Multiple sequence alignment - TraesCS2A01G050300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G050300 chr2A 100.000 3128 0 0 1 3128 19437616 19434489 0.000000e+00 5777.0
1 TraesCS2A01G050300 chr2A 87.391 230 15 5 386 601 19436670 19436441 5.180000e-63 252.0
2 TraesCS2A01G050300 chr2A 87.391 230 15 5 947 1176 19437231 19437016 5.180000e-63 252.0
3 TraesCS2A01G050300 chr2A 94.215 121 5 2 2405 2524 565595340 565595221 1.920000e-42 183.0
4 TraesCS2A01G050300 chr2A 97.170 106 3 0 2405 2510 334533170 334533065 2.480000e-41 180.0
5 TraesCS2A01G050300 chr2B 90.365 1370 108 8 819 2175 30313887 30312529 0.000000e+00 1777.0
6 TraesCS2A01G050300 chr2B 87.605 1549 144 18 640 2167 30301613 30300092 0.000000e+00 1753.0
7 TraesCS2A01G050300 chr2B 87.572 1215 82 28 640 1826 30418737 30417564 0.000000e+00 1343.0
8 TraesCS2A01G050300 chr2B 81.705 1044 162 22 1158 2198 30303513 30302496 0.000000e+00 843.0
9 TraesCS2A01G050300 chr2B 89.626 588 52 5 1624 2205 30299603 30299019 0.000000e+00 739.0
10 TraesCS2A01G050300 chr2B 89.593 221 18 2 386 601 30313749 30313529 3.070000e-70 276.0
11 TraesCS2A01G050300 chr2B 87.838 222 13 7 386 601 30418430 30418217 6.700000e-62 248.0
12 TraesCS2A01G050300 chr2B 87.054 224 21 2 386 601 30301307 30301084 2.410000e-61 246.0
13 TraesCS2A01G050300 chr2B 89.349 169 18 0 392 560 30311411 30311243 2.440000e-51 213.0
14 TraesCS2A01G050300 chr2B 85.311 177 18 6 953 1129 30311411 30311243 3.210000e-40 176.0
15 TraesCS2A01G050300 chr2B 86.441 118 12 4 5 122 582961368 582961481 3.270000e-25 126.0
16 TraesCS2A01G050300 chr2D 90.036 1375 107 9 947 2318 18269997 18268650 0.000000e+00 1753.0
17 TraesCS2A01G050300 chr2D 88.629 1451 110 25 799 2215 14359317 14357888 0.000000e+00 1714.0
18 TraesCS2A01G050300 chr2D 88.785 1177 88 18 1152 2318 18257340 18256198 0.000000e+00 1402.0
19 TraesCS2A01G050300 chr2D 88.951 1077 105 10 1153 2221 13856235 13857305 0.000000e+00 1317.0
20 TraesCS2A01G050300 chr2D 92.246 619 24 12 1 601 18270386 18269774 0.000000e+00 856.0
21 TraesCS2A01G050300 chr2D 90.877 570 46 3 1543 2111 18267137 18266573 0.000000e+00 760.0
22 TraesCS2A01G050300 chr2D 79.659 880 161 11 1253 2129 22165952 22166816 4.430000e-173 617.0
23 TraesCS2A01G050300 chr2D 91.556 225 15 4 2100 2323 18265654 18265433 1.090000e-79 307.0
24 TraesCS2A01G050300 chr2D 87.903 248 20 7 680 919 18271904 18271659 1.840000e-72 283.0
25 TraesCS2A01G050300 chr2D 82.515 326 45 5 924 1249 14360529 14360216 3.070000e-70 276.0
26 TraesCS2A01G050300 chr2D 87.826 230 14 4 386 601 14359166 14358937 1.110000e-64 257.0
27 TraesCS2A01G050300 chr2D 84.500 200 16 10 712 904 18270262 18270071 1.920000e-42 183.0
