 | 0 | 237 | 353 | 339452267 | 339452383 | 4.390000e-39 | 172.0 |
33 | TraesCS2A01G066400 | chr5B | 92.308 | 117 | 9 | 0 | 235 | 351 | 139308620 | 139308504 | 2.040000e-37 | 167.0 |
34 | TraesCS2A01G066400 | chr3A | 93.151 | 219 | 13 | 1 | 551 | 769 | 122220726 | 122220942 | 1.480000e-83 | 320.0 |
35 | TraesCS2A01G066400 | chr3A | 94.488 | 127 | 6 | 1 | 435 | 560 | 122213078 | 122213204 | 9.370000e-46 | 195.0 |
36 | TraesCS2A01G066400 | chr1B | 93.151 | 219 | 13 | 1 | 551 | 769 | 619175044 | 619175260 | 1.480000e-83 | 320.0 |
37 | TraesCS2A01G066400 | chr1B | 94.488 | 127 | 6 | 1 | 435 | 560 | 583577686 | 583577812 | 9.370000e-46 | 195.0 |
38 | TraesCS2A01G066400 | chr1B | 90.000 | 50 | 5 | 0 | 28 | 77 | 3975877 | 3975926 | 7.670000e-07 | 65.8 |
39 | TraesCS2A01G066400 | chr6A | 95.294 | 170 | 8 | 0 | 2505 | 2674 | 105041906 | 105042075 | 1.510000e-68 | 270.0 |
40 | TraesCS2A01G066400 | chr6A | 93.714 | 175 | 11 | 0 | 2506 | 2680 | 300069685 | 300069511 | 2.530000e-66 | 263.0 |
41 | TraesCS2A01G066400 | chr6A | 73.171 | 328 | 78 | 7 | 1805 | 2127 | 186995089 | 186995411 | 3.490000e-20 | 110.0 |
42 | TraesCS2A01G066400 | chr6A | 79.487 | 117 | 20 | 4 | 2677 | 2791 | 460806212 | 460806098 | 2.740000e-11 | 80.5 |
43 | TraesCS2A01G066400 | chr6A | 100.000 | 31 | 0 | 0 | 2720 | 2750 | 50111851 | 50111821 | 1.280000e-04 | 58.4 |
44 | TraesCS2A01G066400 | chr4B | 95.266 | 169 | 8 | 0 | 2508 | 2676 | 389466777 | 389466945 | 5.440000e-68 | 268.0 |
45 | TraesCS2A01G066400 | chr4B | 92.308 | 117 | 9 | 0 | 237 | 353 | 432814147 | 432814263 | 2.040000e-37 | 167.0 |
46 | TraesCS2A01G066400 | chr5D | 93.714 | 175 | 11 | 0 | 2503 | 2677 | 354096534 | 354096708 | 2.530000e-66 | 263.0 |
47 | TraesCS2A01G066400 | chr5D | 94.286 | 35 | 2 | 0 | 2713 | 2747 | 81152775 | 81152809 | 2.000000e-03 | 54.7 |
48 | TraesCS2A01G066400 | chr4D | 93.714 | 175 | 11 | 0 | 2506 | 2680 | 330859847 | 330859673 | 2.530000e-66 | 263.0 |
49 | TraesCS2A01G066400 | chr4D | 94.488 | 127 | 6 | 1 | 435 | 560 | 398053948 | 398054074 | 9.370000e-46 | 195.0 |
50 | TraesCS2A01G066400 | chr4D | 93.220 | 118 | 8 | 0 | 237 | 354 | 483475949 | 483475832 | 1.220000e-39 | 174.0 |
51 | TraesCS2A01G066400 | chr3D | 93.714 | 175 | 11 | 0 | 2506 | 2680 | 171545175 | 171545001 | 2.530000e-66 | 263.0 |
52 | TraesCS2A01G066400 | chr3D | 94.488 | 127 | 6 | 1 | 435 | 560 | 478068682 | 478068808 | 9.370000e-46 | 195.0 |
53 | TraesCS2A01G066400 | chr7B | 94.488 | 127 | 6 | 1 | 435 | 560 | 742911510 | 742911384 | 9.370000e-46 | 195.0 |
54 | TraesCS2A01G066400 | chr1A | 93.966 | 116 | 7 | 0 | 237 | 352 | 542286701 | 542286816 | 3.390000e-40 | 176.0 |
55 | TraesCS2A01G066400 | chr3B | 91.870 | 123 | 9 | 1 | 237 | 358 | 822867825 | 822867947 | 1.580000e-38 | 171.0 |
56 | TraesCS2A01G066400 | chr6B | 92.308 | 117 | 9 | 0 | 237 | 353 | 149486330 | 149486446 | 2.040000e-37 | 167.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G066400 | chr2A | 29932771 | 29936080 | 3309 | False | 6113.000000 | 6113 | 100.000000 | 1 | 3310 | 1 | chr2A.!!$F2 | 3309 |
1 | TraesCS2A01G066400 | chr2A | 29955433 | 29957579 | 2146 | True | 3965.000000 | 3965 | 100.000000 | 1 | 2147 | 1 | chr2A.!!$R1 | 2146 |
2 | TraesCS2A01G066400 | chr2A | 31597561 | 31598924 | 1363 | False | 491.000000 | 776 | 85.357000 | 1060 | 2146 | 2 | chr2A.!!$F3 | 1086 |
3 | TraesCS2A01G066400 | chr2D | 27820317 | 27824753 | 4436 | True | 851.666667 | 2061 | 92.672333 | 779 | 3310 | 3 | chr2D.!!$R4 | 2531 |
4 | TraesCS2A01G066400 | chr2D | 29285121 | 29286415 | 1294 | False | 496.500000 | 804 | 86.276000 | 1063 | 2119 | 2 | chr2D.!!$F1 | 1056 |
5 | TraesCS2A01G066400 | chr2B | 44108416 | 44109861 | 1445 | True | 1964.000000 | 1964 | 91.530000 | 819 | 2242 | 1 | chr2B.!!$R1 | 1423 |
6 | TraesCS2A01G066400 | chr2B | 44027544 | 44028885 | 1341 | False | 1742.000000 | 1742 | 90.358000 | 810 | 2146 | 1 | chr2B.!!$F1 | 1336 |
7 | TraesCS2A01G066400 | chr2B | 47230962 | 47231693 | 731 | False | 778.000000 | 778 | 85.948000 | 1063 | 1790 | 1 | chr2B.!!$F2 | 727 |
8 | TraesCS2A01G066400 | chr2B | 47248919 | 47250231 | 1312 | True | 487.000000 | 763 | 86.376500 | 1063 | 2146 | 2 | chr2B.!!$R3 | 1083 |
9 | TraesCS2A01G066400 | chr7D | 487739148 | 487739734 | 586 | False | 243.000000 | 243 | 74.542000 | 1169 | 1761 | 1 | chr7D.!!$F2 | 592 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2148 | 2521 | 0.685785 | CTGGCTCCAGGCTCTAGTCA | 60.686 | 60.0 | 8.03 | 0.49 | 40.17 | 3.41 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
3272 | 5750 | 2.026822 | ACTAAGAGATTGCTGTGTGGGG | 60.027 | 50.0 | 0.0 | 0.0 | 0.0 | 4.96 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
2147 | 2520 | 2.123409 | CTGGCTCCAGGCTCTAGTC | 58.877 | 63.158 | 8.03 | 0.00 | 40.17 | 2.59 |
2148 | 2521 | 0.685785 | CTGGCTCCAGGCTCTAGTCA | 60.686 | 60.000 | 8.03 | 0.49 | 40.17 | 3.41 |
2149 | 2522 | 0.972983 | TGGCTCCAGGCTCTAGTCAC | 60.973 | 60.000 | 1.39 | 0.00 | 41.69 | 3.67 |
2150 | 2523 | 1.681486 | GGCTCCAGGCTCTAGTCACC | 61.681 | 65.000 | 0.00 | 0.00 | 41.46 | 4.02 |
2154 | 2528 | 0.820871 | CCAGGCTCTAGTCACCAGAC | 59.179 | 60.000 | 0.00 | 0.00 | 45.31 | 3.51 |
2174 | 2577 | 2.669569 | TGGCTTGCTGCTCGTTCC | 60.670 | 61.111 | 0.00 | 0.00 | 42.39 | 3.62 |
2188 | 2591 | 2.731976 | CTCGTTCCGTCAGAAAGAAAGG | 59.268 | 50.000 | 0.00 | 0.00 | 41.56 | 3.11 |
2196 | 2599 | 3.933332 | CGTCAGAAAGAAAGGATGGGTAC | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 3.34 |
2227 | 2630 | 8.455903 | TTCATTTTCAGATCAGTTCAGTTTCT | 57.544 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
2236 | 2639 | 7.980662 | CAGATCAGTTCAGTTTCTGAGTATGAT | 59.019 | 37.037 | 15.96 | 15.96 | 41.75 | 2.45 |
2238 | 2641 | 9.462174 | GATCAGTTCAGTTTCTGAGTATGATAG | 57.538 | 37.037 | 15.98 | 0.00 | 41.75 | 2.08 |
2242 | 2645 | 6.968263 | TCAGTTTCTGAGTATGATAGGAGG | 57.032 | 41.667 | 0.00 | 0.00 | 35.39 | 4.30 |
2243 | 2646 | 6.673583 | TCAGTTTCTGAGTATGATAGGAGGA | 58.326 | 40.000 | 0.00 | 0.00 | 35.39 | 3.71 |
2245 | 2648 | 7.286546 | TCAGTTTCTGAGTATGATAGGAGGAAG | 59.713 | 40.741 | 0.00 | 0.00 | 35.39 | 3.46 |
2246 | 2649 | 7.069331 | CAGTTTCTGAGTATGATAGGAGGAAGT | 59.931 | 40.741 | 0.00 | 0.00 | 32.44 | 3.01 |
2247 | 2650 | 7.286775 | AGTTTCTGAGTATGATAGGAGGAAGTC | 59.713 | 40.741 | 0.00 | 0.00 | 0.00 | 3.01 |
2261 | 2690 | 2.165845 | AGGAAGTCCGTAATTCTGTCGG | 59.834 | 50.000 | 0.00 | 0.00 | 44.76 | 4.79 |
2263 | 2692 | 0.892755 | AGTCCGTAATTCTGTCGGCA | 59.107 | 50.000 | 0.00 | 0.00 | 43.35 | 5.69 |
2286 | 2715 | 2.031157 | CCAATTGGACAGGACAACGTTC | 60.031 | 50.000 | 20.50 | 0.00 | 37.39 | 3.95 |
2296 | 2725 | 6.056428 | ACAGGACAACGTTCTTAATTTGTC | 57.944 | 37.500 | 0.00 | 0.40 | 44.69 | 3.18 |
2297 | 2726 | 5.820947 | ACAGGACAACGTTCTTAATTTGTCT | 59.179 | 36.000 | 11.32 | 0.00 | 44.76 | 3.41 |
2298 | 2727 | 6.317893 | ACAGGACAACGTTCTTAATTTGTCTT | 59.682 | 34.615 | 11.32 | 2.83 | 44.76 | 3.01 |
2304 | 2733 | 6.371809 | ACGTTCTTAATTTGTCTTCTGCAA | 57.628 | 33.333 | 0.00 | 0.00 | 0.00 | 4.08 |
2305 | 2734 | 6.970484 | ACGTTCTTAATTTGTCTTCTGCAAT | 58.030 | 32.000 | 0.00 | 0.00 | 0.00 | 3.56 |
