Multiple sequence alignment - TraesCS2A01G060300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G060300 chr2A 100.000 3306 0 0 1 3306 26882403 26879098 0.000000e+00 6106.0
1 TraesCS2A01G060300 chr2A 84.580 441 65 3 1044 1481 26960474 26960034 5.070000e-118 435.0
2 TraesCS2A01G060300 chr2A 84.634 423 47 8 2109 2522 26958393 26957980 3.970000e-109 405.0
3 TraesCS2A01G060300 chr2A 87.719 57 7 0 1957 2013 185127168 185127224 2.130000e-07 67.6
4 TraesCS2A01G060300 chr2B 92.084 1137 73 7 745 1875 39973663 39972538 0.000000e+00 1585.0
5 TraesCS2A01G060300 chr2B 90.247 769 46 13 2014 2766 39972316 39971561 0.000000e+00 977.0
6 TraesCS2A01G060300 chr2B 87.879 363 36 6 210 569 210710679 210710322 1.420000e-113 420.0
7 TraesCS2A01G060300 chr2B 77.905 611 101 25 1014 1617 40285823 40285240 1.890000e-92 350.0
8 TraesCS2A01G060300 chr2B 91.228 57 5 0 3230 3286 39971200 39971144 9.840000e-11 78.7
9 TraesCS2A01G060300 chr6A 95.965 570 22 1 1 570 583133248 583133816 0.000000e+00 924.0
10 TraesCS2A01G060300 chr6A 89.474 57 5 1 1957 2013 615245601 615245656 1.650000e-08 71.3
11 TraesCS2A01G060300 chr2D 86.518 764 85 11 2109 2863 24914776 24915530 0.000000e+00 824.0
12 TraesCS2A01G060300 chr2D 88.889 252 23 3 2617 2864 637156421 637156671 4.140000e-79 305.0
13 TraesCS2A01G060300 chr2D 73.797 748 139 36 1011 1741 24546409 24547116 3.300000e-60 243.0
14 TraesCS2A01G060300 chr2D 82.105 190 30 3 580 766 209113353 209113165 3.410000e-35 159.0
15 TraesCS2A01G060300 chr7A 93.529 510 29 4 63 571 624638854 624639360 0.000000e+00 756.0
16 TraesCS2A01G060300 chrUn 90.592 574 47 6 1 570 110693956 110694526 0.000000e+00 754.0
17 TraesCS2A01G060300 chr5B 89.547 574 56 4 1 572 335952180 335951609 0.000000e+00 725.0
18 TraesCS2A01G060300 chr5B 83.077 195 29 4 581 773 7379340 7379532 1.220000e-39 174.0
19 TraesCS2A01G060300 chr5B 81.281 203 36 1 573 773 7136766 7136968 2.640000e-36 163.0
20 TraesCS2A01G060300 chr1B 89.465 579 48 7 1 576 42019475 42018907 0.000000e+00 719.0
21 TraesCS2A01G060300 chr7B 89.343 563 55 4 1 559 143251209 143251770 0.000000e+00 702.0
22 TraesCS2A01G060300 chr7D 88.256 579 54 13 1 570 84324992 84324419 0.000000e+00 680.0
23 TraesCS2A01G060300 chr7D 86.634 202 24 2 574 773 632121263 632121463 1.540000e-53 220.0
24 TraesCS2A01G060300 chr6B 85.911 582 67 10 1 570 654502685 654502107 1.010000e-169 606.0
25 TraesCS2A01G060300 chr6B 96.875 32 1 0 1982 2013 543699264 543699233 2.000000e-03 54.7
26 TraesCS2A01G060300 chr4B 84.574 188 27 2 571 756 551073580 551073393 5.630000e-43 185.0
27 TraesCS2A01G060300 chr4D 81.863 204 34 2 573 774 495615640 495615438 5.670000e-38 169.0
28 TraesCS2A01G060300 chr4D 81.726 197 26 7 573 767 405721114 405721302 4.420000e-34 156.0
29 TraesCS2A01G060300 chr1A 83.799 179 26 2 572 748 559048682 559048859 2.040000e-37 167.0
30 TraesCS2A01G060300 chr1A 97.059 34 1 0 1981 2014 267922324 267922291 1.280000e-04 58.4
31 TraesCS2A01G060300 chr6D 82.258 186 29 4 572 756 380793817 380793635 1.230000e-34 158.0
32 TraesCS2A01G060300 chr5A 100.000 66 0 0 1430 1495 467047388 467047323 4.480000e-24 122.0
33 TraesCS2A01G060300 chr5D 89.474 57 5 1 1957 2013 311748323 311748268 1.650000e-08 71.3
34 TraesCS2A01G060300 chr3A 94.595 37 1 1 1978 2014 11594912 11594947 4.610000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G060300 chr2A 26879098 26882403 3305 True 6106.000000 6106 100.000000 1 3306 1 chr2A.!!$R1 3305
1 TraesCS2A01G060300 chr2A 26957980 26960474 2494 True 420.000000 435 84.607000 1044 2522 2 chr2A.!!$R2 1478
2 TraesCS2A01G060300 chr2B 39971144 39973663 2519 True 880.233333 1585 91.186333 745 3286 3 chr2B.!!$R3 2541
3 TraesCS2A01G060300 chr2B 40285240 40285823 583 True 350.000000 350 77.905000 1014 1617 1 chr2B.!!$R1 603
4 TraesCS2A01G060300 chr6A 583133248 583133816 568 False 924.000000 924 95.965000 1 570 1 chr6A.!!$F1 569
5 TraesCS2A01G060300 chr2D 24914776 24915530 754 False 824.000000 824 86.518000 2109 2863 1 chr2D.!!$F2 754
6 TraesCS2A01G060300 chr2D 24546409 24547116 707 False 243.000000 243 73.797000 1011 1741 1 chr2D.!!$F1 730
7 TraesCS2A01G060300 chr7A 624638854 624639360 506 False 756.000000 756 93.529000 63 571 1 chr7A.!!$F1 508
8 TraesCS2A01G060300 chrUn 110693956 110694526 570 False 754.000000 754 90.592000 1 570 1 chrUn.!!$F1 569
9 TraesCS2A01G060300 chr5B 335951609 335952180 571 True 725.000000 725 89.547000 1 572 1 chr5B.!!$R1 571
10 TraesCS2A01G060300 chr1B 42018907 42019475 568 True 719.000000 719 89.465000 1 576 1 chr1B.!!$R1 575
11 TraesCS2A01G060300 chr7B 143251209 143251770 561 False 702.000000 702 89.343000 1 559 1 chr7B.!!$F1 558
12 TraesCS2A01G060300 chr7D 84324419 84324992 573 True 680.000000 680 88.256000 1 570 1 chr7D.!!$R1 569
13 TraesCS2A01G060300 chr6B 654502107 654502685 578 True 606.000000 606 85.911000 1 570 1 chr6B.!!$R2 569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
675 691 0.104304 AGATCCGTCGTGCCCATAAC 59.896 55.0 0.0 0.0 0.00 1.89 F
1663 2824 0.039764 ACTGGACCTCGACCATGAGA 59.960 55.0 0.0 0.0 38.28 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1970 3331 0.046397 AGGCCAGGGGATAACCTTCT 59.954 55.0 5.01 0.00 39.34 2.85 R
2886 4275 0.523072 CAAGACCGCAATTGACTGGG 59.477 55.0 10.34 6.67 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
483 499 3.340034 CCCGTTAGTCATTAGGCACAAA 58.660 45.455 0.00 0.00 0.00 2.83
521 537 1.339727 GCCCTGTCCGAAAAGTGGTAT 60.340 52.381 0.00 0.00 0.00 2.73
572 588 6.373216 TGATGGTTTTGGGTAAATAACTCTCG 59.627 38.462 0.00 0.00 0.00 4.04
573 589 5.623169 TGGTTTTGGGTAAATAACTCTCGT 58.377 37.500 0.00 0.00 0.00 4.18
574 590 5.702209 TGGTTTTGGGTAAATAACTCTCGTC 59.298 40.000 0.00 0.00 0.00 4.20
575 591 5.936372 GGTTTTGGGTAAATAACTCTCGTCT 59.064 40.000 0.00 0.00 0.00 4.18
576 592 6.429078 GGTTTTGGGTAAATAACTCTCGTCTT 59.571 38.462 0.00 0.00 0.00 3.01
577 593 7.295930 GTTTTGGGTAAATAACTCTCGTCTTG 58.704 38.462 0.00 0.00 0.00 3.02
578 594 5.733620 TGGGTAAATAACTCTCGTCTTGT 57.266 39.130 0.00 0.00 0.00 3.16
579 595 5.717119 TGGGTAAATAACTCTCGTCTTGTC 58.283 41.667 0.00 0.00 0.00 3.18
580 596 5.479375 TGGGTAAATAACTCTCGTCTTGTCT 59.521 40.000 0.00 0.00 0.00 3.41
581 597 6.014840 TGGGTAAATAACTCTCGTCTTGTCTT 60.015 38.462 0.00 0.00 0.00 3.01
582 598 6.530887 GGGTAAATAACTCTCGTCTTGTCTTC 59.469 42.308 0.00 0.00 0.00 2.87
583 599 7.088905 GGTAAATAACTCTCGTCTTGTCTTCA 58.911 38.462 0.00 0.00 0.00 3.02
584 600 7.760340 GGTAAATAACTCTCGTCTTGTCTTCAT 59.240 37.037 0.00 0.00 0.00 2.57
585 601 7.588143 AAATAACTCTCGTCTTGTCTTCATG 57.412 36.000 0.00 0.00 0.00 3.07
586 602 4.855715 AACTCTCGTCTTGTCTTCATGA 57.144 40.909 0.00 0.00 0.00 3.07
587 603 4.433186 ACTCTCGTCTTGTCTTCATGAG 57.567 45.455 0.00 0.00 0.00 2.90
588 604 3.823873 ACTCTCGTCTTGTCTTCATGAGT 59.176 43.478 0.00 0.00 0.00 3.41
589 605 5.004448 ACTCTCGTCTTGTCTTCATGAGTA 58.996 41.667 0.00 0.00 31.58 2.59
590 606 5.123186 ACTCTCGTCTTGTCTTCATGAGTAG 59.877 44.000 0.00 0.00 31.58 2.57
591 607 4.396478 TCTCGTCTTGTCTTCATGAGTAGG 59.604 45.833 0.00 0.00 0.00 3.18
592 608 4.332828 TCGTCTTGTCTTCATGAGTAGGA 58.667 43.478 0.00 0.00 0.00 2.94
593 609 4.156190 TCGTCTTGTCTTCATGAGTAGGAC 59.844 45.833 0.00 4.63 0.00 3.85
594 610 4.082733 CGTCTTGTCTTCATGAGTAGGACA 60.083 45.833 14.43 14.43 35.51 4.02
595 611 5.164954 GTCTTGTCTTCATGAGTAGGACAC 58.835 45.833 16.64 7.45 36.78 3.67
596 612 4.832823 TCTTGTCTTCATGAGTAGGACACA 59.167 41.667 16.64 3.88 36.78 3.72
597 613 5.304357 TCTTGTCTTCATGAGTAGGACACAA 59.696 40.000 16.64 9.61 36.78 3.33
598 614 5.545063 TGTCTTCATGAGTAGGACACAAA 57.455 39.130 14.43 0.00 32.91 2.83