28 TraesCS2A01G050300 chr2D 84.974 193 5 4 1081 1273 18271659 18271491 1.150000e-39 174.0
29 TraesCS2A01G050300 chr2D 90.984 122 8 1 3007 3128 18254843 18254725 8.980000e-36 161.0
30 TraesCS2A01G050300 chr2D 89.565 115 6 4 2611 2724 14357485 14357376 1.170000e-29 141.0
31 TraesCS2A01G050300 chr2D 97.143 35 0 1 856 890 18272863 18272896 1.210000e-04 58.4
32 TraesCS2A01G050300 chr6A 74.219 768 165 26 1318 2073 594661502 594662248 1.100000e-74 291.0
33 TraesCS2A01G050300 chr7A 98.113 106 2 0 2405 2510 138962922 138962817 5.330000e-43 185.0
34 TraesCS2A01G050300 chr4D 99.010 101 1 0 2405 2505 35630677 35630777 6.890000e-42 182.0
35 TraesCS2A01G050300 chr5B 97.170 106 3 0 2405 2510 695987758 695987863 2.480000e-41 180.0
36 TraesCS2A01G050300 chr5B 96.296 108 4 0 2405 2512 658367839 658367946 8.910000e-41 178.0
37 TraesCS2A01G050300 chr5B 94.737 114 4 2 2405 2516 658367823 658367710 3.210000e-40 176.0
38 TraesCS2A01G050300 chr1B 97.143 105 3 0 2405 2509 493241920 493242024 8.910000e-41 178.0
39 TraesCS2A01G050300 chr1B 87.395 119 8 7 5 122 130408737 130408625 2.530000e-26 130.0
40 TraesCS2A01G050300 chr1B 86.441 118 12 4 5 122 448327032 448327145 3.270000e-25 126.0
41 TraesCS2A01G050300 chr3B 92.500 120 6 2 2405 2522 591366507 591366389 5.370000e-38 169.0
42 TraesCS2A01G050300 chr4B 88.136 118 10 4 5 122 203531716 203531603 1.510000e-28 137.0
43 TraesCS2A01G050300 chr4B 85.950 121 11 5 9 129 7037067 7036953 1.180000e-24 124.0
44 TraesCS2A01G050300 chr7B 86.441 118 12 4 5 122 387010206 387010319 3.270000e-25 126.0
45 TraesCS2A01G050300 chr4A 85.484 124 12 6 5 127 665604174 665604292 1.180000e-24 124.0
46 TraesCS2A01G050300 chr1A 86.842 114 11 3 9 122 96444195 96444086 1.180000e-24 124.0
47 TraesCS2A01G050300 chr5D 94.366 71 3 1 2854 2924 495958762 495958831 1.190000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G050300 chr2A 19434489 19437616 3127 True 2093.666667 5777 91.594000 1 3128 3 chr2A.!!$R3 3127
1 TraesCS2A01G050300 chr2B 30299019 30303513 4494 True 895.250000 1753 86.497500 386 2205 4 chr2B.!!$R1 1819
2 TraesCS2A01G050300 chr2B 30417564 30418737 1173 True 795.500000 1343 87.705000 386 1826 2 chr2B.!!$R3 1440
3 TraesCS2A01G050300 chr2B 30311243 30313887 2644 True 610.500000 1777 88.654500 386 2175 4 chr2B.!!$R2 1789
4 TraesCS2A01G050300 chr2D 13856235 13857305 1070 False 1317.000000 1317 88.951000 1153 2221 1 chr2D.!!$F1 1068
5 TraesCS2A01G050300 chr2D 18254725 18257340 2615 True 781.500000 1402 89.884500 1152 3128 2 chr2D.!!$R2 1976
6 TraesCS2A01G050300 chr2D 22165952 22166816 864 False 617.000000 617 79.659000 1253 2129 1 chr2D.!!$F3 876
7 TraesCS2A01G050300 chr2D 18265433 18271904 6471 True 616.571429 1753 88.870286 1 2323 7 chr2D.!!$R3 2322