2315 | 2744 | 7.712264 | TTTGTCTTCTGCAATTAAATTGTGG | 57.288 | 32.000 | 0.00 | 0.00 | 42.20 | 4.17 |
2316 | 2745 | 6.403866 | TGTCTTCTGCAATTAAATTGTGGT | 57.596 | 33.333 | 0.00 | 0.00 | 42.20 | 4.16 |
2317 | 2746 | 7.517614 | TGTCTTCTGCAATTAAATTGTGGTA | 57.482 | 32.000 | 0.00 | 0.00 | 42.20 | 3.25 |
2318 | 2747 | 7.946207 | TGTCTTCTGCAATTAAATTGTGGTAA | 58.054 | 30.769 | 0.00 | 0.00 | 42.20 | 2.85 |
2319 | 2748 | 8.417106 | TGTCTTCTGCAATTAAATTGTGGTAAA | 58.583 | 29.630 | 0.00 | 0.00 | 42.20 | 2.01 |
2320 | 2749 | 8.915654 | GTCTTCTGCAATTAAATTGTGGTAAAG | 58.084 | 33.333 | 0.00 | 0.00 | 42.20 | 1.85 |
2321 | 2750 | 8.637986 | TCTTCTGCAATTAAATTGTGGTAAAGT | 58.362 | 29.630 | 0.00 | 0.00 | 42.20 | 2.66 |
2322 | 2751 | 8.586570 | TTCTGCAATTAAATTGTGGTAAAGTG | 57.413 | 30.769 | 0.00 | 0.00 | 42.20 | 3.16 |
2323 | 2752 | 6.644592 | TCTGCAATTAAATTGTGGTAAAGTGC | 59.355 | 34.615 | 0.00 | 0.00 | 42.20 | 4.40 |
2324 | 2753 | 5.698545 | TGCAATTAAATTGTGGTAAAGTGCC | 59.301 | 36.000 | 3.75 | 0.00 | 42.20 | 5.01 |
2325 | 2754 | 5.698545 | GCAATTAAATTGTGGTAAAGTGCCA | 59.301 | 36.000 | 0.00 | 0.00 | 42.20 | 4.92 |
2351 | 2822 | 6.840780 | AAAAAGGGAATTTCATCGACATCT | 57.159 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2354 | 2825 | 5.614324 | AGGGAATTTCATCGACATCTGTA | 57.386 | 39.130 | 0.00 | 0.00 | 0.00 | 2.74 |
2355 | 2826 | 6.179906 | AGGGAATTTCATCGACATCTGTAT | 57.820 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
2356 | 2827 | 6.595682 | AGGGAATTTCATCGACATCTGTATT | 58.404 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2359 | 2830 | 9.653287 | GGGAATTTCATCGACATCTGTATTATA | 57.347 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
2412 | 2953 | 8.620116 | TGTCAATATCTCATTGAGTTGTCAAA | 57.380 | 30.769 | 13.23 | 0.00 | 45.88 | 2.69 |
2413 | 2954 | 8.506437 | TGTCAATATCTCATTGAGTTGTCAAAC | 58.494 | 33.333 | 13.23 | 6.03 | 45.88 | 2.93 |
2416 | 2957 | 7.856145 | ATATCTCATTGAGTTGTCAAACCTC | 57.144 | 36.000 | 13.23 | 0.00 | 45.88 | 3.85 |
2417 | 2958 | 5.034852 | TCTCATTGAGTTGTCAAACCTCA | 57.965 | 39.130 | 13.23 | 2.55 | 45.88 | 3.86 |
2420 | 2961 | 5.436175 | TCATTGAGTTGTCAAACCTCAAGA | 58.564 | 37.500 | 18.29 | 14.07 | 45.88 | 3.02 |
2444 | 2985 | 4.434713 | AAATGATTAACTTGCGACCCAC | 57.565 | 40.909 | 0.00 | 0.00 | 0.00 | 4.61 |
2445 | 2986 | 2.552599 | TGATTAACTTGCGACCCACA | 57.447 | 45.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2449 | 2990 | 5.004448 | TGATTAACTTGCGACCCACATAAA | 58.996 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
2450 | 2991 | 5.123186 | TGATTAACTTGCGACCCACATAAAG | 59.877 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2451 | 2992 | 2.851263 | ACTTGCGACCCACATAAAGA | 57.149 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2452 | 2993 | 3.350219 | ACTTGCGACCCACATAAAGAT | 57.650 | 42.857 | 0.00 | 0.00 | 0.00 | 2.40 |
2453 | 2994 | 4.481368 | ACTTGCGACCCACATAAAGATA | 57.519 | 40.909 | 0.00 | 0.00 | 0.00 | 1.98 |
2454 | 2995 | 4.839121 | ACTTGCGACCCACATAAAGATAA | 58.161 | 39.130 | 0.00 | 0.00 | 0.00 | 1.75 |
2455 | 2996 | 4.634443 | ACTTGCGACCCACATAAAGATAAC | 59.366 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
2456 | 2997 | 4.481368 | TGCGACCCACATAAAGATAACT | 57.519 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
2494 | 3035 | 6.003234 | ACAGACATAGACGCTCATACATAC | 57.997 | 41.667 | 0.00 | 0.00 | 0.00 | 2.39 |
2497 | 3038 | 4.784329 | ACATAGACGCTCATACATACACG | 58.216 | 43.478 | 0.00 | 0.00 | 0.00 | 4.49 |
2500 | 3041 | 1.517276 | GACGCTCATACATACACGCAC | 59.483 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
2501 | 3042 | 0.852777 | CGCTCATACATACACGCACC | 59.147 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2502 | 3043 | 1.536072 | CGCTCATACATACACGCACCT | 60.536 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
2503 | 3044 | 2.128035 | GCTCATACATACACGCACCTC | 58.872 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2504 | 3045 | 2.481276 | GCTCATACATACACGCACCTCA | 60.481 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2505 | 3046 | 3.116300 | CTCATACATACACGCACCTCAC | 58.884 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2507 | 3048 | 3.132111 | TCATACATACACGCACCTCACAT | 59.868 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
2508 | 3049 | 4.339814 | TCATACATACACGCACCTCACATA | 59.660 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2509 | 3050 | 3.819564 | ACATACACGCACCTCACATAT | 57.180 | 42.857 | 0.00 | 0.00 | 0.00 | 1.78 |
2510 | 3051 | 4.929819 | ACATACACGCACCTCACATATA | 57.070 | 40.909 | 0.00 | 0.00 | 0.00 | 0.86 |
2513 | 3054 | 3.438297 | ACACGCACCTCACATATACTC | 57.562 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
2514 | 3055 | 2.100916 | ACACGCACCTCACATATACTCC | 59.899 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2515 | 3056 | 1.687123 | ACGCACCTCACATATACTCCC | 59.313 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2516 | 3057 | 1.964223 | CGCACCTCACATATACTCCCT | 59.036 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
2517 | 3058 | 2.029828 | CGCACCTCACATATACTCCCTC | 60.030 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
2518 | 3059 | 2.300437 | GCACCTCACATATACTCCCTCC | 59.700 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
2519 | 3060 | 3.576861 | CACCTCACATATACTCCCTCCA | 58.423 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2521 | 3062 | 4.594920 | CACCTCACATATACTCCCTCCATT | 59.405 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
2523 | 3064 | 4.223923 | CCTCACATATACTCCCTCCATTCC | 59.776 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2524 | 3065 | 5.090139 | CTCACATATACTCCCTCCATTCCT | 58.910 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
2526 | 3067 | 6.630131 | TCACATATACTCCCTCCATTCCTAA | 58.370 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2527 | 3068 | 7.079700 | TCACATATACTCCCTCCATTCCTAAA | 58.920 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
2528 | 3069 | 7.570982 | TCACATATACTCCCTCCATTCCTAAAA | 59.429 | 37.037 | 0.00 | 0.00 | 0.00 | 1.52 |
2529 | 3070 | 8.217799 | CACATATACTCCCTCCATTCCTAAAAA | 58.782 | 37.037 | 0.00 | 0.00 | 0.00 | 1.94 |
2568 | 3109 | 9.685276 | AAGATTTCAAATGGACTATCACATACA | 57.315 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
2569 | 3110 | 9.334947 | AGATTTCAAATGGACTATCACATACAG | 57.665 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
2570 | 3111 | 9.330063 | GATTTCAAATGGACTATCACATACAGA | 57.670 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2571 | 3112 | 9.857656 | ATTTCAAATGGACTATCACATACAGAT | 57.142 | 29.630 | 0.00 | 0.00 | 0.00 | 2.90 |
2572 | 3113 | 8.667076 | TTCAAATGGACTATCACATACAGATG | 57.333 | 34.615 | 0.00 | 0.00 | 39.16 | 2.90 |
2574 | 3115 | 8.923270 | TCAAATGGACTATCACATACAGATGTA | 58.077 | 33.333 | 0.00 | 0.00 | 44.82 | 2.29 |
2575 | 3116 | 9.716531 | CAAATGGACTATCACATACAGATGTAT | 57.283 | 33.333 | 0.00 | 0.00 | 44.82 | 2.29 |
2615 | 3156 | 7.138692 | AGTGTAGATTCACTCATTTTGCTTC | 57.861 | 36.000 | 0.00 | 0.00 | 44.07 | 3.86 |
2616 | 3157 | 6.017933 | GTGTAGATTCACTCATTTTGCTTCG | 58.982 | 40.000 | 0.00 | 0.00 | 35.68 | 3.79 |
