Multiple sequence alignment - TraesCS2A01G059800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G059800 chr2A 100.000 9230 0 0 1 9230 25486953 25477724 0.000000e+00 17045.0
1 TraesCS2A01G059800 chr2A 97.101 69 2 0 2902 2970 25484019 25483951 5.860000e-22 117.0
2 TraesCS2A01G059800 chr2A 97.101 69 2 0 2935 3003 25484052 25483984 5.860000e-22 117.0
3 TraesCS2A01G059800 chr2D 94.294 5240 184 42 3634 8820 23306864 23312041 0.000000e+00 7914.0
4 TraesCS2A01G059800 chr2D 92.941 1360 74 10 1614 2968 23305015 23306357 0.000000e+00 1960.0
5 TraesCS2A01G059800 chr2D 91.638 586 26 9 2935 3500 23306291 23306873 0.000000e+00 789.0
6 TraesCS2A01G059800 chr2D 84.040 495 65 9 230 714 23303909 23304399 1.820000e-126 464.0
7 TraesCS2A01G059800 chr2D 89.521 334 15 10 809 1126 23304481 23304810 1.120000e-108 405.0
8 TraesCS2A01G059800 chr2D 95.876 194 6 2 1 192 23302603 23302796 6.960000e-81 313.0
9 TraesCS2A01G059800 chr2D 91.005 189 15 2 1049 1237 23304835 23305021 4.280000e-63 254.0
10 TraesCS2A01G059800 chr2D 97.030 101 1 1 8817 8915 23312220 23312320 1.590000e-37 169.0
11 TraesCS2A01G059800 chr2D 92.632 95 6 1 2562 2656 572683042 572682949 1.620000e-27 135.0
12 TraesCS2A01G059800 chr2D 100.000 34 0 0 2902 2935 23306324 23306357 7.740000e-06 63.9
13 TraesCS2A01G059800 chr2D 96.970 33 1 0 2968 3000 23306291 23306323 1.000000e-03 56.5
14 TraesCS2A01G059800 chr2B 94.283 3376 133 25 4158 7506 37002371 36999029 0.000000e+00 5110.0
15 TraesCS2A01G059800 chr2B 96.098 1179 28 8 7660 8820 36999031 36997853 0.000000e+00 1906.0
16 TraesCS2A01G059800 chr2B 92.785 1289 76 10 1601 2874 37005019 37003733 0.000000e+00 1849.0
17 TraesCS2A01G059800 chr2B 93.551 1194 48 6 2989 4156 37003731 37002541 0.000000e+00 1751.0
18 TraesCS2A01G059800 chr2B 97.122 278 6 1 8826 9101 36997424 36997147 1.400000e-127 468.0
19 TraesCS2A01G059800 chr2B 80.201 596 69 33 1013 1594 37005634 37005074 1.440000e-107 401.0
20 TraesCS2A01G059800 chr2B 88.182 330 34 5 1 328 37007199 37006873 1.120000e-103 388.0
21 TraesCS2A01G059800 chr2B 79.241 395 48 23 746 1126 37005984 37005610 2.570000e-60 244.0
22 TraesCS2A01G059800 chr2B 90.698 43 4 0 707 749 183536445 183536487 3.600000e-04 58.4
23 TraesCS2A01G059800 chr2B 100.000 28 0 0 710 737 27810248 27810221 1.700000e-02 52.8
24 TraesCS2A01G059800 chr7D 79.273 1375 249 29 6881 8233 264760055 264758695 0.000000e+00 928.0
25 TraesCS2A01G059800 chr7B 79.273 1375 249 30 6881 8233 245075749 245074389 0.000000e+00 928.0
26 TraesCS2A01G059800 chr7B 100.000 28 0 0 710 737 739102402 739102429 1.700000e-02 52.8
27 TraesCS2A01G059800 chr5A 79.161 1382 256 29 6871 8233 566598393 566599761 0.000000e+00 928.0
28 TraesCS2A01G059800 chr5B 79.016 1382 258 29 6871 8233 547405225 547406593 0.000000e+00 917.0
29 TraesCS2A01G059800 chr5B 90.698 43 4 0 707 749 672542767 672542809 3.600000e-04 58.4
30 TraesCS2A01G059800 chr7A 78.863 1372 249 35 6881 8233 288932623 288931274 0.000000e+00 889.0
31 TraesCS2A01G059800 chr7A 96.386 83 3 0 2564 2646 252187683 252187601 4.490000e-28 137.0
32 TraesCS2A01G059800 chr7A 86.667 90 7 3 3525 3613 475978717 475978802 2.740000e-15 95.3
33 TraesCS2A01G059800 chr5D 80.779 411 75 4 6176 6584 448097003 448097411 1.500000e-82 318.0
34 TraesCS2A01G059800 chr5D 82.716 81 2 5 3553 3632 383305141 383305072 2.780000e-05 62.1
35 TraesCS2A01G059800 chr4D 92.857 98 7 0 2556 2653 36590522 36590425 9.660000e-30 143.0
36 TraesCS2A01G059800 chr4D 82.716 81 7 4 538 614 495111675 495111752 2.150000e-06 65.8
37 TraesCS2A01G059800 chr3B 93.333 90 5 1 2557 2646 776359538 776359626 2.090000e-26 132.0
38 TraesCS2A01G059800 chr3B 86.364 110 11 3 3524 3632 127931628 127931522 5.860000e-22 117.0
39 TraesCS2A01G059800 chr3B 81.818 77 13 1 538 613 820452730 820452806 7.740000e-06 63.9
40 TraesCS2A01G059800 chr3A 92.222 90 6 1 2557 2646 716368624 716368712 9.730000e-25 126.0
41 TraesCS2A01G059800 chr1A 87.850 107 10 3 2549 2654 587861407 587861303 1.260000e-23 122.0
42 TraesCS2A01G059800 chr6B 88.776 98 11 0 2559 2656 203685279 203685182 4.530000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G059800 chr2A 25477724 25486953 9229 True 5759.666667 17045 98.067333 1 9230 3 chr2A.!!$R1 9229
1 TraesCS2A01G059800 chr2D 23302603 23312320 9717 False 1238.840000 7914 93.331500 1 8915 10 chr2D.!!$F1 8914
2 TraesCS2A01G059800 chr2B 36997147 37007199 10052 True 1514.625000 5110 90.182875 1 9101 8 chr2B.!!$R2 9100
3 TraesCS2A01G059800 chr7D 264758695 264760055 1360 True 928.000000 928 79.273000 6881 8233 1 chr7D.!!$R1 1352
4 TraesCS2A01G059800 chr7B 245074389 245075749 1360 True 928.000000 928 79.273000 6881 8233 1 chr7B.!!$R1 1352
5 TraesCS2A01G059800 chr5A 566598393 566599761 1368 False 928.000000 928 79.161000 6871 8233 1 chr5A.!!$F1 1362
6 TraesCS2A01G059800 chr5B 547405225 547406593 1368 False 917.000000 917 79.016000 6871 8233 1 chr5B.!!$F1 1362
7 TraesCS2A01G059800 chr7A 288931274 288932623 1349 True 889.000000 889 78.863000 6881 8233 1 chr7A.!!$R2 1352

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
389 1906 0.037326 TTGGTCTCTGACGGATGTGC 60.037 55.000 0.00 0.00 32.65 4.57 F
990 2606 0.104120 TGCCACGATCCGAAATCGAT 59.896 50.000 21.73 0.00 43.59 3.59 F
1241 3070 0.108585 TGTTCTGTCTTCTGGGTGCC 59.891 55.000 0.00 0.00 0.00 5.01 F
2855 4773 0.250513 GCCACTCCCTGTACTCTTGG 59.749 60.000 0.00 0.00 0.00 3.61 F
3003 4921 0.178961 AAGGGGGCTTTGAGTTCACC 60.179 55.000 0.00 0.00 0.00 4.02 F
3006 4924 0.251787 GGGGCTTTGAGTTCACCCAT 60.252 55.000 8.15 0.00 42.76 4.00 F
4324 6448 0.382873 TGCTTGTGCAGTTCTGCTTG 59.617 50.000 22.44 12.22 45.31 4.01 F
4831 6960 0.676466 TGGTACAGCAAATGGAGGCG 60.676 55.000 0.00 0.00 34.54 5.52 F
5724 7883 1.202222 CGCTGAAAGATGGCATGAACC 60.202 52.381 3.81 0.00 34.07 3.62 F
7398 9568 0.321653 GTGAGGGTGTTGCGGAGATT 60.322 55.000 0.00 0.00 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1222 3051 0.108585 GGCACCCAGAAGACAGAACA 59.891 55.000 0.00 0.00 0.00 3.18 R
2984 4902 0.178961 GGTGAACTCAAAGCCCCCTT 60.179 55.000 0.00 0.00 0.00 3.95 R
2987 4905 0.251787 ATGGGTGAACTCAAAGCCCC 60.252 55.000 0.00 0.02 38.57 5.80 R
4813 6942 1.376609 CCGCCTCCATTTGCTGTACC 61.377 60.000 0.00 0.00 0.00 3.34 R
4831 6960 6.597562 TGGGTGTTGATATAGTTATTCCACC 58.402 40.000 0.00 0.00 39.22 4.61 R
5193 7331 7.335924 GGCGCACTTAAAATCCCAATATATAGA 59.664 37.037 10.83 0.00 0.00 1.98 R
5724 7883 0.716108 GCAGTAGCGCTTGTGTACTG 59.284 55.000 25.86 25.86 44.36 2.74 R
5915 8074 1.669999 ATTCAATGCTTCCGCCAGGC 61.670 55.000 0.00 0.00 37.47 4.85 R
7660 9830 1.301558 GCATCAGCCCTCCATCTCG 60.302 63.158 0.00 0.00 33.58 4.04 R
8247 10426 1.285280 TGCAGGCTATAACCACCAGT 58.715 50.000 0.00 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
149 152 8.142551 GCTAGTATGGTAGTTGTGCTAGTATTT 58.857 37.037 0.00 0.00 32.78 1.40
159 162 5.499004 TGTGCTAGTATTTGGGTTCTTCT 57.501 39.130 0.00 0.00 0.00 2.85
192 195 2.299993 TGCTGAGTCATCCGACATTC 57.700 50.000 0.00 0.00 45.23 2.67
193 196 1.827344 TGCTGAGTCATCCGACATTCT 59.173 47.619 0.00 0.00 45.23 2.40
228 1114 0.319297 GACGGTAGTGCTCGGTGTTT 60.319 55.000 0.00 0.00 0.00 2.83
265 1343 3.610669 CGGCGGCATCCTAGAGCT 61.611 66.667 10.53 0.00 0.00 4.09
292 1370 4.220163 TCCTCGCCGCCCTATCCT 62.220 66.667 0.00 0.00 0.00 3.24
297 1375 1.071471 CGCCGCCCTATCCTCATTT 59.929 57.895 0.00 0.00 0.00 2.32
299 1377 0.951040 GCCGCCCTATCCTCATTTCG 60.951 60.000 0.00 0.00 0.00 3.46
324 1402 3.546407 CGTCTAGCGCCGATAAAGT 57.454 52.632 2.29 0.00 0.00 2.66
328 1845 0.577269 CTAGCGCCGATAAAGTGCAC 59.423 55.000 9.40 9.40 43.21 4.57
343 1860 1.367840 GCACGTGGAGGTGTCTCTT 59.632 57.895 18.88 0.00 40.08 2.85
349 1866 1.048601 TGGAGGTGTCTCTTGTGGAC 58.951 55.000 0.00 0.00 39.86 4.02
365 1882 3.329225 TGTGGACTTGATTGGGTCATGTA 59.671 43.478 0.00 0.00 43.10 2.29
367 1884 3.054434 TGGACTTGATTGGGTCATGTAGG 60.054 47.826 0.00 0.00 43.10 3.18
378 1895 2.237392 GGTCATGTAGGCTTTGGTCTCT 59.763 50.000 0.00 0.00 0.00 3.10
382 1899 1.272490 TGTAGGCTTTGGTCTCTGACG 59.728 52.381 0.00 0.00 32.65 4.35
