Multiple sequence alignment - TraesCS2A01G059100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G059100 chr2A 100.000 2672 0 0 1 2672 25046827 25044156 0.000000e+00 4935.0
1 TraesCS2A01G059100 chr2A 84.956 565 42 19 1501 2029 88322730 88323287 1.410000e-147 532.0
2 TraesCS2A01G059100 chr2A 80.252 476 73 16 2085 2552 25130760 25130298 3.290000e-89 339.0
3 TraesCS2A01G059100 chr2A 86.096 187 24 1 2178 2364 25118561 25118377 1.620000e-47 200.0
4 TraesCS2A01G059100 chr7D 96.906 2036 55 5 1 2029 563696710 563698744 0.000000e+00 3404.0
5 TraesCS2A01G059100 chr7D 96.318 2037 61 9 1 2029 156075544 156077574 0.000000e+00 3334.0
6 TraesCS2A01G059100 chr7D 95.662 438 15 3 1595 2029 94792802 94793238 0.000000e+00 701.0
7 TraesCS2A01G059100 chr4A 96.818 2043 56 5 1 2035 566906856 566904815 0.000000e+00 3404.0
8 TraesCS2A01G059100 chr4A 81.581 1683 288 20 3 1672 617932021 617930348 0.000000e+00 1371.0
9 TraesCS2A01G059100 chr2B 93.278 2038 113 8 1 2023 173187263 173189291 0.000000e+00 2983.0
10 TraesCS2A01G059100 chr2B 81.352 917 157 11 235 1143 786784404 786785314 0.000000e+00 734.0
11 TraesCS2A01G059100 chr2B 81.739 690 120 5 3 688 34338065 34338752 2.980000e-159 571.0
12 TraesCS2A01G059100 chr7B 81.157 1677 295 18 3 1667 37117446 37115779 0.000000e+00 1327.0
13 TraesCS2A01G059100 chr7B 95.652 46 2 0 2507 2552 618503334 618503289 1.030000e-09 75.0
14 TraesCS2A01G059100 chr3A 80.918 1656 292 18 8 1656 698262996 698261358 0.000000e+00 1286.0
15 TraesCS2A01G059100 chr3A 78.808 151 20 5 1889 2029 725089340 725089488 1.020000e-14 91.6
16 TraesCS2A01G059100 chr3A 94.000 50 3 0 2620 2669 68364005 68364054 2.850000e-10 76.8
17 TraesCS2A01G059100 chr6A 84.588 571 44 20 1501 2035 214570937 214570375 6.550000e-146 527.0
18 TraesCS2A01G059100 chr6A 87.168 226 17 4 1822 2035 46577587 46577362 2.050000e-61 246.0
19 TraesCS2A01G059100 chr5B 84.276 566 45 23 1501 2029 536844843 536845401 1.830000e-141 512.0
20 TraesCS2A01G059100 chr5B 97.500 40 1 0 2512 2551 508873593 508873632 4.770000e-08 69.4
21 TraesCS2A01G059100 chr1A 82.913 357 37 10 1356 1709 14428719 14428384 1.550000e-77 300.0
22 TraesCS2A01G059100 chr1A 79.866 149 20 4 1889 2029 22336093 22336239 1.690000e-17 100.0
23 TraesCS2A01G059100 chr6D 83.281 317 27 11 1731 2036 171326523 171326222 4.380000e-68 268.0
24 TraesCS2A01G059100 chr6D 100.000 40 0 0 2506 2545 309043944 309043905 1.030000e-09 75.0
25 TraesCS2A01G059100 chr2D 91.935 62 4 1 2609 2669 327614826 327614887 4.740000e-13 86.1
26 TraesCS2A01G059100 chr5A 94.340 53 3 0 2618 2670 21413071 21413123 6.130000e-12 82.4
27 TraesCS2A01G059100 chr5A 97.500 40 1 0 2512 2551 535620141 535620180 4.770000e-08 69.4
28 TraesCS2A01G059100 chr5A 92.500 40 1 2 2507 2545 656467727 656467765 3.720000e-04 56.5
29 TraesCS2A01G059100 chr7A 89.394 66 4 2 2610 2672 33153254 33153189 2.210000e-11 80.5
30 TraesCS2A01G059100 chrUn 93.182 44 1 2 2513 2555 30028806 30028764 2.220000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G059100 chr2A 25044156 25046827 2671 True 4935 4935 100.000 1 2672 1 chr2A.!!$R1 2671
1 TraesCS2A01G059100 chr2A 88322730 88323287 557 False 532 532 84.956 1501 2029 1 chr2A.!!$F1 528
2 TraesCS2A01G059100 chr7D 563696710 563698744 2034 False 3404 3404 96.906 1 2029 1 chr7D.!!$F3 2028
3 TraesCS2A01G059100 chr7D 156075544 156077574 2030 False 3334 3334 96.318 1 2029 1 chr7D.!!$F2 2028
4 TraesCS2A01G059100 chr4A 566904815 566906856 2041 True 3404 3404 96.818 1 2035 1 chr4A.!!$R1 2034
5 TraesCS2A01G059100 chr4A 617930348 617932021 1673 True 1371 1371 81.581 3 1672 1 chr4A.!!$R2 1669
6 TraesCS2A01G059100 chr2B 173187263 173189291 2028 False 2983 2983 93.278 1 2023 1 chr2B.!!$F2 2022
7 TraesCS2A01G059100 chr2B 786784404 786785314 910 False 734 734 81.352 235 1143 1 chr2B.!!$F3 908
8 TraesCS2A01G059100 chr2B 34338065 34338752 687 False 571 571 81.739 3 688 1 chr2B.!!$F1 685
9 TraesCS2A01G059100 chr7B 37115779 37117446 1667 True 1327 1327 81.157 3 1667 1 chr7B.!!$R1 1664
10 TraesCS2A01G059100 chr3A 698261358 698262996 1638 True 1286 1286 80.918 8 1656 1 chr3A.!!$R1 1648
11 TraesCS2A01G059100 chr6A 214570375 214570937 562 True 527 527 84.588 1501 2035 1 chr6A.!!$R2 534
12 TraesCS2A01G059100 chr5B 536844843 536845401 558 False 512 512 84.276 1501 2029 1 chr5B.!!$F2 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
697 706 4.060038 AGTGTCCAAGCTATTCGGTATG 57.94 45.455 0.0 0.0 0.0 2.39 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2104 2160 0.107993 AGCCACCATCACTCATCGTG 60.108 55.0 0.0 0.0 45.18 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 6.299805 TGATCCTATAATGCAGGACCATAC 57.700 41.667 0.00 0.00 44.89 2.39
431 435 4.590850 AGAAAGGAAAACATCAAGGTGC 57.409 40.909 0.00 0.00 0.00 5.01
604 613 4.120589 CGGTTCTACTAAAAGATGGGAGC 58.879 47.826 0.00 0.00 0.00 4.70
624 633 9.403583 TGGGAGCTATTGGTTAATAAAGTTAAG 57.596 33.333 0.00 0.00 0.00 1.85
697 706 4.060038 AGTGTCCAAGCTATTCGGTATG 57.940 45.455 0.00 0.00 0.00 2.39
813 823 9.435688 ACTGCACTTAAGAATTTTGAACTTTTT 57.564 25.926 10.09 0.00 0.00 1.94
959 971 4.081972 TCAGAAGTACAGAACTGATGGCTC 60.082 45.833 8.87 0.00 38.88 4.70
1049 1061 7.190871 ACAAAACGTCGTGTTATGAGAAAAAT 58.809 30.769 0.00 0.00 40.84 1.82
1471 1489 7.778083 TGCTTATCGAATCCTCTTAACTGTTA 58.222 34.615 0.00 0.00 0.00 2.41
1571 1589 4.015084 CAAGAGAGATTGAATGGCTTGGT 58.985 43.478 0.00 0.00 31.55 3.67
1724 1743 0.038744 AGGTGGCTCCTGATGTTTGG 59.961 55.000 7.43 0.00 46.19 3.28
1733 1752 1.887854 CCTGATGTTTGGTGATGCACA 59.112 47.619 0.00 0.00 35.86 4.57
1942 1979 7.593825 ACGCTTGCTTTTATAATGACTTTTCT 58.406 30.769 0.00 0.00 0.00 2.52
2041 2097 2.914379 GGACCGACCTTGAGTGTTG 58.086 57.895 0.00 0.00 35.41 3.33
2042 2098 0.391597 GGACCGACCTTGAGTGTTGA 59.608 55.000 0.00 0.00 35.41 3.18
2043 2099 1.002087 GGACCGACCTTGAGTGTTGAT 59.998 52.381 0.00 0.00 35.41 2.57
2044 2100 2.550208 GGACCGACCTTGAGTGTTGATT 60.550 50.000 0.00 0.00 35.41 2.57
2045 2101 3.306502 GGACCGACCTTGAGTGTTGATTA 60.307 47.826 0.00 0.00 35.41 1.75
2046 2102 4.312443 GACCGACCTTGAGTGTTGATTAA 58.688 43.478 0.00 0.00 0.00 1.40
2047 2103 4.906618 ACCGACCTTGAGTGTTGATTAAT 58.093 39.130 0.00 0.00 0.00 1.40
2048 2104 6.045072 ACCGACCTTGAGTGTTGATTAATA 57.955 37.500 0.00 0.00 0.00 0.98
2049 2105 6.650120 ACCGACCTTGAGTGTTGATTAATAT 58.350 36.000 0.00 0.00 0.00 1.28
2050 2106 6.538742 ACCGACCTTGAGTGTTGATTAATATG 59.461 38.462 0.00 0.00 0.00 1.78
2051 2107 6.017934 CCGACCTTGAGTGTTGATTAATATGG 60.018 42.308 0.00 0.00 0.00 2.74
2052 2108 6.761242 CGACCTTGAGTGTTGATTAATATGGA 59.239 38.462 0.00 0.00 0.00 3.41
2053 2109 7.042456 CGACCTTGAGTGTTGATTAATATGGAG 60.042 40.741 0.00 0.00 0.00 3.86
2054 2110 7.861629 ACCTTGAGTGTTGATTAATATGGAGA 58.138 34.615 0.00 0.00 0.00 3.71
2055 2111 8.497745 ACCTTGAGTGTTGATTAATATGGAGAT 58.502 33.333 0.00 0.00 0.00 2.75
2056 2112 8.997323 CCTTGAGTGTTGATTAATATGGAGATC 58.003 37.037 0.00 0.00 0.00 2.75
2057 2113 9.551734 CTTGAGTGTTGATTAATATGGAGATCA 57.448 33.333 0.00 0.00 0.00 2.92
2074 2130 7.547227 TGGAGATCATATATTCATGGTGTACG 58.453 38.462 0.00 0.00 0.00 3.67
2075 2131 7.178451 TGGAGATCATATATTCATGGTGTACGT 59.822 37.037 0.00 0.00 0.00 3.57
2076 2132 7.702772 GGAGATCATATATTCATGGTGTACGTC 59.297 40.741 0.00 0.00 0.00 4.34
2077 2133 8.354711 AGATCATATATTCATGGTGTACGTCT 57.645 34.615 0.00 0.00 0.00 4.18
2078 2134 8.246871 AGATCATATATTCATGGTGTACGTCTG 58.753 37.037 0.00 0.00 0.00 3.51
2079 2135 6.687604 TCATATATTCATGGTGTACGTCTGG 58.312 40.000 0.00 0.00 0.00 3.86
2080 2136 2.691409 ATTCATGGTGTACGTCTGGG 57.309 50.000 0.00 0.00 0.00 4.45
2081 2137 1.344065 TTCATGGTGTACGTCTGGGT 58.656 50.000 0.00 0.00 0.00 4.51
2082 2138 0.606096 TCATGGTGTACGTCTGGGTG 59.394 55.000 0.00 0.00 0.00 4.61
2083 2139 0.320374 CATGGTGTACGTCTGGGTGT 59.680 55.000 0.00 0.00 0.00 4.16
2084 2140 1.053424 ATGGTGTACGTCTGGGTGTT 58.947 50.000 0.00 0.00 0.00 3.32
2085 2141 1.702182 TGGTGTACGTCTGGGTGTTA 58.298 50.000 0.00 0.00 0.00 2.41
2086 2142 1.340889 TGGTGTACGTCTGGGTGTTAC 59.659 52.381 0.00 0.00 0.00 2.50
2087 2143 1.337167 GGTGTACGTCTGGGTGTTACC 60.337 57.143 0.00 0.00 37.60 2.85
2088 2144 1.340889 GTGTACGTCTGGGTGTTACCA 59.659 52.381 0.00 0.00 41.02 3.25
2095 2151 3.167291 TGGGTGTTACCAGCTACCA 57.833 52.632 3.59 0.00 41.02 3.25