2617 | 3158 | 5.700832 | TGTAGATTCACTCATTTTGCTTCGT | 59.299 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2618 | 3159 | 6.871492 | TGTAGATTCACTCATTTTGCTTCGTA | 59.129 | 34.615 | 0.00 | 0.00 | 0.00 | 3.43 |
2619 | 3160 | 6.992063 | AGATTCACTCATTTTGCTTCGTAT | 57.008 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
2620 | 3161 | 6.779117 | AGATTCACTCATTTTGCTTCGTATG | 58.221 | 36.000 | 0.00 | 0.00 | 0.00 | 2.39 |
2621 | 3162 | 5.940192 | TTCACTCATTTTGCTTCGTATGT | 57.060 | 34.783 | 0.00 | 0.00 | 0.00 | 2.29 |
2622 | 3163 | 7.549134 | AGATTCACTCATTTTGCTTCGTATGTA | 59.451 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
2623 | 3164 | 6.647212 | TCACTCATTTTGCTTCGTATGTAG | 57.353 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
2624 | 3165 | 6.163476 | TCACTCATTTTGCTTCGTATGTAGT | 58.837 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2625 | 3166 | 6.310467 | TCACTCATTTTGCTTCGTATGTAGTC | 59.690 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
2626 | 3167 | 6.090763 | CACTCATTTTGCTTCGTATGTAGTCA | 59.909 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
2627 | 3168 | 6.090898 | ACTCATTTTGCTTCGTATGTAGTCAC | 59.909 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
2628 | 3169 | 6.163476 | TCATTTTGCTTCGTATGTAGTCACT | 58.837 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2629 | 3170 | 6.649141 | TCATTTTGCTTCGTATGTAGTCACTT | 59.351 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
2630 | 3171 | 5.839262 | TTTGCTTCGTATGTAGTCACTTG | 57.161 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2631 | 3172 | 4.514781 | TGCTTCGTATGTAGTCACTTGT | 57.485 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
2632 | 3173 | 4.878439 | TGCTTCGTATGTAGTCACTTGTT | 58.122 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
2633 | 3174 | 4.684242 | TGCTTCGTATGTAGTCACTTGTTG | 59.316 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
2634 | 3175 | 4.921515 | GCTTCGTATGTAGTCACTTGTTGA | 59.078 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
2635 | 3176 | 5.404366 | GCTTCGTATGTAGTCACTTGTTGAA | 59.596 | 40.000 | 0.00 | 0.00 | 35.39 | 2.69 |
2636 | 3177 | 6.073980 | GCTTCGTATGTAGTCACTTGTTGAAA | 60.074 | 38.462 | 0.00 | 0.00 | 35.39 | 2.69 |
2637 | 3178 | 7.360101 | GCTTCGTATGTAGTCACTTGTTGAAAT | 60.360 | 37.037 | 0.00 | 0.00 | 35.39 | 2.17 |
2638 | 3179 | 7.576750 | TCGTATGTAGTCACTTGTTGAAATC | 57.423 | 36.000 | 0.00 | 0.00 | 35.39 | 2.17 |
2639 | 3180 | 7.375834 | TCGTATGTAGTCACTTGTTGAAATCT | 58.624 | 34.615 | 0.00 | 0.00 | 35.39 | 2.40 |
2640 | 3181 | 7.541091 | TCGTATGTAGTCACTTGTTGAAATCTC | 59.459 | 37.037 | 0.00 | 0.00 | 35.39 | 2.75 |
2641 | 3182 | 7.201444 | CGTATGTAGTCACTTGTTGAAATCTCC | 60.201 | 40.741 | 0.00 | 0.00 | 35.39 | 3.71 |
2642 | 3183 | 4.988540 | TGTAGTCACTTGTTGAAATCTCCG | 59.011 | 41.667 | 0.00 | 0.00 | 35.39 | 4.63 |
2643 | 3184 | 3.403038 | AGTCACTTGTTGAAATCTCCGG | 58.597 | 45.455 | 0.00 | 0.00 | 35.39 | 5.14 |
2644 | 3185 | 3.071023 | AGTCACTTGTTGAAATCTCCGGA | 59.929 | 43.478 | 2.93 | 2.93 | 35.39 | 5.14 |
2645 | 3186 | 3.813166 | GTCACTTGTTGAAATCTCCGGAA | 59.187 | 43.478 | 5.23 | 0.00 | 35.39 | 4.30 |
2646 | 3187 | 4.274950 | GTCACTTGTTGAAATCTCCGGAAA | 59.725 | 41.667 | 5.23 | 0.00 | 35.39 | 3.13 |
2647 | 3188 | 4.515191 | TCACTTGTTGAAATCTCCGGAAAG | 59.485 | 41.667 | 5.23 | 5.35 | 0.00 | 2.62 |
2648 | 3189 | 4.515191 | CACTTGTTGAAATCTCCGGAAAGA | 59.485 | 41.667 | 5.23 | 0.00 | 0.00 | 2.52 |
2649 | 3190 | 4.515567 | ACTTGTTGAAATCTCCGGAAAGAC | 59.484 | 41.667 | 5.23 | 0.00 | 0.00 | 3.01 |
2650 | 3191 | 4.079980 | TGTTGAAATCTCCGGAAAGACA | 57.920 | 40.909 | 5.23 | 1.02 | 0.00 | 3.41 |
2651 | 3192 | 4.456535 | TGTTGAAATCTCCGGAAAGACAA | 58.543 | 39.130 | 5.23 | 6.15 | 0.00 | 3.18 |
2652 | 3193 | 4.884744 | TGTTGAAATCTCCGGAAAGACAAA | 59.115 | 37.500 | 5.23 | 0.00 | 0.00 | 2.83 |
2653 | 3194 | 5.534654 | TGTTGAAATCTCCGGAAAGACAAAT | 59.465 | 36.000 | 5.23 | 0.00 | 0.00 | 2.32 |
2654 | 3195 | 6.712998 | TGTTGAAATCTCCGGAAAGACAAATA | 59.287 | 34.615 | 5.23 | 0.00 | 0.00 | 1.40 |
2655 | 3196 | 7.393234 | TGTTGAAATCTCCGGAAAGACAAATAT | 59.607 | 33.333 | 5.23 | 0.00 | 0.00 | 1.28 |
2656 | 3197 | 7.938140 | TGAAATCTCCGGAAAGACAAATATT | 57.062 | 32.000 | 5.23 | 0.00 | 0.00 | 1.28 |
2657 | 3198 | 8.348285 | TGAAATCTCCGGAAAGACAAATATTT | 57.652 | 30.769 | 5.23 | 0.00 | 0.00 | 1.40 |
2658 | 3199 | 9.456147 | TGAAATCTCCGGAAAGACAAATATTTA | 57.544 | 29.630 | 5.23 | 0.00 | 0.00 | 1.40 |
2659 | 3200 | 9.937175 | GAAATCTCCGGAAAGACAAATATTTAG | 57.063 | 33.333 | 5.23 | 0.00 | 0.00 | 1.85 |
2660 | 3201 | 8.451908 | AATCTCCGGAAAGACAAATATTTAGG | 57.548 | 34.615 | 5.23 | 0.00 | 0.00 | 2.69 |
2661 | 3202 | 7.190335 | TCTCCGGAAAGACAAATATTTAGGA | 57.810 | 36.000 | 5.23 | 0.00 | 30.14 | 2.94 |
2662 | 3203 | 7.626390 | TCTCCGGAAAGACAAATATTTAGGAA | 58.374 | 34.615 | 5.23 | 0.00 | 30.35 | 3.36 |
2663 | 3204 | 7.551617 | TCTCCGGAAAGACAAATATTTAGGAAC | 59.448 | 37.037 | 5.23 | 0.00 | 30.35 | 3.62 |
2664 | 3205 | 6.314400 | TCCGGAAAGACAAATATTTAGGAACG | 59.686 | 38.462 | 0.00 | 1.03 | 28.69 | 3.95 |
2665 | 3206 | 6.457799 | CCGGAAAGACAAATATTTAGGAACGG | 60.458 | 42.308 | 0.00 | 6.06 | 0.00 | 4.44 |
2666 | 3207 | 6.314400 | CGGAAAGACAAATATTTAGGAACGGA | 59.686 | 38.462 | 0.00 | 0.00 | 0.00 | 4.69 |
2667 | 3208 | 7.465513 | CGGAAAGACAAATATTTAGGAACGGAG | 60.466 | 40.741 | 0.00 | 0.00 | 0.00 | 4.63 |
2668 | 3209 | 7.201705 | GGAAAGACAAATATTTAGGAACGGAGG | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
2669 | 3210 | 5.681639 | AGACAAATATTTAGGAACGGAGGG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2670 | 3211 | 5.427481 | AGACAAATATTTAGGAACGGAGGGA | 59.573 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2671 | 3212 | 5.681639 | ACAAATATTTAGGAACGGAGGGAG | 58.318 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2672 | 3213 | 5.191124 | ACAAATATTTAGGAACGGAGGGAGT | 59.809 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2673 | 3214 | 6.384886 | ACAAATATTTAGGAACGGAGGGAGTA | 59.615 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
2674 | 3215 | 7.072076 | ACAAATATTTAGGAACGGAGGGAGTAT | 59.928 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
2675 | 3216 | 4.957684 | ATTTAGGAACGGAGGGAGTATG | 57.042 | 45.455 | 0.00 | 0.00 | 0.00 | 2.39 |
2676 | 3217 | 3.675348 | TTAGGAACGGAGGGAGTATGA | 57.325 | 47.619 | 0.00 | 0.00 | 0.00 | 2.15 |
2677 | 3218 | 1.777941 | AGGAACGGAGGGAGTATGAC | 58.222 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2678 | 3219 | 1.006758 | AGGAACGGAGGGAGTATGACA | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
2679 | 3220 | 2.040178 | GGAACGGAGGGAGTATGACAT | 58.960 | 52.381 | 0.00 | 0.00 | 0.00 | 3.06 |
2680 | 3221 | 2.036089 | GGAACGGAGGGAGTATGACATC | 59.964 | 54.545 | 0.00 | 0.00 | 0.00 | 3.06 |
2681 | 3222 | 1.705873 | ACGGAGGGAGTATGACATCC | 58.294 | 55.000 | 0.00 | 0.00 | 34.64 | 3.51 |
2682 | 3223 | 1.218196 | ACGGAGGGAGTATGACATCCT | 59.782 | 52.381 | 0.00 | 0.00 | 35.80 | 3.24 |
2683 | 3224 | 2.445905 | ACGGAGGGAGTATGACATCCTA | 59.554 | 50.000 | 0.00 | 0.00 | 35.80 | 2.94 |
2684 | 3225 | 3.085533 | CGGAGGGAGTATGACATCCTAG | 58.914 | 54.545 | 0.00 | 0.00 | 35.80 | 3.02 |