386 1903 1.363744 GCTTTGGTCTCTGACGGATG 58.636 55.000 0.00 0.00 32.65 3.51
389 1906 0.037326 TTGGTCTCTGACGGATGTGC 60.037 55.000 0.00 0.00 32.65 4.57
403 1920 2.292267 GATGTGCTTGGATCCAATCGT 58.708 47.619 27.20 19.77 35.20 3.73
405 1922 1.003003 TGTGCTTGGATCCAATCGTCA 59.997 47.619 27.20 20.82 35.20 4.35
422 1939 2.801111 CGTCATTGATCTCAGGCAGATG 59.199 50.000 0.00 0.00 42.48 2.90
423 1940 3.740452 CGTCATTGATCTCAGGCAGATGT 60.740 47.826 0.00 0.00 42.48 3.06
437 1954 0.917533 AGATGTGCTTGGATCTGGCT 59.082 50.000 0.00 0.00 0.00 4.75
479 2052 0.320374 CTTGCAGGTACGGTTCTCCA 59.680 55.000 0.00 0.00 0.00 3.86
481 2054 0.541063 TGCAGGTACGGTTCTCCAGA 60.541 55.000 0.00 0.00 0.00 3.86
484 2057 1.065701 CAGGTACGGTTCTCCAGATCG 59.934 57.143 0.00 0.00 0.00 3.69
496 2071 3.005472 TCTCCAGATCGACGTTTTGTCTT 59.995 43.478 0.00 0.00 45.87 3.01
499 2074 3.218398 CAGATCGACGTTTTGTCTTTGC 58.782 45.455 0.00 0.00 45.87 3.68
511 2087 1.202592 TGTCTTTGCCAGCGACAACTA 60.203 47.619 0.00 0.00 34.99 2.24
520 2096 0.389166 AGCGACAACTAGTGCTCTGC 60.389 55.000 0.00 2.98 31.80 4.26
522 2098 0.109735 CGACAACTAGTGCTCTGCGA 60.110 55.000 0.00 0.00 0.00 5.10
524 2100 0.673985 ACAACTAGTGCTCTGCGACA 59.326 50.000 0.00 0.00 0.00 4.35
527 2103 1.822506 ACTAGTGCTCTGCGACACTA 58.177 50.000 0.00 3.15 45.09 2.74
539 2115 1.546961 CGACACTAGTCCTCCAAGGT 58.453 55.000 0.00 0.00 41.87 3.50
546 2122 4.080863 CACTAGTCCTCCAAGGTTTAGCAT 60.081 45.833 0.00 0.00 36.53 3.79
547 2123 5.128827 CACTAGTCCTCCAAGGTTTAGCATA 59.871 44.000 0.00 0.00 36.53 3.14
549 2125 5.717119 AGTCCTCCAAGGTTTAGCATAAT 57.283 39.130 0.00 0.00 36.53 1.28
592 2171 1.074775 ATGGTTTGCTTGGCTCCGA 59.925 52.632 0.00 0.00 0.00 4.55
594 2173 2.556287 GTTTGCTTGGCTCCGACG 59.444 61.111 0.00 0.00 0.00 5.12
619 2202 1.450134 GGACGATGATGGCAGTGCA 60.450 57.895 18.61 3.40 0.00 4.57
626 2209 0.321475 TGATGGCAGTGCACATTCGA 60.321 50.000 21.04 4.91 0.00 3.71
657 2240 3.982576 TGCATGTAGTCGTCGATGTAT 57.017 42.857 4.21 0.00 0.00 2.29
659 2242 3.564225 TGCATGTAGTCGTCGATGTATCT 59.436 43.478 4.21 5.00 0.00 1.98
718 2304 9.006839 TGTACCACTATTACATCTAATACTCCG 57.993 37.037 0.00 0.00 0.00 4.63
719 2305 6.921914 ACCACTATTACATCTAATACTCCGC 58.078 40.000 0.00 0.00 0.00 5.54
720 2306 6.071503 ACCACTATTACATCTAATACTCCGCC 60.072 42.308 0.00 0.00 0.00 6.13
721 2307 6.331061 CACTATTACATCTAATACTCCGCCC 58.669 44.000 0.00 0.00 0.00 6.13
722 2308 3.928727 TTACATCTAATACTCCGCCCG 57.071 47.619 0.00 0.00 0.00 6.13
723 2309 1.700955 ACATCTAATACTCCGCCCGT 58.299 50.000 0.00 0.00 0.00 5.28
724 2310 1.612463 ACATCTAATACTCCGCCCGTC 59.388 52.381 0.00 0.00 0.00 4.79
725 2311 1.067776 CATCTAATACTCCGCCCGTCC 60.068 57.143 0.00 0.00 0.00 4.79
726 2312 0.825010 TCTAATACTCCGCCCGTCCC 60.825 60.000 0.00 0.00 0.00 4.46
727 2313 1.076118 TAATACTCCGCCCGTCCCA 60.076 57.895 0.00 0.00 0.00 4.37
728 2314 0.687098 TAATACTCCGCCCGTCCCAA 60.687 55.000 0.00 0.00 0.00 4.12
729 2315 1.555477 AATACTCCGCCCGTCCCAAA 61.555 55.000 0.00 0.00 0.00 3.28
730 2316 1.555477 ATACTCCGCCCGTCCCAAAA 61.555 55.000 0.00 0.00 0.00 2.44
731 2317 1.555477 TACTCCGCCCGTCCCAAAAT 61.555 55.000 0.00 0.00 0.00 1.82
732 2318 1.222387 CTCCGCCCGTCCCAAAATA 59.778 57.895 0.00 0.00 0.00 1.40
733 2319 0.393267 CTCCGCCCGTCCCAAAATAA 60.393 55.000 0.00 0.00 0.00 1.40
734 2320 0.393267 TCCGCCCGTCCCAAAATAAG 60.393 55.000 0.00 0.00 0.00 1.73
735 2321 0.678684 CCGCCCGTCCCAAAATAAGT 60.679 55.000 0.00 0.00 0.00 2.24
736 2322 0.450184 CGCCCGTCCCAAAATAAGTG 59.550 55.000 0.00 0.00 0.00 3.16
737 2323 1.828979 GCCCGTCCCAAAATAAGTGA 58.171 50.000 0.00 0.00 0.00 3.41
738 2324 1.471287 GCCCGTCCCAAAATAAGTGAC 59.529 52.381 0.00 0.00 0.00 3.67
739 2325 2.878526 GCCCGTCCCAAAATAAGTGACT 60.879 50.000 0.00 0.00 0.00 3.41
740 2326 3.007635 CCCGTCCCAAAATAAGTGACTC 58.992 50.000 0.00 0.00 0.00 3.36
741 2327 3.558321 CCCGTCCCAAAATAAGTGACTCA 60.558 47.826 0.00 0.00 0.00 3.41
742 2328 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
743 2329 4.083484 CCGTCCCAAAATAAGTGACTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
744 2330 4.755123 CGTCCCAAAATAAGTGACTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
745 2331 5.238650 CGTCCCAAAATAAGTGACTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
746 2332 6.425721 CGTCCCAAAATAAGTGACTCAACTTA 59.574 38.462 0.00 0.00 44.52 2.24
804 2397 8.831715 ATTACAATGAACACAAATTTTCCCTC 57.168 30.769 0.00 0.00 0.00 4.30
805 2398 6.232581 ACAATGAACACAAATTTTCCCTCA 57.767 33.333 0.00 0.00 0.00 3.86
807 2400 7.281841 ACAATGAACACAAATTTTCCCTCATT 58.718 30.769 8.49 8.49 33.66 2.57
808 2401 8.428063 ACAATGAACACAAATTTTCCCTCATTA 58.572 29.630 11.89 0.00 32.50 1.90
986 2602 2.461110 GCGTGCCACGATCCGAAAT 61.461 57.895 23.33 0.00 46.05 2.17
990 2606 0.104120 TGCCACGATCCGAAATCGAT 59.896 50.000 21.73 0.00 43.59 3.59
993 2615 1.419374 CACGATCCGAAATCGATCCC 58.581 55.000 21.73 0.00 43.59 3.85
1089 2918 4.731612 CAGGCGTCGCAGCAGAGT 62.732 66.667 20.50 0.00 39.27 3.24
1193 3022 0.676782 CCCAGGTGATTCGGTTGGAC 60.677 60.000 2.70 0.00 0.00 4.02
1217 3046 3.280532 GCATTTCGCGTCTGTTCTG 57.719 52.632 5.77 0.00 0.00 3.02
1221 3050 1.214367 TTTCGCGTCTGTTCTGTTCC 58.786 50.000 5.77 0.00 0.00 3.62
1222 3051 0.387929 TTCGCGTCTGTTCTGTTCCT 59.612 50.000 5.77 0.00 0.00 3.36
1223 3052 0.318699 TCGCGTCTGTTCTGTTCCTG 60.319 55.000 5.77 0.00 0.00 3.86
1225 3054 1.583054 GCGTCTGTTCTGTTCCTGTT 58.417 50.000 0.00 0.00 0.00 3.16
1226 3055 1.527311 GCGTCTGTTCTGTTCCTGTTC 59.473 52.381 0.00 0.00 0.00 3.18
1227 3056 2.803492 GCGTCTGTTCTGTTCCTGTTCT 60.803 50.000 0.00 0.00 0.00 3.01
1228 3057 2.797156 CGTCTGTTCTGTTCCTGTTCTG 59.203 50.000 0.00 0.00 0.00 3.02
1229 3058 3.738281 CGTCTGTTCTGTTCCTGTTCTGT 60.738 47.826 0.00 0.00 0.00 3.41
1230 3059 3.804873 GTCTGTTCTGTTCCTGTTCTGTC 59.195 47.826 0.00 0.00 0.00 3.51
1231 3060 3.706594 TCTGTTCTGTTCCTGTTCTGTCT 59.293 43.478 0.00 0.00 0.00 3.41
1232 3061 4.162320 TCTGTTCTGTTCCTGTTCTGTCTT 59.838 41.667 0.00 0.00 0.00 3.01
1233 3062 4.442706 TGTTCTGTTCCTGTTCTGTCTTC 58.557 43.478 0.00 0.00 0.00 2.87
1234 3063 4.162320 TGTTCTGTTCCTGTTCTGTCTTCT 59.838 41.667 0.00 0.00 0.00 2.85
1235 3064 4.327982 TCTGTTCCTGTTCTGTCTTCTG 57.672 45.455 0.00 0.00 0.00 3.02
1236 3065 3.070159 TCTGTTCCTGTTCTGTCTTCTGG 59.930 47.826 0.00 0.00 0.00 3.86
1237 3066 2.104792 TGTTCCTGTTCTGTCTTCTGGG 59.895 50.000 0.00 0.00 0.00 4.45
1238 3067 2.103153 TCCTGTTCTGTCTTCTGGGT 57.897 50.000 0.00 0.00 0.00 4.51
1239 3068 1.694150 TCCTGTTCTGTCTTCTGGGTG 59.306 52.381 0.00 0.00 0.00 4.61
1240 3069 1.517242 CTGTTCTGTCTTCTGGGTGC 58.483 55.000 0.00 0.00 0.00 5.01
1241 3070 0.108585 TGTTCTGTCTTCTGGGTGCC 59.891 55.000 0.00 0.00 0.00 5.01
1242 3071 0.951040 GTTCTGTCTTCTGGGTGCCG 60.951 60.000 0.00 0.00 0.00 5.69
1243 3072 1.407656 TTCTGTCTTCTGGGTGCCGT 61.408 55.000 0.00 0.00 0.00 5.68
1244 3073 1.071471 CTGTCTTCTGGGTGCCGTT 59.929 57.895 0.00 0.00 0.00 4.44
1245 3074 0.951040 CTGTCTTCTGGGTGCCGTTC 60.951 60.000 0.00 0.00 0.00 3.95
1249 3078 2.436087 CTTCTGGGTGCCGTTCGTCT 62.436 60.000 0.00 0.00 0.00 4.18
1257 3086 2.244651 GCCGTTCGTCTTGTGCAGT 61.245 57.895 0.00 0.00 0.00 4.40
1262 3091 0.867746 TTCGTCTTGTGCAGTGCATC 59.132 50.000 22.87 15.14 41.91 3.91
1263 3092 0.950555 TCGTCTTGTGCAGTGCATCC 60.951 55.000 22.87 10.10 41.91 3.51
1266 3095 2.672651 TTGTGCAGTGCATCCGGG 60.673 61.111 22.87 0.00 41.91 5.73
1267 3096 4.720902 TGTGCAGTGCATCCGGGG 62.721 66.667 22.87 0.00 41.91 5.73
1268 3097 4.408821 GTGCAGTGCATCCGGGGA 62.409 66.667 22.87 0.00 41.91 4.81
1269 3098 4.100084 TGCAGTGCATCCGGGGAG 62.100 66.667 15.37 0.00 31.71 4.30
1271 3100 4.181010 CAGTGCATCCGGGGAGGG 62.181 72.222 0.00 0.00 41.52 4.30
1276 3105 2.447765 CATCCGGGGAGGGGCTTA 60.448 66.667 0.00 0.00 41.52 3.09
1277 3106 1.847968 CATCCGGGGAGGGGCTTAT 60.848 63.158 0.00 0.00 41.52 1.73
1278 3107 1.072930 ATCCGGGGAGGGGCTTATT 60.073 57.895 0.00 0.00 41.52 1.40
1288 3117 1.891919 GGGCTTATTGCGCGGATCA 60.892 57.895 8.83 0.00 44.49 2.92
1303 3132 2.738314 CGGATCATCGCATTGCTGATAA 59.262 45.455 11.97 2.06 30.00 1.75