2096 2152 1.663911 TGGGTGTTACCAGCTACCAT 58.336 50.000 3.59 0.00 41.02 3.55
2097 2153 1.989586 TGGGTGTTACCAGCTACCATT 59.010 47.619 3.59 0.00 41.02 3.16
2098 2154 2.290641 TGGGTGTTACCAGCTACCATTG 60.291 50.000 3.59 0.00 41.02 2.82
2099 2155 2.290705 GGGTGTTACCAGCTACCATTGT 60.291 50.000 3.59 0.00 41.02 2.71
2100 2156 2.747446 GGTGTTACCAGCTACCATTGTG 59.253 50.000 0.00 0.00 38.42 3.33
2101 2157 3.558321 GGTGTTACCAGCTACCATTGTGA 60.558 47.826 0.00 0.00 38.42 3.58
2102 2158 4.069304 GTGTTACCAGCTACCATTGTGAA 58.931 43.478 0.00 0.00 0.00 3.18
2103 2159 4.517453 GTGTTACCAGCTACCATTGTGAAA 59.483 41.667 0.00 0.00 0.00 2.69
2104 2160 4.517453 TGTTACCAGCTACCATTGTGAAAC 59.483 41.667 0.00 0.00 37.35 2.78
2122 2178 4.941609 ACGATGAGTGATGGTGGC 57.058 55.556 0.00 0.00 0.00 5.01
2123 2179 2.290847 ACGATGAGTGATGGTGGCT 58.709 52.632 0.00 0.00 0.00 4.75
2124 2180 1.485124 ACGATGAGTGATGGTGGCTA 58.515 50.000 0.00 0.00 0.00 3.93
2125 2181 1.137086 ACGATGAGTGATGGTGGCTAC 59.863 52.381 0.00 0.00 0.00 3.58
2126 2182 1.136891 CGATGAGTGATGGTGGCTACA 59.863 52.381 1.52 0.00 0.00 2.74
2127 2183 2.224137 CGATGAGTGATGGTGGCTACAT 60.224 50.000 1.52 0.00 0.00 2.29
2128 2184 2.988010 TGAGTGATGGTGGCTACATC 57.012 50.000 1.52 12.88 43.82 3.06
2129 2185 1.136891 TGAGTGATGGTGGCTACATCG 59.863 52.381 1.52 0.00 45.90 3.84
2130 2186 1.137086 GAGTGATGGTGGCTACATCGT 59.863 52.381 1.52 6.84 45.90 3.73
2131 2187 1.134699 AGTGATGGTGGCTACATCGTG 60.135 52.381 1.52 0.00 45.90 4.35
2132 2188 0.177836 TGATGGTGGCTACATCGTGG 59.822 55.000 1.52 0.00 45.90 4.94
2133 2189 0.178068 GATGGTGGCTACATCGTGGT 59.822 55.000 1.52 0.00 35.84 4.16
2134 2190 0.618458 ATGGTGGCTACATCGTGGTT 59.382 50.000 1.52 0.00 0.00 3.67
2135 2191 0.321210 TGGTGGCTACATCGTGGTTG 60.321 55.000 1.52 0.00 0.00 3.77
2136 2192 1.024579 GGTGGCTACATCGTGGTTGG 61.025 60.000 1.52 0.00 0.00 3.77
2137 2193 1.024579 GTGGCTACATCGTGGTTGGG 61.025 60.000 0.00 0.00 0.00 4.12
2138 2194 1.298667 GGCTACATCGTGGTTGGGT 59.701 57.895 0.00 0.00 0.00 4.51
2139 2195 0.322187 GGCTACATCGTGGTTGGGTT 60.322 55.000 0.00 0.00 0.00 4.11
2140 2196 0.802494 GCTACATCGTGGTTGGGTTG 59.198 55.000 0.00 0.00 0.00 3.77
2141 2197 1.448985 CTACATCGTGGTTGGGTTGG 58.551 55.000 0.00 0.00 0.00 3.77
2142 2198 0.766131 TACATCGTGGTTGGGTTGGT 59.234 50.000 0.00 0.00 0.00 3.67
2143 2199 0.821711 ACATCGTGGTTGGGTTGGTG 60.822 55.000 0.00 0.00 0.00 4.17
2144 2200 1.228429 ATCGTGGTTGGGTTGGTGG 60.228 57.895 0.00 0.00 0.00 4.61
2145 2201 2.002018 ATCGTGGTTGGGTTGGTGGT 62.002 55.000 0.00 0.00 0.00 4.16
2146 2202 1.755008 CGTGGTTGGGTTGGTGGTT 60.755 57.895 0.00 0.00 0.00 3.67
2147 2203 1.730451 CGTGGTTGGGTTGGTGGTTC 61.730 60.000 0.00 0.00 0.00 3.62
2148 2204 1.454111 TGGTTGGGTTGGTGGTTCG 60.454 57.895 0.00 0.00 0.00 3.95
2149 2205 2.725641 GTTGGGTTGGTGGTTCGC 59.274 61.111 0.00 0.00 0.00 4.70
2150 2206 2.519780 TTGGGTTGGTGGTTCGCC 60.520 61.111 0.00 0.00 37.92 5.54
2151 2207 3.360423 TTGGGTTGGTGGTTCGCCA 62.360 57.895 0.00 0.00 46.87 5.69
2162 2218 2.833794 TGGTTCGCCAAGACATATAGC 58.166 47.619 0.00 0.00 45.88 2.97
2163 2219 2.801699 TGGTTCGCCAAGACATATAGCG 60.802 50.000 0.00 0.00 45.88 4.26
2164 2220 1.192534 GTTCGCCAAGACATATAGCGC 59.807 52.381 0.00 0.00 46.04 5.92
2165 2221 0.673985 TCGCCAAGACATATAGCGCT 59.326 50.000 17.26 17.26 46.04 5.92
2166 2222 1.883926 TCGCCAAGACATATAGCGCTA 59.116 47.619 21.30 21.30 46.04 4.26
2167 2223 1.986378 CGCCAAGACATATAGCGCTAC 59.014 52.381 21.49 6.58 40.35 3.58
2168 2224 2.338500 GCCAAGACATATAGCGCTACC 58.662 52.381 21.49 6.87 0.00 3.18
2169 2225 2.288825 GCCAAGACATATAGCGCTACCA 60.289 50.000 21.49 11.35 0.00 3.25
2170 2226 3.617531 GCCAAGACATATAGCGCTACCAT 60.618 47.826 21.49 13.30 0.00 3.55
2171 2227 3.928992 CCAAGACATATAGCGCTACCATG 59.071 47.826 27.28 27.28 0.00 3.66
2172 2228 4.321974 CCAAGACATATAGCGCTACCATGA 60.322 45.833 32.15 12.01 0.00 3.07
2173 2229 4.710423 AGACATATAGCGCTACCATGAG 57.290 45.455 32.15 18.31 0.00 2.90
2174 2230 3.445450 AGACATATAGCGCTACCATGAGG 59.555 47.826 32.15 16.86 42.21 3.86
2189 2245 5.557576 CCATGAGGTGATCTCCATAGAAA 57.442 43.478 15.93 0.00 41.76 2.52
2190 2246 6.124316 CCATGAGGTGATCTCCATAGAAAT 57.876 41.667 15.93 0.00 41.76 2.17
2191 2247 7.250032 CCATGAGGTGATCTCCATAGAAATA 57.750 40.000 15.93 0.00 41.76 1.40
2192 2248 7.102346 CCATGAGGTGATCTCCATAGAAATAC 58.898 42.308 15.93 0.00 41.76 1.89
2193 2249 7.256439 CCATGAGGTGATCTCCATAGAAATACA 60.256 40.741 15.93 2.96 41.76 2.29
2194 2250 7.862274 TGAGGTGATCTCCATAGAAATACAT 57.138 36.000 15.93 0.00 41.76 2.29
2195 2251 7.674120 TGAGGTGATCTCCATAGAAATACATG 58.326 38.462 15.93 0.00 41.76 3.21
2196 2252 7.013823 AGGTGATCTCCATAGAAATACATGG 57.986 40.000 15.93 0.00 42.67 3.66
2197 2253 6.789457 AGGTGATCTCCATAGAAATACATGGA 59.211 38.462 15.93 3.45 46.67 3.41
2202 2258 5.894298 TCCATAGAAATACATGGAGCAGT 57.106 39.130 0.00 0.00 44.55 4.40
2203 2259 6.252599 TCCATAGAAATACATGGAGCAGTT 57.747 37.500 0.00 0.00 44.55 3.16
2204 2260 6.291377 TCCATAGAAATACATGGAGCAGTTC 58.709 40.000 0.00 0.00 44.55 3.01
2205 2261 6.057533 CCATAGAAATACATGGAGCAGTTCA 58.942 40.000 0.00 0.00 43.80 3.18
2206 2262 6.017605 CCATAGAAATACATGGAGCAGTTCAC 60.018 42.308 0.00 0.00 43.80 3.18
2207 2263 4.910195 AGAAATACATGGAGCAGTTCACA 58.090 39.130 0.00 0.00 0.00 3.58
2208 2264 4.940046 AGAAATACATGGAGCAGTTCACAG 59.060 41.667 0.00 0.00 0.00 3.66
2209 2265 2.099141 TACATGGAGCAGTTCACAGC 57.901 50.000 0.00 0.00 0.00 4.40
2210 2266 0.607489 ACATGGAGCAGTTCACAGCC 60.607 55.000 0.00 0.00 0.00 4.85
2211 2267 1.376424 ATGGAGCAGTTCACAGCCG 60.376 57.895 0.00 0.00 0.00 5.52
2212 2268 2.031163 GGAGCAGTTCACAGCCGT 59.969 61.111 0.00 0.00 0.00 5.68
2213 2269 2.320587 GGAGCAGTTCACAGCCGTG 61.321 63.158 0.00 0.00 45.08 4.94
2214 2270 2.959357 GAGCAGTTCACAGCCGTGC 61.959 63.158 0.00 0.00 43.28 5.34
2215 2271 2.974698 GCAGTTCACAGCCGTGCT 60.975 61.111 0.00 0.00 43.28 4.40
2216 2272 2.546494 GCAGTTCACAGCCGTGCTT 61.546 57.895 0.00 0.00 43.28 3.91
2217 2273 1.227999 GCAGTTCACAGCCGTGCTTA 61.228 55.000 0.00 0.00 43.28 3.09
2218 2274 1.442769 CAGTTCACAGCCGTGCTTAT 58.557 50.000 0.00 0.00 43.28 1.73
2219 2275 1.806542 CAGTTCACAGCCGTGCTTATT 59.193 47.619 0.00 0.00 43.28 1.40
2220 2276 2.076863 AGTTCACAGCCGTGCTTATTC 58.923 47.619 0.00 0.00 43.28 1.75
2221 2277 1.804151 GTTCACAGCCGTGCTTATTCA 59.196 47.619 0.00 0.00 43.28 2.57
2222 2278 1.438651 TCACAGCCGTGCTTATTCAC 58.561 50.000 0.00 0.00 43.28 3.18
2223 2279 1.001974 TCACAGCCGTGCTTATTCACT 59.998 47.619 0.00 0.00 43.28 3.41
2224 2280 2.232696 TCACAGCCGTGCTTATTCACTA 59.767 45.455 0.00 0.00 43.28 2.74
2225 2281 3.118775 TCACAGCCGTGCTTATTCACTAT 60.119 43.478 0.00 0.00 43.28 2.12
2226 2282 3.623060 CACAGCCGTGCTTATTCACTATT 59.377 43.478 0.00 0.00 36.40 1.73
2227 2283 3.871594 ACAGCCGTGCTTATTCACTATTC 59.128 43.478 0.00 0.00 36.40 1.75
2228 2284 4.122776 CAGCCGTGCTTATTCACTATTCT 58.877 43.478 0.00 0.00 36.40 2.40
2229 2285 4.572389 CAGCCGTGCTTATTCACTATTCTT 59.428 41.667 0.00 0.00 36.40 2.52
2230 2286 4.811557 AGCCGTGCTTATTCACTATTCTTC 59.188 41.667 0.00 0.00 33.89 2.87
2231 2287 4.811557 GCCGTGCTTATTCACTATTCTTCT 59.188 41.667 0.00 0.00 34.92 2.85
2232 2288 5.983720 GCCGTGCTTATTCACTATTCTTCTA 59.016 40.000 0.00 0.00 34.92 2.10
2233 2289 6.479001 GCCGTGCTTATTCACTATTCTTCTAA 59.521 38.462 0.00 0.00 34.92 2.10
2234 2290 7.171678 GCCGTGCTTATTCACTATTCTTCTAAT 59.828 37.037 0.00 0.00 34.92 1.73
2235 2291 8.491152 CCGTGCTTATTCACTATTCTTCTAATG 58.509 37.037 0.00 0.00 34.92 1.90
2236 2292 9.035607 CGTGCTTATTCACTATTCTTCTAATGT 57.964 33.333 0.00 0.00 34.92 2.71
2246 2302 8.763356 CACTATTCTTCTAATGTCTCATCTTGC 58.237 37.037 0.00 0.00 0.00 4.01
2247 2303 8.481314 ACTATTCTTCTAATGTCTCATCTTGCA 58.519 33.333 0.00 0.00 0.00 4.08
2248 2304 9.491675 CTATTCTTCTAATGTCTCATCTTGCAT 57.508 33.333 0.00 0.00 0.00 3.96
2252 2308 9.920133 TCTTCTAATGTCTCATCTTGCATATAC 57.080 33.333 0.00 0.00 0.00 1.47
2253 2309 9.926158 CTTCTAATGTCTCATCTTGCATATACT 57.074 33.333 0.00 0.00 0.00 2.12
2255 2311 9.702494 TCTAATGTCTCATCTTGCATATACTTG 57.298 33.333 0.00 0.00 0.00 3.16
2256 2312 7.741027 AATGTCTCATCTTGCATATACTTGG 57.259 36.000 0.00 0.00 0.00 3.61
2257 2313 5.059161 TGTCTCATCTTGCATATACTTGGC 58.941 41.667 0.00 0.00 0.00 4.52
2258 2314 5.059161 GTCTCATCTTGCATATACTTGGCA 58.941 41.667 0.00 0.00 35.41 4.92