2685 | 3226 | 2.829120 | GGAGGGAGTATGACATCCTAGC | 59.171 | 54.545 | 0.00 | 0.00 | 35.80 | 3.42 |
2686 | 3227 | 2.829120 | GAGGGAGTATGACATCCTAGCC | 59.171 | 54.545 | 0.00 | 0.00 | 35.80 | 3.93 |
2687 | 3228 | 1.903183 | GGGAGTATGACATCCTAGCCC | 59.097 | 57.143 | 0.00 | 0.00 | 35.80 | 5.19 |
2688 | 3229 | 2.493687 | GGGAGTATGACATCCTAGCCCT | 60.494 | 54.545 | 0.00 | 0.00 | 35.80 | 5.19 |
2689 | 3230 | 3.245658 | GGGAGTATGACATCCTAGCCCTA | 60.246 | 52.174 | 0.00 | 0.00 | 35.80 | 3.53 |
2690 | 3231 | 4.573087 | GGGAGTATGACATCCTAGCCCTAT | 60.573 | 50.000 | 0.00 | 0.00 | 35.80 | 2.57 |
2691 | 3232 | 4.404073 | GGAGTATGACATCCTAGCCCTATG | 59.596 | 50.000 | 0.00 | 0.00 | 32.51 | 2.23 |
2692 | 3233 | 5.265191 | GAGTATGACATCCTAGCCCTATGA | 58.735 | 45.833 | 0.00 | 0.00 | 0.00 | 2.15 |
2693 | 3234 | 5.268387 | AGTATGACATCCTAGCCCTATGAG | 58.732 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
2694 | 3235 | 3.619900 | TGACATCCTAGCCCTATGAGT | 57.380 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
2695 | 3236 | 4.741928 | TGACATCCTAGCCCTATGAGTA | 57.258 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
2696 | 3237 | 4.408276 | TGACATCCTAGCCCTATGAGTAC | 58.592 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
2697 | 3238 | 4.106502 | TGACATCCTAGCCCTATGAGTACT | 59.893 | 45.833 | 0.00 | 0.00 | 0.00 | 2.73 |
2698 | 3239 | 5.081032 | GACATCCTAGCCCTATGAGTACTT | 58.919 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
2699 | 3240 | 5.468658 | ACATCCTAGCCCTATGAGTACTTT | 58.531 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
2700 | 3241 | 5.540719 | ACATCCTAGCCCTATGAGTACTTTC | 59.459 | 44.000 | 0.00 | 0.00 | 0.00 | 2.62 |
2701 | 3242 | 5.405063 | TCCTAGCCCTATGAGTACTTTCT | 57.595 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
2702 | 3243 | 5.778542 | TCCTAGCCCTATGAGTACTTTCTT | 58.221 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
2703 | 3244 | 5.834204 | TCCTAGCCCTATGAGTACTTTCTTC | 59.166 | 44.000 | 0.00 | 0.00 | 0.00 | 2.87 |
2704 | 3245 | 5.598830 | CCTAGCCCTATGAGTACTTTCTTCA | 59.401 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2705 | 3246 | 5.606348 | AGCCCTATGAGTACTTTCTTCAG | 57.394 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
2706 | 3247 | 5.273208 | AGCCCTATGAGTACTTTCTTCAGA | 58.727 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
2707 | 3248 | 5.128008 | AGCCCTATGAGTACTTTCTTCAGAC | 59.872 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2708 | 3249 | 5.682730 | GCCCTATGAGTACTTTCTTCAGACC | 60.683 | 48.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2709 | 3250 | 5.422331 | CCCTATGAGTACTTTCTTCAGACCA | 59.578 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2710 | 3251 | 6.070767 | CCCTATGAGTACTTTCTTCAGACCAA | 60.071 | 42.308 | 0.00 | 0.00 | 0.00 | 3.67 |
2711 | 3252 | 7.386851 | CCTATGAGTACTTTCTTCAGACCAAA | 58.613 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
2712 | 3253 | 7.332182 | CCTATGAGTACTTTCTTCAGACCAAAC | 59.668 | 40.741 | 0.00 | 0.00 | 0.00 | 2.93 |
2713 | 3254 | 6.235231 | TGAGTACTTTCTTCAGACCAAACT | 57.765 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
2714 | 3255 | 6.049149 | TGAGTACTTTCTTCAGACCAAACTG | 58.951 | 40.000 | 0.00 | 0.00 | 39.02 | 3.16 |
2715 | 3256 | 6.127168 | TGAGTACTTTCTTCAGACCAAACTGA | 60.127 | 38.462 | 0.00 | 0.00 | 43.83 | 3.41 |
2718 | 3259 | 4.878397 | ACTTTCTTCAGACCAAACTGACAG | 59.122 | 41.667 | 0.00 | 0.00 | 44.94 | 3.51 |
2721 | 3262 | 4.887748 | TCTTCAGACCAAACTGACAGATC | 58.112 | 43.478 | 10.08 | 0.00 | 44.94 | 2.75 |
2724 | 3265 | 4.825422 | TCAGACCAAACTGACAGATCATC | 58.175 | 43.478 | 10.08 | 0.29 | 41.21 | 2.92 |
2733 | 3274 | 7.414208 | CCAAACTGACAGATCATCTTGAGATTG | 60.414 | 40.741 | 10.08 | 0.00 | 33.22 | 2.67 |
2769 | 3310 | 5.049336 | ACAGATGTATTATCAGTCGACGGAG | 60.049 | 44.000 | 22.45 | 11.36 | 0.00 | 4.63 |
2791 | 3332 | 3.464907 | ACATCTCCTCTCATTGAATGCG | 58.535 | 45.455 | 0.00 | 0.00 | 0.00 | 4.73 |
2808 | 3349 | 0.876342 | GCGCGTAAAGATAGCTGGCT | 60.876 | 55.000 | 8.43 | 0.00 | 0.00 | 4.75 |
2814 | 3355 | 5.471257 | GCGTAAAGATAGCTGGCTAGTAAT | 58.529 | 41.667 | 8.31 | 0.00 | 31.45 | 1.89 |
2815 | 3356 | 5.346281 | GCGTAAAGATAGCTGGCTAGTAATG | 59.654 | 44.000 | 8.31 | 0.21 | 31.45 | 1.90 |
2825 | 3366 | 4.001652 | CTGGCTAGTAATGCATCCATCTG | 58.998 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
2834 | 4703 | 7.609960 | AGTAATGCATCCATCTGATACTAGTG | 58.390 | 38.462 | 5.39 | 0.00 | 30.56 | 2.74 |
2842 | 4711 | 4.498177 | CCATCTGATACTAGTGTCACCACG | 60.498 | 50.000 | 17.43 | 8.87 | 46.56 | 4.94 |
2884 | 4753 | 3.370103 | CCCACCCACGTTAGAACATGTAT | 60.370 | 47.826 | 0.00 | 0.00 | 0.00 | 2.29 |
2887 | 4756 | 5.116180 | CACCCACGTTAGAACATGTATCAT | 58.884 | 41.667 | 0.00 | 0.00 | 0.00 | 2.45 |
2894 | 4763 | 6.593770 | ACGTTAGAACATGTATCATTGCAAGA | 59.406 | 34.615 | 4.94 | 3.10 | 0.00 | 3.02 |
2952 | 5192 | 5.239306 | CCGCACATATGGTCATGAAAACTAT | 59.761 | 40.000 | 7.80 | 0.00 | 0.00 | 2.12 |
2954 | 5431 | 6.634035 | CGCACATATGGTCATGAAAACTATTG | 59.366 | 38.462 | 7.80 | 0.00 | 0.00 | 1.90 |
2956 | 5433 | 7.433131 | GCACATATGGTCATGAAAACTATTGTG | 59.567 | 37.037 | 7.80 | 7.43 | 34.19 | 3.33 |
2963 | 5440 | 7.176515 | TGGTCATGAAAACTATTGTGCACTAAT | 59.823 | 33.333 | 19.41 | 17.05 | 0.00 | 1.73 |
2967 | 5444 | 9.838975 | CATGAAAACTATTGTGCACTAATTACA | 57.161 | 29.630 | 19.41 | 10.57 | 0.00 | 2.41 |
2974 | 5451 | 9.712305 | ACTATTGTGCACTAATTACAGGATATC | 57.288 | 33.333 | 19.41 | 0.00 | 0.00 | 1.63 |
2992 | 5470 | 7.225538 | CAGGATATCTTGTGTTAAGGCTAGTTG | 59.774 | 40.741 | 6.67 | 0.00 | 0.00 | 3.16 |
2993 | 5471 | 7.125811 | AGGATATCTTGTGTTAAGGCTAGTTGA | 59.874 | 37.037 | 2.05 | 0.00 | 0.00 | 3.18 |
2994 | 5472 | 7.934120 | GGATATCTTGTGTTAAGGCTAGTTGAT | 59.066 | 37.037 | 2.05 | 0.00 | 0.00 | 2.57 |
2995 | 5473 | 9.331282 | GATATCTTGTGTTAAGGCTAGTTGATT | 57.669 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2996 | 5474 | 6.801539 | TCTTGTGTTAAGGCTAGTTGATTG | 57.198 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
2997 | 5475 | 6.296026 | TCTTGTGTTAAGGCTAGTTGATTGT | 58.704 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2998 | 5476 | 5.940192 | TGTGTTAAGGCTAGTTGATTGTG | 57.060 | 39.130 | 0.00 | 0.00 | 0.00 | 3.33 |
2999 | 5477 | 4.759693 | TGTGTTAAGGCTAGTTGATTGTGG | 59.240 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
3000 | 5478 | 5.001232 | GTGTTAAGGCTAGTTGATTGTGGA | 58.999 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
3001 | 5479 | 5.472137 | GTGTTAAGGCTAGTTGATTGTGGAA | 59.528 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3002 | 5480 | 6.151144 | GTGTTAAGGCTAGTTGATTGTGGAAT | 59.849 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
3003 | 5481 | 7.335924 | GTGTTAAGGCTAGTTGATTGTGGAATA | 59.664 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
3004 | 5482 | 7.335924 | TGTTAAGGCTAGTTGATTGTGGAATAC | 59.664 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
3005 | 5483 | 5.435686 | AGGCTAGTTGATTGTGGAATACA | 57.564 | 39.130 | 0.00 | 0.00 | 37.56 | 2.29 |
3017 | 5495 | 6.817765 | TTGTGGAATACAAAGAAGGATGAC | 57.182 | 37.500 | 0.00 | 0.00 | 45.86 | 3.06 |
3018 | 5496 | 6.126863 | TGTGGAATACAAAGAAGGATGACT | 57.873 | 37.500 | 0.00 | 0.00 | 36.06 | 3.41 |