1325 3154 2.724977 TCTTCGTTGCAGTAGTCAGG 57.275 50.000 0.00 0.00 0.00 3.86
1333 3162 3.953712 TGCAGTAGTCAGGATCGAAAA 57.046 42.857 0.00 0.00 0.00 2.29
1335 3164 3.258372 TGCAGTAGTCAGGATCGAAAACT 59.742 43.478 0.00 0.00 0.00 2.66
1336 3165 3.860536 GCAGTAGTCAGGATCGAAAACTC 59.139 47.826 0.00 0.00 0.00 3.01
1339 3168 3.601443 AGTCAGGATCGAAAACTCTGG 57.399 47.619 0.00 0.00 0.00 3.86
1341 3170 2.028020 GTCAGGATCGAAAACTCTGGGT 60.028 50.000 0.00 0.00 0.00 4.51
1342 3171 2.637872 TCAGGATCGAAAACTCTGGGTT 59.362 45.455 0.00 0.00 40.28 4.11
1344 3173 2.027100 AGGATCGAAAACTCTGGGTTCC 60.027 50.000 0.00 0.00 37.12 3.62
1345 3174 2.027100 GGATCGAAAACTCTGGGTTCCT 60.027 50.000 0.00 0.00 37.12 3.36
1346 3175 3.559384 GGATCGAAAACTCTGGGTTCCTT 60.559 47.826 0.00 0.00 37.12 3.36
1347 3176 3.570912 TCGAAAACTCTGGGTTCCTTT 57.429 42.857 0.00 0.00 37.12 3.11
1348 3177 3.211045 TCGAAAACTCTGGGTTCCTTTG 58.789 45.455 0.00 0.00 37.12 2.77
1349 3178 3.118186 TCGAAAACTCTGGGTTCCTTTGA 60.118 43.478 0.00 0.00 37.12 2.69
1350 3179 3.821033 CGAAAACTCTGGGTTCCTTTGAT 59.179 43.478 0.00 0.00 37.12 2.57
1351 3180 4.278419 CGAAAACTCTGGGTTCCTTTGATT 59.722 41.667 0.00 0.00 37.12 2.57
1352 3181 5.532557 GAAAACTCTGGGTTCCTTTGATTG 58.467 41.667 0.00 0.00 37.12 2.67
1353 3182 3.160679 ACTCTGGGTTCCTTTGATTGG 57.839 47.619 0.00 0.00 0.00 3.16
1354 3183 2.716424 ACTCTGGGTTCCTTTGATTGGA 59.284 45.455 0.00 0.00 0.00 3.53
1355 3184 3.140144 ACTCTGGGTTCCTTTGATTGGAA 59.860 43.478 0.00 0.00 40.85 3.53
1356 3185 3.760684 CTCTGGGTTCCTTTGATTGGAAG 59.239 47.826 0.00 0.00 43.37 3.46
1357 3186 3.397618 TCTGGGTTCCTTTGATTGGAAGA 59.602 43.478 0.00 0.00 43.37 2.87
1358 3187 4.044571 TCTGGGTTCCTTTGATTGGAAGAT 59.955 41.667 0.00 0.00 43.37 2.40
1359 3188 4.088634 TGGGTTCCTTTGATTGGAAGATG 58.911 43.478 0.00 0.00 43.37 2.90
1360 3189 3.448660 GGGTTCCTTTGATTGGAAGATGG 59.551 47.826 0.00 0.00 43.37 3.51
1361 3190 4.089361 GGTTCCTTTGATTGGAAGATGGT 58.911 43.478 0.00 0.00 43.37 3.55
1362 3191 4.082026 GGTTCCTTTGATTGGAAGATGGTG 60.082 45.833 0.00 0.00 43.37 4.17
1367 3196 3.805066 TGATTGGAAGATGGTGGTTCA 57.195 42.857 0.00 0.00 0.00 3.18
1380 3209 5.165961 TGGTGGTTCAAATTTGGACAAAA 57.834 34.783 27.00 12.13 38.46 2.44
1381 3210 5.560724 TGGTGGTTCAAATTTGGACAAAAA 58.439 33.333 27.00 8.52 38.46 1.94
1412 3263 6.470557 TGTAGAGTGTTTATTTTGGTACGC 57.529 37.500 0.00 0.00 0.00 4.42
1449 3300 9.970553 ATATATTGTAAGACTTGATGATGCCAT 57.029 29.630 0.00 0.00 35.29 4.40
1458 3309 5.198207 ACTTGATGATGCCATGAATCTTCA 58.802 37.500 16.34 16.34 42.14 3.02
1459 3310 5.299531 ACTTGATGATGCCATGAATCTTCAG 59.700 40.000 18.06 15.72 41.08 3.02
1462 3313 6.775708 TGATGATGCCATGAATCTTCAGATA 58.224 36.000 16.34 2.68 41.08 1.98
1518 3370 4.947388 TCTTAGTTTGTTGCCACTTGAAGT 59.053 37.500 0.00 0.00 0.00 3.01
1521 3373 2.292103 TTGTTGCCACTTGAAGTTGC 57.708 45.000 13.80 13.80 37.39 4.17
1535 3387 8.299570 CACTTGAAGTTGCTGGTAGATTTATTT 58.700 33.333 0.00 0.00 0.00 1.40
1537 3389 7.994425 TGAAGTTGCTGGTAGATTTATTTCA 57.006 32.000 0.00 0.00 0.00 2.69
1542 3394 7.807907 AGTTGCTGGTAGATTTATTTCAAAACG 59.192 33.333 0.00 0.00 0.00 3.60
1547 3399 8.568676 TGGTAGATTTATTTCAAAACGGATGA 57.431 30.769 0.00 0.00 0.00 2.92
1557 3409 7.579589 TTTCAAAACGGATGAATTGCTATTG 57.420 32.000 0.00 0.00 36.72 1.90
1559 3411 6.686630 TCAAAACGGATGAATTGCTATTGTT 58.313 32.000 0.00 0.00 0.00 2.83
1564 3416 4.736793 CGGATGAATTGCTATTGTTGCTTC 59.263 41.667 0.00 0.00 0.00 3.86
1643 3544 3.872696 TCTTGATCGGAAATGCTAGCAA 58.127 40.909 23.54 3.88 0.00 3.91
1645 3546 5.610398 TCTTGATCGGAAATGCTAGCAATA 58.390 37.500 23.54 0.00 0.00 1.90
1649 3550 4.875544 TCGGAAATGCTAGCAATAACAC 57.124 40.909 23.54 9.25 0.00 3.32
1714 3615 6.319048 ACAGAAGTATGGATCCAAGAATGT 57.681 37.500 20.67 15.43 0.00 2.71
1716 3617 6.118170 CAGAAGTATGGATCCAAGAATGTGT 58.882 40.000 20.67 1.44 0.00 3.72
1773 3674 4.601019 CACGTCAAAGTGATTCAAAGCTT 58.399 39.130 0.00 0.00 44.43 3.74
1800 3701 2.027003 TTGGTTTCGACTCGTTGGTT 57.973 45.000 0.00 0.00 0.00 3.67
1832 3733 4.262678 GGGACTTAAGAGGTATCATCAGCC 60.263 50.000 10.09 0.00 0.00 4.85
1838 3739 2.636893 AGAGGTATCATCAGCCCATCAC 59.363 50.000 0.00 0.00 0.00 3.06
1840 3741 3.834813 GAGGTATCATCAGCCCATCACTA 59.165 47.826 0.00 0.00 0.00 2.74
1842 3743 4.040952 AGGTATCATCAGCCCATCACTAAC 59.959 45.833 0.00 0.00 0.00 2.34
1849 3757 1.027357 GCCCATCACTAACTGCATGG 58.973 55.000 0.00 0.00 36.32 3.66
1860 3768 4.708421 ACTAACTGCATGGATTTGCTTCAT 59.292 37.500 0.00 0.00 43.18 2.57
1861 3769 4.546829 AACTGCATGGATTTGCTTCATT 57.453 36.364 0.00 0.00 43.18 2.57
1892 3800 3.006217 AGAGCTTCAATGGTTTTTCCTGC 59.994 43.478 0.00 0.00 37.07 4.85
1899 3807 1.178276 TGGTTTTTCCTGCACGTGTT 58.822 45.000 18.38 0.00 37.07 3.32
1901 3809 2.753452 TGGTTTTTCCTGCACGTGTTTA 59.247 40.909 18.38 3.28 37.07 2.01
1903 3811 4.142138 TGGTTTTTCCTGCACGTGTTTATT 60.142 37.500 18.38 0.00 37.07 1.40
1904 3812 4.208253 GGTTTTTCCTGCACGTGTTTATTG 59.792 41.667 18.38 0.57 0.00 1.90
1905 3813 2.697431 TTCCTGCACGTGTTTATTGC 57.303 45.000 18.38 0.56 36.76 3.56
1919 3832 8.026288 CGTGTTTATTGCGCGTTAAAATATAA 57.974 30.769 8.43 0.00 35.44 0.98
1980 3893 2.408271 TTGCTCTGAACATAGCTGGG 57.592 50.000 12.05 0.00 39.53 4.45
2067 3980 5.502079 AGTCCTACGGATAGTGAGGATATG 58.498 45.833 0.00 0.00 40.19 1.78
2410 4328 6.481644 ACGTTTCACATGGTAAAATTTTGCAT 59.518 30.769 18.84 9.01 0.00 3.96
2500 4418 4.508124 GCTACGGTGGAAGTCATATTTCTG 59.492 45.833 0.00 0.00 0.00 3.02
2510 4428 7.182026 TGGAAGTCATATTTCTGTCTTTCCCTA 59.818 37.037 0.00 0.00 0.00 3.53
2513 4431 8.840200 AGTCATATTTCTGTCTTTCCCTAGTA 57.160 34.615 0.00 0.00 0.00 1.82
2549 4467 3.561143 TGTGGTAAACAGCCTTCATGTT 58.439 40.909 0.00 0.00 42.55 2.71
2760 4678 0.700564 TTGGCTCAGAGAATTGCCCT 59.299 50.000 0.00 0.00 44.32 5.19
2855 4773 0.250513 GCCACTCCCTGTACTCTTGG 59.749 60.000 0.00 0.00 0.00 3.61
2898 4816 8.169977 ACATGTAAATTCTGCGGATTGATATT 57.830 30.769 0.00 0.00 0.00 1.28
2905 4823 9.725019 AAATTCTGCGGATTGATATTCATACTA 57.275 29.630 0.00 0.00 0.00 1.82
2954 4872 9.647797 TGAGTTTACTATTGTGTATGTGTAAGG 57.352 33.333 0.00 0.00 0.00 2.69
2968 4886 3.138653 TGTGTAAGGGGGCTTTGAGTTTA 59.861 43.478 0.00 0.00 0.00 2.01
2969 4887 3.504906 GTGTAAGGGGGCTTTGAGTTTAC 59.495 47.826 0.00 0.00 0.00 2.01
2970 4888 3.396611 TGTAAGGGGGCTTTGAGTTTACT 59.603 43.478 0.00 0.00 0.00 2.24
2971 4889 4.598373 TGTAAGGGGGCTTTGAGTTTACTA 59.402 41.667 0.00 0.00 0.00 1.82
2972 4890 4.948062 AAGGGGGCTTTGAGTTTACTAT 57.052 40.909 0.00 0.00 0.00 2.12
2973 4891 4.948062 AGGGGGCTTTGAGTTTACTATT 57.052 40.909 0.00 0.00 0.00 1.73
2974 4892 4.600062 AGGGGGCTTTGAGTTTACTATTG 58.400 43.478 0.00 0.00 0.00 1.90
2975 4893 4.044191 AGGGGGCTTTGAGTTTACTATTGT 59.956 41.667 0.00 0.00 0.00 2.71
2976 4894 4.157840 GGGGGCTTTGAGTTTACTATTGTG 59.842 45.833 0.00 0.00 0.00 3.33
2977 4895 4.765339 GGGGCTTTGAGTTTACTATTGTGT 59.235 41.667 0.00 0.00 0.00 3.72
2978 4896 5.941647 GGGGCTTTGAGTTTACTATTGTGTA 59.058 40.000 0.00 0.00 0.00 2.90
2979 4897 6.602009 GGGGCTTTGAGTTTACTATTGTGTAT 59.398 38.462 0.00 0.00 0.00 2.29
2980 4898 7.415206 GGGGCTTTGAGTTTACTATTGTGTATG 60.415 40.741 0.00 0.00 0.00 2.39
2981 4899 7.120726 GGGCTTTGAGTTTACTATTGTGTATGT 59.879 37.037 0.00 0.00 0.00 2.29
2982 4900 7.962918 GGCTTTGAGTTTACTATTGTGTATGTG 59.037 37.037 0.00 0.00 0.00 3.21
2983 4901 8.504005 GCTTTGAGTTTACTATTGTGTATGTGT 58.496 33.333 0.00 0.00 0.00 3.72
2987 4905 9.647797 TGAGTTTACTATTGTGTATGTGTAAGG 57.352 33.333 0.00 0.00 0.00 2.69
2988 4906 9.095065 GAGTTTACTATTGTGTATGTGTAAGGG 57.905 37.037 0.00 0.00 0.00 3.95
2989 4907 8.044908 AGTTTACTATTGTGTATGTGTAAGGGG 58.955 37.037 0.00 0.00 0.00 4.79
2990 4908 5.367945 ACTATTGTGTATGTGTAAGGGGG 57.632 43.478 0.00 0.00 0.00 5.40
2991 4909 2.500392 TTGTGTATGTGTAAGGGGGC 57.500 50.000 0.00 0.00 0.00 5.80
2992 4910 1.663911 TGTGTATGTGTAAGGGGGCT 58.336 50.000 0.00 0.00 0.00 5.19
2993 4911 1.989586 TGTGTATGTGTAAGGGGGCTT 59.010 47.619 0.00 0.00 0.00 4.35
2994 4912 2.377193 TGTGTATGTGTAAGGGGGCTTT 59.623 45.455 0.00 0.00 0.00 3.51