2259 2315 5.049818 GTCTCATCTTGCATATACTTGGCAC 60.050 44.000 0.00 0.00 37.26 5.01
2260 2316 3.809279 TCATCTTGCATATACTTGGCACG 59.191 43.478 0.00 0.00 37.26 5.34
2261 2317 3.535280 TCTTGCATATACTTGGCACGA 57.465 42.857 0.00 0.00 37.26 4.35
2262 2318 3.867857 TCTTGCATATACTTGGCACGAA 58.132 40.909 0.00 0.00 37.26 3.85
2263 2319 4.257731 TCTTGCATATACTTGGCACGAAA 58.742 39.130 0.00 0.00 37.26 3.46
2264 2320 4.697828 TCTTGCATATACTTGGCACGAAAA 59.302 37.500 0.00 0.00 37.26 2.29
2265 2321 5.356751 TCTTGCATATACTTGGCACGAAAAT 59.643 36.000 0.00 0.00 37.26 1.82
2266 2322 4.919206 TGCATATACTTGGCACGAAAATG 58.081 39.130 0.00 0.00 31.58 2.32
2267 2323 3.730715 GCATATACTTGGCACGAAAATGC 59.269 43.478 0.00 5.82 45.34 3.56
2278 2334 4.082274 CACGAAAATGCAGTGCTATTGA 57.918 40.909 17.60 0.00 0.00 2.57
2279 2335 4.475028 CACGAAAATGCAGTGCTATTGAA 58.525 39.130 17.60 0.00 0.00 2.69
2280 2336 5.097529 CACGAAAATGCAGTGCTATTGAAT 58.902 37.500 17.60 0.00 0.00 2.57
2281 2337 5.228635 CACGAAAATGCAGTGCTATTGAATC 59.771 40.000 17.60 11.75 0.00 2.52
2282 2338 5.106197 ACGAAAATGCAGTGCTATTGAATCA 60.106 36.000 17.60 0.00 0.00 2.57
2283 2339 5.975344 CGAAAATGCAGTGCTATTGAATCAT 59.025 36.000 17.60 0.00 0.00 2.45
2284 2340 6.474427 CGAAAATGCAGTGCTATTGAATCATT 59.526 34.615 17.60 1.07 0.00 2.57
2285 2341 7.305820 CGAAAATGCAGTGCTATTGAATCATTC 60.306 37.037 17.60 11.54 0.00 2.67
2286 2342 6.459670 AATGCAGTGCTATTGAATCATTCA 57.540 33.333 17.60 0.00 38.04 2.57
2297 2353 4.700268 TGAATCATTCAAACATGTCCCG 57.300 40.909 0.00 0.00 36.59 5.14
2298 2354 4.078537 TGAATCATTCAAACATGTCCCGT 58.921 39.130 0.00 0.00 36.59 5.28
2299 2355 5.249420 TGAATCATTCAAACATGTCCCGTA 58.751 37.500 0.00 0.00 36.59 4.02
2300 2356 5.353956 TGAATCATTCAAACATGTCCCGTAG 59.646 40.000 0.00 0.00 36.59 3.51
2301 2357 3.006940 TCATTCAAACATGTCCCGTAGC 58.993 45.455 0.00 0.00 0.00 3.58
2302 2358 2.552599 TTCAAACATGTCCCGTAGCA 57.447 45.000 0.00 0.00 0.00 3.49
2303 2359 2.552599 TCAAACATGTCCCGTAGCAA 57.447 45.000 0.00 0.00 0.00 3.91
2304 2360 2.147958 TCAAACATGTCCCGTAGCAAC 58.852 47.619 0.00 0.00 0.00 4.17
2305 2361 1.876799 CAAACATGTCCCGTAGCAACA 59.123 47.619 0.00 0.00 0.00 3.33
2306 2362 2.264005 AACATGTCCCGTAGCAACAA 57.736 45.000 0.00 0.00 0.00 2.83
2307 2363 2.264005 ACATGTCCCGTAGCAACAAA 57.736 45.000 0.00 0.00 0.00 2.83
2308 2364 2.790433 ACATGTCCCGTAGCAACAAAT 58.210 42.857 0.00 0.00 0.00 2.32
2309 2365 3.153919 ACATGTCCCGTAGCAACAAATT 58.846 40.909 0.00 0.00 0.00 1.82
2310 2366 4.328536 ACATGTCCCGTAGCAACAAATTA 58.671 39.130 0.00 0.00 0.00 1.40
2311 2367 4.394920 ACATGTCCCGTAGCAACAAATTAG 59.605 41.667 0.00 0.00 0.00 1.73
2312 2368 4.010667 TGTCCCGTAGCAACAAATTAGT 57.989 40.909 0.00 0.00 0.00 2.24
2313 2369 3.998341 TGTCCCGTAGCAACAAATTAGTC 59.002 43.478 0.00 0.00 0.00 2.59
2314 2370 3.998341 GTCCCGTAGCAACAAATTAGTCA 59.002 43.478 0.00 0.00 0.00 3.41
2315 2371 4.453136 GTCCCGTAGCAACAAATTAGTCAA 59.547 41.667 0.00 0.00 0.00 3.18
2316 2372 5.123344 GTCCCGTAGCAACAAATTAGTCAAT 59.877 40.000 0.00 0.00 0.00 2.57
2317 2373 5.353123 TCCCGTAGCAACAAATTAGTCAATC 59.647 40.000 0.00 0.00 0.00 2.67
2318 2374 5.448632 CCCGTAGCAACAAATTAGTCAATCC 60.449 44.000 0.00 0.00 0.00 3.01
2319 2375 5.354234 CCGTAGCAACAAATTAGTCAATCCT 59.646 40.000 0.00 0.00 0.00 3.24
2320 2376 6.456988 CCGTAGCAACAAATTAGTCAATCCTC 60.457 42.308 0.00 0.00 0.00 3.71
2321 2377 6.313905 CGTAGCAACAAATTAGTCAATCCTCT 59.686 38.462 0.00 0.00 0.00 3.69
2322 2378 7.491372 CGTAGCAACAAATTAGTCAATCCTCTA 59.509 37.037 0.00 0.00 0.00 2.43
2323 2379 7.856145 AGCAACAAATTAGTCAATCCTCTAG 57.144 36.000 0.00 0.00 0.00 2.43
2324 2380 7.624549 AGCAACAAATTAGTCAATCCTCTAGA 58.375 34.615 0.00 0.00 0.00 2.43
2325 2381 8.103305 AGCAACAAATTAGTCAATCCTCTAGAA 58.897 33.333 0.00 0.00 0.00 2.10
2326 2382 8.897752 GCAACAAATTAGTCAATCCTCTAGAAT 58.102 33.333 0.00 0.00 0.00 2.40
2332 2388 8.900983 ATTAGTCAATCCTCTAGAATTGAAGC 57.099 34.615 17.51 9.37 35.18 3.86
2333 2389 5.679601 AGTCAATCCTCTAGAATTGAAGCC 58.320 41.667 17.51 8.83 35.18 4.35
2334 2390 4.819088 GTCAATCCTCTAGAATTGAAGCCC 59.181 45.833 17.51 5.86 35.18 5.19
2335 2391 4.140536 CAATCCTCTAGAATTGAAGCCCC 58.859 47.826 10.46 0.00 0.00 5.80
2336 2392 3.136641 TCCTCTAGAATTGAAGCCCCT 57.863 47.619 0.00 0.00 0.00 4.79
2337 2393 3.464828 TCCTCTAGAATTGAAGCCCCTT 58.535 45.455 0.00 0.00 0.00 3.95
2338 2394 3.852578 TCCTCTAGAATTGAAGCCCCTTT 59.147 43.478 0.00 0.00 0.00 3.11
2339 2395 5.036916 TCCTCTAGAATTGAAGCCCCTTTA 58.963 41.667 0.00 0.00 0.00 1.85
2340 2396 5.672194 TCCTCTAGAATTGAAGCCCCTTTAT 59.328 40.000 0.00 0.00 0.00 1.40
2341 2397 6.849697 TCCTCTAGAATTGAAGCCCCTTTATA 59.150 38.462 0.00 0.00 0.00 0.98
2342 2398 7.349859 TCCTCTAGAATTGAAGCCCCTTTATAA 59.650 37.037 0.00 0.00 0.00 0.98
2343 2399 7.663493 CCTCTAGAATTGAAGCCCCTTTATAAG 59.337 40.741 0.00 0.00 0.00 1.73
2365 2421 2.427095 GGTATCAACACCCCTTTCATGC 59.573 50.000 0.00 0.00 31.91 4.06
2366 2422 1.560505 ATCAACACCCCTTTCATGCC 58.439 50.000 0.00 0.00 0.00 4.40
2367 2423 0.187117 TCAACACCCCTTTCATGCCA 59.813 50.000 0.00 0.00 0.00 4.92
2368 2424 1.203162 TCAACACCCCTTTCATGCCAT 60.203 47.619 0.00 0.00 0.00 4.40
2369 2425 1.205417 CAACACCCCTTTCATGCCATC 59.795 52.381 0.00 0.00 0.00 3.51
2370 2426 0.324645 ACACCCCTTTCATGCCATCC 60.325 55.000 0.00 0.00 0.00 3.51
2371 2427 1.076777 ACCCCTTTCATGCCATCCG 60.077 57.895 0.00 0.00 0.00 4.18
2372 2428 1.076777 CCCCTTTCATGCCATCCGT 60.077 57.895 0.00 0.00 0.00 4.69
2373 2429 1.386525 CCCCTTTCATGCCATCCGTG 61.387 60.000 0.00 0.00 0.00 4.94
2374 2430 0.680921 CCCTTTCATGCCATCCGTGT 60.681 55.000 0.00 0.00 0.00 4.49
2375 2431 0.452987 CCTTTCATGCCATCCGTGTG 59.547 55.000 0.00 0.00 0.00 3.82
2376 2432 1.167851 CTTTCATGCCATCCGTGTGT 58.832 50.000 0.00 0.00 0.00 3.72
2377 2433 2.355197 CTTTCATGCCATCCGTGTGTA 58.645 47.619 0.00 0.00 0.00 2.90
2378 2434 2.481289 TTCATGCCATCCGTGTGTAA 57.519 45.000 0.00 0.00 0.00 2.41
2379 2435 2.708216 TCATGCCATCCGTGTGTAAT 57.292 45.000 0.00 0.00 0.00 1.89
2380 2436 2.560504 TCATGCCATCCGTGTGTAATC 58.439 47.619 0.00 0.00 0.00 1.75
2381 2437 1.261354 CATGCCATCCGTGTGTAATCG 59.739 52.381 0.00 0.00 0.00 3.34
2382 2438 0.533032 TGCCATCCGTGTGTAATCGA 59.467 50.000 0.00 0.00 0.00 3.59
2383 2439 1.138069 TGCCATCCGTGTGTAATCGAT 59.862 47.619 0.00 0.00 0.00 3.59
2384 2440 1.792949 GCCATCCGTGTGTAATCGATC 59.207 52.381 0.00 0.00 0.00 3.69
2385 2441 2.801699 GCCATCCGTGTGTAATCGATCA 60.802 50.000 0.00 0.00 0.00 2.92
2386 2442 2.794910 CCATCCGTGTGTAATCGATCAC 59.205 50.000 9.67 9.67 35.43 3.06
2387 2443 3.443976 CATCCGTGTGTAATCGATCACA 58.556 45.455 14.13 14.13 41.37 3.58
2393 2449 4.736126 TGTGTAATCGATCACACCATCT 57.264 40.909 25.53 0.00 43.54 2.90
2394 2450 5.845391 TGTGTAATCGATCACACCATCTA 57.155 39.130 25.53 7.00 43.54 1.98
2395 2451 5.831997 TGTGTAATCGATCACACCATCTAG 58.168 41.667 25.53 0.00 43.54 2.43
2396 2452 5.359860 TGTGTAATCGATCACACCATCTAGT 59.640 40.000 25.53 0.00 43.54 2.57
2397 2453 6.127451 TGTGTAATCGATCACACCATCTAGTT 60.127 38.462 25.53 0.00 43.54 2.24
2398 2454 6.757010 GTGTAATCGATCACACCATCTAGTTT 59.243 38.462 19.46 0.00 39.30 2.66
2399 2455 6.978659 TGTAATCGATCACACCATCTAGTTTC 59.021 38.462 0.00 0.00 0.00 2.78
2400 2456 4.386867 TCGATCACACCATCTAGTTTCC 57.613 45.455 0.00 0.00 0.00 3.13
2401 2457 3.767131 TCGATCACACCATCTAGTTTCCA 59.233 43.478 0.00 0.00 0.00 3.53
2402 2458 4.405680 TCGATCACACCATCTAGTTTCCAT 59.594 41.667 0.00 0.00 0.00 3.41
2403 2459 5.596772 TCGATCACACCATCTAGTTTCCATA 59.403 40.000 0.00 0.00 0.00 2.74
2404 2460 5.923114 CGATCACACCATCTAGTTTCCATAG 59.077 44.000 0.00 0.00 0.00 2.23
2405 2461 6.461648 CGATCACACCATCTAGTTTCCATAGT 60.462 42.308 0.00 0.00 0.00 2.12
2406 2462 7.255486 CGATCACACCATCTAGTTTCCATAGTA 60.255 40.741 0.00 0.00 0.00 1.82
2407 2463 7.108841 TCACACCATCTAGTTTCCATAGTAC 57.891 40.000 0.00 0.00 0.00 2.73
2408 2464 6.097839 TCACACCATCTAGTTTCCATAGTACC 59.902 42.308 0.00 0.00 0.00 3.34
2409 2465 5.962031 ACACCATCTAGTTTCCATAGTACCA 59.038 40.000 0.00 0.00 0.00 3.25
2410 2466 6.442564 ACACCATCTAGTTTCCATAGTACCAA 59.557 38.462 0.00 0.00 0.00 3.67
2411 2467 7.127339 ACACCATCTAGTTTCCATAGTACCAAT 59.873 37.037 0.00 0.00 0.00 3.16
2412 2468 8.647796 CACCATCTAGTTTCCATAGTACCAATA 58.352 37.037 0.00 0.00 0.00 1.90
2413 2469 8.648693 ACCATCTAGTTTCCATAGTACCAATAC 58.351 37.037 0.00 0.00 0.00 1.89