3019 | 5497 | 5.939883 | TGTGGAATACAAAGAAGGATGACTG | 59.060 | 40.000 | 0.00 | 0.00 | 36.06 | 3.51 |
3021 | 5499 | 6.431234 | GTGGAATACAAAGAAGGATGACTGTT | 59.569 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
3024 | 5502 | 3.554934 | ACAAAGAAGGATGACTGTTGCA | 58.445 | 40.909 | 0.00 | 0.00 | 0.00 | 4.08 |
3044 | 5522 | 3.243401 | GCAATATTGCGGTTTTAGGAGGG | 60.243 | 47.826 | 23.77 | 0.00 | 45.11 | 4.30 |
3045 | 5523 | 4.204012 | CAATATTGCGGTTTTAGGAGGGA | 58.796 | 43.478 | 1.74 | 0.00 | 0.00 | 4.20 |
3047 | 5525 | 0.326927 | TTGCGGTTTTAGGAGGGAGG | 59.673 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3050 | 5528 | 1.271762 | GCGGTTTTAGGAGGGAGGTTT | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
3052 | 5530 | 2.039348 | CGGTTTTAGGAGGGAGGTTTGA | 59.961 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3053 | 5531 | 3.308188 | CGGTTTTAGGAGGGAGGTTTGAT | 60.308 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
3063 | 5541 | 5.396324 | GGAGGGAGGTTTGATTTTGTTTGTT | 60.396 | 40.000 | 0.00 | 0.00 | 0.00 | 2.83 |
3092 | 5570 | 5.788450 | TGTTTAAGTGTTTGGCCATATTGG | 58.212 | 37.500 | 6.09 | 0.00 | 41.55 | 3.16 |
3117 | 5595 | 6.688073 | TTCTTCCAATTCAGTCCTCTACTT | 57.312 | 37.500 | 0.00 | 0.00 | 35.76 | 2.24 |
3146 | 5624 | 7.974243 | ATTACGGTAGTTTCAAACAAAACAC | 57.026 | 32.000 | 2.41 | 0.00 | 40.77 | 3.32 |
3149 | 5627 | 6.391537 | ACGGTAGTTTCAAACAAAACACAAT | 58.608 | 32.000 | 2.41 | 0.00 | 40.77 | 2.71 |
3179 | 5657 | 2.472695 | AAGCCGTAGATCACAAAGCA | 57.527 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3211 | 5689 | 5.614324 | AATCACCCGACTCTTAATGATCA | 57.386 | 39.130 | 0.00 | 0.00 | 0.00 | 2.92 |
3251 | 5729 | 7.248976 | ACCATATATCTGGTCTCTATCCAACA | 58.751 | 38.462 | 6.95 | 0.00 | 46.79 | 3.33 |
3252 | 5730 | 7.734865 | ACCATATATCTGGTCTCTATCCAACAA | 59.265 | 37.037 | 6.95 | 0.00 | 46.79 | 2.83 |
3254 | 5732 | 9.597170 | CATATATCTGGTCTCTATCCAACAATG | 57.403 | 37.037 | 0.00 | 0.00 | 34.35 | 2.82 |
3256 | 5734 | 5.344743 | TCTGGTCTCTATCCAACAATGTC | 57.655 | 43.478 | 0.00 | 0.00 | 34.35 | 3.06 |
3258 | 5736 | 5.089970 | TGGTCTCTATCCAACAATGTCTG | 57.910 | 43.478 | 0.00 | 0.00 | 31.50 | 3.51 |
3262 | 5740 | 6.344500 | GTCTCTATCCAACAATGTCTGACAT | 58.656 | 40.000 | 17.24 | 17.24 | 41.31 | 3.06 |
3281 | 5759 | 7.773224 | TCTGACATAAATATTTACCCCACACAG | 59.227 | 37.037 | 10.07 | 11.76 | 0.00 | 3.66 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
2150 | 2523 | 3.576004 | GCAGCAAGCCAGAGTCTG | 58.424 | 61.111 | 13.56 | 13.56 | 37.23 | 3.51 |
2174 | 2577 | 3.059352 | ACCCATCCTTTCTTTCTGACG | 57.941 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
2196 | 2599 | 6.881065 | TGAACTGATCTGAAAATGAAGTAGGG | 59.119 | 38.462 | 6.60 | 0.00 | 0.00 | 3.53 |
2200 | 2603 | 7.814264 | AACTGAACTGATCTGAAAATGAAGT | 57.186 | 32.000 | 6.60 | 0.00 | 0.00 | 3.01 |
2213 | 2616 | 8.420222 | CCTATCATACTCAGAAACTGAACTGAT | 58.580 | 37.037 | 16.62 | 16.62 | 40.18 | 2.90 |
2227 | 2630 | 4.141228 | ACGGACTTCCTCCTATCATACTCA | 60.141 | 45.833 | 0.00 | 0.00 | 36.80 | 3.41 |
2236 | 2639 | 4.607239 | ACAGAATTACGGACTTCCTCCTA | 58.393 | 43.478 | 0.00 | 0.00 | 36.80 | 2.94 |
2238 | 2641 | 3.734293 | CGACAGAATTACGGACTTCCTCC | 60.734 | 52.174 | 0.00 | 0.00 | 35.33 | 4.30 |
2248 | 2651 | 1.934589 | TGGATGCCGACAGAATTACG | 58.065 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2249 | 2652 | 4.498009 | CCAATTGGATGCCGACAGAATTAC | 60.498 | 45.833 | 20.50 | 0.00 | 37.39 | 1.89 |
2251 | 2654 | 2.428171 | CCAATTGGATGCCGACAGAATT | 59.572 | 45.455 | 20.50 | 0.00 | 37.39 | 2.17 |
2252 | 2655 | 2.026641 | CCAATTGGATGCCGACAGAAT | 58.973 | 47.619 | 20.50 | 0.00 | 37.39 | 2.40 |
2253 | 2656 | 1.004161 | TCCAATTGGATGCCGACAGAA | 59.996 | 47.619 | 23.63 | 0.00 | 39.78 | 3.02 |
2255 | 2658 | 3.173540 | TCCAATTGGATGCCGACAG | 57.826 | 52.632 | 23.63 | 0.00 | 39.78 | 3.51 |
2280 | 2709 | 6.371809 | TGCAGAAGACAAATTAAGAACGTT | 57.628 | 33.333 | 0.00 | 0.00 | 0.00 | 3.99 |
2296 | 2725 | 8.702438 | CACTTTACCACAATTTAATTGCAGAAG | 58.298 | 33.333 | 16.57 | 14.50 | 43.98 | 2.85 |
2297 | 2726 | 7.170658 | GCACTTTACCACAATTTAATTGCAGAA | 59.829 | 33.333 | 16.57 | 4.63 | 43.98 | 3.02 |
2298 | 2727 | 6.644592 | GCACTTTACCACAATTTAATTGCAGA | 59.355 | 34.615 | 16.57 | 0.00 | 43.98 | 4.26 |
2328 | 2757 | 6.209391 | ACAGATGTCGATGAAATTCCCTTTTT | 59.791 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
2329 | 2758 | 5.711976 | ACAGATGTCGATGAAATTCCCTTTT | 59.288 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
2330 | 2759 | 5.256474 | ACAGATGTCGATGAAATTCCCTTT | 58.744 | 37.500 | 0.00 | 0.00 | 0.00 | 3.11 |
2331 | 2760 | 4.848357 | ACAGATGTCGATGAAATTCCCTT | 58.152 | 39.130 | 0.00 | 0.00 | 0.00 | 3.95 |
2332 | 2761 | 4.494091 | ACAGATGTCGATGAAATTCCCT | 57.506 | 40.909 | 0.00 | 0.00 | 0.00 | 4.20 |
2333 | 2762 | 6.867662 | AATACAGATGTCGATGAAATTCCC | 57.132 | 37.500 | 0.00 | 0.00 | 0.00 | 3.97 |
2385 | 2856 | 9.889128 | TTGACAACTCAATGAGATATTGACATA | 57.111 | 29.630 | 18.20 | 6.38 | 34.66 | 2.29 |
2433 | 2974 | 4.876107 | AGTTATCTTTATGTGGGTCGCAAG | 59.124 | 41.667 | 0.00 | 0.00 | 0.00 | 4.01 |
2434 | 2975 | 4.839121 | AGTTATCTTTATGTGGGTCGCAA | 58.161 | 39.130 | 0.00 | 0.00 | 0.00 | 4.85 |
2470 | 3011 | 4.553756 | TGTATGAGCGTCTATGTCTGTC | 57.446 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
2476 | 3017 | 3.604198 | GCGTGTATGTATGAGCGTCTATG | 59.396 | 47.826 | 0.00 | 0.00 | 0.00 | 2.23 |
2477 | 3018 | 3.252458 | TGCGTGTATGTATGAGCGTCTAT | 59.748 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
2494 | 3035 | 2.545952 | GGGAGTATATGTGAGGTGCGTG | 60.546 | 54.545 | 0.00 | 0.00 | 0.00 | 5.34 |
2497 | 3038 | 2.300437 | GGAGGGAGTATATGTGAGGTGC | 59.700 | 54.545 | 0.00 | 0.00 | 0.00 | 5.01 |
2500 | 3041 | 4.223923 | GGAATGGAGGGAGTATATGTGAGG | 59.776 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2501 | 3042 | 5.090139 | AGGAATGGAGGGAGTATATGTGAG | 58.910 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
2502 | 3043 | 5.093236 | AGGAATGGAGGGAGTATATGTGA | 57.907 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
2503 | 3044 | 6.935240 | TTAGGAATGGAGGGAGTATATGTG | 57.065 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
2504 | 3045 | 7.947782 | TTTTAGGAATGGAGGGAGTATATGT | 57.052 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2542 | 3083 | 9.685276 | TGTATGTGATAGTCCATTTGAAATCTT | 57.315 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
2543 | 3084 | 9.334947 | CTGTATGTGATAGTCCATTTGAAATCT | 57.665 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
2544 | 3085 | 9.330063 | TCTGTATGTGATAGTCCATTTGAAATC | 57.670 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2545 | 3086 | 9.857656 | ATCTGTATGTGATAGTCCATTTGAAAT | 57.142 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
2546 | 3087 | 9.112725 | CATCTGTATGTGATAGTCCATTTGAAA | 57.887 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2547 | 3088 | 8.267183 | ACATCTGTATGTGATAGTCCATTTGAA | 58.733 | 33.333 | 0.00 | 0.00 | 44.79 | 2.69 |
2548 | 3089 | 7.795047 | ACATCTGTATGTGATAGTCCATTTGA | 58.205 | 34.615 | 0.00 | 0.00 | 44.79 | 2.69 |