599 615 5.297547 TGTCTTCATGAGTAGGACACAAAC 58.702 41.667 14.43 0.00 32.91 2.93
600 616 4.691216 GTCTTCATGAGTAGGACACAAACC 59.309 45.833 0.00 0.00 0.00 3.27
601 617 3.695830 TCATGAGTAGGACACAAACCC 57.304 47.619 0.00 0.00 0.00 4.11
602 618 3.248024 TCATGAGTAGGACACAAACCCT 58.752 45.455 0.00 0.00 36.60 4.34
603 619 4.422057 TCATGAGTAGGACACAAACCCTA 58.578 43.478 0.00 0.00 34.11 3.53
604 620 4.841813 TCATGAGTAGGACACAAACCCTAA 59.158 41.667 0.00 0.00 36.84 2.69
605 621 4.612264 TGAGTAGGACACAAACCCTAAC 57.388 45.455 0.00 0.00 36.84 2.34
606 622 3.968649 TGAGTAGGACACAAACCCTAACA 59.031 43.478 0.00 0.00 36.84 2.41
607 623 4.409574 TGAGTAGGACACAAACCCTAACAA 59.590 41.667 0.00 0.00 36.84 2.83
608 624 5.104444 TGAGTAGGACACAAACCCTAACAAA 60.104 40.000 0.00 0.00 36.84 2.83
609 625 5.948842 AGTAGGACACAAACCCTAACAAAT 58.051 37.500 0.00 0.00 36.84 2.32
610 626 6.002082 AGTAGGACACAAACCCTAACAAATC 58.998 40.000 0.00 0.00 36.84 2.17
611 627 5.061721 AGGACACAAACCCTAACAAATCT 57.938 39.130 0.00 0.00 0.00 2.40
612 628 5.070685 AGGACACAAACCCTAACAAATCTC 58.929 41.667 0.00 0.00 0.00 2.75
613 629 4.083484 GGACACAAACCCTAACAAATCTCG 60.083 45.833 0.00 0.00 0.00 4.04
614 630 4.710324 ACACAAACCCTAACAAATCTCGA 58.290 39.130 0.00 0.00 0.00 4.04
615 631 5.127491 ACACAAACCCTAACAAATCTCGAA 58.873 37.500 0.00 0.00 0.00 3.71
616 632 5.238650 ACACAAACCCTAACAAATCTCGAAG 59.761 40.000 0.00 0.00 0.00 3.79
617 633 5.468746 CACAAACCCTAACAAATCTCGAAGA 59.531 40.000 0.00 0.00 0.00 2.87
618 634 5.469084 ACAAACCCTAACAAATCTCGAAGAC 59.531 40.000 0.00 0.00 0.00 3.01
619 635 4.884668 ACCCTAACAAATCTCGAAGACA 57.115 40.909 0.00 0.00 0.00 3.41
620 636 4.566987 ACCCTAACAAATCTCGAAGACAC 58.433 43.478 0.00 0.00 0.00 3.67
621 637 3.612860 CCCTAACAAATCTCGAAGACACG 59.387 47.826 0.00 0.00 0.00 4.49
622 638 4.235360 CCTAACAAATCTCGAAGACACGT 58.765 43.478 0.00 0.00 34.70 4.49
623 639 4.323868 CCTAACAAATCTCGAAGACACGTC 59.676 45.833 0.00 0.00 34.70 4.34
624 640 3.644884 ACAAATCTCGAAGACACGTCT 57.355 42.857 0.00 0.00 42.75 4.18
625 641 4.761235 ACAAATCTCGAAGACACGTCTA 57.239 40.909 0.00 0.00 39.39 2.59
626 642 5.117355 ACAAATCTCGAAGACACGTCTAA 57.883 39.130 0.00 0.00 39.39 2.10
627 643 5.526115 ACAAATCTCGAAGACACGTCTAAA 58.474 37.500 0.00 0.00 39.39 1.85
628 644 5.981315 ACAAATCTCGAAGACACGTCTAAAA 59.019 36.000 0.00 0.00 39.39 1.52
629 645 6.477688 ACAAATCTCGAAGACACGTCTAAAAA 59.522 34.615 0.00 0.00 39.39 1.94
630 646 7.170998 ACAAATCTCGAAGACACGTCTAAAAAT 59.829 33.333 0.00 0.00 39.39 1.82
631 647 6.633668 ATCTCGAAGACACGTCTAAAAATG 57.366 37.500 0.00 0.00 39.39 2.32
632 648 4.921515 TCTCGAAGACACGTCTAAAAATGG 59.078 41.667 0.00 0.00 39.39 3.16
633 649 4.873817 TCGAAGACACGTCTAAAAATGGA 58.126 39.130 0.00 0.00 39.39 3.41
634 650 5.475719 TCGAAGACACGTCTAAAAATGGAT 58.524 37.500 0.00 0.00 39.39 3.41
635 651 5.575606 TCGAAGACACGTCTAAAAATGGATC 59.424 40.000 0.00 0.00 39.39 3.36
636 652 5.220416 CGAAGACACGTCTAAAAATGGATCC 60.220 44.000 4.20 4.20 39.39 3.36
637 653 4.514401 AGACACGTCTAAAAATGGATCCC 58.486 43.478 9.90 0.00 38.35 3.85
638 654 4.225267 AGACACGTCTAAAAATGGATCCCT 59.775 41.667 9.90 0.00 38.35 4.20
639 655 4.514401 ACACGTCTAAAAATGGATCCCTC 58.486 43.478 9.90 0.00 0.00 4.30
640 656 3.877508 CACGTCTAAAAATGGATCCCTCC 59.122 47.826 9.90 0.00 42.45 4.30
641 657 3.118000 ACGTCTAAAAATGGATCCCTCCC 60.118 47.826 9.90 0.00 41.29 4.30
642 658 3.118038 CGTCTAAAAATGGATCCCTCCCA 60.118 47.826 9.90 0.00 41.29 4.37
643 659 4.207955 GTCTAAAAATGGATCCCTCCCAC 58.792 47.826 9.90 0.00 41.29 4.61
644 660 2.550277 AAAAATGGATCCCTCCCACC 57.450 50.000 9.90 0.00 41.29 4.61
645 661 0.258774 AAAATGGATCCCTCCCACCG 59.741 55.000 9.90 0.00 41.29 4.94
646 662 1.645402 AAATGGATCCCTCCCACCGG 61.645 60.000 9.90 0.00 41.29 5.28
649 665 3.407967 GATCCCTCCCACCGGCAA 61.408 66.667 0.00 0.00 0.00 4.52
650 666 3.406595 GATCCCTCCCACCGGCAAG 62.407 68.421 0.00 0.00 0.00 4.01
663 679 4.162690 GCAAGGGCCGAGATCCGT 62.163 66.667 0.00 0.00 36.31 4.69
664 680 2.107141 CAAGGGCCGAGATCCGTC 59.893 66.667 0.00 0.00 36.31 4.79
665 681 3.528370 AAGGGCCGAGATCCGTCG 61.528 66.667 0.00 0.00 39.77 5.12
666 682 4.816984 AGGGCCGAGATCCGTCGT 62.817 66.667 0.00 0.00 38.32 4.34
667 683 4.570663 GGGCCGAGATCCGTCGTG 62.571 72.222 0.00 0.00 38.32 4.35
670 686 4.570663 CCGAGATCCGTCGTGCCC 62.571 72.222 3.97 0.00 38.32 5.36
671 687 3.822192 CGAGATCCGTCGTGCCCA 61.822 66.667 0.00 0.00 35.14 5.36
672 688 2.815308 GAGATCCGTCGTGCCCAT 59.185 61.111 0.00 0.00 0.00 4.00
673 689 1.792118 CGAGATCCGTCGTGCCCATA 61.792 60.000 0.00 0.00 35.14 2.74
674 690 0.387929 GAGATCCGTCGTGCCCATAA 59.612 55.000 0.00 0.00 0.00 1.90
675 691 0.104304 AGATCCGTCGTGCCCATAAC 59.896 55.000 0.00 0.00 0.00 1.89
676 692 0.878961 GATCCGTCGTGCCCATAACC 60.879 60.000 0.00 0.00 0.00 2.85
677 693 2.319890 ATCCGTCGTGCCCATAACCC 62.320 60.000 0.00 0.00 0.00 4.11
678 694 2.582436 CGTCGTGCCCATAACCCT 59.418 61.111 0.00 0.00 0.00 4.34
679 695 1.678598 CCGTCGTGCCCATAACCCTA 61.679 60.000 0.00 0.00 0.00 3.53
680 696 0.176219 CGTCGTGCCCATAACCCTAA 59.824 55.000 0.00 0.00 0.00 2.69
681 697 1.805120 CGTCGTGCCCATAACCCTAAG 60.805 57.143 0.00 0.00 0.00 2.18
682 698 0.834612 TCGTGCCCATAACCCTAAGG 59.165 55.000 0.00 0.00 40.04 2.69
683 699 0.818040 CGTGCCCATAACCCTAAGGC 60.818 60.000 0.00 0.00 44.13 4.35
684 700 0.467474 GTGCCCATAACCCTAAGGCC 60.467 60.000 0.00 0.00 43.18 5.19
685 701 0.921749 TGCCCATAACCCTAAGGCCA 60.922 55.000 5.01 0.00 43.18 5.36
686 702 0.467474 GCCCATAACCCTAAGGCCAC 60.467 60.000 5.01 0.00 37.66 5.01
687 703 0.185175 CCCATAACCCTAAGGCCACC 59.815 60.000 5.01 0.00 36.11 4.61
688 704 0.923358 CCATAACCCTAAGGCCACCA 59.077 55.000 5.01 0.00 36.11 4.17
689 705 1.286553 CCATAACCCTAAGGCCACCAA 59.713 52.381 5.01 0.00 36.11 3.67
690 706 2.291930 CCATAACCCTAAGGCCACCAAA 60.292 50.000 5.01 0.00 36.11 3.28
691 707 2.891191 TAACCCTAAGGCCACCAAAG 57.109 50.000 5.01 0.00 36.11 2.77
692 708 1.154430 AACCCTAAGGCCACCAAAGA 58.846 50.000 5.01 0.00 36.11 2.52
693 709 0.404426 ACCCTAAGGCCACCAAAGAC 59.596 55.000 5.01 0.00 36.11 3.01
694 710 0.676782 CCCTAAGGCCACCAAAGACG 60.677 60.000 5.01 0.00 0.00 4.18
695 711 0.323629 CCTAAGGCCACCAAAGACGA 59.676 55.000 5.01 0.00 0.00 4.20
696 712 1.676014 CCTAAGGCCACCAAAGACGAG 60.676 57.143 5.01 0.00 0.00 4.18
697 713 0.323629 TAAGGCCACCAAAGACGAGG 59.676 55.000 5.01 0.00 0.00 4.63
698 714 1.705997 AAGGCCACCAAAGACGAGGT 61.706 55.000 5.01 0.00 39.10 3.85
705 721 0.530744 CCAAAGACGAGGTGGATCGA 59.469 55.000 2.78 0.00 45.56 3.59
706 722 1.630148 CAAAGACGAGGTGGATCGAC 58.370 55.000 2.78 0.00 45.56 4.20
707 723 0.170561 AAAGACGAGGTGGATCGACG 59.829 55.000 2.78 0.00 45.56 5.12
708 724 2.267681 AAGACGAGGTGGATCGACGC 62.268 60.000 2.78 0.00 45.56 5.19
709 725 3.753070 GACGAGGTGGATCGACGCC 62.753 68.421 2.78 0.00 45.56 5.68
710 726 3.822192 CGAGGTGGATCGACGCCA 61.822 66.667 8.20 6.57 45.56 5.69
711 727 2.105128 GAGGTGGATCGACGCCAG 59.895 66.667 8.98 0.00 43.47 4.85
714 730 3.188786 GTGGATCGACGCCAGCAC 61.189 66.667 8.98 0.00 35.77 4.40
715 731 4.451150 TGGATCGACGCCAGCACC 62.451 66.667 4.80 0.00 0.00 5.01
729 745 4.263572 CACCGGTGGGAGGCACAA 62.264 66.667 27.57 0.00 36.97 3.33
730 746 3.953775 ACCGGTGGGAGGCACAAG 61.954 66.667 6.12 0.00 36.97 3.16
731 747 3.636231 CCGGTGGGAGGCACAAGA 61.636 66.667 0.00 0.00 34.06 3.02
732 748 2.429930 CGGTGGGAGGCACAAGAA 59.570 61.111 0.00 0.00 0.00 2.52
733 749 1.966451 CGGTGGGAGGCACAAGAAC 60.966 63.158 0.00 0.00 0.00 3.01
734 750 1.603739 GGTGGGAGGCACAAGAACC 60.604 63.158 0.00 0.00 0.00 3.62
735 751 1.603739 GTGGGAGGCACAAGAACCC 60.604 63.158 0.00 0.00 40.79 4.11
736 752 1.774217 TGGGAGGCACAAGAACCCT 60.774 57.895 0.00 0.00 40.98 4.34