2414 2470 8.095169 CCATCTAGTTTCCATAGTACCAATACC 58.905 40.741 0.00 0.00 30.88 2.73
2415 2471 8.647796 CATCTAGTTTCCATAGTACCAATACCA 58.352 37.037 0.00 0.00 30.88 3.25
2416 2472 8.612486 TCTAGTTTCCATAGTACCAATACCAA 57.388 34.615 0.00 0.00 30.88 3.67
2417 2473 9.220906 TCTAGTTTCCATAGTACCAATACCAAT 57.779 33.333 0.00 0.00 30.88 3.16
2418 2474 9.273016 CTAGTTTCCATAGTACCAATACCAATG 57.727 37.037 0.00 0.00 30.88 2.82
2419 2475 7.639378 AGTTTCCATAGTACCAATACCAATGT 58.361 34.615 0.00 0.00 30.88 2.71
2420 2476 8.113462 AGTTTCCATAGTACCAATACCAATGTT 58.887 33.333 0.00 0.00 30.88 2.71
2421 2477 9.398538 GTTTCCATAGTACCAATACCAATGTTA 57.601 33.333 0.00 0.00 30.88 2.41
2422 2478 9.976776 TTTCCATAGTACCAATACCAATGTTAA 57.023 29.630 0.00 0.00 30.88 2.01
2423 2479 9.976776 TTCCATAGTACCAATACCAATGTTAAA 57.023 29.630 0.00 0.00 30.88 1.52
2430 2486 9.528018 GTACCAATACCAATGTTAAATTGATGG 57.472 33.333 0.00 2.96 30.77 3.51
2431 2487 7.047271 ACCAATACCAATGTTAAATTGATGGC 58.953 34.615 0.00 0.00 30.77 4.40
2432 2488 6.482973 CCAATACCAATGTTAAATTGATGGCC 59.517 38.462 0.00 0.00 30.77 5.36
2433 2489 4.486125 ACCAATGTTAAATTGATGGCCC 57.514 40.909 0.00 0.00 0.00 5.80
2434 2490 3.199727 ACCAATGTTAAATTGATGGCCCC 59.800 43.478 0.00 0.00 0.00 5.80
2435 2491 3.456280 CAATGTTAAATTGATGGCCCCG 58.544 45.455 0.00 0.00 0.00 5.73
2436 2492 0.820871 TGTTAAATTGATGGCCCCGC 59.179 50.000 0.00 0.00 0.00 6.13
2437 2493 0.820871 GTTAAATTGATGGCCCCGCA 59.179 50.000 0.00 0.00 0.00 5.69
2438 2494 1.205893 GTTAAATTGATGGCCCCGCAA 59.794 47.619 0.00 1.86 0.00 4.85
2439 2495 1.561643 TAAATTGATGGCCCCGCAAA 58.438 45.000 0.00 0.00 0.00 3.68
2440 2496 0.689623 AAATTGATGGCCCCGCAAAA 59.310 45.000 0.00 0.00 0.00 2.44
2441 2497 0.689623 AATTGATGGCCCCGCAAAAA 59.310 45.000 0.00 0.00 0.00 1.94
2465 2521 8.674263 AAAAATGTTAAATTGATGAAGGCACA 57.326 26.923 0.00 0.00 0.00 4.57
2466 2522 7.894376 AAATGTTAAATTGATGAAGGCACAG 57.106 32.000 0.00 0.00 0.00 3.66
2467 2523 6.839124 ATGTTAAATTGATGAAGGCACAGA 57.161 33.333 0.00 0.00 0.00 3.41
2468 2524 6.647334 TGTTAAATTGATGAAGGCACAGAA 57.353 33.333 0.00 0.00 0.00 3.02
2469 2525 6.680810 TGTTAAATTGATGAAGGCACAGAAG 58.319 36.000 0.00 0.00 0.00 2.85
2470 2526 6.489700 TGTTAAATTGATGAAGGCACAGAAGA 59.510 34.615 0.00 0.00 0.00 2.87
2471 2527 7.014134 TGTTAAATTGATGAAGGCACAGAAGAA 59.986 33.333 0.00 0.00 0.00 2.52
2472 2528 6.409524 AAATTGATGAAGGCACAGAAGAAA 57.590 33.333 0.00 0.00 0.00 2.52
2473 2529 4.836125 TTGATGAAGGCACAGAAGAAAC 57.164 40.909 0.00 0.00 0.00 2.78
2474 2530 4.090761 TGATGAAGGCACAGAAGAAACT 57.909 40.909 0.00 0.00 0.00 2.66
2475 2531 3.817084 TGATGAAGGCACAGAAGAAACTG 59.183 43.478 0.00 0.00 42.78 3.16
2476 2532 2.575532 TGAAGGCACAGAAGAAACTGG 58.424 47.619 0.00 0.00 41.59 4.00
2477 2533 2.092429 TGAAGGCACAGAAGAAACTGGT 60.092 45.455 0.00 0.00 41.59 4.00
2478 2534 2.262423 AGGCACAGAAGAAACTGGTC 57.738 50.000 0.00 0.00 41.59 4.02
2479 2535 1.490490 AGGCACAGAAGAAACTGGTCA 59.510 47.619 0.00 0.00 41.59 4.02
2480 2536 1.604278 GGCACAGAAGAAACTGGTCAC 59.396 52.381 0.00 0.00 41.59 3.67
2481 2537 2.288666 GCACAGAAGAAACTGGTCACA 58.711 47.619 0.00 0.00 41.59 3.58
2496 2552 3.393089 GTCACAGACCATGTTGAGTCT 57.607 47.619 0.00 0.00 44.12 3.24
2511 2567 4.478843 TGAGTCTGTCAACGTGTACTAC 57.521 45.455 0.00 0.00 29.64 2.73
2512 2568 3.251729 TGAGTCTGTCAACGTGTACTACC 59.748 47.826 0.00 0.00 29.64 3.18
2513 2569 3.484407 AGTCTGTCAACGTGTACTACCT 58.516 45.455 0.00 0.00 0.00 3.08
2514 2570 3.887716 AGTCTGTCAACGTGTACTACCTT 59.112 43.478 0.00 0.00 0.00 3.50
2515 2571 4.340381 AGTCTGTCAACGTGTACTACCTTT 59.660 41.667 0.00 0.00 0.00 3.11
2516 2572 4.443394 GTCTGTCAACGTGTACTACCTTTG 59.557 45.833 0.00 0.00 0.00 2.77
2517 2573 4.098349 TCTGTCAACGTGTACTACCTTTGT 59.902 41.667 0.00 0.00 0.00 2.83
2518 2574 4.757594 TGTCAACGTGTACTACCTTTGTT 58.242 39.130 0.00 0.00 0.00 2.83
2519 2575 4.805192 TGTCAACGTGTACTACCTTTGTTC 59.195 41.667 0.00 0.00 0.00 3.18
2520 2576 4.209911 GTCAACGTGTACTACCTTTGTTCC 59.790 45.833 0.00 0.00 0.00 3.62
2521 2577 4.099881 TCAACGTGTACTACCTTTGTTCCT 59.900 41.667 0.00 0.00 0.00 3.36
2522 2578 5.301551 TCAACGTGTACTACCTTTGTTCCTA 59.698 40.000 0.00 0.00 0.00 2.94
2523 2579 5.789643 ACGTGTACTACCTTTGTTCCTAA 57.210 39.130 0.00 0.00 0.00 2.69
2524 2580 6.160576 ACGTGTACTACCTTTGTTCCTAAA 57.839 37.500 0.00 0.00 0.00 1.85
2525 2581 6.762333 ACGTGTACTACCTTTGTTCCTAAAT 58.238 36.000 0.00 0.00 0.00 1.40
2526 2582 7.895759 ACGTGTACTACCTTTGTTCCTAAATA 58.104 34.615 0.00 0.00 0.00 1.40
2527 2583 8.534496 ACGTGTACTACCTTTGTTCCTAAATAT 58.466 33.333 0.00 0.00 0.00 1.28
2552 2608 9.723601 ATAATATGTTTTGGCAGTTCAAATTGT 57.276 25.926 0.00 0.00 36.63 2.71
2554 2610 9.553064 AATATGTTTTGGCAGTTCAAATTGTAA 57.447 25.926 0.00 0.00 36.63 2.41
2555 2611 9.723601 ATATGTTTTGGCAGTTCAAATTGTAAT 57.276 25.926 0.00 0.00 36.63 1.89
2556 2612 7.475771 TGTTTTGGCAGTTCAAATTGTAATC 57.524 32.000 0.00 0.00 36.63 1.75
2557 2613 6.199908 TGTTTTGGCAGTTCAAATTGTAATCG 59.800 34.615 0.00 0.00 36.63 3.34
2558 2614 3.832276 TGGCAGTTCAAATTGTAATCGC 58.168 40.909 0.00 0.00 0.00 4.58
2559 2615 3.254411 TGGCAGTTCAAATTGTAATCGCA 59.746 39.130 0.00 0.00 0.00 5.10
2560 2616 4.082300 TGGCAGTTCAAATTGTAATCGCAT 60.082 37.500 0.00 0.00 0.00 4.73
2561 2617 5.124617 TGGCAGTTCAAATTGTAATCGCATA 59.875 36.000 0.00 0.00 0.00 3.14
2562 2618 5.455525 GGCAGTTCAAATTGTAATCGCATAC 59.544 40.000 0.00 0.00 0.00 2.39
2563 2619 5.455525 GCAGTTCAAATTGTAATCGCATACC 59.544 40.000 0.00 0.00 0.00 2.73
2564 2620 6.677920 GCAGTTCAAATTGTAATCGCATACCT 60.678 38.462 0.00 0.00 0.00 3.08
2565 2621 6.688385 CAGTTCAAATTGTAATCGCATACCTG 59.312 38.462 0.00 0.00 0.00 4.00
2566 2622 6.597672 AGTTCAAATTGTAATCGCATACCTGA 59.402 34.615 0.00 0.00 0.00 3.86
2567 2623 6.993786 TCAAATTGTAATCGCATACCTGAA 57.006 33.333 0.00 0.00 0.00 3.02
2568 2624 7.015226 TCAAATTGTAATCGCATACCTGAAG 57.985 36.000 0.00 0.00 0.00 3.02
2569 2625 6.597672 TCAAATTGTAATCGCATACCTGAAGT 59.402 34.615 0.00 0.00 0.00 3.01
2570 2626 6.604735 AATTGTAATCGCATACCTGAAGTC 57.395 37.500 0.00 0.00 0.00 3.01
2571 2627 5.339008 TTGTAATCGCATACCTGAAGTCT 57.661 39.130 0.00 0.00 0.00 3.24
2572 2628 6.459670 TTGTAATCGCATACCTGAAGTCTA 57.540 37.500 0.00 0.00 0.00 2.59
2573 2629 6.459670 TGTAATCGCATACCTGAAGTCTAA 57.540 37.500 0.00 0.00 0.00 2.10
2574 2630 6.869695 TGTAATCGCATACCTGAAGTCTAAA 58.130 36.000 0.00 0.00 0.00 1.85
2575 2631 7.497595 TGTAATCGCATACCTGAAGTCTAAAT 58.502 34.615 0.00 0.00 0.00 1.40
2576 2632 7.985184 TGTAATCGCATACCTGAAGTCTAAATT 59.015 33.333 0.00 0.00 0.00 1.82
2577 2633 6.851222 ATCGCATACCTGAAGTCTAAATTG 57.149 37.500 0.00 0.00 0.00 2.32
2578 2634 5.730550 TCGCATACCTGAAGTCTAAATTGT 58.269 37.500 0.00 0.00 0.00 2.71
2579 2635 6.869695 TCGCATACCTGAAGTCTAAATTGTA 58.130 36.000 0.00 0.00 0.00 2.41
2580 2636 6.755141 TCGCATACCTGAAGTCTAAATTGTAC 59.245 38.462 0.00 0.00 0.00 2.90
2581 2637 6.533723 CGCATACCTGAAGTCTAAATTGTACA 59.466 38.462 0.00 0.00 0.00 2.90
2582 2638 7.254117 CGCATACCTGAAGTCTAAATTGTACAG 60.254 40.741 0.00 0.00 0.00 2.74
2583 2639 7.549488 GCATACCTGAAGTCTAAATTGTACAGT 59.451 37.037 0.00 0.00 0.00 3.55
2584 2640 9.436957 CATACCTGAAGTCTAAATTGTACAGTT 57.563 33.333 0.00 0.00 0.00 3.16
2587 2643 9.269453 ACCTGAAGTCTAAATTGTACAGTTTAC 57.731 33.333 16.92 12.30 0.00 2.01
2588 2644 9.268268 CCTGAAGTCTAAATTGTACAGTTTACA 57.732 33.333 16.92 12.66 0.00 2.41
2618 2674 6.739112 TGATAGTCTGTTTGATACTCCATCG 58.261 40.000 0.00 0.00 36.33 3.84
2619 2675 6.321435 TGATAGTCTGTTTGATACTCCATCGT 59.679 38.462 0.00 0.00 36.33 3.73
2620 2676 7.501225 TGATAGTCTGTTTGATACTCCATCGTA 59.499 37.037 0.00 0.00 36.33 3.43
2621 2677 6.525578 AGTCTGTTTGATACTCCATCGTAA 57.474 37.500 0.00 0.00 36.33 3.18
2622 2678 6.931838 AGTCTGTTTGATACTCCATCGTAAA 58.068 36.000 0.00 0.00 36.33 2.01
2623 2679 7.036220 AGTCTGTTTGATACTCCATCGTAAAG 58.964 38.462 0.00 0.00 36.33 1.85
2624 2680 7.033791 GTCTGTTTGATACTCCATCGTAAAGA 58.966 38.462 0.00 0.00 36.33 2.52
2625 2681 7.544566 GTCTGTTTGATACTCCATCGTAAAGAA 59.455 37.037 0.00 0.00 36.33 2.52
2626 2682 8.092068 TCTGTTTGATACTCCATCGTAAAGAAA 58.908 33.333 0.00 0.00 36.33 2.52
2627 2683 8.786826 TGTTTGATACTCCATCGTAAAGAAAT 57.213 30.769 0.00 0.00 36.33 2.17
2628 2684 9.878667 TGTTTGATACTCCATCGTAAAGAAATA 57.121 29.630 0.00 0.00 36.33 1.40