8 TraesCS2A01G050300 chr2D 14357376 14360529 3153 True 597.000000 1714 87.133750 386 2724 4 chr2D.!!$R1 2338
9 TraesCS2A01G050300 chr6A 594661502 594662248 746 False 291.000000 291 74.219000 1318 2073 1 chr6A.!!$F1 755

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
566 2097 0.247736 ACCGATGAGTTCACCAGAGC 59.752 55.0 0.0 0.0 0.0 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2494 7351 0.03601 CATCACTTCGGCCCAGTTCT 60.036 55.0 0.0 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 1547 9.074576 AGAACAATACGGATGTACATAGACATA 57.925 33.333 8.71 0.00 40.18 2.29
74 1593 4.939052 ATGTTTCGTATGTAGCTAGCCT 57.061 40.909 12.13 1.20 0.00 4.58
89 1608 6.985653 AGCTAGCCTGTATTGAAATCTCTA 57.014 37.500 12.13 0.00 0.00 2.43
124 1643 9.827198 TTATATTTAGGAACGGAGGGAGTAATA 57.173 33.333 0.00 0.00 0.00 0.98
229 1748 5.135362 ACTTGGCTATATATTTGGGTTGGGA 59.865 40.000 0.00 0.00 0.00 4.37
230 1749 4.993028 TGGCTATATATTTGGGTTGGGAC 58.007 43.478 0.00 0.00 0.00 4.46
233 1752 4.454504 GCTATATATTTGGGTTGGGACACG 59.545 45.833 0.00 0.00 39.29 4.49
257 1776 4.918810 AGGATTATTTTCGGTGCAATCC 57.081 40.909 3.91 3.91 43.25 3.01
294 1815 4.627467 ACTTTGAGTGCACGATCTGATTAC 59.373 41.667 12.01 0.00 0.00 1.89
295 1816 2.797491 TGAGTGCACGATCTGATTACG 58.203 47.619 12.01 0.00 0.00 3.18
301 1822 1.022735 ACGATCTGATTACGGCGAGT 58.977 50.000 16.62 0.00 0.00 4.18
302 1823 1.002684 ACGATCTGATTACGGCGAGTC 60.003 52.381 16.62 8.96 0.00 3.36
303 1824 1.676057 GATCTGATTACGGCGAGTCG 58.324 55.000 16.62 8.54 0.00 4.18
304 1825 1.002684 GATCTGATTACGGCGAGTCGT 60.003 52.381 16.62 8.09 45.88 4.34
305 1826 0.806868 TCTGATTACGGCGAGTCGTT 59.193 50.000 16.62 1.52 43.59 3.85
332 1853 1.130613 GCATGCGTCACAACTCGAC 59.869 57.895 0.00 0.00 0.00 4.20
333 1854 1.556591 GCATGCGTCACAACTCGACA 61.557 55.000 0.00 0.00 32.72 4.35
373 1898 7.559335 TTTATATATGTGCAGGGAGATGAGT 57.441 36.000 0.00 0.00 0.00 3.41
378 1903 1.211457 GTGCAGGGAGATGAGTTGGAT 59.789 52.381 0.00 0.00 0.00 3.41
382 1907 3.539604 CAGGGAGATGAGTTGGATTCAC 58.460 50.000 0.00 0.00 0.00 3.18
426 1955 2.708325 AGATCCTGCTCCCTCCATAAAC 59.292 50.000 0.00 0.00 0.00 2.01
460 1989 3.487202 CGTCATCGCACCAACCGG 61.487 66.667 0.00 0.00 38.77 5.28
467 1996 2.954611 GCACCAACCGGCTTCTTC 59.045 61.111 0.00 0.00 34.57 2.87
468 1997 1.600916 GCACCAACCGGCTTCTTCT 60.601 57.895 0.00 0.00 34.57 2.85
469 1998 1.578206 GCACCAACCGGCTTCTTCTC 61.578 60.000 0.00 0.00 34.57 2.87
477 2006 2.317040 CCGGCTTCTTCTCTACCCATA 58.683 52.381 0.00 0.00 0.00 2.74
489 2020 5.655394 TCTCTACCCATACATAGCCAAGAT 58.345 41.667 0.00 0.00 0.00 2.40
519 2050 3.721706 CTCCCCTCCCACACCAGC 61.722 72.222 0.00 0.00 0.00 4.85
556 2087 1.610673 ACCAGCTCCACCGATGAGT 60.611 57.895 0.00 0.00 32.31 3.41