737 753 0.474854 TGGGAGGCACAAGAACCCTA 60.475 55.000 0.00 0.00 40.98 3.53
738 754 0.696501 GGGAGGCACAAGAACCCTAA 59.303 55.000 0.00 0.00 37.75 2.69
739 755 1.285078 GGGAGGCACAAGAACCCTAAT 59.715 52.381 0.00 0.00 37.75 1.73
740 756 2.291605 GGGAGGCACAAGAACCCTAATT 60.292 50.000 0.00 0.00 37.75 1.40
741 757 2.755103 GGAGGCACAAGAACCCTAATTG 59.245 50.000 0.00 0.00 0.00 2.32
742 758 2.755103 GAGGCACAAGAACCCTAATTGG 59.245 50.000 0.00 0.00 0.00 3.16
778 794 0.402887 TGAGGAGTCACGTACCTGGA 59.597 55.000 0.00 0.00 33.89 3.86
779 795 0.810016 GAGGAGTCACGTACCTGGAC 59.190 60.000 0.00 1.71 33.89 4.02
780 796 0.404812 AGGAGTCACGTACCTGGACT 59.595 55.000 0.00 5.27 44.12 3.85
784 801 0.669625 GTCACGTACCTGGACTTGGC 60.670 60.000 0.00 0.00 0.00 4.52
812 829 1.003223 GCACGTTAGTTTTTGCCGTCT 60.003 47.619 0.00 0.00 0.00 4.18
821 838 5.508200 AGTTTTTGCCGTCTAAAACATGA 57.492 34.783 16.20 0.00 44.54 3.07
827 844 3.632604 TGCCGTCTAAAACATGAAAACCA 59.367 39.130 0.00 0.00 0.00 3.67
830 847 5.735070 GCCGTCTAAAACATGAAAACCAAGT 60.735 40.000 0.00 0.00 0.00 3.16
838 855 5.356882 ACATGAAAACCAAGTACACGATG 57.643 39.130 0.00 0.00 0.00 3.84
871 888 1.002502 GGGCGCCTTTTAGGTCTGT 60.003 57.895 28.56 0.00 37.80 3.41
904 921 0.392461 GGCACTCGGATGCTACCAAA 60.392 55.000 10.92 0.00 45.38 3.28
927 944 6.392625 AAGAAAAGAAAAACCCTAGCACTC 57.607 37.500 0.00 0.00 0.00 3.51
949 966 3.448686 CGGATATAACGGCTGATGGATC 58.551 50.000 0.00 0.00 0.00 3.36
950 967 3.448686 GGATATAACGGCTGATGGATCG 58.551 50.000 0.00 0.00 0.00 3.69
951 968 3.448686 GATATAACGGCTGATGGATCGG 58.551 50.000 0.00 0.00 36.26 4.18
1004 1026 1.293924 GCGATCAAGGGTGACATGAG 58.706 55.000 0.00 0.00 36.31 2.90
1050 1072 4.106925 CTGCTGTGGCTCCCTCCC 62.107 72.222 0.00 0.00 39.59 4.30
1149 1171 1.215647 CGCCAAGCCTCTCGTAGTT 59.784 57.895 0.00 0.00 0.00 2.24
1195 1224 2.431057 GTGGACGATCTATCAACAGGGT 59.569 50.000 0.00 0.00 0.00 4.34
1196 1225 3.635373 GTGGACGATCTATCAACAGGGTA 59.365 47.826 0.00 0.00 0.00 3.69
1226 1255 1.770658 TCTGTGGAATGGCATCCCTAG 59.229 52.381 3.81 2.80 38.82 3.02
1272 1304 2.108514 CATCGTCGGCACCTGCAAT 61.109 57.895 0.00 0.00 44.36 3.56
1368 1400 4.815108 TCTCTCCCGCCGCTGCTA 62.815 66.667 0.00 0.00 34.43 3.49
1377 1409 2.903357 CCGCTGCTATCCACCACT 59.097 61.111 0.00 0.00 0.00 4.00
1386 1418 2.484868 TATCCACCACTGGCTCCCCA 62.485 60.000 0.00 0.00 37.49 4.96
1418 1453 3.449227 CGTAGGCTGGCACGAGGA 61.449 66.667 16.72 0.00 40.56 3.71
1503 2663 5.163405 CGATAGGAAGGGAAACTCTCATCAA 60.163 44.000 0.00 0.00 0.00 2.57
1578 2738 1.139058 GTCCCGAGATGCCAATACAGT 59.861 52.381 0.00 0.00 0.00 3.55
1663 2824 0.039764 ACTGGACCTCGACCATGAGA 59.960 55.000 0.00 0.00 38.28 3.27
1688 2858 4.702612 TCTCTCTTTCATCAAGTCGCTACT 59.297 41.667 0.00 0.00 37.65 2.57
1761 2932 3.208594 GGTGGTGTTTTACTCGTTTCCT 58.791 45.455 0.00 0.00 0.00 3.36
1938 3299 6.947644 TTCTTTAAAAGGGTGTGTAGGTTC 57.052 37.500 0.00 0.00 0.00 3.62
1939 3300 5.058490 TCTTTAAAAGGGTGTGTAGGTTCG 58.942 41.667 0.00 0.00 0.00 3.95
1940 3301 4.686191 TTAAAAGGGTGTGTAGGTTCGA 57.314 40.909 0.00 0.00 0.00 3.71
1941 3302 3.782656 AAAAGGGTGTGTAGGTTCGAT 57.217 42.857 0.00 0.00 0.00 3.59
1982 3343 6.428083 TTTTGGGAAAAAGAAGGTTATCCC 57.572 37.500 1.65 1.65 45.50 3.85
1983 3344 4.055710 TGGGAAAAAGAAGGTTATCCCC 57.944 45.455 6.21 0.00 44.83 4.81
1984 3345 3.665618 TGGGAAAAAGAAGGTTATCCCCT 59.334 43.478 6.21 0.00 44.83 4.79
1985 3346 4.023980 GGGAAAAAGAAGGTTATCCCCTG 58.976 47.826 0.00 0.00 40.54 4.45
1986 3347 4.023980 GGAAAAAGAAGGTTATCCCCTGG 58.976 47.826 0.00 0.00 34.19 4.45
1987 3348 2.828661 AAAGAAGGTTATCCCCTGGC 57.171 50.000 0.00 0.00 34.19 4.85
1988 3349 0.927029 AAGAAGGTTATCCCCTGGCC 59.073 55.000 0.00 0.00 34.19 5.36
1989 3350 0.046397 AGAAGGTTATCCCCTGGCCT 59.954 55.000 3.32 0.00 34.19 5.19
1990 3351 0.474614 GAAGGTTATCCCCTGGCCTC 59.525 60.000 3.32 0.00 34.19 4.70
1991 3352 0.046397 AAGGTTATCCCCTGGCCTCT 59.954 55.000 3.32 0.00 34.19 3.69
1992 3353 0.949582 AGGTTATCCCCTGGCCTCTA 59.050 55.000 3.32 0.00 32.11 2.43
1993 3354 1.057471 GGTTATCCCCTGGCCTCTAC 58.943 60.000 3.32 0.00 0.00 2.59
1994 3355 1.694693 GGTTATCCCCTGGCCTCTACA 60.695 57.143 3.32 0.00 0.00 2.74
1995 3356 2.339769 GTTATCCCCTGGCCTCTACAT 58.660 52.381 3.32 0.00 0.00 2.29
1996 3357 2.303311 GTTATCCCCTGGCCTCTACATC 59.697 54.545 3.32 0.00 0.00 3.06
1997 3358 0.570218 ATCCCCTGGCCTCTACATCT 59.430 55.000 3.32 0.00 0.00 2.90
1998 3359 0.399091 TCCCCTGGCCTCTACATCTG 60.399 60.000 3.32 0.00 0.00 2.90
1999 3360 0.399091 CCCCTGGCCTCTACATCTGA 60.399 60.000 3.32 0.00 0.00 3.27
2000 3361 1.500474 CCCTGGCCTCTACATCTGAA 58.500 55.000 3.32 0.00 0.00 3.02
2001 3362 1.139853 CCCTGGCCTCTACATCTGAAC 59.860 57.143 3.32 0.00 0.00 3.18
2002 3363 1.202463 CCTGGCCTCTACATCTGAACG 60.202 57.143 3.32 0.00 0.00 3.95
2003 3364 1.751351 CTGGCCTCTACATCTGAACGA 59.249 52.381 3.32 0.00 0.00 3.85
2004 3365 2.363680 CTGGCCTCTACATCTGAACGAT 59.636 50.000 3.32 0.00 0.00 3.73
2012 3373 2.384899 CATCTGAACGATGCATGCAG 57.615 50.000 26.69 15.79 42.75 4.41
2013 3374 1.669265 CATCTGAACGATGCATGCAGT 59.331 47.619 26.69 16.50 42.75 4.40
2014 3375 1.812235 TCTGAACGATGCATGCAGTT 58.188 45.000 26.69 23.74 0.00 3.16
2015 3376 2.971307 TCTGAACGATGCATGCAGTTA 58.029 42.857 26.69 7.97 0.00 2.24
2016 3377 2.672874 TCTGAACGATGCATGCAGTTAC 59.327 45.455 26.69 17.20 0.00 2.50
2017 3378 2.674852 CTGAACGATGCATGCAGTTACT 59.325 45.455 26.69 8.70 0.00 2.24
2018 3379 3.855858 TGAACGATGCATGCAGTTACTA 58.144 40.909 26.69 11.91 0.00 1.82
2019 3380 3.865164 TGAACGATGCATGCAGTTACTAG 59.135 43.478 26.69 11.42 0.00 2.57
2020 3381 3.526931 ACGATGCATGCAGTTACTAGT 57.473 42.857 26.69 12.09 0.00 2.57
2060 3421 4.395231 AGACGTCTTTTAGGCTATTTTGGC 59.605 41.667 13.58 0.00 0.00 4.52
2061 3422 8.012122 AAGACGTCTTTTAGGCTATTTTGGCC 62.012 42.308 24.93 0.00 40.57 5.36
2090 3453 7.432869 CAAAACATCTTGTAATTTGGGACAGA 58.567 34.615 0.00 0.00 42.39 3.41
2096 3459 4.993705 TGTAATTTGGGACAGAGGAAGT 57.006 40.909 0.00 0.00 42.39 3.01
2174 3541 8.327941 TGAGAAAAATCTCAATCGACTTGAAT 57.672 30.769 6.08 5.97 43.20 2.57
2175 3542 8.446273 TGAGAAAAATCTCAATCGACTTGAATC 58.554 33.333 6.08 4.68 43.20 2.52
2176 3543 8.327941 AGAAAAATCTCAATCGACTTGAATCA 57.672 30.769 10.21 0.00 43.20 2.57
2191 3559 7.481483 CGACTTGAATCAAATTAGCAAAATCGA 59.519 33.333 0.00 0.00 32.98 3.59
2205 3573 7.016361 AGCAAAATCGATACACTTATTCACC 57.984 36.000 0.00 0.00 0.00 4.02
2266 3634 8.472413 ACATTGCTCTTAATTTCTGCACAATAT 58.528 29.630 0.00 0.00 33.13 1.28
2267 3635 9.955208 CATTGCTCTTAATTTCTGCACAATATA 57.045 29.630 0.00 0.00 33.13 0.86
2271 3639 9.766277 GCTCTTAATTTCTGCACAATATATAGC 57.234 33.333 0.00 0.00 0.00 2.97
2281 3663 7.173735 TCTGCACAATATATAGCCACATGAAAG 59.826 37.037 0.00 0.00 0.00 2.62
2309 3691 8.578308 TTGCATCTTTAAATCAGTTTGAGTTG 57.422 30.769 2.38 0.00 35.32 3.16
2346 3728 1.140589 CTAGAGGGTGCAGCGACAG 59.859 63.158 10.24 0.54 0.00 3.51
2484 3866 1.148273 TATGATGGTTGCGGAGGGC 59.852 57.895 0.00 0.00 43.96 5.19
2492 3874 3.179888 TTGCGGAGGGCCACGTAAA 62.180 57.895 18.38 12.24 42.61 2.01
2543 3928 1.890979 GCGGCATGGTGGAGATCAG 60.891 63.158 0.00 0.00 0.00 2.90
2660 4045 8.392612 GCTAAGTGTTTACAAGTGTTGTTCTTA 58.607 33.333 0.00 1.25 42.22 2.10
2681 4066 8.718102 TCTTAAAAGGTAGCACAATCAGTATC 57.282 34.615 0.00 0.00 0.00 2.24
2801 4190 7.116376 TCGTCAACTAATTTGATTGAGTCAGAC 59.884 37.037 0.00 0.00 46.14 3.51
2804 4193 8.724229 TCAACTAATTTGATTGAGTCAGACATG 58.276 33.333 2.66 0.00 39.45 3.21
2824 4213 8.888419 AGACATGACCAAATATCCTAGATTGAT 58.112 33.333 0.00 0.00 0.00 2.57
2844 4233 6.618287 TGATAAGTGTTGTTGTCTTTCAGG 57.382 37.500 0.00 0.00 0.00 3.86