2652 2708 4.385244 AAAGTGTTTCGATCACTAACGC 57.615 40.909 19.20 11.85 44.03 4.84
2653 2709 3.299340 AGTGTTTCGATCACTAACGCT 57.701 42.857 18.00 12.88 43.17 5.07
2654 2710 3.243336 AGTGTTTCGATCACTAACGCTC 58.757 45.455 18.00 1.83 43.17 5.03
2655 2711 3.057456 AGTGTTTCGATCACTAACGCTCT 60.057 43.478 18.00 3.67 43.17 4.09
2656 2712 3.673809 GTGTTTCGATCACTAACGCTCTT 59.326 43.478 12.11 0.00 33.59 2.85
2657 2713 4.855388 GTGTTTCGATCACTAACGCTCTTA 59.145 41.667 12.11 0.00 33.59 2.10
2658 2714 5.515626 GTGTTTCGATCACTAACGCTCTTAT 59.484 40.000 12.11 0.00 33.59 1.73
2659 2715 6.690098 GTGTTTCGATCACTAACGCTCTTATA 59.310 38.462 12.11 0.00 33.59 0.98
2660 2716 7.378995 GTGTTTCGATCACTAACGCTCTTATAT 59.621 37.037 12.11 0.00 33.59 0.86
2661 2717 7.919091 TGTTTCGATCACTAACGCTCTTATATT 59.081 33.333 0.00 0.00 0.00 1.28
2662 2718 8.753175 GTTTCGATCACTAACGCTCTTATATTT 58.247 33.333 0.00 0.00 0.00 1.40
2663 2719 8.503486 TTCGATCACTAACGCTCTTATATTTC 57.497 34.615 0.00 0.00 0.00 2.17
2664 2720 7.872881 TCGATCACTAACGCTCTTATATTTCT 58.127 34.615 0.00 0.00 0.00 2.52
2665 2721 8.350722 TCGATCACTAACGCTCTTATATTTCTT 58.649 33.333 0.00 0.00 0.00 2.52
2666 2722 8.969267 CGATCACTAACGCTCTTATATTTCTTT 58.031 33.333 0.00 0.00 0.00 2.52
2669 2725 9.229784 TCACTAACGCTCTTATATTTCTTTACG 57.770 33.333 0.00 0.00 0.00 3.18
2670 2726 8.477709 CACTAACGCTCTTATATTTCTTTACGG 58.522 37.037 0.00 0.00 0.00 4.02
2671 2727 8.408601 ACTAACGCTCTTATATTTCTTTACGGA 58.591 33.333 0.00 0.00 0.00 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 9.651718 GAATTTCACTATTTTGAATACGCCTAG 57.348 33.333 0.00 0.00 35.42 3.02
289 290 6.867519 TGTATCATCCACCTTCAAGAACTA 57.132 37.500 0.00 0.00 0.00 2.24
431 435 9.777843 GATTTATTTCAAGCAAACGTGTTTTAG 57.222 29.630 0.00 0.00 0.00 1.85
624 633 6.918022 CACACAAAGGTTTCAAAGTTAGATCC 59.082 38.462 0.00 0.00 0.00 3.36
697 706 5.852827 AGCTAACAATATCTGAGGAGCTTC 58.147 41.667 0.00 0.00 35.66 3.86
813 823 6.262944 GTCATGCCAAATGATCATACCAAGTA 59.737 38.462 9.04 0.00 0.00 2.24
824 834 7.491048 GGTAAATAAAACGTCATGCCAAATGAT 59.509 33.333 0.00 0.00 0.00 2.45
1086 1100 2.094597 TGCTTGCGCTTCTGCATTTATT 60.095 40.909 9.73 0.00 45.78 1.40
1307 1325 9.249457 CATCTAAATTAACATCTGACGAGCTAA 57.751 33.333 0.00 0.00 0.00 3.09
1571 1589 7.989170 ACATATCTTTCTCAATACAGCACATGA 59.011 33.333 0.00 0.00 0.00 3.07
1724 1743 2.492881 TCCATCCACAAATGTGCATCAC 59.507 45.455 8.03 0.00 44.34 3.06
1733 1752 3.370953 GCTCTACCAGTCCATCCACAAAT 60.371 47.826 0.00 0.00 0.00 2.32
1816 1850 3.054287 TCCAACAACCCACAAGTCTTGTA 60.054 43.478 17.76 0.00 43.23 2.41
2025 2081 2.930826 AATCAACACTCAAGGTCGGT 57.069 45.000 0.00 0.00 0.00 4.69
2029 2085 7.861629 TCTCCATATTAATCAACACTCAAGGT 58.138 34.615 0.00 0.00 0.00 3.50
2048 2104 8.200120 CGTACACCATGAATATATGATCTCCAT 58.800 37.037 0.00 0.00 39.25 3.41
2049 2105 7.178451 ACGTACACCATGAATATATGATCTCCA 59.822 37.037 0.00 0.00 0.00 3.86
2050 2106 7.548097 ACGTACACCATGAATATATGATCTCC 58.452 38.462 0.00 0.00 0.00 3.71
2051 2107 8.462811 AGACGTACACCATGAATATATGATCTC 58.537 37.037 0.00 0.00 0.00 2.75
2052 2108 8.246871 CAGACGTACACCATGAATATATGATCT 58.753 37.037 0.00 0.00 0.00 2.75
2053 2109 7.489435 CCAGACGTACACCATGAATATATGATC 59.511 40.741 0.00 0.00 0.00 2.92
2054 2110 7.323420 CCAGACGTACACCATGAATATATGAT 58.677 38.462 0.00 0.00 0.00 2.45
2055 2111 6.295067 CCCAGACGTACACCATGAATATATGA 60.295 42.308 0.00 0.00 0.00 2.15
2056 2112 5.869344 CCCAGACGTACACCATGAATATATG 59.131 44.000 0.00 0.00 0.00 1.78
2057 2113 5.542635 ACCCAGACGTACACCATGAATATAT 59.457 40.000 0.00 0.00 0.00 0.86
2058 2114 4.897076 ACCCAGACGTACACCATGAATATA 59.103 41.667 0.00 0.00 0.00 0.86
2059 2115 3.709653 ACCCAGACGTACACCATGAATAT 59.290 43.478 0.00 0.00 0.00 1.28
2060 2116 3.101437 ACCCAGACGTACACCATGAATA 58.899 45.455 0.00 0.00 0.00 1.75
2061 2117 1.906574 ACCCAGACGTACACCATGAAT 59.093 47.619 0.00 0.00 0.00 2.57
2062 2118 1.001520 CACCCAGACGTACACCATGAA 59.998 52.381 0.00 0.00 0.00 2.57
2063 2119 0.606096 CACCCAGACGTACACCATGA 59.394 55.000 0.00 0.00 0.00 3.07
2064 2120 0.320374 ACACCCAGACGTACACCATG 59.680 55.000 0.00 0.00 0.00 3.66
2065 2121 1.053424 AACACCCAGACGTACACCAT 58.947 50.000 0.00 0.00 0.00 3.55
2066 2122 1.340889 GTAACACCCAGACGTACACCA 59.659 52.381 0.00 0.00 0.00 4.17
2067 2123 1.337167 GGTAACACCCAGACGTACACC 60.337 57.143 0.00 0.00 30.04 4.16
2068 2124 1.340889 TGGTAACACCCAGACGTACAC 59.659 52.381 0.00 0.00 46.17 2.90
2069 2125 1.702182 TGGTAACACCCAGACGTACA 58.298 50.000 0.00 0.00 46.17 2.90
2077 2133 1.663911 ATGGTAGCTGGTAACACCCA 58.336 50.000 6.78 1.64 46.17 4.51
2078 2134 2.290705 ACAATGGTAGCTGGTAACACCC 60.291 50.000 6.78 0.00 46.17 4.61
2079 2135 2.747446 CACAATGGTAGCTGGTAACACC 59.253 50.000 6.78 0.00 46.17 4.16
2080 2136 3.670625 TCACAATGGTAGCTGGTAACAC 58.329 45.455 6.78 0.00 46.17 3.32
2081 2137 7.899006 GTGTTTCACAATGGTAGCTGGTAACA 61.899 42.308 7.11 7.11 38.26 2.41
2082 2138 4.517453 TGTTTCACAATGGTAGCTGGTAAC 59.483 41.667 0.00 0.00 0.00 2.50
2083 2139 4.517453 GTGTTTCACAATGGTAGCTGGTAA 59.483 41.667 0.00 0.00 34.08 2.85
2084 2140 4.069304 GTGTTTCACAATGGTAGCTGGTA 58.931 43.478 0.00 0.00 34.08 3.25
2085 2141 2.884639 GTGTTTCACAATGGTAGCTGGT 59.115 45.455 0.00 0.00 34.08 4.00
2086 2142 2.095768 CGTGTTTCACAATGGTAGCTGG 60.096 50.000 0.00 0.00 33.40 4.85
2087 2143 2.805671 TCGTGTTTCACAATGGTAGCTG 59.194 45.455 0.00 0.00 33.40 4.24
2088 2144 3.120321 TCGTGTTTCACAATGGTAGCT 57.880 42.857 0.00 0.00 33.40 3.32
2089 2145 3.435327 TCATCGTGTTTCACAATGGTAGC 59.565 43.478 1.83 0.00 33.40 3.58
2090 2146 4.690748 ACTCATCGTGTTTCACAATGGTAG 59.309 41.667 1.83 0.00 33.40 3.18
2091 2147 4.450757 CACTCATCGTGTTTCACAATGGTA 59.549 41.667 1.83 0.00 38.84 3.25
2092 2148 3.250762 CACTCATCGTGTTTCACAATGGT 59.749 43.478 1.83 0.00 38.84 3.55
2093 2149 3.498018 TCACTCATCGTGTTTCACAATGG 59.502 43.478 1.83 0.00 44.16 3.16
2094 2150 4.730600 TCACTCATCGTGTTTCACAATG 57.269 40.909 1.00 0.00 44.16 2.82
2095 2151 4.154737 CCATCACTCATCGTGTTTCACAAT 59.845 41.667 1.00 0.00 44.16 2.71
2096 2152 3.498018 CCATCACTCATCGTGTTTCACAA 59.502 43.478 1.00 0.00 44.16 3.33
2097 2153 3.066380 CCATCACTCATCGTGTTTCACA 58.934 45.455 1.00 0.00 44.16 3.58
2098 2154 3.067106 ACCATCACTCATCGTGTTTCAC 58.933 45.455 0.00 0.00 44.16 3.18
2099 2155 3.066380 CACCATCACTCATCGTGTTTCA 58.934 45.455 0.00 0.00 44.16 2.69
2100 2156 2.416547 CCACCATCACTCATCGTGTTTC 59.583 50.000 0.00 0.00 44.16 2.78
2101 2157 2.426522 CCACCATCACTCATCGTGTTT 58.573 47.619 0.00 0.00 44.16 2.83
2102 2158 1.945819 GCCACCATCACTCATCGTGTT 60.946 52.381 0.00 0.00 44.16 3.32
2103 2159 0.391661 GCCACCATCACTCATCGTGT 60.392 55.000 0.00 0.00 44.16 4.49
2104 2160 0.107993 AGCCACCATCACTCATCGTG 60.108 55.000 0.00 0.00 45.18 4.35
2105 2161 1.137086 GTAGCCACCATCACTCATCGT 59.863 52.381 0.00 0.00 0.00 3.73
2106 2162 1.136891 TGTAGCCACCATCACTCATCG 59.863 52.381 0.00 0.00 0.00 3.84
2107 2163 2.988010 TGTAGCCACCATCACTCATC 57.012 50.000 0.00 0.00 0.00 2.92
2108 2164 2.224137 CGATGTAGCCACCATCACTCAT 60.224 50.000 8.15 0.00 38.90 2.90
2109 2165 1.136891 CGATGTAGCCACCATCACTCA 59.863 52.381 8.15 0.00 38.90 3.41
2110 2166 1.137086 ACGATGTAGCCACCATCACTC 59.863 52.381 8.15 0.00 38.90 3.51
2111 2167 1.134699 CACGATGTAGCCACCATCACT 60.135 52.381 8.15 0.00 38.90 3.41
2112 2168 1.290203 CACGATGTAGCCACCATCAC 58.710 55.000 8.15 0.00 38.90 3.06
2113 2169 0.177836 CCACGATGTAGCCACCATCA 59.822 55.000 8.15 0.00 38.90 3.07
2114 2170 0.178068 ACCACGATGTAGCCACCATC 59.822 55.000 0.00 0.00 36.25 3.51
2115 2171 0.618458 AACCACGATGTAGCCACCAT 59.382 50.000 0.00 0.00 0.00 3.55
2116 2172 0.321210 CAACCACGATGTAGCCACCA 60.321 55.000 0.00 0.00 0.00 4.17
2117 2173 1.024579 CCAACCACGATGTAGCCACC 61.025 60.000 0.00 0.00 0.00 4.61
2118 2174 1.024579 CCCAACCACGATGTAGCCAC 61.025 60.000 0.00 0.00 0.00 5.01
2119 2175 1.298340 CCCAACCACGATGTAGCCA 59.702 57.895 0.00 0.00 0.00 4.75
2120 2176 0.322187 AACCCAACCACGATGTAGCC 60.322 55.000 0.00 0.00 0.00 3.93
2121 2177 0.802494 CAACCCAACCACGATGTAGC 59.198 55.000 0.00 0.00 0.00 3.58
2122 2178 1.271163 ACCAACCCAACCACGATGTAG 60.271 52.381 0.00 0.00 0.00 2.74
2123 2179 0.766131 ACCAACCCAACCACGATGTA 59.234 50.000 0.00 0.00 0.00 2.29
2124 2180 0.821711 CACCAACCCAACCACGATGT 60.822 55.000 0.00 0.00 0.00 3.06
2125 2181 1.523154 CCACCAACCCAACCACGATG 61.523 60.000 0.00 0.00 0.00 3.84