2995 4913 2.752903 GTGTATGTGTAAGGGGGCTTTG 59.247 50.000 0.00 0.00 0.00 2.77
2996 4914 2.645297 TGTATGTGTAAGGGGGCTTTGA 59.355 45.455 0.00 0.00 0.00 2.69
2997 4915 2.514458 ATGTGTAAGGGGGCTTTGAG 57.486 50.000 0.00 0.00 0.00 3.02
2998 4916 1.145571 TGTGTAAGGGGGCTTTGAGT 58.854 50.000 0.00 0.00 0.00 3.41
2999 4917 1.497286 TGTGTAAGGGGGCTTTGAGTT 59.503 47.619 0.00 0.00 0.00 3.01
3000 4918 2.160205 GTGTAAGGGGGCTTTGAGTTC 58.840 52.381 0.00 0.00 0.00 3.01
3001 4919 1.777878 TGTAAGGGGGCTTTGAGTTCA 59.222 47.619 0.00 0.00 0.00 3.18
3002 4920 2.160205 GTAAGGGGGCTTTGAGTTCAC 58.840 52.381 0.00 0.00 0.00 3.18
3003 4921 0.178961 AAGGGGGCTTTGAGTTCACC 60.179 55.000 0.00 0.00 0.00 4.02
3004 4922 1.606601 GGGGGCTTTGAGTTCACCC 60.607 63.158 0.00 0.00 40.05 4.61
3005 4923 1.152830 GGGGCTTTGAGTTCACCCA 59.847 57.895 8.15 0.00 42.76 4.51
3006 4924 0.251787 GGGGCTTTGAGTTCACCCAT 60.252 55.000 8.15 0.00 42.76 4.00
3007 4925 1.177401 GGGCTTTGAGTTCACCCATC 58.823 55.000 0.00 0.00 40.52 3.51
3092 5010 9.647918 TCTCATCTAACAGTAGGTGATAAAGAT 57.352 33.333 0.00 0.00 44.70 2.40
3254 5178 0.655208 TAGTTGCATTATGTGGCGCG 59.345 50.000 0.00 0.00 0.00 6.86
3352 5294 9.290988 CTTGAGTAAGGCTCTATATGTCTCTTA 57.709 37.037 0.00 0.00 44.41 2.10
3464 5407 7.232118 AGTCCAGTAATTTCAAAATTGAGGG 57.768 36.000 10.27 8.49 38.90 4.30
3468 5411 8.709308 TCCAGTAATTTCAAAATTGAGGGAAAA 58.291 29.630 10.27 0.00 38.90 2.29
3522 5465 2.081462 GATGTAAACCGGGTCCAGTTG 58.919 52.381 6.32 0.00 0.00 3.16
3524 5467 0.607217 GTAAACCGGGTCCAGTTGGG 60.607 60.000 6.32 0.00 35.41 4.12
3576 5519 6.049790 AGGGAAAATGAACTATCGAGCTAAC 58.950 40.000 0.00 0.00 0.00 2.34
3579 5522 7.709613 GGGAAAATGAACTATCGAGCTAACTAA 59.290 37.037 0.00 0.00 0.00 2.24
3598 5541 4.768968 ACTAAAGCTGACTAAACGGGACTA 59.231 41.667 0.00 0.00 0.00 2.59
3601 5544 1.798079 GCTGACTAAACGGGACTAGCG 60.798 57.143 0.00 0.00 0.00 4.26
3604 5547 0.613012 ACTAAACGGGACTAGCGGGT 60.613 55.000 0.00 0.00 0.00 5.28
3632 5575 6.514376 CGTTTATTGGCCATTTACATCCCTAC 60.514 42.308 6.09 0.00 0.00 3.18
3638 5581 4.141482 GGCCATTTACATCCCTACTTGAGA 60.141 45.833 0.00 0.00 0.00 3.27
3796 5739 4.755123 TGCTAGATCGTCGATGTATTCAGA 59.245 41.667 13.54 0.00 0.00 3.27
3798 5741 6.072452 TGCTAGATCGTCGATGTATTCAGATT 60.072 38.462 13.54 0.00 0.00 2.40
3928 5871 2.804933 GCTGGAGCTATGTAAGTCTGCC 60.805 54.545 0.00 0.00 38.21 4.85
4019 5963 9.095700 ACTTCCTTTTGGCCAAATAGTTTTATA 57.904 29.630 30.78 12.13 40.12 0.98
4147 6091 9.778741 TTGGTAGAATAGCCAGTAAAATATCAG 57.221 33.333 0.00 0.00 38.57 2.90
4148 6092 8.934697 TGGTAGAATAGCCAGTAAAATATCAGT 58.065 33.333 0.00 0.00 38.57 3.41
4215 6333 8.719596 TGGGATTTGAACCTTTATGCTAGTATA 58.280 33.333 0.00 0.00 0.00 1.47
4259 6383 7.816995 CCTGTATGTTAATTAGGAGAGCTCATC 59.183 40.741 17.77 10.33 0.00 2.92
4289 6413 6.139679 TGTAGGACCAAAAGAGGAAATGAT 57.860 37.500 0.00 0.00 0.00 2.45
4324 6448 0.382873 TGCTTGTGCAGTTCTGCTTG 59.617 50.000 22.44 12.22 45.31 4.01
4332 6456 3.004106 GTGCAGTTCTGCTTGTTGAGATT 59.996 43.478 22.44 0.00 35.49 2.40
4344 6468 5.506317 GCTTGTTGAGATTGCAAGTGTTACT 60.506 40.000 4.94 0.00 40.99 2.24
4383 6507 4.558697 GCTTTATTTCTTTCTTGGCGTGGT 60.559 41.667 0.00 0.00 0.00 4.16
4473 6597 0.745845 GGTATGTGCTGGGAGCTGTG 60.746 60.000 0.00 0.00 42.97 3.66
4551 6675 6.846350 ACTATTAGCTCAAAACAATGCAGTC 58.154 36.000 0.00 0.00 0.00 3.51
4666 6795 5.477607 TTAATCGAGAAAACCCTCTCACA 57.522 39.130 0.00 0.00 41.75 3.58
4667 6796 4.351874 AATCGAGAAAACCCTCTCACAA 57.648 40.909 0.00 0.00 41.75 3.33
4684 6813 7.914346 CCTCTCACAATTTTCTGAAATGATAGC 59.086 37.037 9.94 0.00 35.69 2.97
4685 6814 8.339344 TCTCACAATTTTCTGAAATGATAGCA 57.661 30.769 9.94 0.00 35.69 3.49
4690 6819 8.038944 ACAATTTTCTGAAATGATAGCATTGCT 58.961 29.630 16.63 16.63 43.71 3.91
4810 6939 2.037251 GCAGAGAAGGTTACAGTGGTCA 59.963 50.000 0.00 0.00 0.00 4.02
4813 6942 4.692625 CAGAGAAGGTTACAGTGGTCAATG 59.307 45.833 0.00 0.00 0.00 2.82
4831 6960 0.676466 TGGTACAGCAAATGGAGGCG 60.676 55.000 0.00 0.00 34.54 5.52
5046 7175 4.997395 TCTCCAAGTAAGTAGCTTTGCTTG 59.003 41.667 17.33 17.33 40.44 4.01
5052 7181 6.246420 AGTAAGTAGCTTTGCTTGTGATTG 57.754 37.500 0.00 0.00 40.44 2.67
5056 7185 3.088194 AGCTTTGCTTGTGATTGTGTG 57.912 42.857 0.00 0.00 33.89 3.82
5193 7331 2.024941 GGAGTTCCTGATCCAAATGGGT 60.025 50.000 0.00 0.00 38.11 4.51
5218 7356 8.175716 GTCTATATATTGGGATTTTAAGTGCGC 58.824 37.037 0.00 0.00 0.00 6.09
5273 7416 5.477984 TCCAGTTTGCTAATTCTCATGCTTT 59.522 36.000 0.00 0.00 0.00 3.51
5311 7454 6.292381 GCTATTTAGTGTTCACCTGCTAATCG 60.292 42.308 0.00 0.00 0.00 3.34
5333 7476 4.556501 CGGTTTGCTATTTGTCTTTCAGCA 60.557 41.667 0.00 0.00 40.31 4.41
5530 7673 2.829120 AGAGCTTCTAACTGACAGGTCC 59.171 50.000 7.51 0.00 34.24 4.46
5580 7723 6.850752 TCTGGATGTTGATAGTGTGTTAGA 57.149 37.500 0.00 0.00 0.00 2.10
5594 7745 5.047021 AGTGTGTTAGATATGCTGTGACAGT 60.047 40.000 14.82 0.00 33.43 3.55
5639 7790 7.646548 TCTCCGATTTGAGATTTAAGAGAGA 57.353 36.000 0.00 0.00 36.48 3.10
5641 7792 6.276847 TCCGATTTGAGATTTAAGAGAGAGC 58.723 40.000 0.00 0.00 0.00 4.09
5724 7883 1.202222 CGCTGAAAGATGGCATGAACC 60.202 52.381 3.81 0.00 34.07 3.62
5804 7963 1.431243 TGTGGCTAAAGGTGGGGAATT 59.569 47.619 0.00 0.00 0.00 2.17
5829 7988 4.142026 TGACACTTCCCATACTCGTAATGG 60.142 45.833 6.49 6.49 35.31 3.16
5915 8074 7.750229 ACCTGCAAATGTACTGAATATATGG 57.250 36.000 0.00 0.00 0.00 2.74
5948 8107 7.148590 GGAAGCATTGAATCAAAACCAATGTAC 60.149 37.037 0.00 0.00 45.22 2.90
6012 8180 9.643693 ACTGCTTGAAACCAATATGAAAAATAG 57.356 29.630 0.00 0.00 0.00 1.73
6014 8182 8.040132 TGCTTGAAACCAATATGAAAAATAGGG 58.960 33.333 0.00 0.00 0.00 3.53
6133 8301 7.900782 TCTTGGATTGCTGTAAGTTAGTAAC 57.099 36.000 4.78 4.78 35.30 2.50
6139 8307 7.277319 GGATTGCTGTAAGTTAGTAACACTACC 59.723 40.741 15.28 5.57 35.30 3.18
6150 8318 8.850156 AGTTAGTAACACTACCTTTTTCTCGTA 58.150 33.333 15.28 0.00 28.93 3.43
6163 8331 6.018669 CCTTTTTCTCGTATATTCAGCTCACC 60.019 42.308 0.00 0.00 0.00 4.02
6170 8338 5.462068 TCGTATATTCAGCTCACCGATTTTG 59.538 40.000 0.00 0.00 0.00 2.44
6198 8366 2.234908 CAGGCTCCTAACAGCTACAGTT 59.765 50.000 0.00 0.00 39.58 3.16
6468 8636 4.144297 TGTTTTTCCTTCTGTGCTATGCT 58.856 39.130 0.00 0.00 0.00 3.79
6603 8771 9.836179 ATTGGTATGCTTCCCCATTTTAATATA 57.164 29.630 0.00 0.00 0.00 0.86
6642 8810 7.786118 CGCATGTTATAACACGTATACAGAAAC 59.214 37.037 20.26 0.00 42.51 2.78
6739 8907 1.270550 CTTGTTGTGGTCAAGGGATGC 59.729 52.381 0.00 0.00 38.70 3.91
6778 8946 5.550232 TTACATGCATTACAGCTCTTGTG 57.450 39.130 0.00 0.00 41.10 3.33
6785 8953 6.227522 TGCATTACAGCTCTTGTGTACTTTA 58.772 36.000 0.00 0.00 41.10 1.85
7143 9313 3.765511 ACCATATGTCTGTTGCAGCAAAT 59.234 39.130 10.11 1.67 0.00 2.32
7191 9361 3.692257 ATTCCTCTCATATTCTGCCGG 57.308 47.619 0.00 0.00 0.00 6.13
7313 9483 7.694367 CGTCTCTATAATTGATGGTGACTATCG 59.306 40.741 4.47 0.00 37.38 2.92
7368 9538 5.613358 GGCAACTAAGCGCTTATATTGAT 57.387 39.130 35.41 19.05 34.64 2.57
7398 9568 0.321653 GTGAGGGTGTTGCGGAGATT 60.322 55.000 0.00 0.00 0.00 2.40
7401 9571 3.035363 TGAGGGTGTTGCGGAGATTATA 58.965 45.455 0.00 0.00 0.00 0.98
7413 9583 3.243724 GGAGATTATAGTGGCACCCTCT 58.756 50.000 15.27 9.17 0.00 3.69
7660 9830 1.878088 TCGACCTATACTGGATCGTGC 59.122 52.381 0.00 0.00 34.61 5.34
7904 10083 5.233225 TGATGACACTCAAGAAGCTTACAG 58.767 41.667 0.00 0.00 0.00 2.74
7932 10111 5.615289 GCACAGAACAGAATCAGGGTATAT 58.385 41.667 0.00 0.00 0.00 0.86
7953 10132 9.077885 GTATATCTTTCAGAGATGAAGGAGACT 57.922 37.037 8.47 0.00 44.80 3.24
8358 10542 3.077359 GGGGATGTCTTCACAGAACAAG 58.923 50.000 0.00 0.00 35.41 3.16
8371 10559 3.623060 ACAGAACAAGGCGTGCATAATAG 59.377 43.478 0.00 0.00 0.00 1.73
8546 10739 6.626302 CAACCCTTTCTGTTGTTTTCTAACA 58.374 36.000 0.00 0.00 42.34 2.41
8607 10802 9.803315 GTTTTGTTTTTACTTTCTTGAGAGGAT 57.197 29.630 0.00 0.00 0.00 3.24
8731 10930 6.280643 TGTAAAAGGTACGATGATGGATCTG 58.719 40.000 0.00 0.00 0.00 2.90
8928 11559 2.900122 TCTCTAAAGCAAACGCATGC 57.100 45.000 7.91 7.91 46.78 4.06
8999 11630 4.074259 TGACATGAATTGGGTCAGAACTG 58.926 43.478 0.00 0.00 36.69 3.16