2549 | 3090 | 9.716531 | ATACATCTGTATGTGATAGTCCATTTG | 57.283 | 33.333 | 2.10 | 0.00 | 45.99 | 2.32 |
2592 | 3133 | 6.017933 | CGAAGCAAAATGAGTGAATCTACAC | 58.982 | 40.000 | 0.00 | 0.00 | 40.60 | 2.90 |
2593 | 3134 | 5.700832 | ACGAAGCAAAATGAGTGAATCTACA | 59.299 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2594 | 3135 | 6.170675 | ACGAAGCAAAATGAGTGAATCTAC | 57.829 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
2595 | 3136 | 7.549134 | ACATACGAAGCAAAATGAGTGAATCTA | 59.451 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
2596 | 3137 | 6.372659 | ACATACGAAGCAAAATGAGTGAATCT | 59.627 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
2597 | 3138 | 6.546395 | ACATACGAAGCAAAATGAGTGAATC | 58.454 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2598 | 3139 | 6.500684 | ACATACGAAGCAAAATGAGTGAAT | 57.499 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2599 | 3140 | 5.940192 | ACATACGAAGCAAAATGAGTGAA | 57.060 | 34.783 | 0.00 | 0.00 | 0.00 | 3.18 |
2600 | 3141 | 6.163476 | ACTACATACGAAGCAAAATGAGTGA | 58.837 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2601 | 3142 | 6.090763 | TGACTACATACGAAGCAAAATGAGTG | 59.909 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
2602 | 3143 | 6.090898 | GTGACTACATACGAAGCAAAATGAGT | 59.909 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
2603 | 3144 | 6.311445 | AGTGACTACATACGAAGCAAAATGAG | 59.689 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
2604 | 3145 | 6.163476 | AGTGACTACATACGAAGCAAAATGA | 58.837 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2605 | 3146 | 6.408858 | AGTGACTACATACGAAGCAAAATG | 57.591 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
2606 | 3147 | 6.426937 | ACAAGTGACTACATACGAAGCAAAAT | 59.573 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
2607 | 3148 | 5.756347 | ACAAGTGACTACATACGAAGCAAAA | 59.244 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2608 | 3149 | 5.294356 | ACAAGTGACTACATACGAAGCAAA | 58.706 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
2609 | 3150 | 4.878439 | ACAAGTGACTACATACGAAGCAA | 58.122 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
2610 | 3151 | 4.514781 | ACAAGTGACTACATACGAAGCA | 57.485 | 40.909 | 0.00 | 0.00 | 0.00 | 3.91 |
2611 | 3152 | 4.921515 | TCAACAAGTGACTACATACGAAGC | 59.078 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
2612 | 3153 | 7.402811 | TTTCAACAAGTGACTACATACGAAG | 57.597 | 36.000 | 0.00 | 0.00 | 35.39 | 3.79 |
2613 | 3154 | 7.870954 | AGATTTCAACAAGTGACTACATACGAA | 59.129 | 33.333 | 0.00 | 0.00 | 35.39 | 3.85 |
2614 | 3155 | 7.375834 | AGATTTCAACAAGTGACTACATACGA | 58.624 | 34.615 | 0.00 | 0.00 | 35.39 | 3.43 |
2615 | 3156 | 7.201444 | GGAGATTTCAACAAGTGACTACATACG | 60.201 | 40.741 | 0.00 | 0.00 | 35.39 | 3.06 |
2616 | 3157 | 7.201444 | CGGAGATTTCAACAAGTGACTACATAC | 60.201 | 40.741 | 0.00 | 0.00 | 35.39 | 2.39 |
2617 | 3158 | 6.811665 | CGGAGATTTCAACAAGTGACTACATA | 59.188 | 38.462 | 0.00 | 0.00 | 35.39 | 2.29 |
2618 | 3159 | 5.639506 | CGGAGATTTCAACAAGTGACTACAT | 59.360 | 40.000 | 0.00 | 0.00 | 35.39 | 2.29 |
2619 | 3160 | 4.988540 | CGGAGATTTCAACAAGTGACTACA | 59.011 | 41.667 | 0.00 | 0.00 | 35.39 | 2.74 |
2620 | 3161 | 4.389077 | CCGGAGATTTCAACAAGTGACTAC | 59.611 | 45.833 | 0.00 | 0.00 | 35.39 | 2.73 |
2621 | 3162 | 4.282449 | TCCGGAGATTTCAACAAGTGACTA | 59.718 | 41.667 | 0.00 | 0.00 | 35.39 | 2.59 |
2622 | 3163 | 3.071023 | TCCGGAGATTTCAACAAGTGACT | 59.929 | 43.478 | 0.00 | 0.00 | 35.39 | 3.41 |
2623 | 3164 | 3.399330 | TCCGGAGATTTCAACAAGTGAC | 58.601 | 45.455 | 0.00 | 0.00 | 35.39 | 3.67 |
2624 | 3165 | 3.762407 | TCCGGAGATTTCAACAAGTGA | 57.238 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
2625 | 3166 | 4.515191 | TCTTTCCGGAGATTTCAACAAGTG | 59.485 | 41.667 | 3.34 | 0.00 | 0.00 | 3.16 |
2626 | 3167 | 4.515567 | GTCTTTCCGGAGATTTCAACAAGT | 59.484 | 41.667 | 3.34 | 0.00 | 0.00 | 3.16 |
2627 | 3168 | 4.515191 | TGTCTTTCCGGAGATTTCAACAAG | 59.485 | 41.667 | 3.34 | 1.99 | 0.00 | 3.16 |
2628 | 3169 | 4.456535 | TGTCTTTCCGGAGATTTCAACAA | 58.543 | 39.130 | 3.34 | 0.00 | 0.00 | 2.83 |
2629 | 3170 | 4.079980 | TGTCTTTCCGGAGATTTCAACA | 57.920 | 40.909 | 3.34 | 1.08 | 0.00 | 3.33 |
2630 | 3171 | 5.432885 | TTTGTCTTTCCGGAGATTTCAAC | 57.567 | 39.130 | 3.34 | 0.00 | 0.00 | 3.18 |
2631 | 3172 | 7.938140 | ATATTTGTCTTTCCGGAGATTTCAA | 57.062 | 32.000 | 3.34 | 5.71 | 0.00 | 2.69 |
2632 | 3173 | 7.938140 | AATATTTGTCTTTCCGGAGATTTCA | 57.062 | 32.000 | 3.34 | 0.00 | 0.00 | 2.69 |
2633 | 3174 | 9.937175 | CTAAATATTTGTCTTTCCGGAGATTTC | 57.063 | 33.333 | 11.05 | 0.00 | 0.00 | 2.17 |
2634 | 3175 | 8.903820 | CCTAAATATTTGTCTTTCCGGAGATTT | 58.096 | 33.333 | 11.05 | 0.00 | 0.00 | 2.17 |
2635 | 3176 | 8.272173 | TCCTAAATATTTGTCTTTCCGGAGATT | 58.728 | 33.333 | 11.05 | 0.00 | 0.00 | 2.40 |
2636 | 3177 | 7.802117 | TCCTAAATATTTGTCTTTCCGGAGAT | 58.198 | 34.615 | 11.05 | 0.00 | 0.00 | 2.75 |
2637 | 3178 | 7.190335 | TCCTAAATATTTGTCTTTCCGGAGA | 57.810 | 36.000 | 11.05 | 0.00 | 0.00 | 3.71 |
2638 | 3179 | 7.465513 | CGTTCCTAAATATTTGTCTTTCCGGAG | 60.466 | 40.741 | 11.05 | 0.00 | 0.00 | 4.63 |
2639 | 3180 | 6.314400 | CGTTCCTAAATATTTGTCTTTCCGGA | 59.686 | 38.462 | 11.05 | 0.00 | 0.00 | 5.14 |
2640 | 3181 | 6.457799 | CCGTTCCTAAATATTTGTCTTTCCGG | 60.458 | 42.308 | 11.05 | 0.00 | 0.00 | 5.14 |
2641 | 3182 | 6.314400 | TCCGTTCCTAAATATTTGTCTTTCCG | 59.686 | 38.462 | 11.05 | 4.70 | 0.00 | 4.30 |
2642 | 3183 | 7.201705 | CCTCCGTTCCTAAATATTTGTCTTTCC | 60.202 | 40.741 | 11.05 | 0.00 | 0.00 | 3.13 |
2643 | 3184 | 7.201705 | CCCTCCGTTCCTAAATATTTGTCTTTC | 60.202 | 40.741 | 11.05 | 0.00 | 0.00 | 2.62 |
2644 | 3185 | 6.602009 | CCCTCCGTTCCTAAATATTTGTCTTT | 59.398 | 38.462 | 11.05 | 0.00 | 0.00 | 2.52 |
2645 | 3186 | 6.069847 | TCCCTCCGTTCCTAAATATTTGTCTT | 60.070 | 38.462 | 11.05 | 0.00 | 0.00 | 3.01 |
2646 | 3187 | 5.427481 | TCCCTCCGTTCCTAAATATTTGTCT | 59.573 | 40.000 | 11.05 | 0.00 | 0.00 | 3.41 |
2647 | 3188 | 5.677567 | TCCCTCCGTTCCTAAATATTTGTC | 58.322 | 41.667 | 11.05 | 0.00 | 0.00 | 3.18 |
2648 | 3189 | 5.191124 | ACTCCCTCCGTTCCTAAATATTTGT | 59.809 | 40.000 | 11.05 | 0.00 | 0.00 | 2.83 |
2649 | 3190 | 5.681639 | ACTCCCTCCGTTCCTAAATATTTG | 58.318 | 41.667 | 11.05 | 1.40 | 0.00 | 2.32 |
2650 | 3191 | 5.970501 | ACTCCCTCCGTTCCTAAATATTT | 57.029 | 39.130 | 5.89 | 5.89 | 0.00 | 1.40 |
2651 | 3192 | 6.785963 | TCATACTCCCTCCGTTCCTAAATATT | 59.214 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
2652 | 3193 | 6.210984 | GTCATACTCCCTCCGTTCCTAAATAT | 59.789 | 42.308 | 0.00 | 0.00 | 0.00 | 1.28 |
2653 | 3194 | 5.537674 | GTCATACTCCCTCCGTTCCTAAATA | 59.462 | 44.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2654 | 3195 | 4.344390 | GTCATACTCCCTCCGTTCCTAAAT | 59.656 | 45.833 | 0.00 | 0.00 | 0.00 | 1.40 |
2655 | 3196 | 3.703052 | GTCATACTCCCTCCGTTCCTAAA | 59.297 | 47.826 | 0.00 | 0.00 | 0.00 | 1.85 |
2656 | 3197 | 3.294214 | GTCATACTCCCTCCGTTCCTAA | 58.706 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2657 | 3198 | 2.242965 | TGTCATACTCCCTCCGTTCCTA | 59.757 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
2658 | 3199 | 1.006758 | TGTCATACTCCCTCCGTTCCT | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