2126 2182 1.228429 CCACCAACCCAACCACGAT 60.228 57.895 0.00 0.00 0.00 3.73
2127 2183 2.193517 CCACCAACCCAACCACGA 59.806 61.111 0.00 0.00 0.00 4.35
2128 2184 1.730451 GAACCACCAACCCAACCACG 61.730 60.000 0.00 0.00 0.00 4.94
2129 2185 1.730451 CGAACCACCAACCCAACCAC 61.730 60.000 0.00 0.00 0.00 4.16
2130 2186 1.454111 CGAACCACCAACCCAACCA 60.454 57.895 0.00 0.00 0.00 3.67
2131 2187 2.852180 GCGAACCACCAACCCAACC 61.852 63.158 0.00 0.00 0.00 3.77
2132 2188 2.725641 GCGAACCACCAACCCAAC 59.274 61.111 0.00 0.00 0.00 3.77
2133 2189 2.519780 GGCGAACCACCAACCCAA 60.520 61.111 0.00 0.00 35.26 4.12
2134 2190 3.810188 TGGCGAACCACCAACCCA 61.810 61.111 0.00 0.00 42.67 4.51
2148 2204 2.288825 TGGTAGCGCTATATGTCTTGGC 60.289 50.000 21.96 2.99 0.00 4.52
2149 2205 3.660501 TGGTAGCGCTATATGTCTTGG 57.339 47.619 21.96 0.00 0.00 3.61
2150 2206 4.809673 TCATGGTAGCGCTATATGTCTTG 58.190 43.478 28.56 19.63 0.00 3.02
2151 2207 4.081972 CCTCATGGTAGCGCTATATGTCTT 60.082 45.833 28.56 12.51 0.00 3.01
2152 2208 3.445450 CCTCATGGTAGCGCTATATGTCT 59.555 47.826 28.56 10.26 0.00 3.41
2153 2209 3.193691 ACCTCATGGTAGCGCTATATGTC 59.806 47.826 28.56 15.66 46.43 3.06
2154 2210 3.056536 CACCTCATGGTAGCGCTATATGT 60.057 47.826 28.56 16.45 46.60 2.29
2155 2211 3.193479 TCACCTCATGGTAGCGCTATATG 59.807 47.826 26.22 26.22 46.60 1.78
2156 2212 3.431415 TCACCTCATGGTAGCGCTATAT 58.569 45.455 21.96 15.16 46.60 0.86
2157 2213 2.871453 TCACCTCATGGTAGCGCTATA 58.129 47.619 21.96 13.43 46.60 1.31
2158 2214 1.704641 TCACCTCATGGTAGCGCTAT 58.295 50.000 21.96 2.17 46.60 2.97
2159 2215 1.613925 GATCACCTCATGGTAGCGCTA 59.386 52.381 14.45 14.45 46.60 4.26
2160 2216 0.390860 GATCACCTCATGGTAGCGCT 59.609 55.000 17.26 17.26 46.60 5.92
2161 2217 0.390860 AGATCACCTCATGGTAGCGC 59.609 55.000 0.00 0.00 46.60 5.92
2162 2218 1.000283 GGAGATCACCTCATGGTAGCG 60.000 57.143 1.33 0.00 46.60 4.26
2163 2219 2.042464 TGGAGATCACCTCATGGTAGC 58.958 52.381 10.73 0.00 46.60 3.58
2164 2220 5.328565 TCTATGGAGATCACCTCATGGTAG 58.671 45.833 10.73 4.12 46.60 3.18
2165 2221 5.339423 TCTATGGAGATCACCTCATGGTA 57.661 43.478 10.73 0.00 46.60 3.25
2167 2223 5.557576 TTTCTATGGAGATCACCTCATGG 57.442 43.478 10.73 0.00 43.76 3.66
2168 2224 7.674120 TGTATTTCTATGGAGATCACCTCATG 58.326 38.462 10.73 0.00 43.76 3.07
2169 2225 7.862274 TGTATTTCTATGGAGATCACCTCAT 57.138 36.000 10.73 0.00 43.76 2.90
2170 2226 7.256439 CCATGTATTTCTATGGAGATCACCTCA 60.256 40.741 10.73 0.00 45.32 3.86
2171 2227 7.038729 TCCATGTATTTCTATGGAGATCACCTC 60.039 40.741 10.73 0.00 45.87 3.85
2172 2228 6.789457 TCCATGTATTTCTATGGAGATCACCT 59.211 38.462 10.73 0.00 45.87 4.00
2173 2229 7.009179 TCCATGTATTTCTATGGAGATCACC 57.991 40.000 1.62 1.62 45.87 4.02
2181 2237 6.017605 GTGAACTGCTCCATGTATTTCTATGG 60.018 42.308 0.00 0.00 44.15 2.74
2182 2238 6.539826 TGTGAACTGCTCCATGTATTTCTATG 59.460 38.462 0.00 0.00 0.00 2.23
2183 2239 6.653020 TGTGAACTGCTCCATGTATTTCTAT 58.347 36.000 0.00 0.00 0.00 1.98
2184 2240 6.048732 TGTGAACTGCTCCATGTATTTCTA 57.951 37.500 0.00 0.00 0.00 2.10
2185 2241 4.910195 TGTGAACTGCTCCATGTATTTCT 58.090 39.130 0.00 0.00 0.00 2.52
2186 2242 4.437930 GCTGTGAACTGCTCCATGTATTTC 60.438 45.833 5.19 0.00 37.75 2.17
2187 2243 3.441572 GCTGTGAACTGCTCCATGTATTT 59.558 43.478 5.19 0.00 37.75 1.40
2188 2244 3.012518 GCTGTGAACTGCTCCATGTATT 58.987 45.455 5.19 0.00 37.75 1.89
2189 2245 2.636830 GCTGTGAACTGCTCCATGTAT 58.363 47.619 5.19 0.00 37.75 2.29
2190 2246 1.339055 GGCTGTGAACTGCTCCATGTA 60.339 52.381 11.41 0.00 40.16 2.29
2191 2247 0.607489 GGCTGTGAACTGCTCCATGT 60.607 55.000 11.41 0.00 40.16 3.21
2192 2248 1.642037 CGGCTGTGAACTGCTCCATG 61.642 60.000 11.41 0.00 40.16 3.66
2193 2249 1.376424 CGGCTGTGAACTGCTCCAT 60.376 57.895 11.41 0.00 40.16 3.41
2194 2250 2.031012 CGGCTGTGAACTGCTCCA 59.969 61.111 11.41 0.00 40.16 3.86
2195 2251 2.031163 ACGGCTGTGAACTGCTCC 59.969 61.111 0.00 0.00 40.16 4.70
2205 2261 3.543680 ATAGTGAATAAGCACGGCTGT 57.456 42.857 0.00 0.00 43.42 4.40
2206 2262 4.122776 AGAATAGTGAATAAGCACGGCTG 58.877 43.478 0.00 0.00 43.42 4.85
2207 2263 4.408182 AGAATAGTGAATAAGCACGGCT 57.592 40.909 0.00 0.00 43.42 5.52
2208 2264 4.811557 AGAAGAATAGTGAATAAGCACGGC 59.188 41.667 0.00 0.00 43.42 5.68
2209 2265 8.491152 CATTAGAAGAATAGTGAATAAGCACGG 58.509 37.037 0.00 0.00 43.42 4.94
2210 2266 9.035607 ACATTAGAAGAATAGTGAATAAGCACG 57.964 33.333 0.00 0.00 43.42 5.34
2220 2276 8.763356 GCAAGATGAGACATTAGAAGAATAGTG 58.237 37.037 0.00 0.00 0.00 2.74
2221 2277 8.481314 TGCAAGATGAGACATTAGAAGAATAGT 58.519 33.333 0.00 0.00 0.00 2.12
2222 2278 8.883954 TGCAAGATGAGACATTAGAAGAATAG 57.116 34.615 0.00 0.00 0.00 1.73
2226 2282 9.920133 GTATATGCAAGATGAGACATTAGAAGA 57.080 33.333 0.00 0.00 0.00 2.87
2227 2283 9.926158 AGTATATGCAAGATGAGACATTAGAAG 57.074 33.333 0.00 0.00 0.00 2.85
2229 2285 9.702494 CAAGTATATGCAAGATGAGACATTAGA 57.298 33.333 0.00 0.00 0.00 2.10
2230 2286 8.933807 CCAAGTATATGCAAGATGAGACATTAG 58.066 37.037 0.00 0.00 0.00 1.73
2231 2287 7.388776 GCCAAGTATATGCAAGATGAGACATTA 59.611 37.037 0.00 0.00 0.00 1.90
2232 2288 6.206243 GCCAAGTATATGCAAGATGAGACATT 59.794 38.462 0.00 0.00 0.00 2.71
2233 2289 5.704515 GCCAAGTATATGCAAGATGAGACAT 59.295 40.000 0.00 0.00 0.00 3.06
2234 2290 5.059161 GCCAAGTATATGCAAGATGAGACA 58.941 41.667 0.00 0.00 0.00 3.41
2235 2291 5.049818 GTGCCAAGTATATGCAAGATGAGAC 60.050 44.000 0.00 0.00 36.65 3.36
2236 2292 5.059161 GTGCCAAGTATATGCAAGATGAGA 58.941 41.667 0.00 0.00 36.65 3.27
2237 2293 4.084171 CGTGCCAAGTATATGCAAGATGAG 60.084 45.833 0.00 0.00 36.75 2.90
2238 2294 3.809279 CGTGCCAAGTATATGCAAGATGA 59.191 43.478 0.00 0.00 36.75 2.92
2239 2295 3.809279 TCGTGCCAAGTATATGCAAGATG 59.191 43.478 0.00 0.00 38.31 2.90
2240 2296 4.071961 TCGTGCCAAGTATATGCAAGAT 57.928 40.909 0.00 0.00 38.31 2.40
2241 2297 3.535280 TCGTGCCAAGTATATGCAAGA 57.465 42.857 0.00 0.00 40.34 3.02
2242 2298 4.614555 TTTCGTGCCAAGTATATGCAAG 57.385 40.909 0.00 0.00 36.65 4.01
2243 2299 5.339177 CATTTTCGTGCCAAGTATATGCAA 58.661 37.500 0.00 0.00 36.65 4.08
2244 2300 4.733230 GCATTTTCGTGCCAAGTATATGCA 60.733 41.667 7.48 0.00 39.18 3.96
2245 2301 3.730715 GCATTTTCGTGCCAAGTATATGC 59.269 43.478 0.00 0.00 39.18 3.14
2246 2302 4.919206 TGCATTTTCGTGCCAAGTATATG 58.081 39.130 0.00 0.00 44.43 1.78
2247 2303 4.640201 ACTGCATTTTCGTGCCAAGTATAT 59.360 37.500 0.00 0.00 44.43 0.86
2248 2304 4.006989 ACTGCATTTTCGTGCCAAGTATA 58.993 39.130 0.00 0.00 44.43 1.47
2249 2305 2.819608 ACTGCATTTTCGTGCCAAGTAT 59.180 40.909 0.00 0.00 44.43 2.12
2250 2306 2.031245 CACTGCATTTTCGTGCCAAGTA 60.031 45.455 0.00 0.00 44.43 2.24
2251 2307 1.032014 ACTGCATTTTCGTGCCAAGT 58.968 45.000 0.00 0.00 44.43 3.16
2252 2308 1.411394 CACTGCATTTTCGTGCCAAG 58.589 50.000 0.00 0.00 44.43 3.61
2253 2309 0.597118 GCACTGCATTTTCGTGCCAA 60.597 50.000 15.15 0.00 46.09 4.52
2254 2310 1.007502 GCACTGCATTTTCGTGCCA 60.008 52.632 15.15 0.00 46.09 4.92
2255 2311 3.846754 GCACTGCATTTTCGTGCC 58.153 55.556 15.15 0.51 46.09 5.01
2257 2313 4.082274 TCAATAGCACTGCATTTTCGTG 57.918 40.909 3.30 0.00 0.00 4.35
2258 2314 4.764679 TTCAATAGCACTGCATTTTCGT 57.235 36.364 3.30 0.00 0.00 3.85
2259 2315 5.334319 TGATTCAATAGCACTGCATTTTCG 58.666 37.500 3.30 0.00 0.00 3.46
2260 2316 7.490079 TGAATGATTCAATAGCACTGCATTTTC 59.510 33.333 5.21 2.71 36.59 2.29
2261 2317 7.324935 TGAATGATTCAATAGCACTGCATTTT 58.675 30.769 5.21 0.00 36.59 1.82
2262 2318 6.869695 TGAATGATTCAATAGCACTGCATTT 58.130 32.000 5.21 0.00 36.59 2.32
2263 2319 6.459670 TGAATGATTCAATAGCACTGCATT 57.540 33.333 5.21 0.00 36.59 3.56
2264 2320 6.459670 TTGAATGATTCAATAGCACTGCAT 57.540 33.333 16.04 0.00 44.21 3.96
2265 2321 5.900865 TTGAATGATTCAATAGCACTGCA 57.099 34.783 16.04 0.00 44.21 4.41
2276 2332 4.078537 ACGGGACATGTTTGAATGATTCA 58.921 39.130 3.29 3.29 38.04 2.57
2277 2333 4.701956 ACGGGACATGTTTGAATGATTC 57.298 40.909 0.00 0.00 0.00 2.52
2278 2334 4.096382 GCTACGGGACATGTTTGAATGATT 59.904 41.667 0.00 0.00 0.00 2.57
2279 2335 3.627577 GCTACGGGACATGTTTGAATGAT 59.372 43.478 0.00 0.00 0.00 2.45
2280 2336 3.006940 GCTACGGGACATGTTTGAATGA 58.993 45.455 0.00 0.00 0.00 2.57
2281 2337 2.746904 TGCTACGGGACATGTTTGAATG 59.253 45.455 0.00 0.00 0.00 2.67
2282 2338 3.066291 TGCTACGGGACATGTTTGAAT 57.934 42.857 0.00 0.00 0.00 2.57
2283 2339 2.550606 GTTGCTACGGGACATGTTTGAA 59.449 45.455 0.00 0.00 0.00 2.69