9064 11695 2.159198 CCATTCAAGTTGGCATAGGCAC 60.159 50.000 0.15 0.00 43.71 5.01
9101 11732 6.918892 ATTAATGCACGAGTAACATAGCAA 57.081 33.333 0.00 0.00 35.45 3.91
9102 11733 4.864916 AATGCACGAGTAACATAGCAAG 57.135 40.909 0.00 0.00 35.45 4.01
9103 11734 3.586100 TGCACGAGTAACATAGCAAGA 57.414 42.857 0.00 0.00 0.00 3.02
9104 11735 3.250744 TGCACGAGTAACATAGCAAGAC 58.749 45.455 0.00 0.00 0.00 3.01
9105 11736 2.603560 GCACGAGTAACATAGCAAGACC 59.396 50.000 0.00 0.00 0.00 3.85
9106 11737 3.676324 GCACGAGTAACATAGCAAGACCT 60.676 47.826 0.00 0.00 0.00 3.85
9107 11738 4.439700 GCACGAGTAACATAGCAAGACCTA 60.440 45.833 0.00 0.00 0.00 3.08
9108 11739 5.647589 CACGAGTAACATAGCAAGACCTAA 58.352 41.667 0.00 0.00 0.00 2.69
9109 11740 6.097356 CACGAGTAACATAGCAAGACCTAAA 58.903 40.000 0.00 0.00 0.00 1.85
9110 11741 6.034683 CACGAGTAACATAGCAAGACCTAAAC 59.965 42.308 0.00 0.00 0.00 2.01
9111 11742 6.071503 ACGAGTAACATAGCAAGACCTAAACT 60.072 38.462 0.00 0.00 0.00 2.66
9112 11743 6.472808 CGAGTAACATAGCAAGACCTAAACTC 59.527 42.308 0.00 0.00 0.00 3.01
9113 11744 7.241042 AGTAACATAGCAAGACCTAAACTCA 57.759 36.000 0.00 0.00 0.00 3.41
9114 11745 7.324178 AGTAACATAGCAAGACCTAAACTCAG 58.676 38.462 0.00 0.00 0.00 3.35
9115 11746 6.360370 AACATAGCAAGACCTAAACTCAGA 57.640 37.500 0.00 0.00 0.00 3.27
9116 11747 5.725362 ACATAGCAAGACCTAAACTCAGAC 58.275 41.667 0.00 0.00 0.00 3.51
9117 11748 5.482175 ACATAGCAAGACCTAAACTCAGACT 59.518 40.000 0.00 0.00 0.00 3.24
9118 11749 6.663953 ACATAGCAAGACCTAAACTCAGACTA 59.336 38.462 0.00 0.00 0.00 2.59
9119 11750 5.652994 AGCAAGACCTAAACTCAGACTAG 57.347 43.478 0.00 0.00 0.00 2.57
9120 11751 4.081917 AGCAAGACCTAAACTCAGACTAGC 60.082 45.833 0.00 0.00 0.00 3.42
9121 11752 4.749976 CAAGACCTAAACTCAGACTAGCC 58.250 47.826 0.00 0.00 0.00 3.93
9122 11753 4.325084 AGACCTAAACTCAGACTAGCCT 57.675 45.455 0.00 0.00 0.00 4.58
9123 11754 5.453866 AGACCTAAACTCAGACTAGCCTA 57.546 43.478 0.00 0.00 0.00 3.93
9124 11755 5.828871 AGACCTAAACTCAGACTAGCCTAA 58.171 41.667 0.00 0.00 0.00 2.69
9125 11756 6.254522 AGACCTAAACTCAGACTAGCCTAAA 58.745 40.000 0.00 0.00 0.00 1.85
9126 11757 6.898521 AGACCTAAACTCAGACTAGCCTAAAT 59.101 38.462 0.00 0.00 0.00 1.40
9127 11758 7.068962 AGACCTAAACTCAGACTAGCCTAAATC 59.931 40.741 0.00 0.00 0.00 2.17
9128 11759 6.183360 ACCTAAACTCAGACTAGCCTAAATCG 60.183 42.308 0.00 0.00 0.00 3.34
9129 11760 5.916661 AAACTCAGACTAGCCTAAATCGA 57.083 39.130 0.00 0.00 0.00 3.59
9130 11761 6.472686 AAACTCAGACTAGCCTAAATCGAT 57.527 37.500 0.00 0.00 0.00 3.59
9131 11762 6.472686 AACTCAGACTAGCCTAAATCGATT 57.527 37.500 4.39 4.39 0.00 3.34
9132 11763 7.584122 AACTCAGACTAGCCTAAATCGATTA 57.416 36.000 11.83 0.00 0.00 1.75
9133 11764 7.584122 ACTCAGACTAGCCTAAATCGATTAA 57.416 36.000 11.83 0.00 0.00 1.40
9134 11765 8.008513 ACTCAGACTAGCCTAAATCGATTAAA 57.991 34.615 11.83 1.96 0.00 1.52
9135 11766 7.921745 ACTCAGACTAGCCTAAATCGATTAAAC 59.078 37.037 11.83 1.81 0.00 2.01
9136 11767 7.208080 TCAGACTAGCCTAAATCGATTAAACC 58.792 38.462 11.83 1.10 0.00 3.27
9137 11768 6.984474 CAGACTAGCCTAAATCGATTAAACCA 59.016 38.462 11.83 0.00 0.00 3.67
9138 11769 7.494625 CAGACTAGCCTAAATCGATTAAACCAA 59.505 37.037 11.83 0.00 0.00 3.67
9139 11770 8.211629 AGACTAGCCTAAATCGATTAAACCAAT 58.788 33.333 11.83 0.00 0.00 3.16
9140 11771 8.379457 ACTAGCCTAAATCGATTAAACCAATC 57.621 34.615 11.83 0.00 39.84 2.67
9141 11772 8.211629 ACTAGCCTAAATCGATTAAACCAATCT 58.788 33.333 11.83 3.97 40.89 2.40
9142 11773 7.264373 AGCCTAAATCGATTAAACCAATCTG 57.736 36.000 11.83 0.00 40.89 2.90
9143 11774 6.828785 AGCCTAAATCGATTAAACCAATCTGT 59.171 34.615 11.83 0.00 40.89 3.41
9144 11775 7.339466 AGCCTAAATCGATTAAACCAATCTGTT 59.661 33.333 11.83 0.00 40.89 3.16
9145 11776 8.617809 GCCTAAATCGATTAAACCAATCTGTTA 58.382 33.333 11.83 0.00 40.89 2.41
9146 11777 9.931210 CCTAAATCGATTAAACCAATCTGTTAC 57.069 33.333 11.83 0.00 40.89 2.50
9157 11788 8.880878 AAACCAATCTGTTACAAAATTACCAC 57.119 30.769 0.00 0.00 0.00 4.16
9158 11789 7.589958 ACCAATCTGTTACAAAATTACCACA 57.410 32.000 0.00 0.00 0.00 4.17
9159 11790 8.012957 ACCAATCTGTTACAAAATTACCACAA 57.987 30.769 0.00 0.00 0.00 3.33
9160 11791 8.141268 ACCAATCTGTTACAAAATTACCACAAG 58.859 33.333 0.00 0.00 0.00 3.16
9161 11792 7.116233 CCAATCTGTTACAAAATTACCACAAGC 59.884 37.037 0.00 0.00 0.00 4.01
9162 11793 6.701145 TCTGTTACAAAATTACCACAAGCA 57.299 33.333 0.00 0.00 0.00 3.91
9163 11794 7.283625 TCTGTTACAAAATTACCACAAGCAT 57.716 32.000 0.00 0.00 0.00 3.79
9164 11795 7.144661 TCTGTTACAAAATTACCACAAGCATG 58.855 34.615 0.00 0.00 0.00 4.06
9165 11796 7.013750 TCTGTTACAAAATTACCACAAGCATGA 59.986 33.333 0.00 0.00 0.00 3.07
9166 11797 6.920758 TGTTACAAAATTACCACAAGCATGAC 59.079 34.615 0.00 0.00 0.00 3.06
9167 11798 5.789643 ACAAAATTACCACAAGCATGACT 57.210 34.783 0.00 0.00 0.00 3.41
9168 11799 6.892658 ACAAAATTACCACAAGCATGACTA 57.107 33.333 0.00 0.00 0.00 2.59
9169 11800 7.466746 ACAAAATTACCACAAGCATGACTAT 57.533 32.000 0.00 0.00 0.00 2.12
9170 11801 8.574251 ACAAAATTACCACAAGCATGACTATA 57.426 30.769 0.00 0.00 0.00 1.31
9171 11802 9.189156 ACAAAATTACCACAAGCATGACTATAT 57.811 29.630 0.00 0.00 0.00 0.86
9216 11847 9.448438 AGCATGTCTATACTCAAATTAAACACA 57.552 29.630 0.00 0.00 0.00 3.72
9225 11856 7.617533 ACTCAAATTAAACACATTAACGTGC 57.382 32.000 0.72 0.00 40.73 5.34
9226 11857 6.358558 ACTCAAATTAAACACATTAACGTGCG 59.641 34.615 0.72 0.00 40.73 5.34
9227 11858 5.625721 TCAAATTAAACACATTAACGTGCGG 59.374 36.000 0.72 0.00 40.73 5.69
9228 11859 3.539431 TTAAACACATTAACGTGCGGG 57.461 42.857 0.72 0.00 40.73 6.13
9229 11860 1.595466 AAACACATTAACGTGCGGGA 58.405 45.000 0.72 0.00 40.73 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
149 152 2.105821 CCTAACCACACAGAAGAACCCA 59.894 50.000 0.00 0.00 0.00 4.51
159 162 0.840617 TCAGCAACCCTAACCACACA 59.159 50.000 0.00 0.00 0.00 3.72
192 195 1.453155 GTCACCACAACCATGGCTAG 58.547 55.000 13.04 4.20 44.33 3.42
193 196 0.321210 CGTCACCACAACCATGGCTA 60.321 55.000 13.04 0.00 44.33 3.93
228 1114 2.046314 GCCTTGCCGCCTGACTAA 60.046 61.111 0.00 0.00 0.00 2.24
252 1330 5.859495 ACACTATTTTAGCTCTAGGATGCC 58.141 41.667 0.00 0.00 0.00 4.40
265 1343 1.472026 GGCGGCGAGGACACTATTTTA 60.472 52.381 12.98 0.00 0.00 1.52
292 1370 2.158841 GCTAGACGCAAAACCGAAATGA 59.841 45.455 0.00 0.00 38.92 2.57
297 1375 3.850923 CGCTAGACGCAAAACCGA 58.149 55.556 0.00 0.00 39.08 4.69
324 1402 1.399744 AAGAGACACCTCCACGTGCA 61.400 55.000 10.91 0.00 40.30 4.57
328 1845 0.319900 CCACAAGAGACACCTCCACG 60.320 60.000 0.00 0.00 40.30 4.94
343 1860 2.108075 ACATGACCCAATCAAGTCCACA 59.892 45.455 0.00 0.00 41.93 4.17
349 1866 3.287867 AGCCTACATGACCCAATCAAG 57.712 47.619 0.00 0.00 41.93 3.02
365 1882 0.832135 TCCGTCAGAGACCAAAGCCT 60.832 55.000 0.00 0.00 0.00 4.58
367 1884 1.338200 ACATCCGTCAGAGACCAAAGC 60.338 52.381 0.00 0.00 0.00 3.51
378 1895 0.107703 GGATCCAAGCACATCCGTCA 60.108 55.000 6.95 0.00 29.40 4.35
382 1899 1.605710 CGATTGGATCCAAGCACATCC 59.394 52.381 35.01 16.04 41.81 3.51
386 1903 1.737838 TGACGATTGGATCCAAGCAC 58.262 50.000 35.01 28.00 41.81 4.40
389 1906 5.061853 AGATCAATGACGATTGGATCCAAG 58.938 41.667 29.98 20.40 39.68 3.61
403 1920 3.805207 CACATCTGCCTGAGATCAATGA 58.195 45.455 0.00 0.00 39.64 2.57
405 1922 2.172930 AGCACATCTGCCTGAGATCAAT 59.827 45.455 0.00 0.00 45.53 2.57
422 1939 1.156645 CGCTAGCCAGATCCAAGCAC 61.157 60.000 9.66 0.00 32.69 4.40
423 1940 1.144716 CGCTAGCCAGATCCAAGCA 59.855 57.895 9.66 0.00 32.69 3.91
425 1942 0.179062 AAGCGCTAGCCAGATCCAAG 60.179 55.000 12.05 0.00 46.67 3.61
426 1943 0.462581 CAAGCGCTAGCCAGATCCAA 60.463 55.000 12.05 0.00 46.67 3.53
432 1949 3.503363 GCCACAAGCGCTAGCCAG 61.503 66.667 12.05 0.00 46.67 4.85
437 1954 3.047280 CAACGGCCACAAGCGCTA 61.047 61.111 12.05 0.00 45.17 4.26
484 2057 1.477105 GCTGGCAAAGACAAAACGTC 58.523 50.000 0.00 0.00 45.77 4.34
496 2071 1.227999 GCACTAGTTGTCGCTGGCAA 61.228 55.000 0.00 0.00 0.00 4.52
499 2074 0.244994 AGAGCACTAGTTGTCGCTGG 59.755 55.000 9.95 0.00 34.74 4.85
511 2087 0.523966 GACTAGTGTCGCAGAGCACT 59.476 55.000 0.00 0.00 45.51 4.40