2659 | 3200 | 1.481871 | TGTCATACTCCCTCCGTTCC | 58.518 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2660 | 3201 | 2.036089 | GGATGTCATACTCCCTCCGTTC | 59.964 | 54.545 | 0.00 | 0.00 | 0.00 | 3.95 |
2661 | 3202 | 2.040178 | GGATGTCATACTCCCTCCGTT | 58.960 | 52.381 | 0.00 | 0.00 | 0.00 | 4.44 |
2662 | 3203 | 1.218196 | AGGATGTCATACTCCCTCCGT | 59.782 | 52.381 | 0.00 | 0.00 | 31.49 | 4.69 |
2663 | 3204 | 2.002505 | AGGATGTCATACTCCCTCCG | 57.997 | 55.000 | 0.00 | 0.00 | 31.49 | 4.63 |
2664 | 3205 | 2.829120 | GCTAGGATGTCATACTCCCTCC | 59.171 | 54.545 | 0.00 | 0.00 | 31.49 | 4.30 |
2665 | 3206 | 2.829120 | GGCTAGGATGTCATACTCCCTC | 59.171 | 54.545 | 0.00 | 0.00 | 31.49 | 4.30 |
2666 | 3207 | 2.493687 | GGGCTAGGATGTCATACTCCCT | 60.494 | 54.545 | 12.80 | 5.53 | 31.49 | 4.20 |
2667 | 3208 | 1.903183 | GGGCTAGGATGTCATACTCCC | 59.097 | 57.143 | 0.00 | 3.33 | 31.49 | 4.30 |
2668 | 3209 | 2.896039 | AGGGCTAGGATGTCATACTCC | 58.104 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2669 | 3210 | 5.265191 | TCATAGGGCTAGGATGTCATACTC | 58.735 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
2670 | 3211 | 5.222442 | ACTCATAGGGCTAGGATGTCATACT | 60.222 | 44.000 | 2.35 | 2.35 | 0.00 | 2.12 |
2671 | 3212 | 5.020132 | ACTCATAGGGCTAGGATGTCATAC | 58.980 | 45.833 | 0.00 | 0.00 | 0.00 | 2.39 |
2672 | 3213 | 5.276694 | ACTCATAGGGCTAGGATGTCATA | 57.723 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
2673 | 3214 | 4.139162 | ACTCATAGGGCTAGGATGTCAT | 57.861 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
2674 | 3215 | 3.619900 | ACTCATAGGGCTAGGATGTCA | 57.380 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
2675 | 3216 | 4.668636 | AGTACTCATAGGGCTAGGATGTC | 58.331 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
2676 | 3217 | 4.750833 | AGTACTCATAGGGCTAGGATGT | 57.249 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
2677 | 3218 | 5.777732 | AGAAAGTACTCATAGGGCTAGGATG | 59.222 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2678 | 3219 | 5.971493 | AGAAAGTACTCATAGGGCTAGGAT | 58.029 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
2679 | 3220 | 5.405063 | AGAAAGTACTCATAGGGCTAGGA | 57.595 | 43.478 | 0.00 | 0.00 | 0.00 | 2.94 |
2680 | 3221 | 5.598830 | TGAAGAAAGTACTCATAGGGCTAGG | 59.401 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2681 | 3222 | 6.547880 | TCTGAAGAAAGTACTCATAGGGCTAG | 59.452 | 42.308 | 0.00 | 0.00 | 0.00 | 3.42 |
2682 | 3223 | 6.321690 | GTCTGAAGAAAGTACTCATAGGGCTA | 59.678 | 42.308 | 0.00 | 0.00 | 0.00 | 3.93 |
2683 | 3224 | 5.128008 | GTCTGAAGAAAGTACTCATAGGGCT | 59.872 | 44.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2684 | 3225 | 5.353111 | GTCTGAAGAAAGTACTCATAGGGC | 58.647 | 45.833 | 0.00 | 0.00 | 0.00 | 5.19 |
2685 | 3226 | 5.422331 | TGGTCTGAAGAAAGTACTCATAGGG | 59.578 | 44.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2686 | 3227 | 6.531503 | TGGTCTGAAGAAAGTACTCATAGG | 57.468 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2687 | 3228 | 8.091449 | AGTTTGGTCTGAAGAAAGTACTCATAG | 58.909 | 37.037 | 0.00 | 0.00 | 0.00 | 2.23 |
2688 | 3229 | 7.872993 | CAGTTTGGTCTGAAGAAAGTACTCATA | 59.127 | 37.037 | 0.00 | 0.00 | 37.61 | 2.15 |
2689 | 3230 | 6.708054 | CAGTTTGGTCTGAAGAAAGTACTCAT | 59.292 | 38.462 | 0.00 | 0.00 | 37.61 | 2.90 |
2690 | 3231 | 6.049149 | CAGTTTGGTCTGAAGAAAGTACTCA | 58.951 | 40.000 | 0.00 | 0.00 | 37.61 | 3.41 |
2691 | 3232 | 6.201234 | GTCAGTTTGGTCTGAAGAAAGTACTC | 59.799 | 42.308 | 0.00 | 0.00 | 44.48 | 2.59 |
2692 | 3233 | 6.049790 | GTCAGTTTGGTCTGAAGAAAGTACT | 58.950 | 40.000 | 0.00 | 0.00 | 44.48 | 2.73 |
2693 | 3234 | 5.815740 | TGTCAGTTTGGTCTGAAGAAAGTAC | 59.184 | 40.000 | 0.00 | 0.00 | 44.48 | 2.73 |
2694 | 3235 | 5.984725 | TGTCAGTTTGGTCTGAAGAAAGTA | 58.015 | 37.500 | 0.00 | 0.00 | 44.48 | 2.24 |
2695 | 3236 | 4.843728 | TGTCAGTTTGGTCTGAAGAAAGT | 58.156 | 39.130 | 0.00 | 0.00 | 44.48 | 2.66 |
2696 | 3237 | 5.118990 | TCTGTCAGTTTGGTCTGAAGAAAG | 58.881 | 41.667 | 0.00 | 0.00 | 44.48 | 2.62 |
2697 | 3238 | 5.097742 | TCTGTCAGTTTGGTCTGAAGAAA | 57.902 | 39.130 | 0.00 | 0.00 | 44.48 | 2.52 |
2698 | 3239 | 4.753516 | TCTGTCAGTTTGGTCTGAAGAA | 57.246 | 40.909 | 0.00 | 0.00 | 44.48 | 2.52 |
2699 | 3240 | 4.344968 | TGATCTGTCAGTTTGGTCTGAAGA | 59.655 | 41.667 | 0.00 | 5.04 | 44.48 | 2.87 |
2700 | 3241 | 4.635223 | TGATCTGTCAGTTTGGTCTGAAG | 58.365 | 43.478 | 0.00 | 0.50 | 44.48 | 3.02 |
2701 | 3242 | 4.687901 | TGATCTGTCAGTTTGGTCTGAA | 57.312 | 40.909 | 0.00 | 0.00 | 44.48 | 3.02 |
2702 | 3243 | 4.529769 | AGATGATCTGTCAGTTTGGTCTGA | 59.470 | 41.667 | 0.00 | 0.00 | 41.40 | 3.27 |
2703 | 3244 | 4.829968 | AGATGATCTGTCAGTTTGGTCTG | 58.170 | 43.478 | 0.00 | 0.00 | 37.87 | 3.51 |
2704 | 3245 | 5.012458 | TCAAGATGATCTGTCAGTTTGGTCT | 59.988 | 40.000 | 0.00 | 0.00 | 37.87 | 3.85 |
2705 | 3246 | 5.240891 | TCAAGATGATCTGTCAGTTTGGTC | 58.759 | 41.667 | 0.00 | 0.00 | 37.87 | 4.02 |
2706 | 3247 | 5.012458 | TCTCAAGATGATCTGTCAGTTTGGT | 59.988 | 40.000 | 0.00 | 0.00 | 37.87 | 3.67 |
2707 | 3248 | 5.485620 | TCTCAAGATGATCTGTCAGTTTGG | 58.514 | 41.667 | 0.00 | 0.00 | 37.87 | 3.28 |
2708 | 3249 | 7.333672 | TCAATCTCAAGATGATCTGTCAGTTTG | 59.666 | 37.037 | 0.00 | 4.76 | 37.87 | 2.93 |
2709 | 3250 | 7.333921 | GTCAATCTCAAGATGATCTGTCAGTTT | 59.666 | 37.037 | 0.00 | 0.00 | 37.87 | 2.66 |
2710 | 3251 | 6.817641 | GTCAATCTCAAGATGATCTGTCAGTT | 59.182 | 38.462 | 0.00 | 0.00 | 37.87 | 3.16 |
2711 | 3252 | 6.339730 | GTCAATCTCAAGATGATCTGTCAGT | 58.660 | 40.000 | 0.00 | 0.00 | 37.87 | 3.41 |
2712 | 3253 | 5.459434 | CGTCAATCTCAAGATGATCTGTCAG | 59.541 | 44.000 | 0.00 | 0.00 | 37.87 | 3.51 |
2713 | 3254 | 5.126061 | TCGTCAATCTCAAGATGATCTGTCA | 59.874 | 40.000 | 0.00 | 0.00 | 39.04 | 3.58 |
2714 | 3255 | 5.586339 | TCGTCAATCTCAAGATGATCTGTC | 58.414 | 41.667 | 0.00 | 0.00 | 34.49 | 3.51 |
2715 | 3256 | 5.588958 | TCGTCAATCTCAAGATGATCTGT | 57.411 | 39.130 | 0.00 | 0.00 | 34.49 | 3.41 |
2718 | 3259 | 6.579583 | CGATTTCGTCAATCTCAAGATGATC | 58.420 | 40.000 | 8.00 | 0.00 | 39.50 | 2.92 |
2742 | 3283 | 5.621634 | CGTCGACTGATAATACATCTGTGAC | 59.378 | 44.000 | 14.70 | 8.27 | 31.74 | 3.67 |
2743 | 3284 | 5.277828 | CCGTCGACTGATAATACATCTGTGA | 60.278 | 44.000 | 14.70 | 0.00 | 31.74 | 3.58 |
2748 | 3289 | 5.049612 | TGTCTCCGTCGACTGATAATACATC | 60.050 | 44.000 | 14.70 | 0.00 | 35.00 | 3.06 |
2750 | 3291 | 4.193865 | TGTCTCCGTCGACTGATAATACA | 58.806 | 43.478 | 14.70 | 11.18 | 35.00 | 2.29 |
2751 | 3292 | 4.808077 | TGTCTCCGTCGACTGATAATAC | 57.192 | 45.455 | 14.70 | 8.96 | 35.00 | 1.89 |
2752 | 3293 | 5.306394 | AGATGTCTCCGTCGACTGATAATA | 58.694 | 41.667 | 14.70 | 3.05 | 35.00 | 0.98 |
2756 | 3297 | 1.944024 | GAGATGTCTCCGTCGACTGAT | 59.056 | 52.381 | 14.70 | 0.00 | 37.02 | 2.90 |
2757 | 3298 | 1.370609 | GAGATGTCTCCGTCGACTGA | 58.629 | 55.000 | 14.70 | 11.91 | 37.02 | 3.41 |
2758 | 3299 | 3.907927 | GAGATGTCTCCGTCGACTG | 57.092 | 57.895 | 14.70 | 7.40 | 37.02 | 3.51 |
2769 | 3310 | 3.493877 | CGCATTCAATGAGAGGAGATGTC | 59.506 | 47.826 | 0.00 | 0.00 | 31.20 | 3.06 |
2778 | 3319 | 3.258228 | TCTTTACGCGCATTCAATGAGA | 58.742 | 40.909 | 5.73 | 0.00 | 31.20 | 3.27 |