2284 2340 2.147958 GTTGCTACGGGACATGTTTGA 58.852 47.619 0.00 0.00 0.00 2.69
2285 2341 1.876799 TGTTGCTACGGGACATGTTTG 59.123 47.619 0.00 0.00 0.00 2.93
2286 2342 2.264005 TGTTGCTACGGGACATGTTT 57.736 45.000 0.00 0.00 0.00 2.83
2287 2343 2.264005 TTGTTGCTACGGGACATGTT 57.736 45.000 0.00 0.00 0.00 2.71
2288 2344 2.264005 TTTGTTGCTACGGGACATGT 57.736 45.000 0.00 0.00 0.00 3.21
2289 2345 3.848272 AATTTGTTGCTACGGGACATG 57.152 42.857 0.00 0.00 0.00 3.21
2290 2346 4.585879 ACTAATTTGTTGCTACGGGACAT 58.414 39.130 0.00 0.00 0.00 3.06
2291 2347 3.998341 GACTAATTTGTTGCTACGGGACA 59.002 43.478 0.00 0.00 0.00 4.02
2292 2348 3.998341 TGACTAATTTGTTGCTACGGGAC 59.002 43.478 0.00 0.00 0.00 4.46
2293 2349 4.274602 TGACTAATTTGTTGCTACGGGA 57.725 40.909 0.00 0.00 0.00 5.14
2294 2350 5.448632 GGATTGACTAATTTGTTGCTACGGG 60.449 44.000 0.00 0.00 0.00 5.28
2295 2351 5.354234 AGGATTGACTAATTTGTTGCTACGG 59.646 40.000 0.00 0.00 0.00 4.02
2296 2352 6.313905 AGAGGATTGACTAATTTGTTGCTACG 59.686 38.462 0.00 0.00 0.00 3.51
2297 2353 7.617041 AGAGGATTGACTAATTTGTTGCTAC 57.383 36.000 0.00 0.00 0.00 3.58
2298 2354 8.758829 TCTAGAGGATTGACTAATTTGTTGCTA 58.241 33.333 0.00 0.00 0.00 3.49
2299 2355 7.624549 TCTAGAGGATTGACTAATTTGTTGCT 58.375 34.615 0.00 0.00 0.00 3.91
2300 2356 7.849804 TCTAGAGGATTGACTAATTTGTTGC 57.150 36.000 0.00 0.00 0.00 4.17
2306 2362 9.336171 GCTTCAATTCTAGAGGATTGACTAATT 57.664 33.333 16.15 0.00 33.37 1.40
2307 2363 7.936301 GGCTTCAATTCTAGAGGATTGACTAAT 59.064 37.037 16.15 0.00 33.37 1.73
2308 2364 7.275920 GGCTTCAATTCTAGAGGATTGACTAA 58.724 38.462 16.15 5.14 33.37 2.24
2309 2365 6.183361 GGGCTTCAATTCTAGAGGATTGACTA 60.183 42.308 16.15 5.69 33.37 2.59
2310 2366 5.397334 GGGCTTCAATTCTAGAGGATTGACT 60.397 44.000 16.15 0.00 33.37 3.41
2311 2367 4.819088 GGGCTTCAATTCTAGAGGATTGAC 59.181 45.833 16.15 8.50 33.37 3.18
2312 2368 4.141390 GGGGCTTCAATTCTAGAGGATTGA 60.141 45.833 13.53 13.53 0.00 2.57
2313 2369 4.140536 GGGGCTTCAATTCTAGAGGATTG 58.859 47.826 9.90 9.90 0.00 2.67
2314 2370 4.050757 AGGGGCTTCAATTCTAGAGGATT 58.949 43.478 0.00 0.00 0.00 3.01
2315 2371 3.674477 AGGGGCTTCAATTCTAGAGGAT 58.326 45.455 0.00 0.00 0.00 3.24
2316 2372 3.136641 AGGGGCTTCAATTCTAGAGGA 57.863 47.619 0.00 0.00 0.00 3.71
2317 2373 3.941704 AAGGGGCTTCAATTCTAGAGG 57.058 47.619 0.00 0.00 0.00 3.69
2318 2374 7.663493 CCTTATAAAGGGGCTTCAATTCTAGAG 59.337 40.741 0.00 0.00 45.27 2.43
2319 2375 7.518188 CCTTATAAAGGGGCTTCAATTCTAGA 58.482 38.462 0.00 0.00 45.27 2.43
2320 2376 7.751768 CCTTATAAAGGGGCTTCAATTCTAG 57.248 40.000 0.00 0.00 45.27 2.43
2344 2400 2.427095 GCATGAAAGGGGTGTTGATACC 59.573 50.000 0.00 0.00 40.10 2.73
2345 2401 2.427095 GGCATGAAAGGGGTGTTGATAC 59.573 50.000 0.00 0.00 0.00 2.24
2346 2402 2.042297 TGGCATGAAAGGGGTGTTGATA 59.958 45.455 0.00 0.00 0.00 2.15
2347 2403 1.203162 TGGCATGAAAGGGGTGTTGAT 60.203 47.619 0.00 0.00 0.00 2.57
2348 2404 0.187117 TGGCATGAAAGGGGTGTTGA 59.813 50.000 0.00 0.00 0.00 3.18
2349 2405 1.205417 GATGGCATGAAAGGGGTGTTG 59.795 52.381 3.81 0.00 0.00 3.33
2350 2406 1.560505 GATGGCATGAAAGGGGTGTT 58.439 50.000 3.81 0.00 0.00 3.32
2351 2407 0.324645 GGATGGCATGAAAGGGGTGT 60.325 55.000 3.81 0.00 0.00 4.16
2352 2408 1.386525 CGGATGGCATGAAAGGGGTG 61.387 60.000 3.81 0.00 0.00 4.61
2353 2409 1.076777 CGGATGGCATGAAAGGGGT 60.077 57.895 3.81 0.00 0.00 4.95
2354 2410 1.076777 ACGGATGGCATGAAAGGGG 60.077 57.895 3.81 0.00 0.00 4.79
2355 2411 0.680921 ACACGGATGGCATGAAAGGG 60.681 55.000 3.81 0.00 0.00 3.95
2356 2412 0.452987 CACACGGATGGCATGAAAGG 59.547 55.000 3.81 0.00 0.00 3.11
2357 2413 1.167851 ACACACGGATGGCATGAAAG 58.832 50.000 3.81 0.00 0.00 2.62
2358 2414 2.481289 TACACACGGATGGCATGAAA 57.519 45.000 3.81 0.00 0.00 2.69
2359 2415 2.481289 TTACACACGGATGGCATGAA 57.519 45.000 3.81 0.00 0.00 2.57
2360 2416 2.560504 GATTACACACGGATGGCATGA 58.439 47.619 3.81 0.00 0.00 3.07
2361 2417 1.261354 CGATTACACACGGATGGCATG 59.739 52.381 3.81 0.00 0.00 4.06
2362 2418 1.138069 TCGATTACACACGGATGGCAT 59.862 47.619 0.00 0.00 0.00 4.40
2363 2419 0.533032 TCGATTACACACGGATGGCA 59.467 50.000 0.00 0.00 0.00 4.92
2364 2420 1.792949 GATCGATTACACACGGATGGC 59.207 52.381 0.00 0.00 0.00 4.40
2365 2421 2.794910 GTGATCGATTACACACGGATGG 59.205 50.000 14.88 0.00 37.05 3.51
2366 2422 3.443976 TGTGATCGATTACACACGGATG 58.556 45.455 18.14 0.00 41.19 3.51
2367 2423 3.793797 TGTGATCGATTACACACGGAT 57.206 42.857 18.14 0.00 41.19 4.18
2372 2428 4.736126 AGATGGTGTGATCGATTACACA 57.264 40.909 38.26 28.76 45.72 3.72
2373 2429 5.833082 ACTAGATGGTGTGATCGATTACAC 58.167 41.667 33.70 33.70 43.92 2.90
2374 2430 6.465439 AACTAGATGGTGTGATCGATTACA 57.535 37.500 18.14 18.14 0.00 2.41
2375 2431 6.421202 GGAAACTAGATGGTGTGATCGATTAC 59.579 42.308 13.08 13.08 0.00 1.89
2376 2432 6.097696 TGGAAACTAGATGGTGTGATCGATTA 59.902 38.462 0.00 0.00 0.00 1.75
2377 2433 5.104941 TGGAAACTAGATGGTGTGATCGATT 60.105 40.000 0.00 0.00 0.00 3.34
2378 2434 4.405680 TGGAAACTAGATGGTGTGATCGAT 59.594 41.667 0.00 0.00 0.00 3.59
2379 2435 3.767131 TGGAAACTAGATGGTGTGATCGA 59.233 43.478 0.00 0.00 0.00 3.59
2380 2436 4.123497 TGGAAACTAGATGGTGTGATCG 57.877 45.455 0.00 0.00 0.00 3.69
2381 2437 6.821388 ACTATGGAAACTAGATGGTGTGATC 58.179 40.000 0.00 0.00 0.00 2.92
2382 2438 6.814954 ACTATGGAAACTAGATGGTGTGAT 57.185 37.500 0.00 0.00 0.00 3.06
2383 2439 6.097839 GGTACTATGGAAACTAGATGGTGTGA 59.902 42.308 0.00 0.00 0.00 3.58
2384 2440 6.127168 TGGTACTATGGAAACTAGATGGTGTG 60.127 42.308 0.00 0.00 0.00 3.82
2385 2441 5.962031 TGGTACTATGGAAACTAGATGGTGT 59.038 40.000 0.00 0.00 0.00 4.16
2386 2442 6.479972 TGGTACTATGGAAACTAGATGGTG 57.520 41.667 0.00 0.00 0.00 4.17
2387 2443 7.691993 ATTGGTACTATGGAAACTAGATGGT 57.308 36.000 0.00 0.00 0.00 3.55
2388 2444 8.095169 GGTATTGGTACTATGGAAACTAGATGG 58.905 40.741 0.00 0.00 0.00 3.51
2389 2445 8.647796 TGGTATTGGTACTATGGAAACTAGATG 58.352 37.037 0.00 0.00 0.00 2.90
2390 2446 8.792830 TGGTATTGGTACTATGGAAACTAGAT 57.207 34.615 0.00 0.00 0.00 1.98
2391 2447 8.612486 TTGGTATTGGTACTATGGAAACTAGA 57.388 34.615 0.00 0.00 0.00 2.43
2392 2448 9.273016 CATTGGTATTGGTACTATGGAAACTAG 57.727 37.037 0.00 0.00 0.00 2.57
2393 2449 8.774183 ACATTGGTATTGGTACTATGGAAACTA 58.226 33.333 0.00 0.00 32.28 2.24
2394 2450 7.639378 ACATTGGTATTGGTACTATGGAAACT 58.361 34.615 0.00 0.00 32.28 2.66
2395 2451 7.875327 ACATTGGTATTGGTACTATGGAAAC 57.125 36.000 0.00 0.00 32.28 2.78
2396 2452 9.976776 TTAACATTGGTATTGGTACTATGGAAA 57.023 29.630 0.00 0.00 32.28 3.13
2397 2453 9.976776 TTTAACATTGGTATTGGTACTATGGAA 57.023 29.630 0.00 0.00 32.28 3.53
2404 2460 9.528018 CCATCAATTTAACATTGGTATTGGTAC 57.472 33.333 9.18 0.00 0.00 3.34
2405 2461 8.200792 GCCATCAATTTAACATTGGTATTGGTA 58.799 33.333 9.18 0.00 0.00 3.25
2406 2462 7.047271 GCCATCAATTTAACATTGGTATTGGT 58.953 34.615 9.18 0.00 0.00 3.67
2407 2463 6.482973 GGCCATCAATTTAACATTGGTATTGG 59.517 38.462 0.00 10.82 0.00 3.16
2408 2464 6.482973 GGGCCATCAATTTAACATTGGTATTG 59.517 38.462 4.39 0.00 0.00 1.90
2409 2465 6.409120 GGGGCCATCAATTTAACATTGGTATT 60.409 38.462 4.39 0.00 0.00 1.89
2410 2466 5.071653 GGGGCCATCAATTTAACATTGGTAT 59.928 40.000 4.39 0.00 0.00 2.73
2411 2467 4.407296 GGGGCCATCAATTTAACATTGGTA 59.593 41.667 4.39 0.00 0.00 3.25
2412 2468 3.199727 GGGGCCATCAATTTAACATTGGT 59.800 43.478 4.39 2.17 0.00 3.67
2413 2469 3.740764 CGGGGCCATCAATTTAACATTGG 60.741 47.826 4.39 0.00 0.00 3.16
2414 2470 3.456280 CGGGGCCATCAATTTAACATTG 58.544 45.455 4.39 4.81 0.00 2.82
2415 2471 2.158971 GCGGGGCCATCAATTTAACATT 60.159 45.455 4.39 0.00 0.00 2.71
2416 2472 1.412343 GCGGGGCCATCAATTTAACAT 59.588 47.619 4.39 0.00 0.00 2.71
2417 2473 0.820871 GCGGGGCCATCAATTTAACA 59.179 50.000 4.39 0.00 0.00 2.41
2418 2474 0.820871 TGCGGGGCCATCAATTTAAC 59.179 50.000 4.39 0.00 0.00 2.01
2419 2475 1.561643 TTGCGGGGCCATCAATTTAA 58.438 45.000 4.39 0.00 0.00 1.52
2420 2476 1.561643 TTTGCGGGGCCATCAATTTA 58.438 45.000 4.39 0.00 0.00 1.40
2421 2477 0.689623 TTTTGCGGGGCCATCAATTT 59.310 45.000 4.39 0.00 0.00 1.82
2422 2478 0.689623 TTTTTGCGGGGCCATCAATT 59.310 45.000 4.39 0.00 0.00 2.32
2423 2479 2.370718 TTTTTGCGGGGCCATCAAT 58.629 47.368 4.39 0.00 0.00 2.57
2424 2480 3.876873 TTTTTGCGGGGCCATCAA 58.123 50.000 4.39 5.66 0.00 2.57
2440 2496 8.674263 TGTGCCTTCATCAATTTAACATTTTT 57.326 26.923 0.00 0.00 0.00 1.94