2847 4236 4.701956 AGTGTTGTTGTCTTTCAGGTTG 57.298 40.909 0.00 0.00 0.00 3.77
2850 4239 5.708230 AGTGTTGTTGTCTTTCAGGTTGTAA 59.292 36.000 0.00 0.00 0.00 2.41
2863 4252 5.555966 TCAGGTTGTAACTATGTTCATGCA 58.444 37.500 0.00 0.00 0.00 3.96
2864 4253 6.000840 TCAGGTTGTAACTATGTTCATGCAA 58.999 36.000 0.00 0.00 0.00 4.08
2865 4254 6.149308 TCAGGTTGTAACTATGTTCATGCAAG 59.851 38.462 0.00 0.00 0.00 4.01
2866 4255 5.095490 GGTTGTAACTATGTTCATGCAAGC 58.905 41.667 0.00 0.00 0.00 4.01
2867 4256 5.335583 GGTTGTAACTATGTTCATGCAAGCA 60.336 40.000 0.00 0.00 34.51 3.91
2868 4257 5.550232 TGTAACTATGTTCATGCAAGCAG 57.450 39.130 0.00 0.00 0.00 4.24
2869 4258 3.498927 AACTATGTTCATGCAAGCAGC 57.501 42.857 0.00 0.00 45.96 5.25
2870 4259 1.747355 ACTATGTTCATGCAAGCAGCC 59.253 47.619 0.00 0.00 44.83 4.85
2871 4260 1.746787 CTATGTTCATGCAAGCAGCCA 59.253 47.619 0.00 0.00 44.83 4.75
2872 4261 0.245539 ATGTTCATGCAAGCAGCCAC 59.754 50.000 0.00 0.00 44.83 5.01
2873 4262 1.443194 GTTCATGCAAGCAGCCACG 60.443 57.895 0.00 0.00 44.83 4.94
2874 4263 3.271706 TTCATGCAAGCAGCCACGC 62.272 57.895 0.00 0.00 44.83 5.34
2875 4264 4.789075 CATGCAAGCAGCCACGCC 62.789 66.667 0.00 0.00 44.83 5.68
2879 4268 3.297620 CAAGCAGCCACGCCCTTT 61.298 61.111 0.00 0.00 0.00 3.11
2880 4269 3.297620 AAGCAGCCACGCCCTTTG 61.298 61.111 0.00 0.00 0.00 2.77
2893 4282 4.659172 CTTTGCCCCGCCCAGTCA 62.659 66.667 0.00 0.00 0.00 3.41
2894 4283 4.211330 TTTGCCCCGCCCAGTCAA 62.211 61.111 0.00 0.00 0.00 3.18
2895 4284 3.521765 TTTGCCCCGCCCAGTCAAT 62.522 57.895 0.00 0.00 0.00 2.57
2896 4285 3.521765 TTGCCCCGCCCAGTCAATT 62.522 57.895 0.00 0.00 0.00 2.32
2897 4286 3.451894 GCCCCGCCCAGTCAATTG 61.452 66.667 0.00 0.00 0.00 2.32
2898 4287 3.451894 CCCCGCCCAGTCAATTGC 61.452 66.667 0.00 0.00 0.00 3.56
2899 4288 3.814268 CCCGCCCAGTCAATTGCG 61.814 66.667 0.00 0.00 46.14 4.85
2901 4290 3.055719 CGCCCAGTCAATTGCGGT 61.056 61.111 0.00 0.00 43.08 5.68
2902 4291 2.877691 GCCCAGTCAATTGCGGTC 59.122 61.111 0.00 0.00 0.00 4.79
2903 4292 1.675641 GCCCAGTCAATTGCGGTCT 60.676 57.895 0.00 0.00 0.00 3.85
2904 4293 1.244019 GCCCAGTCAATTGCGGTCTT 61.244 55.000 0.00 0.00 0.00 3.01
2905 4294 0.523072 CCCAGTCAATTGCGGTCTTG 59.477 55.000 0.00 0.00 0.00 3.02
2906 4295 1.238439 CCAGTCAATTGCGGTCTTGT 58.762 50.000 0.00 0.00 0.00 3.16
2907 4296 1.069022 CCAGTCAATTGCGGTCTTGTG 60.069 52.381 0.00 0.00 0.00 3.33
2908 4297 1.603802 CAGTCAATTGCGGTCTTGTGT 59.396 47.619 0.00 0.00 0.00 3.72
2909 4298 2.805671 CAGTCAATTGCGGTCTTGTGTA 59.194 45.455 0.00 0.00 0.00 2.90
2910 4299 3.067106 AGTCAATTGCGGTCTTGTGTAG 58.933 45.455 0.00 0.00 0.00 2.74
2911 4300 3.064207 GTCAATTGCGGTCTTGTGTAGA 58.936 45.455 0.00 0.00 0.00 2.59
2941 4330 5.923733 TTTCCTGCTTTGTAAACTTTCCA 57.076 34.783 0.00 0.00 0.00 3.53
2942 4331 6.478512 TTTCCTGCTTTGTAAACTTTCCAT 57.521 33.333 0.00 0.00 0.00 3.41
2943 4332 5.705609 TCCTGCTTTGTAAACTTTCCATC 57.294 39.130 0.00 0.00 0.00 3.51
2944 4333 5.385198 TCCTGCTTTGTAAACTTTCCATCT 58.615 37.500 0.00 0.00 0.00 2.90
2945 4334 5.833131 TCCTGCTTTGTAAACTTTCCATCTT 59.167 36.000 0.00 0.00 0.00 2.40
2946 4335 6.323739 TCCTGCTTTGTAAACTTTCCATCTTT 59.676 34.615 0.00 0.00 0.00 2.52
2947 4336 6.421801 CCTGCTTTGTAAACTTTCCATCTTTG 59.578 38.462 0.00 0.00 0.00 2.77
2948 4337 7.106439 TGCTTTGTAAACTTTCCATCTTTGA 57.894 32.000 0.00 0.00 0.00 2.69
2949 4338 7.202526 TGCTTTGTAAACTTTCCATCTTTGAG 58.797 34.615 0.00 0.00 0.00 3.02
2950 4339 7.068103 TGCTTTGTAAACTTTCCATCTTTGAGA 59.932 33.333 0.00 0.00 0.00 3.27
2951 4340 8.084684 GCTTTGTAAACTTTCCATCTTTGAGAT 58.915 33.333 0.00 0.00 34.74 2.75
2952 4341 9.617975 CTTTGTAAACTTTCCATCTTTGAGATC 57.382 33.333 0.00 0.00 31.32 2.75
2953 4342 8.924511 TTGTAAACTTTCCATCTTTGAGATCT 57.075 30.769 0.00 0.00 31.32 2.75
2982 4371 9.796120 ATTCTTTGTAACTTTTCATTTTCGACA 57.204 25.926 0.00 0.00 0.00 4.35
2983 4372 8.609478 TCTTTGTAACTTTTCATTTTCGACAC 57.391 30.769 0.00 0.00 0.00 3.67
2984 4373 8.455682 TCTTTGTAACTTTTCATTTTCGACACT 58.544 29.630 0.00 0.00 0.00 3.55
2985 4374 8.973835 TTTGTAACTTTTCATTTTCGACACTT 57.026 26.923 0.00 0.00 0.00 3.16
2986 4375 8.973835 TTGTAACTTTTCATTTTCGACACTTT 57.026 26.923 0.00 0.00 0.00 2.66
2987 4376 8.973835 TGTAACTTTTCATTTTCGACACTTTT 57.026 26.923 0.00 0.00 0.00 2.27
2991 4380 9.849166 AACTTTTCATTTTCGACACTTTTAGAA 57.151 25.926 0.00 0.00 0.00 2.10
2992 4381 9.849166 ACTTTTCATTTTCGACACTTTTAGAAA 57.151 25.926 0.00 0.00 0.00 2.52
2997 4386 9.243637 TCATTTTCGACACTTTTAGAAATTTGG 57.756 29.630 0.00 0.00 33.37 3.28
2998 4387 9.030301 CATTTTCGACACTTTTAGAAATTTGGT 57.970 29.630 0.00 0.00 33.37 3.67
2999 4388 8.989653 TTTTCGACACTTTTAGAAATTTGGTT 57.010 26.923 0.00 0.00 33.37 3.67
3000 4389 8.989653 TTTCGACACTTTTAGAAATTTGGTTT 57.010 26.923 0.00 0.00 0.00 3.27
3001 4390 8.989653 TTCGACACTTTTAGAAATTTGGTTTT 57.010 26.923 0.00 0.00 0.00 2.43
3002 4391 8.401046 TCGACACTTTTAGAAATTTGGTTTTG 57.599 30.769 0.00 0.00 0.00 2.44
3003 4392 8.244802 TCGACACTTTTAGAAATTTGGTTTTGA 58.755 29.630 0.00 0.00 0.00 2.69
3004 4393 8.318167 CGACACTTTTAGAAATTTGGTTTTGAC 58.682 33.333 0.00 0.00 0.00 3.18
3005 4394 8.487313 ACACTTTTAGAAATTTGGTTTTGACC 57.513 30.769 0.00 0.00 0.00 4.02
3006 4395 8.318412 ACACTTTTAGAAATTTGGTTTTGACCT 58.682 29.630 0.00 0.00 0.00 3.85
3007 4396 9.161629 CACTTTTAGAAATTTGGTTTTGACCTT 57.838 29.630 0.00 0.00 0.00 3.50
3008 4397 9.378551 ACTTTTAGAAATTTGGTTTTGACCTTC 57.621 29.630 0.00 0.00 0.00 3.46
3009 4398 9.377312 CTTTTAGAAATTTGGTTTTGACCTTCA 57.623 29.630 0.00 0.00 0.00 3.02
3010 4399 9.726438 TTTTAGAAATTTGGTTTTGACCTTCAA 57.274 25.926 0.00 0.00 34.03 2.69
3011 4400 9.726438 TTTAGAAATTTGGTTTTGACCTTCAAA 57.274 25.926 0.00 0.00 43.84 2.69
3038 4427 6.790232 AAAATCTTGAACCAGTTTTCAGGA 57.210 33.333 0.81 0.81 43.41 3.86
3039 4428 5.774498 AATCTTGAACCAGTTTTCAGGAC 57.226 39.130 0.35 0.00 42.45 3.85
3040 4429 4.503714 TCTTGAACCAGTTTTCAGGACT 57.496 40.909 0.00 0.00 36.85 3.85
3041 4430 4.855340 TCTTGAACCAGTTTTCAGGACTT 58.145 39.130 0.00 0.00 36.85 3.01
3042 4431 5.996644 TCTTGAACCAGTTTTCAGGACTTA 58.003 37.500 0.00 0.00 36.85 2.24
3043 4432 6.055588 TCTTGAACCAGTTTTCAGGACTTAG 58.944 40.000 0.00 0.00 36.85 2.18
3044 4433 5.367945 TGAACCAGTTTTCAGGACTTAGT 57.632 39.130 0.00 0.00 31.68 2.24
3045 4434 5.751586 TGAACCAGTTTTCAGGACTTAGTT 58.248 37.500 0.00 0.00 31.68 2.24
3046 4435 6.184789 TGAACCAGTTTTCAGGACTTAGTTT 58.815 36.000 0.00 0.00 31.68 2.66
3047 4436 6.661805 TGAACCAGTTTTCAGGACTTAGTTTT 59.338 34.615 0.00 0.00 31.68 2.43
3048 4437 6.451064 ACCAGTTTTCAGGACTTAGTTTTG 57.549 37.500 0.00 0.00 0.00 2.44
3049 4438 5.949952 ACCAGTTTTCAGGACTTAGTTTTGT 59.050 36.000 0.00 0.00 0.00 2.83
3050 4439 6.436218 ACCAGTTTTCAGGACTTAGTTTTGTT 59.564 34.615 0.00 0.00 0.00 2.83
3051 4440 6.751888 CCAGTTTTCAGGACTTAGTTTTGTTG 59.248 38.462 0.00 0.00 0.00 3.33
3052 4441 7.362574 CCAGTTTTCAGGACTTAGTTTTGTTGA 60.363 37.037 0.00 0.00 0.00 3.18
3053 4442 8.026607 CAGTTTTCAGGACTTAGTTTTGTTGAA 58.973 33.333 0.00 0.00 0.00 2.69
3054 4443 8.749354 AGTTTTCAGGACTTAGTTTTGTTGAAT 58.251 29.630 0.00 0.00 0.00 2.57
3055 4444 8.807581 GTTTTCAGGACTTAGTTTTGTTGAATG 58.192 33.333 0.00 0.00 0.00 2.67
3056 4445 6.633500 TCAGGACTTAGTTTTGTTGAATGG 57.367 37.500 0.00 0.00 0.00 3.16
3057 4446 6.126409 TCAGGACTTAGTTTTGTTGAATGGT 58.874 36.000 0.00 0.00 0.00 3.55
3058 4447 6.605594 TCAGGACTTAGTTTTGTTGAATGGTT 59.394 34.615 0.00 0.00 0.00 3.67
3059 4448 7.123547 TCAGGACTTAGTTTTGTTGAATGGTTT 59.876 33.333 0.00 0.00 0.00 3.27
3060 4449 8.410141 CAGGACTTAGTTTTGTTGAATGGTTTA 58.590 33.333 0.00 0.00 0.00 2.01
3061 4450 8.410912 AGGACTTAGTTTTGTTGAATGGTTTAC 58.589 33.333 0.00 0.00 0.00 2.01