520 2096 1.546961 ACCTTGGAGGACTAGTGTCG 58.453 55.000 0.00 0.00 43.79 4.35
522 2098 3.261137 GCTAAACCTTGGAGGACTAGTGT 59.739 47.826 0.00 0.00 37.67 3.55
524 2100 3.517612 TGCTAAACCTTGGAGGACTAGT 58.482 45.455 0.00 0.00 37.67 2.57
527 2103 5.191722 TCATTATGCTAAACCTTGGAGGACT 59.808 40.000 0.07 0.00 37.67 3.85
539 2115 7.284261 TGACATTCGGGAAATCATTATGCTAAA 59.716 33.333 0.00 0.00 0.00 1.85
546 2122 5.257262 TGGTTGACATTCGGGAAATCATTA 58.743 37.500 1.13 0.00 0.00 1.90
547 2123 4.085733 TGGTTGACATTCGGGAAATCATT 58.914 39.130 1.13 0.00 0.00 2.57
549 2125 3.147553 TGGTTGACATTCGGGAAATCA 57.852 42.857 0.00 0.00 0.00 2.57
592 2171 1.109920 CATCATCGTCCCTCCCTCGT 61.110 60.000 0.00 0.00 0.00 4.18
594 2173 2.053618 CCATCATCGTCCCTCCCTC 58.946 63.158 0.00 0.00 0.00 4.30
619 2202 3.014085 ATCGGTGCGGGTCGAATGT 62.014 57.895 0.00 0.00 38.92 2.71
714 2300 0.393267 TTATTTTGGGACGGGCGGAG 60.393 55.000 0.00 0.00 0.00 4.63
715 2301 0.393267 CTTATTTTGGGACGGGCGGA 60.393 55.000 0.00 0.00 0.00 5.54
716 2302 0.678684 ACTTATTTTGGGACGGGCGG 60.679 55.000 0.00 0.00 0.00 6.13
717 2303 0.450184 CACTTATTTTGGGACGGGCG 59.550 55.000 0.00 0.00 0.00 6.13
718 2304 1.471287 GTCACTTATTTTGGGACGGGC 59.529 52.381 0.00 0.00 0.00 6.13
719 2305 3.007635 GAGTCACTTATTTTGGGACGGG 58.992 50.000 0.00 0.00 33.84 5.28
720 2306 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
721 2307 4.755123 AGTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
722 2308 6.635030 AAGTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
723 2309 8.160765 TGATAAGTTGAGTCACTTATTTTGGGA 58.839 33.333 19.85 3.00 45.90 4.37
724 2310 8.335532 TGATAAGTTGAGTCACTTATTTTGGG 57.664 34.615 19.85 0.00 45.90 4.12
732 2318 9.823647 CACCTAATATGATAAGTTGAGTCACTT 57.176 33.333 11.17 11.17 40.28 3.16
733 2319 8.424918 CCACCTAATATGATAAGTTGAGTCACT 58.575 37.037 0.00 0.00 0.00 3.41
734 2320 7.657761 CCCACCTAATATGATAAGTTGAGTCAC 59.342 40.741 0.00 0.00 0.00 3.67
735 2321 7.567250 TCCCACCTAATATGATAAGTTGAGTCA 59.433 37.037 0.00 0.00 0.00 3.41
736 2322 7.963532 TCCCACCTAATATGATAAGTTGAGTC 58.036 38.462 0.00 0.00 0.00 3.36
737 2323 7.016661 CCTCCCACCTAATATGATAAGTTGAGT 59.983 40.741 0.00 0.00 0.00 3.41
738 2324 7.235606 TCCTCCCACCTAATATGATAAGTTGAG 59.764 40.741 0.00 0.00 0.00 3.02
739 2325 7.079700 TCCTCCCACCTAATATGATAAGTTGA 58.920 38.462 0.00 0.00 0.00 3.18
740 2326 7.316393 TCCTCCCACCTAATATGATAAGTTG 57.684 40.000 0.00 0.00 0.00 3.16
741 2327 8.525729 AATCCTCCCACCTAATATGATAAGTT 57.474 34.615 0.00 0.00 0.00 2.66
742 2328 8.525729 AAATCCTCCCACCTAATATGATAAGT 57.474 34.615 0.00 0.00 0.00 2.24
743 2329 9.813826 AAAAATCCTCCCACCTAATATGATAAG 57.186 33.333 0.00 0.00 0.00 1.73
842 2447 7.376435 TGCAACTGAAATTTGATTCGATCTA 57.624 32.000 0.00 0.00 31.80 1.98
975 2591 1.037493 TGGGATCGATTTCGGATCGT 58.963 50.000 17.40 8.56 41.77 3.73
986 2602 2.821685 CCATCGCCTTGGGATCGA 59.178 61.111 0.00 0.00 32.93 3.59
993 2615 2.515523 CTGCTCCCCATCGCCTTG 60.516 66.667 0.00 0.00 0.00 3.61
1046 2764 3.519930 GGTCCTCCTCCTCGTCGC 61.520 72.222 0.00 0.00 0.00 5.19
1050 2879 4.444081 ACCGGGTCCTCCTCCTCG 62.444 72.222 6.32 0.00 0.00 4.63
1072 2901 2.819117 TAACTCTGCTGCGACGCCTG 62.819 60.000 18.69 11.39 0.00 4.85
1115 2944 4.873129 CCATCTGGACGACGGCGG 62.873 72.222 18.49 0.00 43.17 6.13
1173 3002 0.838554 TCCAACCGAATCACCTGGGA 60.839 55.000 0.00 0.00 0.00 4.37
1217 3046 2.104963 ACCCAGAAGACAGAACAGGAAC 59.895 50.000 0.00 0.00 0.00 3.62
1221 3050 1.517242 GCACCCAGAAGACAGAACAG 58.483 55.000 0.00 0.00 0.00 3.16
1222 3051 0.108585 GGCACCCAGAAGACAGAACA 59.891 55.000 0.00 0.00 0.00 3.18
1223 3052 0.951040 CGGCACCCAGAAGACAGAAC 60.951 60.000 0.00 0.00 0.00 3.01
1225 3054 1.407656 AACGGCACCCAGAAGACAGA 61.408 55.000 0.00 0.00 0.00 3.41
1226 3055 0.951040 GAACGGCACCCAGAAGACAG 60.951 60.000 0.00 0.00 0.00 3.51
1227 3056 1.070786 GAACGGCACCCAGAAGACA 59.929 57.895 0.00 0.00 0.00 3.41
1228 3057 2.027625 CGAACGGCACCCAGAAGAC 61.028 63.158 0.00 0.00 0.00 3.01
1229 3058 2.342279 CGAACGGCACCCAGAAGA 59.658 61.111 0.00 0.00 0.00 2.87
1230 3059 2.027625 GACGAACGGCACCCAGAAG 61.028 63.158 0.00 0.00 0.00 2.85
1231 3060 2.029964 GACGAACGGCACCCAGAA 59.970 61.111 0.00 0.00 0.00 3.02
1232 3061 2.504274 AAGACGAACGGCACCCAGA 61.504 57.895 2.25 0.00 0.00 3.86
1233 3062 2.030562 AAGACGAACGGCACCCAG 59.969 61.111 2.25 0.00 0.00 4.45
1234 3063 2.280524 CAAGACGAACGGCACCCA 60.281 61.111 2.25 0.00 0.00 4.51
1235 3064 2.280592 ACAAGACGAACGGCACCC 60.281 61.111 2.25 0.00 0.00 4.61
1236 3065 2.935955 CACAAGACGAACGGCACC 59.064 61.111 2.25 0.00 0.00 5.01
1237 3066 2.248431 GCACAAGACGAACGGCAC 59.752 61.111 2.25 0.00 0.00 5.01
1238 3067 2.202946 TGCACAAGACGAACGGCA 60.203 55.556 2.25 0.00 0.00 5.69
1239 3068 2.244651 ACTGCACAAGACGAACGGC 61.245 57.895 0.00 0.00 0.00 5.68
1240 3069 1.564622 CACTGCACAAGACGAACGG 59.435 57.895 0.00 0.00 0.00 4.44
1241 3070 1.083401 GCACTGCACAAGACGAACG 60.083 57.895 0.00 0.00 0.00 3.95
1242 3071 0.588252 ATGCACTGCACAAGACGAAC 59.412 50.000 5.67 0.00 43.04 3.95
1243 3072 0.867746 GATGCACTGCACAAGACGAA 59.132 50.000 5.67 0.00 43.04 3.85
1244 3073 0.950555 GGATGCACTGCACAAGACGA 60.951 55.000 5.67 0.00 43.04 4.20
1245 3074 1.499056 GGATGCACTGCACAAGACG 59.501 57.895 5.67 0.00 43.04 4.18
1249 3078 2.672651 CCCGGATGCACTGCACAA 60.673 61.111 5.67 0.00 43.04 3.33
1262 3091 2.515901 CAATAAGCCCCTCCCCGG 59.484 66.667 0.00 0.00 0.00 5.73
1263 3092 2.203351 GCAATAAGCCCCTCCCCG 60.203 66.667 0.00 0.00 37.23 5.73
1266 3095 3.279875 CGCGCAATAAGCCCCTCC 61.280 66.667 8.75 0.00 41.38 4.30
1267 3096 3.279875 CCGCGCAATAAGCCCCTC 61.280 66.667 8.75 0.00 41.38 4.30
1268 3097 3.120086 ATCCGCGCAATAAGCCCCT 62.120 57.895 8.75 0.00 41.38 4.79
1269 3098 2.594592 ATCCGCGCAATAAGCCCC 60.595 61.111 8.75 0.00 41.38 5.80
1271 3100 0.166814 GATGATCCGCGCAATAAGCC 59.833 55.000 8.75 0.00 41.38 4.35
1272 3101 0.179240 CGATGATCCGCGCAATAAGC 60.179 55.000 8.75 0.00 40.87 3.09
1273 3102 3.935133 CGATGATCCGCGCAATAAG 57.065 52.632 8.75 0.00 0.00 1.73
1288 3117 5.871524 ACGAAGATATTATCAGCAATGCGAT 59.128 36.000 14.58 14.58 0.00 4.58
1303 3132 4.645136 TCCTGACTACTGCAACGAAGATAT 59.355 41.667 0.00 0.00 0.00 1.63
1325 3154 3.336138 AGGAACCCAGAGTTTTCGATC 57.664 47.619 0.00 0.00 39.40 3.69
1333 3162 2.716424 TCCAATCAAAGGAACCCAGAGT 59.284 45.455 0.00 0.00 30.71 3.24
1335 3164 3.397618 TCTTCCAATCAAAGGAACCCAGA 59.602 43.478 0.00 0.00 40.11 3.86
1336 3165 3.766545 TCTTCCAATCAAAGGAACCCAG 58.233 45.455 0.00 0.00 40.11 4.45
1339 3168 4.082026 CACCATCTTCCAATCAAAGGAACC 60.082 45.833 0.00 0.00 40.11 3.62
1341 3170 4.088634 CCACCATCTTCCAATCAAAGGAA 58.911 43.478 0.00 0.00 42.62 3.36
1342 3171 3.075882 ACCACCATCTTCCAATCAAAGGA 59.924 43.478 0.00 0.00 0.00 3.36
1344 3173 4.523943 TGAACCACCATCTTCCAATCAAAG 59.476 41.667 0.00 0.00 0.00 2.77
1345 3174 4.478203 TGAACCACCATCTTCCAATCAAA 58.522 39.130 0.00 0.00 0.00 2.69
1346 3175 4.111255 TGAACCACCATCTTCCAATCAA 57.889 40.909 0.00 0.00 0.00 2.57
1347 3176 3.805066 TGAACCACCATCTTCCAATCA 57.195 42.857 0.00 0.00 0.00 2.57
1348 3177 5.665916 ATTTGAACCACCATCTTCCAATC 57.334 39.130 0.00 0.00 0.00 2.67
1349 3178 6.232692 CAAATTTGAACCACCATCTTCCAAT 58.767 36.000 13.08 0.00 0.00 3.16
1350 3179 5.454471 CCAAATTTGAACCACCATCTTCCAA 60.454 40.000 19.86 0.00 0.00 3.53
1351 3180 4.040217 CCAAATTTGAACCACCATCTTCCA 59.960 41.667 19.86 0.00 0.00 3.53
1352 3181 4.283212 TCCAAATTTGAACCACCATCTTCC 59.717 41.667 19.86 0.00 0.00 3.46
1353 3182 5.221422 TGTCCAAATTTGAACCACCATCTTC 60.221 40.000 19.86 0.00 0.00 2.87
1354 3183 4.653341 TGTCCAAATTTGAACCACCATCTT 59.347 37.500 19.86 0.00 0.00 2.40
1355 3184 4.222336 TGTCCAAATTTGAACCACCATCT 58.778 39.130 19.86 0.00 0.00 2.90
1356 3185 4.599047 TGTCCAAATTTGAACCACCATC 57.401 40.909 19.86 0.53 0.00 3.51
1357 3186 5.365021 TTTGTCCAAATTTGAACCACCAT 57.635 34.783 19.86 0.00 0.00 3.55
1358 3187 4.826274 TTTGTCCAAATTTGAACCACCA 57.174 36.364 19.86 3.97 0.00 4.17
1388 3217 6.346758 CGCGTACCAAAATAAACACTCTACAA 60.347 38.462 0.00 0.00 0.00 2.41