2781 | 3322 | 3.902465 | GCTATCTTTACGCGCATTCAATG | 59.098 | 43.478 | 5.73 | 0.00 | 0.00 | 2.82 |
2782 | 3323 | 3.809832 | AGCTATCTTTACGCGCATTCAAT | 59.190 | 39.130 | 5.73 | 0.00 | 0.00 | 2.57 |
2783 | 3324 | 3.001228 | CAGCTATCTTTACGCGCATTCAA | 59.999 | 43.478 | 5.73 | 0.00 | 0.00 | 2.69 |
2784 | 3325 | 2.539688 | CAGCTATCTTTACGCGCATTCA | 59.460 | 45.455 | 5.73 | 0.00 | 0.00 | 2.57 |
2785 | 3326 | 2.096713 | CCAGCTATCTTTACGCGCATTC | 60.097 | 50.000 | 5.73 | 0.00 | 0.00 | 2.67 |
2787 | 3328 | 1.502231 | CCAGCTATCTTTACGCGCAT | 58.498 | 50.000 | 5.73 | 0.00 | 0.00 | 4.73 |
2788 | 3329 | 1.151777 | GCCAGCTATCTTTACGCGCA | 61.152 | 55.000 | 5.73 | 0.00 | 0.00 | 6.09 |
2791 | 3332 | 3.372660 | ACTAGCCAGCTATCTTTACGC | 57.627 | 47.619 | 0.00 | 0.00 | 0.00 | 4.42 |
2808 | 3349 | 8.743714 | CACTAGTATCAGATGGATGCATTACTA | 58.256 | 37.037 | 12.96 | 12.96 | 40.69 | 1.82 |
2814 | 3355 | 4.895297 | TGACACTAGTATCAGATGGATGCA | 59.105 | 41.667 | 0.00 | 0.00 | 40.69 | 3.96 |
2815 | 3356 | 5.226396 | GTGACACTAGTATCAGATGGATGC | 58.774 | 45.833 | 3.52 | 0.00 | 38.74 | 3.91 |
2834 | 4703 | 1.336755 | ACCAAAATTGCTCGTGGTGAC | 59.663 | 47.619 | 0.00 | 0.00 | 42.79 | 3.67 |
2842 | 4711 | 4.462483 | TGGGATACTTCACCAAAATTGCTC | 59.538 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
2869 | 4738 | 6.593770 | TCTTGCAATGATACATGTTCTAACGT | 59.406 | 34.615 | 2.30 | 0.00 | 0.00 | 3.99 |
2884 | 4753 | 1.980951 | GCGACCGCATCTTGCAATGA | 61.981 | 55.000 | 9.73 | 0.00 | 45.36 | 2.57 |
2887 | 4756 | 3.787676 | CGCGACCGCATCTTGCAA | 61.788 | 61.111 | 14.91 | 0.00 | 45.36 | 4.08 |
2894 | 4763 | 2.658593 | GTGCTATCGCGACCGCAT | 60.659 | 61.111 | 29.09 | 10.57 | 42.06 | 4.73 |
2901 | 4770 | 3.743886 | TGATAACTATCGTGCTATCGCG | 58.256 | 45.455 | 0.00 | 0.00 | 46.68 | 5.87 |
2903 | 4772 | 7.640630 | GGAAGTATGATAACTATCGTGCTATCG | 59.359 | 40.741 | 9.20 | 0.00 | 41.67 | 2.92 |
2952 | 5192 | 8.046708 | ACAAGATATCCTGTAATTAGTGCACAA | 58.953 | 33.333 | 21.04 | 11.68 | 0.00 | 3.33 |
2954 | 5431 | 7.495934 | ACACAAGATATCCTGTAATTAGTGCAC | 59.504 | 37.037 | 9.40 | 9.40 | 0.00 | 4.57 |
2956 | 5433 | 8.438676 | AACACAAGATATCCTGTAATTAGTGC | 57.561 | 34.615 | 6.65 | 0.00 | 0.00 | 4.40 |
2963 | 5440 | 7.195374 | AGCCTTAACACAAGATATCCTGTAA | 57.805 | 36.000 | 6.65 | 0.00 | 0.00 | 2.41 |
2966 | 5443 | 6.821388 | ACTAGCCTTAACACAAGATATCCTG | 58.179 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2967 | 5444 | 7.125811 | TCAACTAGCCTTAACACAAGATATCCT | 59.874 | 37.037 | 0.00 | 0.00 | 0.00 | 3.24 |
2974 | 5451 | 6.373779 | CACAATCAACTAGCCTTAACACAAG | 58.626 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2976 | 5453 | 4.759693 | CCACAATCAACTAGCCTTAACACA | 59.240 | 41.667 | 0.00 | 0.00 | 0.00 | 3.72 |
2992 | 5470 | 7.337942 | AGTCATCCTTCTTTGTATTCCACAATC | 59.662 | 37.037 | 0.00 | 0.00 | 46.38 | 2.67 |
2993 | 5471 | 7.121759 | CAGTCATCCTTCTTTGTATTCCACAAT | 59.878 | 37.037 | 0.00 | 0.00 | 46.38 | 2.71 |
2994 | 5472 | 6.430925 | CAGTCATCCTTCTTTGTATTCCACAA | 59.569 | 38.462 | 0.00 | 0.00 | 45.49 | 3.33 |
2995 | 5473 | 5.939883 | CAGTCATCCTTCTTTGTATTCCACA | 59.060 | 40.000 | 0.00 | 0.00 | 34.51 | 4.17 |
2996 | 5474 | 5.940470 | ACAGTCATCCTTCTTTGTATTCCAC | 59.060 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2997 | 5475 | 6.126863 | ACAGTCATCCTTCTTTGTATTCCA | 57.873 | 37.500 | 0.00 | 0.00 | 0.00 | 3.53 |
2998 | 5476 | 6.623767 | GCAACAGTCATCCTTCTTTGTATTCC | 60.624 | 42.308 | 0.00 | 0.00 | 0.00 | 3.01 |
2999 | 5477 | 6.072508 | TGCAACAGTCATCCTTCTTTGTATTC | 60.073 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
3000 | 5478 | 5.769662 | TGCAACAGTCATCCTTCTTTGTATT | 59.230 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3001 | 5479 | 5.316167 | TGCAACAGTCATCCTTCTTTGTAT | 58.684 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
3002 | 5480 | 4.713553 | TGCAACAGTCATCCTTCTTTGTA | 58.286 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
3003 | 5481 | 3.554934 | TGCAACAGTCATCCTTCTTTGT | 58.445 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
3004 | 5482 | 4.572985 | TTGCAACAGTCATCCTTCTTTG | 57.427 | 40.909 | 0.00 | 0.00 | 0.00 | 2.77 |
3005 | 5483 | 7.318141 | CAATATTGCAACAGTCATCCTTCTTT | 58.682 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
3006 | 5484 | 6.860080 | CAATATTGCAACAGTCATCCTTCTT | 58.140 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3007 | 5485 | 6.446781 | CAATATTGCAACAGTCATCCTTCT | 57.553 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
3024 | 5502 | 4.461198 | CTCCCTCCTAAAACCGCAATATT | 58.539 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
3031 | 5509 | 2.039348 | TCAAACCTCCCTCCTAAAACCG | 59.961 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
3040 | 5518 | 5.276461 | ACAAACAAAATCAAACCTCCCTC | 57.724 | 39.130 | 0.00 | 0.00 | 0.00 | 4.30 |
3041 | 5519 | 5.427378 | CAACAAACAAAATCAAACCTCCCT | 58.573 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
3044 | 5522 | 7.835634 | TTACCAACAAACAAAATCAAACCTC | 57.164 | 32.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3045 | 5523 | 7.826744 | ACATTACCAACAAACAAAATCAAACCT | 59.173 | 29.630 | 0.00 | 0.00 | 0.00 | 3.50 |
3047 | 5525 | 9.833182 | AAACATTACCAACAAACAAAATCAAAC | 57.167 | 25.926 | 0.00 | 0.00 | 0.00 | 2.93 |
3053 | 5531 | 9.490379 | ACACTTAAACATTACCAACAAACAAAA | 57.510 | 25.926 | 0.00 | 0.00 | 0.00 | 2.44 |
3063 | 5541 | 4.649674 | TGGCCAAACACTTAAACATTACCA | 59.350 | 37.500 | 0.61 | 0.00 | 0.00 | 3.25 |
3092 | 5570 | 6.468543 | AGTAGAGGACTGAATTGGAAGAAAC | 58.531 | 40.000 | 0.00 | 0.00 | 36.87 | 2.78 |
3141 | 5619 | 7.430441 | ACGGCTTACTTTGAATAATTGTGTTT | 58.570 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
3146 | 5624 | 8.826710 | TGATCTACGGCTTACTTTGAATAATTG | 58.173 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
3149 | 5627 | 7.324935 | TGTGATCTACGGCTTACTTTGAATAA | 58.675 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
3179 | 5657 | 2.372172 | AGTCGGGTGATTTTCACTTCCT | 59.628 | 45.455 | 7.51 | 0.00 | 46.19 | 3.36 |
3194 | 5672 | 6.367149 | CACACATATGATCATTAAGAGTCGGG | 59.633 | 42.308 | 14.65 | 0.00 | 0.00 | 5.14 |
3197 | 5675 | 8.654230 | ACACACACATATGATCATTAAGAGTC | 57.346 | 34.615 | 14.65 | 0.00 | 0.00 | 3.36 |
3227 | 5705 | 7.724490 | TGTTGGATAGAGACCAGATATATGG | 57.276 | 40.000 | 14.96 | 14.96 | 46.47 | 2.74 |
3235 | 5713 | 5.105187 | TCAGACATTGTTGGATAGAGACCAG | 60.105 | 44.000 | 0.00 | 0.00 | 38.70 | 4.00 |
3251 | 5729 | 9.131791 | GTGGGGTAAATATTTATGTCAGACATT | 57.868 | 33.333 | 21.30 | 6.41 | 39.88 | 2.71 |
3252 | 5730 | 8.278639 | TGTGGGGTAAATATTTATGTCAGACAT | 58.721 | 33.333 | 20.04 | 20.04 | 42.35 | 3.06 |
3254 | 5732 | 7.554835 | TGTGTGGGGTAAATATTTATGTCAGAC | 59.445 | 37.037 | 11.00 | 15.34 | 0.00 | 3.51 |
3256 | 5734 | 7.468631 | GCTGTGTGGGGTAAATATTTATGTCAG | 60.469 | 40.741 | 11.00 | 12.31 | 0.00 | 3.51 |
3258 | 5736 | 6.320164 | TGCTGTGTGGGGTAAATATTTATGTC | 59.680 | 38.462 | 11.00 | 4.84 | 0.00 | 3.06 |
3262 | 5740 | 7.122715 | AGATTGCTGTGTGGGGTAAATATTTA | 58.877 | 34.615 | 3.71 | 3.71 | 0.00 | 1.40 |
3272 | 5750 | 2.026822 | ACTAAGAGATTGCTGTGTGGGG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.