3062 4451 8.192110 GGACTTAGTTTTGTTGAATGGTTTACA 58.808 33.333 0.00 0.00 0.00 2.41
3063 4452 8.920509 ACTTAGTTTTGTTGAATGGTTTACAC 57.079 30.769 0.00 0.00 0.00 2.90
3064 4453 8.745590 ACTTAGTTTTGTTGAATGGTTTACACT 58.254 29.630 0.00 0.00 0.00 3.55
3065 4454 9.581099 CTTAGTTTTGTTGAATGGTTTACACTT 57.419 29.630 0.00 0.00 0.00 3.16
3066 4455 9.930693 TTAGTTTTGTTGAATGGTTTACACTTT 57.069 25.926 0.00 0.00 0.00 2.66
3067 4456 8.840833 AGTTTTGTTGAATGGTTTACACTTTT 57.159 26.923 0.00 0.00 0.00 2.27
3068 4457 8.716909 AGTTTTGTTGAATGGTTTACACTTTTG 58.283 29.630 0.00 0.00 0.00 2.44
3069 4458 8.713271 GTTTTGTTGAATGGTTTACACTTTTGA 58.287 29.630 0.00 0.00 0.00 2.69
3075 4464 9.495572 TTGAATGGTTTACACTTTTGAAAACTT 57.504 25.926 0.00 0.00 33.40 2.66
3106 4495 8.422973 TCAGAATTCACACTTCCAAAAATTTG 57.577 30.769 8.44 0.00 37.90 2.32
3112 4501 9.883142 ATTCACACTTCCAAAAATTTGAAAGTA 57.117 25.926 9.70 0.00 42.67 2.24
3113 4502 9.883142 TTCACACTTCCAAAAATTTGAAAGTAT 57.117 25.926 9.70 0.00 42.67 2.12
3146 4540 9.642343 AACTCCTAAAATTTTAGAACTTCCACT 57.358 29.630 30.86 9.27 42.05 4.00
3173 4567 3.792047 CGGCCACGTGTGCATGAG 61.792 66.667 24.07 12.29 34.81 2.90
3185 4579 2.593978 CATGAGCCCCACCAGGAG 59.406 66.667 0.00 0.00 38.24 3.69
3196 4590 1.484038 CACCAGGAGGAAGAGGAGAG 58.516 60.000 0.00 0.00 38.69 3.20
3197 4591 1.006519 CACCAGGAGGAAGAGGAGAGA 59.993 57.143 0.00 0.00 38.69 3.10
3205 4599 4.392940 GAGGAAGAGGAGAGATGAGAGAG 58.607 52.174 0.00 0.00 0.00 3.20
3206 4600 4.047166 AGGAAGAGGAGAGATGAGAGAGA 58.953 47.826 0.00 0.00 0.00 3.10
3207 4601 4.478317 AGGAAGAGGAGAGATGAGAGAGAA 59.522 45.833 0.00 0.00 0.00 2.87
3211 4605 2.177669 AGGAGAGATGAGAGAGAAGGGG 59.822 54.545 0.00 0.00 0.00 4.79
3224 4620 2.558359 GAGAAGGGGAAAACATGTGTGG 59.442 50.000 0.00 0.00 0.00 4.17
3271 4862 6.942886 TGTCAACATTGTCACAAAAAGAAC 57.057 33.333 0.00 0.00 0.00 3.01
3274 4865 7.116090 TGTCAACATTGTCACAAAAAGAACAAG 59.884 33.333 0.00 0.00 0.00 3.16
3279 4870 5.828299 TGTCACAAAAAGAACAAGTAGGG 57.172 39.130 0.00 0.00 0.00 3.53
3283 4874 7.558444 TGTCACAAAAAGAACAAGTAGGGTTAT 59.442 33.333 0.00 0.00 0.00 1.89
3286 4877 7.013846 CACAAAAAGAACAAGTAGGGTTATCCA 59.986 37.037 0.00 0.00 38.24 3.41
3287 4878 7.562088 ACAAAAAGAACAAGTAGGGTTATCCAA 59.438 33.333 0.00 0.00 38.24 3.53
3288 4879 7.761038 AAAAGAACAAGTAGGGTTATCCAAG 57.239 36.000 0.00 0.00 38.24 3.61
3289 4880 6.697641 AAGAACAAGTAGGGTTATCCAAGA 57.302 37.500 0.00 0.00 38.24 3.02
3290 4881 6.697641 AGAACAAGTAGGGTTATCCAAGAA 57.302 37.500 0.00 0.00 38.24 2.52
3291 4882 7.086685 AGAACAAGTAGGGTTATCCAAGAAA 57.913 36.000 0.00 0.00 38.24 2.52
3292 4883 6.940867 AGAACAAGTAGGGTTATCCAAGAAAC 59.059 38.462 0.00 0.00 38.24 2.78
3293 4884 6.449830 ACAAGTAGGGTTATCCAAGAAACT 57.550 37.500 0.00 0.00 38.24 2.66
3294 4885 7.563724 ACAAGTAGGGTTATCCAAGAAACTA 57.436 36.000 0.00 0.00 38.24 2.24
3295 4886 7.981142 ACAAGTAGGGTTATCCAAGAAACTAA 58.019 34.615 0.00 0.00 38.24 2.24
3296 4887 8.612145 ACAAGTAGGGTTATCCAAGAAACTAAT 58.388 33.333 0.00 0.00 38.24 1.73
3297 4888 9.462606 CAAGTAGGGTTATCCAAGAAACTAATT 57.537 33.333 0.00 0.00 38.24 1.40
3302 4893 9.421399 AGGGTTATCCAAGAAACTAATTAATGG 57.579 33.333 0.00 0.00 38.24 3.16
3303 4894 9.416284 GGGTTATCCAAGAAACTAATTAATGGA 57.584 33.333 0.00 0.00 39.11 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
521 537 7.951245 ACATTTGGGGTTAGGATAACAACTTAA 59.049 33.333 2.42 0.00 0.00 1.85
572 588 5.164954 GTGTCCTACTCATGAAGACAAGAC 58.835 45.833 15.24 9.84 39.04 3.01
573 589 4.832823 TGTGTCCTACTCATGAAGACAAGA 59.167 41.667 15.24 6.48 39.04 3.02
574 590 5.139435 TGTGTCCTACTCATGAAGACAAG 57.861 43.478 15.24 0.00 39.04 3.16
575 591 5.545063 TTGTGTCCTACTCATGAAGACAA 57.455 39.130 15.24 9.92 39.04 3.18
576 592 5.297547 GTTTGTGTCCTACTCATGAAGACA 58.702 41.667 11.45 11.45 35.20 3.41
577 593 4.691216 GGTTTGTGTCCTACTCATGAAGAC 59.309 45.833 0.00 2.60 0.00 3.01
578 594 4.262894 GGGTTTGTGTCCTACTCATGAAGA 60.263 45.833 0.00 0.00 0.00 2.87
579 595 4.003648 GGGTTTGTGTCCTACTCATGAAG 58.996 47.826 0.00 0.00 0.00 3.02
580 596 3.650942 AGGGTTTGTGTCCTACTCATGAA 59.349 43.478 0.00 0.00 0.00 2.57
581 597 3.248024 AGGGTTTGTGTCCTACTCATGA 58.752 45.455 0.00 0.00 0.00 3.07
582 598 3.703001 AGGGTTTGTGTCCTACTCATG 57.297 47.619 0.00 0.00 0.00 3.07
583 599 4.595781 TGTTAGGGTTTGTGTCCTACTCAT 59.404 41.667 0.00 0.00 35.56 2.90
584 600 3.968649 TGTTAGGGTTTGTGTCCTACTCA 59.031 43.478 0.00 0.00 35.56 3.41
585 601 4.612264 TGTTAGGGTTTGTGTCCTACTC 57.388 45.455 0.00 0.00 35.56 2.59
586 602 5.376756 TTTGTTAGGGTTTGTGTCCTACT 57.623 39.130 0.00 0.00 35.56 2.57
587 603 6.002082 AGATTTGTTAGGGTTTGTGTCCTAC 58.998 40.000 0.00 0.00 35.56 3.18
588 604 6.195600 AGATTTGTTAGGGTTTGTGTCCTA 57.804 37.500 0.00 0.00 34.75 2.94
589 605 5.061721 AGATTTGTTAGGGTTTGTGTCCT 57.938 39.130 0.00 0.00 37.18 3.85
590 606 4.083484 CGAGATTTGTTAGGGTTTGTGTCC 60.083 45.833 0.00 0.00 0.00 4.02
591 607 4.753107 TCGAGATTTGTTAGGGTTTGTGTC 59.247 41.667 0.00 0.00 0.00 3.67
592 608 4.710324 TCGAGATTTGTTAGGGTTTGTGT 58.290 39.130 0.00 0.00 0.00 3.72
593 609 5.468746 TCTTCGAGATTTGTTAGGGTTTGTG 59.531 40.000 0.00 0.00 0.00 3.33
594 610 5.469084 GTCTTCGAGATTTGTTAGGGTTTGT 59.531 40.000 0.00 0.00 0.00 2.83
595 611 5.468746 TGTCTTCGAGATTTGTTAGGGTTTG 59.531 40.000 0.00 0.00 0.00 2.93
596 612 5.469084 GTGTCTTCGAGATTTGTTAGGGTTT 59.531 40.000 0.00 0.00 0.00 3.27
597 613 4.995487 GTGTCTTCGAGATTTGTTAGGGTT 59.005 41.667 0.00 0.00 0.00 4.11
598 614 4.566987 GTGTCTTCGAGATTTGTTAGGGT 58.433 43.478 0.00 0.00 0.00 4.34
599 615 3.612860 CGTGTCTTCGAGATTTGTTAGGG 59.387 47.826 0.00 0.00 0.00 3.53
600 616 4.235360 ACGTGTCTTCGAGATTTGTTAGG 58.765 43.478 0.00 0.00 34.70 2.69
601 617 5.154932 AGACGTGTCTTCGAGATTTGTTAG 58.845 41.667 0.00 0.00 36.31 2.34
602 618 5.117355 AGACGTGTCTTCGAGATTTGTTA 57.883 39.130 0.00 0.00 36.31 2.41
603 619 3.978687 AGACGTGTCTTCGAGATTTGTT 58.021 40.909 0.00 0.00 36.31 2.83
604 620 3.644884 AGACGTGTCTTCGAGATTTGT 57.355 42.857 0.00 0.00 36.31 2.83
605 621 6.448053 TTTTAGACGTGTCTTCGAGATTTG 57.552 37.500 7.97 0.00 40.93 2.32
606 622 7.360101 CCATTTTTAGACGTGTCTTCGAGATTT 60.360 37.037 7.97 0.00 40.93 2.17
607 623 6.090898 CCATTTTTAGACGTGTCTTCGAGATT 59.909 38.462 7.97 0.00 40.93 2.40
608 624 5.577164 CCATTTTTAGACGTGTCTTCGAGAT 59.423 40.000 7.97 0.00 40.93 2.75
609 625 4.921515 CCATTTTTAGACGTGTCTTCGAGA 59.078 41.667 7.97 0.00 40.93 4.04
610 626 4.921515 TCCATTTTTAGACGTGTCTTCGAG 59.078 41.667 7.97 0.00 40.93 4.04
611 627 4.873817 TCCATTTTTAGACGTGTCTTCGA 58.126 39.130 7.97 0.00 40.93 3.71
612 628 5.220416 GGATCCATTTTTAGACGTGTCTTCG 60.220 44.000 6.95 0.00 40.93 3.79
613 629 5.064834 GGGATCCATTTTTAGACGTGTCTTC 59.935 44.000 15.23 0.00 40.93 2.87
614 630 4.941873 GGGATCCATTTTTAGACGTGTCTT 59.058 41.667 15.23 0.00 40.93 3.01
615 631 4.225267 AGGGATCCATTTTTAGACGTGTCT 59.775 41.667 15.23 7.77 43.40 3.41
616 632 4.514401 AGGGATCCATTTTTAGACGTGTC 58.486 43.478 15.23 0.00 0.00 3.67
617 633 4.514401 GAGGGATCCATTTTTAGACGTGT 58.486 43.478 15.23 0.00 0.00 4.49
618 634 3.877508 GGAGGGATCCATTTTTAGACGTG 59.122 47.826 15.23 0.00 0.00 4.49
619 635 3.118000 GGGAGGGATCCATTTTTAGACGT 60.118 47.826 15.23 0.00 0.00 4.34
620 636 3.118038 TGGGAGGGATCCATTTTTAGACG 60.118 47.826 15.23 0.00 0.00 4.18
621 637 4.207955 GTGGGAGGGATCCATTTTTAGAC 58.792 47.826 15.23 0.00 36.58 2.59
622 638 3.204382 GGTGGGAGGGATCCATTTTTAGA 59.796 47.826 15.23 0.00 36.58 2.10
623 639 3.566351 GGTGGGAGGGATCCATTTTTAG 58.434 50.000 15.23 0.00 36.58 1.85
624 640 2.092103 CGGTGGGAGGGATCCATTTTTA 60.092 50.000 15.23 0.00 36.58 1.52
625 641 1.341976 CGGTGGGAGGGATCCATTTTT 60.342 52.381 15.23 0.00 36.58 1.94