1391 3242 5.229423 ACGCGTACCAAAATAAACACTCTA 58.771 37.500 11.67 0.00 0.00 2.43
1394 3245 4.990426 AGTACGCGTACCAAAATAAACACT 59.010 37.500 38.10 19.36 36.75 3.55
1425 3276 7.940688 TCATGGCATCATCAAGTCTTACAATAT 59.059 33.333 0.00 0.00 0.00 1.28
1426 3277 7.281841 TCATGGCATCATCAAGTCTTACAATA 58.718 34.615 0.00 0.00 0.00 1.90
1427 3278 6.124340 TCATGGCATCATCAAGTCTTACAAT 58.876 36.000 0.00 0.00 0.00 2.71
1428 3279 5.499313 TCATGGCATCATCAAGTCTTACAA 58.501 37.500 0.00 0.00 0.00 2.41
1429 3280 5.101648 TCATGGCATCATCAAGTCTTACA 57.898 39.130 0.00 0.00 0.00 2.41
1430 3281 6.485984 AGATTCATGGCATCATCAAGTCTTAC 59.514 38.462 15.36 0.00 0.00 2.34
1431 3282 6.598503 AGATTCATGGCATCATCAAGTCTTA 58.401 36.000 15.36 0.00 0.00 2.10
1440 3291 8.651589 AATTATCTGAAGATTCATGGCATCAT 57.348 30.769 0.00 0.00 36.46 2.45
1444 3295 9.358406 ACATTAATTATCTGAAGATTCATGGCA 57.642 29.630 0.00 0.00 36.46 4.92
1518 3370 7.040340 TCCGTTTTGAAATAAATCTACCAGCAA 60.040 33.333 0.00 0.00 0.00 3.91
1521 3373 8.673711 TCATCCGTTTTGAAATAAATCTACCAG 58.326 33.333 0.00 0.00 0.00 4.00
1535 3387 6.266168 ACAATAGCAATTCATCCGTTTTGA 57.734 33.333 0.00 0.00 0.00 2.69
1537 3389 5.348451 GCAACAATAGCAATTCATCCGTTTT 59.652 36.000 0.00 0.00 0.00 2.43
1542 3394 5.899299 AGAAGCAACAATAGCAATTCATCC 58.101 37.500 0.00 0.00 0.00 3.51
1557 3409 6.371825 AGTGGCACTACTTAAATAGAAGCAAC 59.628 38.462 20.61 10.54 34.11 4.17
1559 3411 6.049955 AGTGGCACTACTTAAATAGAAGCA 57.950 37.500 20.61 1.14 32.28 3.91
1564 3416 5.123936 GGGGAAGTGGCACTACTTAAATAG 58.876 45.833 22.37 0.00 40.78 1.73
1570 3422 0.693049 CTGGGGAAGTGGCACTACTT 59.307 55.000 22.37 5.07 43.24 2.24
1573 3425 1.668826 ATTCTGGGGAAGTGGCACTA 58.331 50.000 22.37 3.42 34.70 2.74
1618 3519 4.333926 GCTAGCATTTCCGATCAAGAAACT 59.666 41.667 10.63 6.76 36.13 2.66
1658 3559 9.872684 CAGGATTAATGGGCCTATAATATGAAT 57.127 33.333 0.24 0.00 0.00 2.57
1668 3569 3.116120 TCCTACCAGGATTAATGGGCCTA 60.116 47.826 4.53 0.00 40.06 3.93
1714 3615 0.961019 GCATTGGAAGAAGCCACACA 59.039 50.000 0.00 0.00 37.75 3.72
1716 3617 1.865788 GCGCATTGGAAGAAGCCACA 61.866 55.000 0.30 0.00 37.75 4.17
1773 3674 2.755650 GAGTCGAAACCAAAGAGCTCA 58.244 47.619 17.77 0.00 0.00 4.26
1782 3683 2.886862 TAACCAACGAGTCGAAACCA 57.113 45.000 21.50 0.00 0.00 3.67
1832 3733 4.735578 GCAAATCCATGCAGTTAGTGATGG 60.736 45.833 10.31 10.31 45.70 3.51
1866 3774 7.362920 GCAGGAAAAACCATTGAAGCTCTAATA 60.363 37.037 0.00 0.00 42.04 0.98
1869 3777 4.218417 GCAGGAAAAACCATTGAAGCTCTA 59.782 41.667 0.00 0.00 42.04 2.43
1880 3788 1.178276 AACACGTGCAGGAAAAACCA 58.822 45.000 17.22 0.00 42.04 3.67
1892 3800 2.214397 TAACGCGCAATAAACACGTG 57.786 45.000 15.48 15.48 37.01 4.49
1903 3811 8.775527 TCCTCAAATATTATATTTTAACGCGCA 58.224 29.630 5.73 0.00 0.00 6.09
1904 3812 9.601971 TTCCTCAAATATTATATTTTAACGCGC 57.398 29.630 5.73 0.00 0.00 6.86
1919 3832 7.810260 AGGCTTCTAGTGATTTCCTCAAATAT 58.190 34.615 0.00 0.00 35.07 1.28
1921 3834 6.072199 AGGCTTCTAGTGATTTCCTCAAAT 57.928 37.500 0.00 0.00 35.07 2.32
1958 3871 3.698040 CCCAGCTATGTTCAGAGCAAAAT 59.302 43.478 19.12 0.00 41.36 1.82
1966 3879 0.184451 ATGGCCCCAGCTATGTTCAG 59.816 55.000 0.00 0.00 39.01 3.02
2067 3980 0.320160 GGCGTCCGATGGTAATACCC 60.320 60.000 7.03 0.00 37.50 3.69
2293 4211 1.810151 GTCGGTTTCCTGCATAGCAAA 59.190 47.619 0.00 0.00 38.41 3.68
2294 4212 1.448985 GTCGGTTTCCTGCATAGCAA 58.551 50.000 0.00 0.00 38.41 3.91
2295 4213 0.392461 GGTCGGTTTCCTGCATAGCA 60.392 55.000 0.00 0.00 36.92 3.49
2410 4328 5.063438 GCATAACGCACTGATAAAGAACAGA 59.937 40.000 0.00 0.00 41.79 3.41
2500 4418 7.160049 GGCCATAAAGTATACTAGGGAAAGAC 58.840 42.308 5.65 0.00 0.00 3.01
2510 4428 6.013554 ACCACAATGGCCATAAAGTATACT 57.986 37.500 21.15 0.00 42.67 2.12
2513 4431 6.665680 TGTTTACCACAATGGCCATAAAGTAT 59.334 34.615 21.15 11.78 42.67 2.12
2879 4797 8.627208 AGTATGAATATCAATCCGCAGAATTT 57.373 30.769 0.00 0.00 0.00 1.82
2880 4798 9.896645 ATAGTATGAATATCAATCCGCAGAATT 57.103 29.630 0.00 0.00 0.00 2.17
2905 4823 4.844349 AGCCCTCTTACACATACACAAT 57.156 40.909 0.00 0.00 0.00 2.71
2921 4839 5.631119 ACACAATAGTAAACTCAAAGCCCT 58.369 37.500 0.00 0.00 0.00 5.19
2954 4872 4.765339 ACACAATAGTAAACTCAAAGCCCC 59.235 41.667 0.00 0.00 0.00 5.80
2968 4886 4.384868 GCCCCCTTACACATACACAATAGT 60.385 45.833 0.00 0.00 0.00 2.12
2969 4887 4.134563 GCCCCCTTACACATACACAATAG 58.865 47.826 0.00 0.00 0.00 1.73
2970 4888 3.783642 AGCCCCCTTACACATACACAATA 59.216 43.478 0.00 0.00 0.00 1.90
2971 4889 2.580783 AGCCCCCTTACACATACACAAT 59.419 45.455 0.00 0.00 0.00 2.71
2972 4890 1.989586 AGCCCCCTTACACATACACAA 59.010 47.619 0.00 0.00 0.00 3.33
2973 4891 1.663911 AGCCCCCTTACACATACACA 58.336 50.000 0.00 0.00 0.00 3.72
2974 4892 2.752903 CAAAGCCCCCTTACACATACAC 59.247 50.000 0.00 0.00 0.00 2.90
2975 4893 2.645297 TCAAAGCCCCCTTACACATACA 59.355 45.455 0.00 0.00 0.00 2.29
2976 4894 3.279434 CTCAAAGCCCCCTTACACATAC 58.721 50.000 0.00 0.00 0.00 2.39
2977 4895 2.916934 ACTCAAAGCCCCCTTACACATA 59.083 45.455 0.00 0.00 0.00 2.29
2978 4896 1.710809 ACTCAAAGCCCCCTTACACAT 59.289 47.619 0.00 0.00 0.00 3.21
2979 4897 1.145571 ACTCAAAGCCCCCTTACACA 58.854 50.000 0.00 0.00 0.00 3.72
2980 4898 2.160205 GAACTCAAAGCCCCCTTACAC 58.840 52.381 0.00 0.00 0.00 2.90
2981 4899 1.777878 TGAACTCAAAGCCCCCTTACA 59.222 47.619 0.00 0.00 0.00 2.41
2982 4900 2.160205 GTGAACTCAAAGCCCCCTTAC 58.840 52.381 0.00 0.00 0.00 2.34
2983 4901 1.074889 GGTGAACTCAAAGCCCCCTTA 59.925 52.381 0.00 0.00 0.00 2.69
2984 4902 0.178961 GGTGAACTCAAAGCCCCCTT 60.179 55.000 0.00 0.00 0.00 3.95
2985 4903 1.460699 GGTGAACTCAAAGCCCCCT 59.539 57.895 0.00 0.00 0.00 4.79
2986 4904 1.606601 GGGTGAACTCAAAGCCCCC 60.607 63.158 0.00 0.00 33.40 5.40
2987 4905 0.251787 ATGGGTGAACTCAAAGCCCC 60.252 55.000 0.00 0.02 38.57 5.80
2988 4906 1.177401 GATGGGTGAACTCAAAGCCC 58.823 55.000 0.00 0.00 39.73 5.19
2989 4907 1.909700 TGATGGGTGAACTCAAAGCC 58.090 50.000 0.00 0.00 34.44 4.35
2990 4908 3.367703 CCATTGATGGGTGAACTCAAAGC 60.368 47.826 1.92 0.00 44.31 3.51
2991 4909 4.445452 CCATTGATGGGTGAACTCAAAG 57.555 45.455 1.92 0.00 44.31 2.77
3031 4949 3.132289 AGAACGTCTCTCAAACTGGACAA 59.868 43.478 0.00 0.00 0.00 3.18
3092 5010 1.686587 ACAATCAGAGGACGTGTCACA 59.313 47.619 3.42 0.00 0.00 3.58
3171 5095 4.584743 ACAAGGAGAAATGAAAGGTTGTCC 59.415 41.667 0.00 0.00 37.43 4.02
3254 5178 7.579589 TGATATTGCAGTTAAAAATGTGCAC 57.420 32.000 10.75 10.75 45.31 4.57
3471 5414 8.641541 GCCCTCAAAGGATATCAAAATATGAAA 58.358 33.333 4.83 0.00 38.63 2.69
3522 5465 7.520451 AAACCTTTATTGAACTGTTAGACCC 57.480 36.000 0.00 0.00 0.00 4.46
3576 5519 4.189639 AGTCCCGTTTAGTCAGCTTTAG 57.810 45.455 0.00 0.00 0.00 1.85
3579 5522 2.094130 GCTAGTCCCGTTTAGTCAGCTT 60.094 50.000 0.00 0.00 0.00 3.74
3608 5551 5.869649 AGGGATGTAAATGGCCAATAAAC 57.130 39.130 10.96 6.74 0.00 2.01
3632 5575 6.531503 TTCAAGTAGTAGATGGGTCTCAAG 57.468 41.667 0.00 0.00 35.87 3.02
3638 5581 8.007742 AGTCTGATATTCAAGTAGTAGATGGGT 58.992 37.037 0.00 0.00 0.00 4.51
3796 5739 7.093068 ACCACCCTGAAACAAAAAGAAACTAAT 60.093 33.333 0.00 0.00 0.00 1.73
3798 5741 5.717654 ACCACCCTGAAACAAAAAGAAACTA 59.282 36.000 0.00 0.00 0.00 2.24
3928 5871 3.717400 TCGGCATGCTCTAAGTCTAAG 57.283 47.619 18.92 0.00 0.00 2.18
4030 5974 6.546403 CCCAAGTAGACATAGTAGCAAGTCTA 59.454 42.308 0.00 0.00 41.27 2.59
4045 5989 4.284746 AGCTATATTCCTGCCCAAGTAGAC 59.715 45.833 0.00 0.00 0.00 2.59
4259 6383 5.105473 TCCTCTTTTGGTCCTACATAGAACG 60.105 44.000 0.00 0.00 0.00 3.95
4289 6413 4.989797 CACAAGCAACAAATGGCAATTCTA 59.010 37.500 0.00 0.00 0.00 2.10
4324 6448 6.524586 GCAATAGTAACACTTGCAATCTCAAC 59.475 38.462 0.00 0.00 43.62 3.18
4344 6468 8.036575 AGAAATAAAGCATTGAAAGCTGCAATA 58.963 29.630 13.00 1.08 42.53 1.90
4383 6507 1.546476 GCGTCAGAGAGAGGGAGAAAA 59.454 52.381 0.00 0.00 32.81 2.29
4473 6597 3.751479 ACAGCATCCAAAAAGGTTTCC 57.249 42.857 0.00 0.00 39.02 3.13
4524 6648 8.960591 ACTGCATTGTTTTGAGCTAATAGTAAT 58.039 29.630 0.00 0.00 0.00 1.89
4551 6675 5.344884 ACCTGTAAAAACAAACCAACATCG 58.655 37.500 0.00 0.00 0.00 3.84
4666 6795 9.444600 AAAGCAATGCTATCATTTCAGAAAATT 57.555 25.926 8.68 0.00 40.74 1.82