2441 2497 8.149647 TCTGTGCCTTCATCAATTTAACATTTT 58.850 29.630 0.00 0.00 0.00 1.82
2442 2498 7.669427 TCTGTGCCTTCATCAATTTAACATTT 58.331 30.769 0.00 0.00 0.00 2.32
2443 2499 7.230849 TCTGTGCCTTCATCAATTTAACATT 57.769 32.000 0.00 0.00 0.00 2.71
2444 2500 6.839124 TCTGTGCCTTCATCAATTTAACAT 57.161 33.333 0.00 0.00 0.00 2.71
2445 2501 6.489700 TCTTCTGTGCCTTCATCAATTTAACA 59.510 34.615 0.00 0.00 0.00 2.41
2446 2502 6.913170 TCTTCTGTGCCTTCATCAATTTAAC 58.087 36.000 0.00 0.00 0.00 2.01
2447 2503 7.523293 TTCTTCTGTGCCTTCATCAATTTAA 57.477 32.000 0.00 0.00 0.00 1.52
2448 2504 7.231317 AGTTTCTTCTGTGCCTTCATCAATTTA 59.769 33.333 0.00 0.00 0.00 1.40
2449 2505 6.041296 AGTTTCTTCTGTGCCTTCATCAATTT 59.959 34.615 0.00 0.00 0.00 1.82
2450 2506 5.537674 AGTTTCTTCTGTGCCTTCATCAATT 59.462 36.000 0.00 0.00 0.00 2.32
2451 2507 5.048224 CAGTTTCTTCTGTGCCTTCATCAAT 60.048 40.000 0.00 0.00 0.00 2.57
2452 2508 4.276678 CAGTTTCTTCTGTGCCTTCATCAA 59.723 41.667 0.00 0.00 0.00 2.57
2453 2509 3.817084 CAGTTTCTTCTGTGCCTTCATCA 59.183 43.478 0.00 0.00 0.00 3.07
2454 2510 3.190118 CCAGTTTCTTCTGTGCCTTCATC 59.810 47.826 0.00 0.00 34.02 2.92
2455 2511 3.152341 CCAGTTTCTTCTGTGCCTTCAT 58.848 45.455 0.00 0.00 34.02 2.57
2456 2512 2.092429 ACCAGTTTCTTCTGTGCCTTCA 60.092 45.455 0.00 0.00 34.02 3.02
2457 2513 2.550180 GACCAGTTTCTTCTGTGCCTTC 59.450 50.000 0.00 0.00 34.02 3.46
2458 2514 2.092429 TGACCAGTTTCTTCTGTGCCTT 60.092 45.455 0.00 0.00 34.02 4.35
2459 2515 1.490490 TGACCAGTTTCTTCTGTGCCT 59.510 47.619 0.00 0.00 34.02 4.75
2460 2516 1.604278 GTGACCAGTTTCTTCTGTGCC 59.396 52.381 0.00 0.00 34.02 5.01
2461 2517 2.288666 TGTGACCAGTTTCTTCTGTGC 58.711 47.619 0.00 0.00 34.02 4.57
2462 2518 3.557595 GTCTGTGACCAGTTTCTTCTGTG 59.442 47.826 0.00 0.00 39.82 3.66
2463 2519 3.798202 GTCTGTGACCAGTTTCTTCTGT 58.202 45.455 0.00 0.00 39.82 3.41
2476 2532 3.393089 AGACTCAACATGGTCTGTGAC 57.607 47.619 0.00 0.00 40.71 3.67
2489 2545 4.261322 GGTAGTACACGTTGACAGACTCAA 60.261 45.833 2.06 0.00 36.46 3.02
2490 2546 3.251729 GGTAGTACACGTTGACAGACTCA 59.748 47.826 2.06 0.00 0.00 3.41
2491 2547 3.501445 AGGTAGTACACGTTGACAGACTC 59.499 47.826 2.06 0.00 0.00 3.36
2492 2548 3.484407 AGGTAGTACACGTTGACAGACT 58.516 45.455 2.06 0.00 0.00 3.24
2493 2549 3.911661 AGGTAGTACACGTTGACAGAC 57.088 47.619 2.06 0.00 0.00 3.51
2494 2550 4.098349 ACAAAGGTAGTACACGTTGACAGA 59.902 41.667 17.54 0.00 35.47 3.41
2495 2551 4.365723 ACAAAGGTAGTACACGTTGACAG 58.634 43.478 17.54 5.40 35.47 3.51
2496 2552 4.389890 ACAAAGGTAGTACACGTTGACA 57.610 40.909 17.54 0.00 35.47 3.58
2497 2553 4.209911 GGAACAAAGGTAGTACACGTTGAC 59.790 45.833 17.54 12.64 35.47 3.18
2498 2554 4.099881 AGGAACAAAGGTAGTACACGTTGA 59.900 41.667 17.54 0.00 35.47 3.18
2499 2555 4.374399 AGGAACAAAGGTAGTACACGTTG 58.626 43.478 2.06 8.75 35.47 4.10
2500 2556 4.677673 AGGAACAAAGGTAGTACACGTT 57.322 40.909 2.06 0.00 36.82 3.99
2501 2557 5.789643 TTAGGAACAAAGGTAGTACACGT 57.210 39.130 2.06 0.00 0.00 4.49
2502 2558 8.937634 ATATTTAGGAACAAAGGTAGTACACG 57.062 34.615 2.06 0.00 0.00 4.49
2526 2582 9.723601 ACAATTTGAACTGCCAAAACATATTAT 57.276 25.926 2.79 0.00 39.20 1.28
2528 2584 9.553064 TTACAATTTGAACTGCCAAAACATATT 57.447 25.926 2.79 0.00 39.20 1.28
2529 2585 9.723601 ATTACAATTTGAACTGCCAAAACATAT 57.276 25.926 2.79 0.00 39.20 1.78
2530 2586 9.202273 GATTACAATTTGAACTGCCAAAACATA 57.798 29.630 2.79 0.00 39.20 2.29
2531 2587 7.095691 CGATTACAATTTGAACTGCCAAAACAT 60.096 33.333 2.79 0.00 39.20 2.71
2532 2588 6.199908 CGATTACAATTTGAACTGCCAAAACA 59.800 34.615 2.79 0.00 39.20 2.83
2533 2589 6.580476 CGATTACAATTTGAACTGCCAAAAC 58.420 36.000 2.79 0.00 39.20 2.43
2534 2590 5.176590 GCGATTACAATTTGAACTGCCAAAA 59.823 36.000 2.79 0.00 39.20 2.44
2535 2591 4.683781 GCGATTACAATTTGAACTGCCAAA 59.316 37.500 2.79 0.00 39.93 3.28
2536 2592 4.233789 GCGATTACAATTTGAACTGCCAA 58.766 39.130 2.79 0.00 0.00 4.52
2537 2593 3.254411 TGCGATTACAATTTGAACTGCCA 59.746 39.130 2.79 0.00 0.00 4.92
2538 2594 3.832276 TGCGATTACAATTTGAACTGCC 58.168 40.909 2.79 0.00 0.00 4.85
2539 2595 5.455525 GGTATGCGATTACAATTTGAACTGC 59.544 40.000 2.79 1.55 0.00 4.40
2540 2596 6.688385 CAGGTATGCGATTACAATTTGAACTG 59.312 38.462 2.79 0.00 0.00 3.16
2541 2597 6.597672 TCAGGTATGCGATTACAATTTGAACT 59.402 34.615 2.79 0.00 0.00 3.01
2542 2598 6.781138 TCAGGTATGCGATTACAATTTGAAC 58.219 36.000 2.79 0.00 0.00 3.18
2543 2599 6.993786 TCAGGTATGCGATTACAATTTGAA 57.006 33.333 2.79 0.00 0.00 2.69
2544 2600 6.597672 ACTTCAGGTATGCGATTACAATTTGA 59.402 34.615 2.79 0.00 0.00 2.69
2545 2601 6.785191 ACTTCAGGTATGCGATTACAATTTG 58.215 36.000 0.00 0.00 0.00 2.32
2546 2602 6.823689 AGACTTCAGGTATGCGATTACAATTT 59.176 34.615 0.00 0.00 0.00 1.82
2547 2603 6.349300 AGACTTCAGGTATGCGATTACAATT 58.651 36.000 0.00 0.00 0.00 2.32
2548 2604 5.918608 AGACTTCAGGTATGCGATTACAAT 58.081 37.500 0.00 0.00 0.00 2.71
2549 2605 5.339008 AGACTTCAGGTATGCGATTACAA 57.661 39.130 0.00 0.00 0.00 2.41
2550 2606 6.459670 TTAGACTTCAGGTATGCGATTACA 57.540 37.500 0.00 0.00 0.00 2.41
2551 2607 7.948278 ATTTAGACTTCAGGTATGCGATTAC 57.052 36.000 0.00 0.00 0.00 1.89
2552 2608 7.985184 ACAATTTAGACTTCAGGTATGCGATTA 59.015 33.333 0.00 0.00 0.00 1.75
2553 2609 6.823689 ACAATTTAGACTTCAGGTATGCGATT 59.176 34.615 0.00 0.00 0.00 3.34
2554 2610 6.349300 ACAATTTAGACTTCAGGTATGCGAT 58.651 36.000 0.00 0.00 0.00 4.58
2555 2611 5.730550 ACAATTTAGACTTCAGGTATGCGA 58.269 37.500 0.00 0.00 0.00 5.10
2556 2612 6.533723 TGTACAATTTAGACTTCAGGTATGCG 59.466 38.462 0.00 0.00 0.00 4.73
2557 2613 7.549488 ACTGTACAATTTAGACTTCAGGTATGC 59.451 37.037 0.00 0.00 0.00 3.14
2558 2614 9.436957 AACTGTACAATTTAGACTTCAGGTATG 57.563 33.333 0.00 0.00 0.00 2.39
2561 2617 9.269453 GTAAACTGTACAATTTAGACTTCAGGT 57.731 33.333 9.64 0.00 0.00 4.00
2562 2618 9.268268 TGTAAACTGTACAATTTAGACTTCAGG 57.732 33.333 9.64 0.00 0.00 3.86
2592 2648 8.515414 CGATGGAGTATCAAACAGACTATCATA 58.485 37.037 0.00 0.00 36.25 2.15
2593 2649 7.014711 ACGATGGAGTATCAAACAGACTATCAT 59.985 37.037 0.00 0.00 36.25 2.45
2594 2650 6.321435 ACGATGGAGTATCAAACAGACTATCA 59.679 38.462 0.00 0.00 36.25 2.15
2595 2651 6.740110 ACGATGGAGTATCAAACAGACTATC 58.260 40.000 0.00 0.00 36.25 2.08
2596 2652 6.716934 ACGATGGAGTATCAAACAGACTAT 57.283 37.500 0.00 0.00 36.25 2.12
2597 2653 7.634671 TTACGATGGAGTATCAAACAGACTA 57.365 36.000 0.00 0.00 36.25 2.59
2598 2654 6.525578 TTACGATGGAGTATCAAACAGACT 57.474 37.500 0.00 0.00 36.25 3.24
2599 2655 7.033791 TCTTTACGATGGAGTATCAAACAGAC 58.966 38.462 0.00 0.00 36.25 3.51
2600 2656 7.165460 TCTTTACGATGGAGTATCAAACAGA 57.835 36.000 0.00 0.00 36.25 3.41
2601 2657 7.827819 TTCTTTACGATGGAGTATCAAACAG 57.172 36.000 0.00 0.00 36.25 3.16
2602 2658 8.786826 ATTTCTTTACGATGGAGTATCAAACA 57.213 30.769 0.00 0.00 36.25 2.83
2626 2682 8.325997 GCGTTAGTGATCGAAACACTTTTATAT 58.674 33.333 25.50 9.33 44.69 0.86
2627 2683 7.543172 AGCGTTAGTGATCGAAACACTTTTATA 59.457 33.333 25.50 10.96 44.69 0.98
2628 2684 6.367969 AGCGTTAGTGATCGAAACACTTTTAT 59.632 34.615 25.50 10.41 44.69 1.40
2629 2685 5.693104 AGCGTTAGTGATCGAAACACTTTTA 59.307 36.000 25.50 11.53 44.69 1.52
2630 2686 4.510340 AGCGTTAGTGATCGAAACACTTTT 59.490 37.500 25.50 10.96 44.69 2.27
2631 2687 4.056050 AGCGTTAGTGATCGAAACACTTT 58.944 39.130 25.50 11.50 44.69 2.66
2632 2688 3.650139 AGCGTTAGTGATCGAAACACTT 58.350 40.909 25.50 14.38 44.69 3.16
2634 2690 3.243336 AGAGCGTTAGTGATCGAAACAC 58.757 45.455 15.21 15.21 38.38 3.32
2635 2691 3.570926 AGAGCGTTAGTGATCGAAACA 57.429 42.857 0.00 0.00 0.00 2.83
2636 2692 7.854934 ATATAAGAGCGTTAGTGATCGAAAC 57.145 36.000 0.00 0.00 0.00 2.78
2637 2693 8.867112 AAATATAAGAGCGTTAGTGATCGAAA 57.133 30.769 0.00 0.00 0.00 3.46
2638 2694 8.350722 AGAAATATAAGAGCGTTAGTGATCGAA 58.649 33.333 0.00 0.00 0.00 3.71
2639 2695 7.872881 AGAAATATAAGAGCGTTAGTGATCGA 58.127 34.615 0.00 0.00 0.00 3.59
2640 2696 8.508800 AAGAAATATAAGAGCGTTAGTGATCG 57.491 34.615 0.00 0.00 0.00 3.69
2643 2699 9.229784 CGTAAAGAAATATAAGAGCGTTAGTGA 57.770 33.333 0.00 0.00 0.00 3.41
2644 2700 8.477709 CCGTAAAGAAATATAAGAGCGTTAGTG 58.522 37.037 0.00 0.00 0.00 2.74
2645 2701 8.408601 TCCGTAAAGAAATATAAGAGCGTTAGT 58.591 33.333 0.00 0.00 0.00 2.24
2646 2702 8.792831 TCCGTAAAGAAATATAAGAGCGTTAG 57.207 34.615 0.00 0.00 0.00 2.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.