626 642 0.258774 CGGTGGGAGGGATCCATTTT 59.741 55.000 15.23 0.00 36.58 1.82
627 643 1.645402 CCGGTGGGAGGGATCCATTT 61.645 60.000 15.23 0.00 36.58 2.32
628 644 2.078665 CCGGTGGGAGGGATCCATT 61.079 63.158 15.23 0.00 36.58 3.16
629 645 2.448542 CCGGTGGGAGGGATCCAT 60.449 66.667 15.23 6.26 36.58 3.41
632 648 3.406595 CTTGCCGGTGGGAGGGATC 62.407 68.421 1.90 0.00 34.06 3.36
633 649 3.411517 CTTGCCGGTGGGAGGGAT 61.412 66.667 1.90 0.00 34.06 3.85
646 662 4.162690 ACGGATCTCGGCCCTTGC 62.163 66.667 0.00 0.00 44.45 4.01
647 663 2.107141 GACGGATCTCGGCCCTTG 59.893 66.667 0.00 0.00 42.09 3.61
648 664 3.528370 CGACGGATCTCGGCCCTT 61.528 66.667 0.00 0.00 45.97 3.95
649 665 4.816984 ACGACGGATCTCGGCCCT 62.817 66.667 8.95 0.00 45.97 5.19
650 666 4.570663 CACGACGGATCTCGGCCC 62.571 72.222 8.95 0.00 45.97 5.80
653 669 4.570663 GGGCACGACGGATCTCGG 62.571 72.222 8.95 0.38 44.45 4.63
654 670 1.792118 TATGGGCACGACGGATCTCG 61.792 60.000 0.00 3.04 45.88 4.04
655 671 0.387929 TTATGGGCACGACGGATCTC 59.612 55.000 0.00 0.00 0.00 2.75
656 672 0.104304 GTTATGGGCACGACGGATCT 59.896 55.000 0.00 0.00 0.00 2.75
657 673 0.878961 GGTTATGGGCACGACGGATC 60.879 60.000 0.00 0.00 0.00 3.36
658 674 1.145377 GGTTATGGGCACGACGGAT 59.855 57.895 0.00 0.00 0.00 4.18
659 675 2.580276 GGTTATGGGCACGACGGA 59.420 61.111 0.00 0.00 0.00 4.69
660 676 1.678598 TAGGGTTATGGGCACGACGG 61.679 60.000 0.00 0.00 0.00 4.79
661 677 0.176219 TTAGGGTTATGGGCACGACG 59.824 55.000 0.00 0.00 0.00 5.12
662 678 1.474498 CCTTAGGGTTATGGGCACGAC 60.474 57.143 0.00 0.00 0.00 4.34
663 679 0.834612 CCTTAGGGTTATGGGCACGA 59.165 55.000 0.00 0.00 0.00 4.35
664 680 0.818040 GCCTTAGGGTTATGGGCACG 60.818 60.000 0.00 0.00 42.08 5.34
665 681 0.467474 GGCCTTAGGGTTATGGGCAC 60.467 60.000 0.00 0.00 44.44 5.01
666 682 1.927428 GGCCTTAGGGTTATGGGCA 59.073 57.895 0.00 0.00 44.44 5.36
667 683 0.467474 GTGGCCTTAGGGTTATGGGC 60.467 60.000 3.32 0.00 44.95 5.36
668 684 0.185175 GGTGGCCTTAGGGTTATGGG 59.815 60.000 3.32 0.00 34.45 4.00
669 685 0.923358 TGGTGGCCTTAGGGTTATGG 59.077 55.000 3.32 0.00 34.45 2.74
670 686 2.818751 TTGGTGGCCTTAGGGTTATG 57.181 50.000 3.32 0.00 34.45 1.90
671 687 2.923629 TCTTTGGTGGCCTTAGGGTTAT 59.076 45.455 3.32 0.00 34.45 1.89
672 688 2.040679 GTCTTTGGTGGCCTTAGGGTTA 59.959 50.000 3.32 0.00 34.45 2.85
673 689 1.154430 TCTTTGGTGGCCTTAGGGTT 58.846 50.000 3.32 0.00 34.45 4.11
674 690 0.404426 GTCTTTGGTGGCCTTAGGGT 59.596 55.000 3.32 0.00 34.45 4.34
675 691 0.676782 CGTCTTTGGTGGCCTTAGGG 60.677 60.000 3.32 0.00 0.00 3.53
676 692 0.323629 TCGTCTTTGGTGGCCTTAGG 59.676 55.000 3.32 0.00 0.00 2.69
677 693 1.676014 CCTCGTCTTTGGTGGCCTTAG 60.676 57.143 3.32 0.00 0.00 2.18
678 694 0.323629 CCTCGTCTTTGGTGGCCTTA 59.676 55.000 3.32 0.00 0.00 2.69
679 695 1.073199 CCTCGTCTTTGGTGGCCTT 59.927 57.895 3.32 0.00 0.00 4.35
680 696 2.147387 ACCTCGTCTTTGGTGGCCT 61.147 57.895 3.32 0.00 34.90 5.19
681 697 2.430367 ACCTCGTCTTTGGTGGCC 59.570 61.111 0.00 0.00 34.90 5.36
685 701 0.246635 CGATCCACCTCGTCTTTGGT 59.753 55.000 0.00 0.00 36.96 3.67
686 702 0.530744 TCGATCCACCTCGTCTTTGG 59.469 55.000 0.00 0.00 39.62 3.28
687 703 1.630148 GTCGATCCACCTCGTCTTTG 58.370 55.000 0.00 0.00 39.62 2.77
688 704 0.170561 CGTCGATCCACCTCGTCTTT 59.829 55.000 0.00 0.00 39.62 2.52
689 705 1.801332 CGTCGATCCACCTCGTCTT 59.199 57.895 0.00 0.00 39.62 3.01
690 706 2.762234 GCGTCGATCCACCTCGTCT 61.762 63.158 0.00 0.00 39.62 4.18
691 707 2.278013 GCGTCGATCCACCTCGTC 60.278 66.667 0.00 0.00 39.62 4.20
692 708 3.823330 GGCGTCGATCCACCTCGT 61.823 66.667 0.00 0.00 39.62 4.18
693 709 3.758088 CTGGCGTCGATCCACCTCG 62.758 68.421 5.39 0.00 39.99 4.63
694 710 2.105128 CTGGCGTCGATCCACCTC 59.895 66.667 5.39 0.00 0.00 3.85
695 711 4.148825 GCTGGCGTCGATCCACCT 62.149 66.667 5.39 0.00 0.00 4.00
696 712 4.451150 TGCTGGCGTCGATCCACC 62.451 66.667 5.39 1.09 0.00 4.61
697 713 3.188786 GTGCTGGCGTCGATCCAC 61.189 66.667 5.39 4.50 0.00 4.02
698 714 4.451150 GGTGCTGGCGTCGATCCA 62.451 66.667 8.75 8.75 0.00 3.41
712 728 4.263572 TTGTGCCTCCCACCGGTG 62.264 66.667 28.26 28.26 44.01 4.94
713 729 3.953775 CTTGTGCCTCCCACCGGT 61.954 66.667 0.00 0.00 44.01 5.28
714 730 3.190738 TTCTTGTGCCTCCCACCGG 62.191 63.158 0.00 0.00 44.01 5.28
715 731 1.966451 GTTCTTGTGCCTCCCACCG 60.966 63.158 0.00 0.00 44.01 4.94
716 732 1.603739 GGTTCTTGTGCCTCCCACC 60.604 63.158 0.00 0.00 44.01 4.61
717 733 1.603739 GGGTTCTTGTGCCTCCCAC 60.604 63.158 0.00 0.00 44.90 4.61
718 734 0.474854 TAGGGTTCTTGTGCCTCCCA 60.475 55.000 0.00 0.00 40.48 4.37
719 735 0.696501 TTAGGGTTCTTGTGCCTCCC 59.303 55.000 0.00 0.00 38.50 4.30
720 736 2.755103 CAATTAGGGTTCTTGTGCCTCC 59.245 50.000 0.00 0.00 0.00 4.30
721 737 2.755103 CCAATTAGGGTTCTTGTGCCTC 59.245 50.000 0.00 0.00 0.00 4.70
722 738 2.807676 CCAATTAGGGTTCTTGTGCCT 58.192 47.619 0.00 0.00 0.00 4.75
734 750 1.451936 CGCCTCCTCCCCAATTAGG 59.548 63.158 0.00 0.00 37.03 2.69
735 751 1.451936 CCGCCTCCTCCCCAATTAG 59.548 63.158 0.00 0.00 0.00 1.73
736 752 2.752807 GCCGCCTCCTCCCCAATTA 61.753 63.158 0.00 0.00 0.00 1.40
737 753 4.129148 GCCGCCTCCTCCCCAATT 62.129 66.667 0.00 0.00 0.00 2.32
758 774 0.526662 CCAGGTACGTGACTCCTCAC 59.473 60.000 16.93 0.00 43.17 3.51
765 781 0.669625 GCCAAGTCCAGGTACGTGAC 60.670 60.000 16.93 12.23 34.73 3.67
774 790 1.639298 GCTAACAGCGCCAAGTCCAG 61.639 60.000 2.29 3.33 0.00 3.86
776 792 1.671054 TGCTAACAGCGCCAAGTCC 60.671 57.895 2.29 0.00 46.26 3.85
778 794 3.655481 GTGCTAACAGCGCCAAGT 58.345 55.556 2.29 0.00 46.26 3.16
784 801 3.515071 AAAACTAACGTGCTAACAGCG 57.485 42.857 0.00 0.00 46.26 5.18
812 829 7.317842 TCGTGTACTTGGTTTTCATGTTTTA 57.682 32.000 0.00 0.00 35.66 1.52
821 838 2.803956 CGTCCATCGTGTACTTGGTTTT 59.196 45.455 0.00 0.00 34.52 2.43
827 844 0.529378 GGTCCGTCCATCGTGTACTT 59.471 55.000 0.00 0.00 37.94 2.24
830 847 1.000521 AGGGTCCGTCCATCGTGTA 60.001 57.895 0.00 0.00 38.11 2.90
862 879 1.142870 AGTTGCCAAGCACAGACCTAA 59.857 47.619 0.00 0.00 38.71 2.69
863 880 0.764890 AGTTGCCAAGCACAGACCTA 59.235 50.000 0.00 0.00 38.71 3.08
871 888 0.251297 AGTGCCATAGTTGCCAAGCA 60.251 50.000 0.00 0.00 36.47 3.91
904 921 5.302059 GGAGTGCTAGGGTTTTTCTTTTCTT 59.698 40.000 0.00 0.00 0.00 2.52
945 962 2.069273 CTGTTATGATTCCGCCGATCC 58.931 52.381 0.00 0.00 0.00 3.36
949 966 0.813610 TGGCTGTTATGATTCCGCCG 60.814 55.000 0.00 0.00 40.31 6.46
950 967 1.388547 TTGGCTGTTATGATTCCGCC 58.611 50.000 0.00 0.00 38.01 6.13
951 968 3.632189 GAATTGGCTGTTATGATTCCGC 58.368 45.455 0.00 0.00 0.00 5.54
1028 1050 2.124403 GGAGCCACAGCAGGATGG 60.124 66.667 0.00 0.00 43.56 3.51
1085 1107 1.515519 TCTACAACGTCGCGCCATC 60.516 57.895 0.00 0.00 0.00 3.51
1098 1120 2.427905 GTCGTGCGCGTGTCTACA 60.428 61.111 20.50 0.00 39.49 2.74
1195 1224 4.141711 GCCATTCCACAGAACTCTATGGTA 60.142 45.833 4.01 0.00 41.24 3.25
1196 1225 3.370953 GCCATTCCACAGAACTCTATGGT 60.371 47.826 4.01 0.00 41.24 3.55
1206 1235 1.770658 CTAGGGATGCCATTCCACAGA 59.229 52.381 4.44 0.00 37.53 3.41
1367 1399 1.692749 GGGGAGCCAGTGGTGGATA 60.693 63.158 11.74 0.00 44.84 2.59
1386 1418 1.152819 TACGATGTAGCCGCTCCCT 60.153 57.895 0.00 0.00 0.00 4.20
1388 1420 1.286260 CCTACGATGTAGCCGCTCC 59.714 63.158 0.00 0.00 0.00 4.70
1418 1453 0.828677 GTGGTACCCGAAGCCATACT 59.171 55.000 10.07 0.00 34.52 2.12
1518 2678 0.838554 TCCATGACGACTCCCCCAAA 60.839 55.000 0.00 0.00 0.00 3.28
1663 2824 3.509575 AGCGACTTGATGAAAGAGAGACT 59.490 43.478 0.00 0.00 39.38 3.24
1688 2858 0.955428 GCTTCCAGGCGACACATCAA 60.955 55.000 0.00 0.00 0.00 2.57
1761 2932 4.014406 ACGTACATACCTCACACTGATGA 58.986 43.478 0.00 0.00 0.00 2.92
1833 3020 7.389330 TGAACAAACTGAGACTTAAGTGAACAA 59.611 33.333 14.14 0.00 0.00 2.83