4667 6796 9.444600 AAAAGCAATGCTATCATTTCAGAAAAT 57.555 25.926 8.68 0.00 40.74 1.82
4684 6813 5.103290 AGAAAGCATTTGCAAAAGCAATG 57.897 34.783 33.29 20.34 39.27 2.82
4685 6814 5.529800 AGAAGAAAGCATTTGCAAAAGCAAT 59.470 32.000 33.29 23.77 39.27 3.56
4690 6819 6.476380 CACTACAGAAGAAAGCATTTGCAAAA 59.524 34.615 17.19 0.00 39.27 2.44
4810 6939 2.102578 GCCTCCATTTGCTGTACCATT 58.897 47.619 0.00 0.00 0.00 3.16
4813 6942 1.376609 CCGCCTCCATTTGCTGTACC 61.377 60.000 0.00 0.00 0.00 3.34
4831 6960 6.597562 TGGGTGTTGATATAGTTATTCCACC 58.402 40.000 0.00 0.00 39.22 4.61
5193 7331 7.335924 GGCGCACTTAAAATCCCAATATATAGA 59.664 37.037 10.83 0.00 0.00 1.98
5283 7426 5.989477 AGCAGGTGAACACTAAATAGCATA 58.011 37.500 4.96 0.00 0.00 3.14
5298 7441 1.003118 AGCAAACCGATTAGCAGGTGA 59.997 47.619 0.00 0.00 41.21 4.02
5300 7443 3.560636 ATAGCAAACCGATTAGCAGGT 57.439 42.857 0.00 0.00 43.68 4.00
5302 7445 5.065218 AGACAAATAGCAAACCGATTAGCAG 59.935 40.000 0.00 0.00 0.00 4.24
5311 7454 4.681483 GTGCTGAAAGACAAATAGCAAACC 59.319 41.667 0.00 0.00 44.88 3.27
5333 7476 5.701224 TGGGAAAAAGAGACCTAACAATGT 58.299 37.500 0.00 0.00 0.00 2.71
5530 7673 3.999663 AGAAGGTTGATGAAGAAAGCTCG 59.000 43.478 0.00 0.00 33.19 5.03
5580 7723 2.373169 CCCCCATACTGTCACAGCATAT 59.627 50.000 4.13 0.00 34.37 1.78
5594 7745 3.678965 TGCTCTAAAAATGCCCCCATA 57.321 42.857 0.00 0.00 0.00 2.74
5623 7774 7.925483 GCTATCAAGCTCTCTCTTAAATCTCAA 59.075 37.037 0.00 0.00 45.85 3.02
5724 7883 0.716108 GCAGTAGCGCTTGTGTACTG 59.284 55.000 25.86 25.86 44.36 2.74
5804 7963 2.244695 ACGAGTATGGGAAGTGTCACA 58.755 47.619 5.62 0.00 42.84 3.58
5829 7988 5.127031 AGACTATCTTTCTCTCCTTGAGCAC 59.873 44.000 0.00 0.00 42.38 4.40
5915 8074 1.669999 ATTCAATGCTTCCGCCAGGC 61.670 55.000 0.00 0.00 37.47 4.85
5933 8092 7.759489 TGAGCTTAAGTACATTGGTTTTGAT 57.241 32.000 4.02 0.00 0.00 2.57
5948 8107 3.374988 TCGATGTTTGGCATGAGCTTAAG 59.625 43.478 0.00 0.00 41.70 1.85
6095 8263 6.435277 AGCAATCCAAGATGTCAAATGTTACT 59.565 34.615 0.00 0.00 0.00 2.24
6100 8268 5.068234 ACAGCAATCCAAGATGTCAAATG 57.932 39.130 0.00 0.00 27.78 2.32
6133 8301 7.707035 AGCTGAATATACGAGAAAAAGGTAGTG 59.293 37.037 0.00 0.00 0.00 2.74
6139 8307 6.291849 CGGTGAGCTGAATATACGAGAAAAAG 60.292 42.308 0.00 0.00 0.00 2.27
6150 8318 7.624360 TTAACAAAATCGGTGAGCTGAATAT 57.376 32.000 0.00 0.00 33.10 1.28
6163 8331 3.129287 AGGAGCCTGCATTAACAAAATCG 59.871 43.478 0.00 0.00 0.00 3.34
6170 8338 2.356069 GCTGTTAGGAGCCTGCATTAAC 59.644 50.000 0.00 0.00 32.35 2.01
6339 8507 2.773661 TGGCTCAGATCCTTCATAAGCA 59.226 45.455 0.00 0.00 0.00 3.91
6373 8541 8.936864 ACTAATACAGATGAAGCTTGTAAACAC 58.063 33.333 2.10 0.00 0.00 3.32
6739 8907 7.319646 TGCATGTAATTTTAAAAGGTAGCTGG 58.680 34.615 6.79 0.00 0.00 4.85
7313 9483 2.034104 TGCATCCTCAGCAGATTCAC 57.966 50.000 0.00 0.00 37.02 3.18
7368 9538 2.031012 CCCTCACAGCGCTTGTCA 59.969 61.111 7.50 0.00 38.16 3.58
7398 9568 3.507411 GGACATAGAGGGTGCCACTATA 58.493 50.000 0.00 0.00 35.74 1.31
7401 9571 1.330655 CGGACATAGAGGGTGCCACT 61.331 60.000 0.00 0.00 0.00 4.00
7413 9583 2.276201 CTGCGAAAACCATCGGACATA 58.724 47.619 0.00 0.00 42.93 2.29
7548 9718 8.426881 TGTTAGCAGTAATGCAATCGTTTATA 57.573 30.769 18.53 0.00 37.25 0.98
7660 9830 1.301558 GCATCAGCCCTCCATCTCG 60.302 63.158 0.00 0.00 33.58 4.04
7904 10083 1.800586 TGATTCTGTTCTGTGCGCTTC 59.199 47.619 9.73 2.14 0.00 3.86
7932 10111 4.081752 GCAGTCTCCTTCATCTCTGAAAGA 60.082 45.833 0.00 0.00 43.69 2.52
7953 10132 3.452786 CGCCCTTCTCTCTCCGCA 61.453 66.667 0.00 0.00 0.00 5.69
8247 10426 1.285280 TGCAGGCTATAACCACCAGT 58.715 50.000 0.00 0.00 0.00 4.00
8358 10542 2.354510 TGAAGCAACTATTATGCACGCC 59.645 45.455 0.00 0.00 46.22 5.68
8371 10559 8.673626 TCAATTCGATAAAAGAATGAAGCAAC 57.326 30.769 0.00 0.00 38.24 4.17
8487 10680 4.846779 TCAGAAATGGGAAGGAAAAACG 57.153 40.909 0.00 0.00 0.00 3.60
8633 10832 2.569404 GGGTAGGGGATCAGAGCTATTG 59.431 54.545 0.00 0.00 0.00 1.90
8634 10833 2.456733 AGGGTAGGGGATCAGAGCTATT 59.543 50.000 0.00 0.00 0.00 1.73
8724 10923 7.855375 ACAAATCAATTCTCTCTACAGATCCA 58.145 34.615 0.00 0.00 0.00 3.41
8921 11552 2.677003 CGACCCTTTTCGCATGCGT 61.677 57.895 36.50 18.21 40.74 5.24
8928 11559 5.352643 AATAACTTTGTCGACCCTTTTCG 57.647 39.130 14.12 0.00 40.53 3.46
8969 11600 5.200368 ACCCAATTCATGTCAACTTTGTC 57.800 39.130 0.00 0.00 0.00 3.18
9101 11732 4.325084 AGGCTAGTCTGAGTTTAGGTCT 57.675 45.455 0.00 0.00 0.00 3.85
9102 11733 6.527057 TTTAGGCTAGTCTGAGTTTAGGTC 57.473 41.667 7.24 0.00 0.00 3.85
9103 11734 6.183360 CGATTTAGGCTAGTCTGAGTTTAGGT 60.183 42.308 7.24 0.00 0.00 3.08
9104 11735 6.039493 TCGATTTAGGCTAGTCTGAGTTTAGG 59.961 42.308 7.24 0.00 0.00 2.69
9105 11736 7.028926 TCGATTTAGGCTAGTCTGAGTTTAG 57.971 40.000 7.24 0.00 0.00 1.85
9106 11737 7.584122 ATCGATTTAGGCTAGTCTGAGTTTA 57.416 36.000 7.24 0.00 0.00 2.01
9107 11738 5.916661 TCGATTTAGGCTAGTCTGAGTTT 57.083 39.130 7.24 0.00 0.00 2.66
9108 11739 6.472686 AATCGATTTAGGCTAGTCTGAGTT 57.527 37.500 7.24 0.00 0.00 3.01
9109 11740 7.584122 TTAATCGATTTAGGCTAGTCTGAGT 57.416 36.000 17.19 0.00 0.00 3.41
9110 11741 7.382759 GGTTTAATCGATTTAGGCTAGTCTGAG 59.617 40.741 17.19 0.00 0.00 3.35
9111 11742 7.147794 TGGTTTAATCGATTTAGGCTAGTCTGA 60.148 37.037 17.19 0.00 0.00 3.27
9112 11743 6.984474 TGGTTTAATCGATTTAGGCTAGTCTG 59.016 38.462 17.19 0.00 0.00 3.51
9113 11744 7.120923 TGGTTTAATCGATTTAGGCTAGTCT 57.879 36.000 17.19 0.74 0.00 3.24
9114 11745 7.781548 TTGGTTTAATCGATTTAGGCTAGTC 57.218 36.000 17.19 0.00 0.00 2.59
9115 11746 8.379457 GATTGGTTTAATCGATTTAGGCTAGT 57.621 34.615 17.19 0.00 36.16 2.57
9131 11762 9.968870 GTGGTAATTTTGTAACAGATTGGTTTA 57.031 29.630 0.00 0.00 32.29 2.01
9132 11763 8.478877 TGTGGTAATTTTGTAACAGATTGGTTT 58.521 29.630 0.00 0.00 32.29 3.27
9133 11764 8.012957 TGTGGTAATTTTGTAACAGATTGGTT 57.987 30.769 0.00 0.00 34.81 3.67
9134 11765 7.589958 TGTGGTAATTTTGTAACAGATTGGT 57.410 32.000 0.00 0.00 0.00 3.67
9135 11766 7.116233 GCTTGTGGTAATTTTGTAACAGATTGG 59.884 37.037 0.00 0.00 0.00 3.16
9136 11767 7.651304 TGCTTGTGGTAATTTTGTAACAGATTG 59.349 33.333 0.00 0.00 0.00 2.67
9137 11768 7.721402 TGCTTGTGGTAATTTTGTAACAGATT 58.279 30.769 0.00 0.00 0.00 2.40
9138 11769 7.283625 TGCTTGTGGTAATTTTGTAACAGAT 57.716 32.000 0.00 0.00 0.00 2.90
9139 11770 6.701145 TGCTTGTGGTAATTTTGTAACAGA 57.299 33.333 0.00 0.00 0.00 3.41
9140 11771 7.114811 GTCATGCTTGTGGTAATTTTGTAACAG 59.885 37.037 0.00 0.00 0.00 3.16
9141 11772 6.920758 GTCATGCTTGTGGTAATTTTGTAACA 59.079 34.615 0.00 0.00 0.00 2.41
9142 11773 7.145323 AGTCATGCTTGTGGTAATTTTGTAAC 58.855 34.615 0.00 0.00 0.00 2.50
9143 11774 7.283625 AGTCATGCTTGTGGTAATTTTGTAA 57.716 32.000 0.00 0.00 0.00 2.41
9144 11775 6.892658 AGTCATGCTTGTGGTAATTTTGTA 57.107 33.333 0.00 0.00 0.00 2.41
9145 11776 5.789643 AGTCATGCTTGTGGTAATTTTGT 57.210 34.783 0.00 0.00 0.00 2.83
9190 11821 9.448438 TGTGTTTAATTTGAGTATAGACATGCT 57.552 29.630 0.00 0.00 0.00 3.79
9199 11830 9.337091 GCACGTTAATGTGTTTAATTTGAGTAT 57.663 29.630 24.88 0.00 41.94 2.12
9200 11831 7.531198 CGCACGTTAATGTGTTTAATTTGAGTA 59.469 33.333 24.88 0.00 41.94 2.59
9201 11832 6.358558 CGCACGTTAATGTGTTTAATTTGAGT 59.641 34.615 24.88 0.00 41.94 3.41
9202 11833 6.183359 CCGCACGTTAATGTGTTTAATTTGAG 60.183 38.462 24.88 2.16 41.94 3.02
9203 11834 5.625721 CCGCACGTTAATGTGTTTAATTTGA 59.374 36.000 24.88 0.00 41.94 2.69
9204 11835 5.164138 CCCGCACGTTAATGTGTTTAATTTG 60.164 40.000 24.88 8.22 41.94 2.32
9205 11836 4.918583 CCCGCACGTTAATGTGTTTAATTT 59.081 37.500 24.88 0.00 41.94 1.82
9206 11837 4.215827 TCCCGCACGTTAATGTGTTTAATT 59.784 37.500 24.88 0.00 41.94 1.40
9207 11838 3.752222 TCCCGCACGTTAATGTGTTTAAT 59.248 39.130 24.88 0.00 41.94 1.40
9208 11839 3.136763 TCCCGCACGTTAATGTGTTTAA 58.863 40.909 24.88 9.51 41.94 1.52
9209 11840 2.763933 TCCCGCACGTTAATGTGTTTA 58.236 42.857 24.88 9.20 41.94 2.01
9210 11841 1.595466 TCCCGCACGTTAATGTGTTT 58.405 45.000 24.88 0.00 41.94 2.83
9211 11842 3.309052 TCCCGCACGTTAATGTGTT 57.691 47.368 24.88 0.00 41.94 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.