1838 3025 6.662414 TGTGAACAAACTGAGACTTAAGTG 57.338 37.500 14.14 0.54 0.00 3.16
1868 3055 5.147162 CGCTTCTCGCTGAACTAAAATTTT 58.853 37.500 8.75 8.75 36.13 1.82
1958 3319 6.183361 GGGGATAACCTTCTTTTTCCCAAAAA 60.183 38.462 11.89 0.00 43.84 1.94
1959 3320 5.308497 GGGGATAACCTTCTTTTTCCCAAAA 59.692 40.000 11.89 0.00 43.84 2.44
1960 3321 4.841813 GGGGATAACCTTCTTTTTCCCAAA 59.158 41.667 11.89 0.00 43.84 3.28
1961 3322 4.108942 AGGGGATAACCTTCTTTTTCCCAA 59.891 41.667 11.89 0.00 43.84 4.12
1962 3323 3.665618 AGGGGATAACCTTCTTTTTCCCA 59.334 43.478 11.89 0.00 43.84 4.37
1963 3324 4.023980 CAGGGGATAACCTTCTTTTTCCC 58.976 47.826 3.47 3.47 39.34 3.97
1964 3325 4.023980 CCAGGGGATAACCTTCTTTTTCC 58.976 47.826 0.00 0.00 39.34 3.13
1965 3326 3.447586 GCCAGGGGATAACCTTCTTTTTC 59.552 47.826 0.00 0.00 39.34 2.29
1966 3327 3.441101 GCCAGGGGATAACCTTCTTTTT 58.559 45.455 0.00 0.00 39.34 1.94
1967 3328 2.292257 GGCCAGGGGATAACCTTCTTTT 60.292 50.000 0.00 0.00 39.34 2.27
1968 3329 1.288037 GGCCAGGGGATAACCTTCTTT 59.712 52.381 0.00 0.00 39.34 2.52
1969 3330 0.927029 GGCCAGGGGATAACCTTCTT 59.073 55.000 0.00 0.00 39.34 2.52
1970 3331 0.046397 AGGCCAGGGGATAACCTTCT 59.954 55.000 5.01 0.00 39.34 2.85
1971 3332 0.474614 GAGGCCAGGGGATAACCTTC 59.525 60.000 5.01 0.00 39.34 3.46
1972 3333 0.046397 AGAGGCCAGGGGATAACCTT 59.954 55.000 5.01 0.00 39.34 3.50
1973 3334 0.949582 TAGAGGCCAGGGGATAACCT 59.050 55.000 5.01 0.00 43.08 3.50
1974 3335 1.057471 GTAGAGGCCAGGGGATAACC 58.943 60.000 5.01 0.00 39.11 2.85
1975 3336 1.802553 TGTAGAGGCCAGGGGATAAC 58.197 55.000 5.01 0.00 0.00 1.89
1976 3337 2.182312 AGATGTAGAGGCCAGGGGATAA 59.818 50.000 5.01 0.00 0.00 1.75
1977 3338 1.795786 AGATGTAGAGGCCAGGGGATA 59.204 52.381 5.01 0.00 0.00 2.59
1978 3339 0.570218 AGATGTAGAGGCCAGGGGAT 59.430 55.000 5.01 0.00 0.00 3.85
1979 3340 0.399091 CAGATGTAGAGGCCAGGGGA 60.399 60.000 5.01 0.00 0.00 4.81
1980 3341 0.399091 TCAGATGTAGAGGCCAGGGG 60.399 60.000 5.01 0.00 0.00 4.79
1981 3342 1.139853 GTTCAGATGTAGAGGCCAGGG 59.860 57.143 5.01 0.00 0.00 4.45
1982 3343 1.202463 CGTTCAGATGTAGAGGCCAGG 60.202 57.143 5.01 0.00 0.00 4.45
1983 3344 1.751351 TCGTTCAGATGTAGAGGCCAG 59.249 52.381 5.01 0.00 0.00 4.85
1984 3345 1.847328 TCGTTCAGATGTAGAGGCCA 58.153 50.000 5.01 0.00 0.00 5.36
1994 3355 2.034104 ACTGCATGCATCGTTCAGAT 57.966 45.000 22.97 0.00 41.01 2.90
1995 3356 1.812235 AACTGCATGCATCGTTCAGA 58.188 45.000 22.97 0.00 0.00 3.27
1996 3357 2.674852 AGTAACTGCATGCATCGTTCAG 59.325 45.455 23.84 12.87 0.00 3.02
1997 3358 2.698803 AGTAACTGCATGCATCGTTCA 58.301 42.857 23.84 11.34 0.00 3.18
1998 3359 3.865745 ACTAGTAACTGCATGCATCGTTC 59.134 43.478 23.84 16.60 0.00 3.95
1999 3360 3.861840 ACTAGTAACTGCATGCATCGTT 58.138 40.909 22.97 23.42 0.00 3.85
2000 3361 3.526931 ACTAGTAACTGCATGCATCGT 57.473 42.857 22.97 14.15 0.00 3.73
2001 3362 3.246226 GGAACTAGTAACTGCATGCATCG 59.754 47.826 22.97 13.40 0.00 3.84
2002 3363 4.191544 TGGAACTAGTAACTGCATGCATC 58.808 43.478 22.97 12.13 0.00 3.91
2003 3364 4.220693 TGGAACTAGTAACTGCATGCAT 57.779 40.909 22.97 10.26 0.00 3.96
2004 3365 3.694043 TGGAACTAGTAACTGCATGCA 57.306 42.857 21.29 21.29 0.00 3.96
2005 3366 3.561725 GGATGGAACTAGTAACTGCATGC 59.438 47.826 11.82 11.82 0.00 4.06
2006 3367 4.130118 GGGATGGAACTAGTAACTGCATG 58.870 47.826 4.93 0.00 0.00 4.06
2007 3368 3.780294 TGGGATGGAACTAGTAACTGCAT 59.220 43.478 0.00 0.00 0.00 3.96
2008 3369 3.178046 TGGGATGGAACTAGTAACTGCA 58.822 45.455 0.00 0.00 0.00 4.41
2009 3370 3.906720 TGGGATGGAACTAGTAACTGC 57.093 47.619 0.00 0.00 0.00 4.40
2010 3371 8.980481 ATAATTTGGGATGGAACTAGTAACTG 57.020 34.615 0.00 0.00 0.00 3.16
2015 3376 7.931948 CGTCTTATAATTTGGGATGGAACTAGT 59.068 37.037 0.00 0.00 0.00 2.57
2016 3377 7.931948 ACGTCTTATAATTTGGGATGGAACTAG 59.068 37.037 0.00 0.00 0.00 2.57
2017 3378 7.798071 ACGTCTTATAATTTGGGATGGAACTA 58.202 34.615 0.00 0.00 0.00 2.24
2018 3379 6.659824 ACGTCTTATAATTTGGGATGGAACT 58.340 36.000 0.00 0.00 0.00 3.01
2019 3380 6.766467 AGACGTCTTATAATTTGGGATGGAAC 59.234 38.462 13.58 0.00 0.00 3.62
2020 3381 6.895782 AGACGTCTTATAATTTGGGATGGAA 58.104 36.000 13.58 0.00 0.00 3.53
2058 3419 5.914898 ATTACAAGATGTTTTGGTAGGCC 57.085 39.130 0.00 0.00 32.32 5.19
2060 3421 7.039363 TCCCAAATTACAAGATGTTTTGGTAGG 60.039 37.037 18.36 9.01 42.44 3.18
2061 3422 7.812669 GTCCCAAATTACAAGATGTTTTGGTAG 59.187 37.037 18.36 9.48 42.44 3.18
2063 3424 6.098982 TGTCCCAAATTACAAGATGTTTTGGT 59.901 34.615 18.36 0.00 42.44 3.67
2076 3439 9.628500 AATATTACTTCCTCTGTCCCAAATTAC 57.372 33.333 0.00 0.00 0.00 1.89
2191 3559 9.515226 AACAATTACACAGGTGAATAAGTGTAT 57.485 29.630 12.90 5.21 44.19 2.29
2205 3573 6.055231 TCTGTCGGAAAAACAATTACACAG 57.945 37.500 0.00 0.00 0.00 3.66
2236 3604 6.252869 GTGCAGAAATTAAGAGCAATGTCATG 59.747 38.462 0.00 0.00 36.91 3.07
2266 3634 7.226441 AGATGCAATACTTTCATGTGGCTATA 58.774 34.615 0.00 0.00 0.00 1.31
2267 3635 6.066690 AGATGCAATACTTTCATGTGGCTAT 58.933 36.000 0.00 0.00 0.00 2.97
2268 3636 5.439721 AGATGCAATACTTTCATGTGGCTA 58.560 37.500 0.00 0.00 0.00 3.93
2270 3638 4.644103 AGATGCAATACTTTCATGTGGC 57.356 40.909 0.00 0.00 0.00 5.01
2271 3639 8.984891 TTTAAAGATGCAATACTTTCATGTGG 57.015 30.769 16.20 0.00 37.49 4.17
2281 3663 9.846248 ACTCAAACTGATTTAAAGATGCAATAC 57.154 29.630 0.00 0.00 0.00 1.89
2309 3691 0.244721 GAACCCAAACCTGCAGATGC 59.755 55.000 17.39 0.00 42.50 3.91
2346 3728 2.072298 GCTCCATGTGTGTTCTCTCAC 58.928 52.381 0.00 0.00 38.20 3.51
2400 3782 4.154347 GAGCTGCCAGGTCCTCGG 62.154 72.222 12.87 0.00 36.78 4.63
2467 3849 2.124151 GCCCTCCGCAACCATCAT 60.124 61.111 0.00 0.00 37.47 2.45
2543 3928 1.212229 GTTCCCGGACTCGTCTCAC 59.788 63.158 0.73 0.00 33.95 3.51
2660 4045 5.488341 ACGATACTGATTGTGCTACCTTTT 58.512 37.500 0.00 0.00 0.00 2.27
2681 4066 3.002451 TGACAAAAACCGTATGTGGAACG 59.998 43.478 0.00 0.00 42.39 3.95
2751 4137 2.755103 AGAATCCTCAAAAATGGGCGAC 59.245 45.455 0.00 0.00 0.00 5.19
2781 4167 8.261492 GTCATGTCTGACTCAATCAAATTAGT 57.739 34.615 9.51 0.00 46.84 2.24
2814 4203 8.553459 AAGACAACAACACTTATCAATCTAGG 57.447 34.615 0.00 0.00 0.00 3.02
2824 4213 5.708230 ACAACCTGAAAGACAACAACACTTA 59.292 36.000 0.00 0.00 34.07 2.24
2844 4233 5.698832 TGCTTGCATGAACATAGTTACAAC 58.301 37.500 3.33 0.00 0.00 3.32
2847 4236 4.346129 GCTGCTTGCATGAACATAGTTAC 58.654 43.478 3.33 0.00 42.31 2.50
2850 4239 1.747355 GGCTGCTTGCATGAACATAGT 59.253 47.619 3.33 0.00 45.15 2.12
2863 4252 3.297620 CAAAGGGCGTGGCTGCTT 61.298 61.111 0.00 0.00 34.52 3.91
2876 4265 4.659172 TGACTGGGCGGGGCAAAG 62.659 66.667 0.00 0.00 0.00 2.77
2877 4266 3.521765 ATTGACTGGGCGGGGCAAA 62.522 57.895 0.98 0.00 0.00 3.68
2878 4267 3.521765 AATTGACTGGGCGGGGCAA 62.522 57.895 0.00 0.00 0.00 4.52
2879 4268 3.978193 AATTGACTGGGCGGGGCA 61.978 61.111 0.00 0.00 0.00 5.36
2880 4269 3.451894 CAATTGACTGGGCGGGGC 61.452 66.667 0.00 0.00 0.00 5.80
2881 4270 3.451894 GCAATTGACTGGGCGGGG 61.452 66.667 10.34 0.00 0.00 5.73
2882 4271 3.814268 CGCAATTGACTGGGCGGG 61.814 66.667 10.34 0.00 45.27 6.13
2885 4274 1.244019 AAGACCGCAATTGACTGGGC 61.244 55.000 10.34 9.58 0.00 5.36
2886 4275 0.523072 CAAGACCGCAATTGACTGGG 59.477 55.000 10.34 6.67 0.00 4.45
2887 4276 1.069022 CACAAGACCGCAATTGACTGG 60.069 52.381 10.34 9.82 0.00 4.00
2888 4277 1.603802 ACACAAGACCGCAATTGACTG 59.396 47.619 10.34 0.00 0.00 3.51
2889 4278 1.967319 ACACAAGACCGCAATTGACT 58.033 45.000 10.34 0.00 0.00 3.41
2890 4279 3.064207 TCTACACAAGACCGCAATTGAC 58.936 45.455 10.34 0.00 0.00 3.18
2891 4280 3.394674 TCTACACAAGACCGCAATTGA 57.605 42.857 10.34 0.00 0.00 2.57
2917 4306 6.702329 TGGAAAGTTTACAAAGCAGGAAAAA 58.298 32.000 0.00 0.00 0.00 1.94
2918 4307 6.287589 TGGAAAGTTTACAAAGCAGGAAAA 57.712 33.333 0.00 0.00 0.00 2.29
2919 4308 5.923733 TGGAAAGTTTACAAAGCAGGAAA 57.076 34.783 0.00 0.00 0.00 3.13
2920 4309 5.833131 AGATGGAAAGTTTACAAAGCAGGAA 59.167 36.000 4.21 0.00 0.00 3.36
2921 4310 5.385198 AGATGGAAAGTTTACAAAGCAGGA 58.615 37.500 4.21 0.00 0.00 3.86
2922 4311 5.712152 AGATGGAAAGTTTACAAAGCAGG 57.288 39.130 4.21 0.00 0.00 4.85
2923 4312 7.202526 TCAAAGATGGAAAGTTTACAAAGCAG 58.797 34.615 4.21 0.00 0.00 4.24
2924 4313 7.068103 TCTCAAAGATGGAAAGTTTACAAAGCA 59.932 33.333 4.21 0.00 0.00 3.91
2925 4314 7.425606 TCTCAAAGATGGAAAGTTTACAAAGC 58.574 34.615 4.21 0.00 0.00 3.51
2926 4315 9.617975 GATCTCAAAGATGGAAAGTTTACAAAG 57.382 33.333 4.21 0.00 34.53 2.77
2927 4316 9.354673 AGATCTCAAAGATGGAAAGTTTACAAA 57.645 29.630 4.21 0.00 34.53 2.83
2928 4317 8.924511 AGATCTCAAAGATGGAAAGTTTACAA 57.075 30.769 4.21 0.00 34.53 2.41
2956 4345 9.796120 TGTCGAAAATGAAAAGTTACAAAGAAT 57.204 25.926 0.00 0.00 0.00 2.40
2957 4346 9.068008 GTGTCGAAAATGAAAAGTTACAAAGAA 57.932 29.630 0.00 0.00 0.00 2.52
2958 4347 8.455682 AGTGTCGAAAATGAAAAGTTACAAAGA 58.544 29.630 0.00 0.00 0.00 2.52
2959 4348 8.614994 AGTGTCGAAAATGAAAAGTTACAAAG 57.385 30.769 0.00 0.00 0.00 2.77
2960 4349 8.973835 AAGTGTCGAAAATGAAAAGTTACAAA 57.026 26.923 0.00 0.00 0.00 2.83
2961 4350 8.973835 AAAGTGTCGAAAATGAAAAGTTACAA 57.026 26.923 0.00 0.00 0.00 2.41
2962 4351 8.973835 AAAAGTGTCGAAAATGAAAAGTTACA 57.026 26.923 0.00 0.00 0.00 2.41
2965 4354 9.849166 TTCTAAAAGTGTCGAAAATGAAAAGTT 57.151 25.926 0.00 0.00 0.00 2.66
2966 4355 9.849166 TTTCTAAAAGTGTCGAAAATGAAAAGT 57.151 25.926 0.00 0.00 0.00 2.66
2971 4360 9.243637 CCAAATTTCTAAAAGTGTCGAAAATGA 57.756 29.630 0.00 0.00 0.00 2.57
2972 4361 9.030301 ACCAAATTTCTAAAAGTGTCGAAAATG 57.970 29.630 0.00 0.00 0.00 2.32
2973 4362 9.594478 AACCAAATTTCTAAAAGTGTCGAAAAT 57.406 25.926 0.00 0.00 0.00 1.82
2974 4363 8.989653 AACCAAATTTCTAAAAGTGTCGAAAA 57.010 26.923 0.00 0.00 0.00 2.29
2975 4364 8.989653 AAACCAAATTTCTAAAAGTGTCGAAA 57.010 26.923 0.00 0.00 0.00 3.46
2976 4365 8.865001 CAAAACCAAATTTCTAAAAGTGTCGAA 58.135 29.630 0.00 0.00 0.00 3.71
2977 4366 8.244802 TCAAAACCAAATTTCTAAAAGTGTCGA 58.755 29.630 0.00 0.00 0.00 4.20
2978 4367 8.318167 GTCAAAACCAAATTTCTAAAAGTGTCG 58.682 33.333 0.00 0.00 0.00 4.35
2979 4368 8.600625 GGTCAAAACCAAATTTCTAAAAGTGTC 58.399 33.333 0.00 0.00 45.68 3.67
2980 4369 8.487313 GGTCAAAACCAAATTTCTAAAAGTGT 57.513 30.769 0.00 0.00 45.68 3.55
3014 4403 7.041721 GTCCTGAAAACTGGTTCAAGATTTTT 58.958 34.615 0.00 0.00 37.08 1.94
3015 4404 6.381133 AGTCCTGAAAACTGGTTCAAGATTTT 59.619 34.615 0.00 0.00 37.08 1.82
3016 4405 5.893824 AGTCCTGAAAACTGGTTCAAGATTT 59.106 36.000 0.00 0.00 37.08 2.17
3017 4406 5.449553 AGTCCTGAAAACTGGTTCAAGATT 58.550 37.500 0.00 0.00 37.08 2.40
3018 4407 5.053978 AGTCCTGAAAACTGGTTCAAGAT 57.946 39.130 0.00 0.00 37.08 2.40
3019 4408 4.503714 AGTCCTGAAAACTGGTTCAAGA 57.496 40.909 0.00 0.00 37.08 3.02
3020 4409 5.823045 ACTAAGTCCTGAAAACTGGTTCAAG 59.177 40.000 0.00 0.00 37.08 3.02
3021 4410 5.751586 ACTAAGTCCTGAAAACTGGTTCAA 58.248 37.500 0.00 0.00 37.08 2.69
3022 4411 5.367945 ACTAAGTCCTGAAAACTGGTTCA 57.632 39.130 0.00 0.00 36.15 3.18
3023 4412 6.694877 AAACTAAGTCCTGAAAACTGGTTC 57.305 37.500 0.00 0.00 0.00 3.62
3024 4413 6.436218 ACAAAACTAAGTCCTGAAAACTGGTT 59.564 34.615 0.00 0.00 0.00 3.67
3025 4414 5.949952 ACAAAACTAAGTCCTGAAAACTGGT 59.050 36.000 0.00 0.00 0.00 4.00
3026 4415 6.451064 ACAAAACTAAGTCCTGAAAACTGG 57.549 37.500 0.00 0.00 0.00 4.00
3027 4416 7.535139 TCAACAAAACTAAGTCCTGAAAACTG 58.465 34.615 0.00 0.00 0.00 3.16
3028 4417 7.696992 TCAACAAAACTAAGTCCTGAAAACT 57.303 32.000 0.00 0.00 0.00 2.66
3029 4418 8.807581 CATTCAACAAAACTAAGTCCTGAAAAC 58.192 33.333 0.00 0.00 0.00 2.43
3030 4419 7.978975 CCATTCAACAAAACTAAGTCCTGAAAA 59.021 33.333 0.00 0.00 0.00 2.29
3031 4420 7.123547 ACCATTCAACAAAACTAAGTCCTGAAA 59.876 33.333 0.00 0.00 0.00 2.69
3032 4421 6.605594 ACCATTCAACAAAACTAAGTCCTGAA 59.394 34.615 0.00 0.00 0.00 3.02
3033 4422 6.126409 ACCATTCAACAAAACTAAGTCCTGA 58.874 36.000 0.00 0.00 0.00 3.86
3034 4423 6.391227 ACCATTCAACAAAACTAAGTCCTG 57.609 37.500 0.00 0.00 0.00 3.86
3035 4424 7.418337 AAACCATTCAACAAAACTAAGTCCT 57.582 32.000 0.00 0.00 0.00 3.85
3036 4425 8.192110 TGTAAACCATTCAACAAAACTAAGTCC 58.808 33.333 0.00 0.00 0.00 3.85
3037 4426 9.016623 GTGTAAACCATTCAACAAAACTAAGTC 57.983 33.333 0.00 0.00 0.00 3.01
3038 4427 8.745590 AGTGTAAACCATTCAACAAAACTAAGT 58.254 29.630 0.00 0.00 0.00 2.24
3039 4428 9.581099 AAGTGTAAACCATTCAACAAAACTAAG 57.419 29.630 0.00 0.00 0.00 2.18
3040 4429 9.930693 AAAGTGTAAACCATTCAACAAAACTAA 57.069 25.926 0.00 0.00 0.00 2.24
3041 4430 9.930693 AAAAGTGTAAACCATTCAACAAAACTA 57.069 25.926 0.00 0.00 0.00 2.24
3042 4431 8.716909 CAAAAGTGTAAACCATTCAACAAAACT 58.283 29.630 0.00 0.00 0.00 2.66
3043 4432 8.713271 TCAAAAGTGTAAACCATTCAACAAAAC 58.287 29.630 0.00 0.00 0.00 2.43
3044 4433 8.833231 TCAAAAGTGTAAACCATTCAACAAAA 57.167 26.923 0.00 0.00 0.00 2.44
3045 4434 8.833231 TTCAAAAGTGTAAACCATTCAACAAA 57.167 26.923 0.00 0.00 0.00 2.83
3046 4435 8.833231 TTTCAAAAGTGTAAACCATTCAACAA 57.167 26.923 0.00 0.00 0.00 2.83
3047 4436 8.713271 GTTTTCAAAAGTGTAAACCATTCAACA 58.287 29.630 0.00 0.00 38.44 3.33
3048 4437 8.931775 AGTTTTCAAAAGTGTAAACCATTCAAC 58.068 29.630 5.63 0.00 42.75 3.18
3049 4438 9.495572 AAGTTTTCAAAAGTGTAAACCATTCAA 57.504 25.926 5.63 0.00 42.75 2.69
3053 4442 9.930693 TGTTAAGTTTTCAAAAGTGTAAACCAT 57.069 25.926 5.63 0.22 42.75 3.55
3054 4443 9.930693 ATGTTAAGTTTTCAAAAGTGTAAACCA 57.069 25.926 5.63 0.00 42.75 3.67
3060 4449 9.921637 TTCTGAATGTTAAGTTTTCAAAAGTGT 57.078 25.926 0.00 0.00 0.00 3.55
3067 4456 9.515020 GTGTGAATTCTGAATGTTAAGTTTTCA 57.485 29.630 7.05 0.00 0.00 2.69
3068 4457 9.736023 AGTGTGAATTCTGAATGTTAAGTTTTC 57.264 29.630 7.05 0.00 0.00 2.29
3075 4464 7.815840 TTGGAAGTGTGAATTCTGAATGTTA 57.184 32.000 7.05 0.00 0.00 2.41
3156 4550 3.792047 CTCATGCACACGTGGCCG 61.792 66.667 21.57 13.41 40.83 6.13
3158 4552 4.107051 GGCTCATGCACACGTGGC 62.107 66.667 21.57 19.77 41.91 5.01
3160 4554 3.434319 GGGGCTCATGCACACGTG 61.434 66.667 15.48 15.48 46.28 4.49
3161 4555 3.952508 TGGGGCTCATGCACACGT 61.953 61.111 0.00 0.00 46.28 4.49
3162 4556 3.434319 GTGGGGCTCATGCACACG 61.434 66.667 0.00 0.00 46.28 4.49
3163 4557 3.064324 GGTGGGGCTCATGCACAC 61.064 66.667 0.00 0.00 46.28 3.82
3164 4558 3.572447 CTGGTGGGGCTCATGCACA 62.572 63.158 0.00 0.00 46.28 4.57
3165 4559 2.753043 CTGGTGGGGCTCATGCAC 60.753 66.667 0.00 0.00 43.08 4.57
3166 4560 4.051167 CCTGGTGGGGCTCATGCA 62.051 66.667 0.00 0.00 41.91 3.96
3167 4561 3.711059 CTCCTGGTGGGGCTCATGC 62.711 68.421 0.00 0.00 38.76 4.06
3168 4562 2.593978 CTCCTGGTGGGGCTCATG 59.406 66.667 0.00 0.00 35.33 3.07
3173 4567 2.610859 TCTTCCTCCTGGTGGGGC 60.611 66.667 14.48 0.00 35.33 5.80
3185 4579 4.437682 TCTCTCTCATCTCTCCTCTTCC 57.562 50.000 0.00 0.00 0.00 3.46
3196 4590 4.559862 TGTTTTCCCCTTCTCTCTCATC 57.440 45.455 0.00 0.00 0.00 2.92
3197 4591 4.290722 ACATGTTTTCCCCTTCTCTCTCAT 59.709 41.667 0.00 0.00 0.00 2.90
3205 4599 1.000843 GCCACACATGTTTTCCCCTTC 59.999 52.381 0.00 0.00 0.00 3.46
3206 4600 1.047801 GCCACACATGTTTTCCCCTT 58.952 50.000 0.00 0.00 0.00 3.95
3207 4601 0.831711 GGCCACACATGTTTTCCCCT 60.832 55.000 0.00 0.00 0.00 4.79
3211 4605 1.118356 TGGGGGCCACACATGTTTTC 61.118 55.000 3.04 0.00 0.00 2.29
3224 4620 1.118356 TGGTTGTCAAATGTGGGGGC 61.118 55.000 0.00 0.00 0.00 5.80
3237 4828 5.592282 TGACAATGTTGACAATACTGGTTGT 59.408 36.000 0.00 0.70 44.53 3.32
3271 4862 9.462606 AATTAGTTTCTTGGATAACCCTACTTG 57.537 33.333 0.00 0.00 35.38 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.