566 2097 0.247736 ACCGATGAGTTCACCAGAGC 59.752 55.000 0.00 0.00 0.00 4.09
594 2125 2.273179 CCACCGAGAGTTCACCGGA 61.273 63.158 9.46 0.00 45.58 5.14
601 2132 2.049433 AGTTCACCGGAAGACGCG 60.049 61.111 9.46 3.53 42.52 6.01
602 2133 3.110178 GTTCACCGGAAGACGCGG 61.110 66.667 9.46 0.00 42.52 6.46
603 2134 3.296836 TTCACCGGAAGACGCGGA 61.297 61.111 9.46 0.00 42.52 5.54
604 2135 3.277211 TTCACCGGAAGACGCGGAG 62.277 63.158 9.46 0.00 42.52 4.63
605 2136 4.796231 CACCGGAAGACGCGGAGG 62.796 72.222 9.46 6.65 42.52 4.30
611 2142 1.800713 GAAGACGCGGAGGTCGAAC 60.801 63.158 12.47 0.00 41.81 3.95
613 2144 2.049802 GACGCGGAGGTCGAACAA 60.050 61.111 12.47 0.00 42.43 2.83
615 2146 1.005394 ACGCGGAGGTCGAACAAAT 60.005 52.632 12.47 0.00 42.43 2.32
616 2147 1.289109 ACGCGGAGGTCGAACAAATG 61.289 55.000 12.47 0.00 42.43 2.32
617 2148 1.289109 CGCGGAGGTCGAACAAATGT 61.289 55.000 1.87 0.00 42.43 2.71
618 2149 0.442699 GCGGAGGTCGAACAAATGTC 59.557 55.000 1.87 0.00 42.43 3.06
620 2151 1.337823 CGGAGGTCGAACAAATGTCCT 60.338 52.381 1.87 0.00 42.43 3.85
621 2152 2.347731 GGAGGTCGAACAAATGTCCTC 58.652 52.381 1.87 4.46 40.21 3.71
622 2153 2.028020 GGAGGTCGAACAAATGTCCTCT 60.028 50.000 1.87 0.00 40.60 3.69
623 2154 3.254892 GAGGTCGAACAAATGTCCTCTC 58.745 50.000 1.87 0.00 38.56 3.20
626 2157 1.067142 TCGAACAAATGTCCTCTCGGG 60.067 52.381 5.76 0.00 0.00 5.14
627 2158 1.087501 GAACAAATGTCCTCTCGGGC 58.912 55.000 0.00 0.00 34.70 6.13
633 2164 1.825341 TGTCCTCTCGGGCATGATG 59.175 57.895 0.00 0.00 40.79 3.07
635 2166 2.664185 CCTCTCGGGCATGATGCG 60.664 66.667 11.75 0.00 46.21 4.73
636 2167 2.664185 CTCTCGGGCATGATGCGG 60.664 66.667 11.75 6.05 46.21 5.69
637 2168 3.153781 TCTCGGGCATGATGCGGA 61.154 61.111 11.75 10.18 46.21 5.54
645 4039 2.028112 GGGCATGATGCGGAGTAAGATA 60.028 50.000 11.75 0.00 46.21 1.98
677 4076 9.399797 AGATGAGATGTGTTATTCTATTTGCAA 57.600 29.630 0.00 0.00 0.00 4.08
688 4087 2.945008 TCTATTTGCAATGCCGGAGAAG 59.055 45.455 5.05 0.00 0.00 2.85
702 4104 4.323028 GCCGGAGAAGGATATGATTCATCA 60.323 45.833 5.05 0.00 41.70 3.07
759 4178 3.003480 GTTGCATCCTCCTAGTGTTCAC 58.997 50.000 0.00 0.00 0.00 3.18
761 4180 2.906389 TGCATCCTCCTAGTGTTCACTT 59.094 45.455 10.74 0.00 0.00 3.16
1007 4691 2.429610 ACTATAACGGCTCGATGTGGTT 59.570 45.455 1.50 0.00 0.00 3.67
1147 4859 4.056125 CAGAGAGTGCCACCGCGA 62.056 66.667 8.23 0.00 38.08 5.87
1148 4860 3.071206 AGAGAGTGCCACCGCGAT 61.071 61.111 8.23 0.00 38.08 4.58
1149 4861 2.583593 GAGAGTGCCACCGCGATC 60.584 66.667 8.23 0.00 38.08 3.69
1150 4862 4.498520 AGAGTGCCACCGCGATCG 62.499 66.667 11.69 11.69 38.08 3.69
1397 5112 2.579201 CCTCGCCTTCACCATCGT 59.421 61.111 0.00 0.00 0.00 3.73
1404 5119 0.320421 CCTTCACCATCGTCAACCGT 60.320 55.000 0.00 0.00 37.94 4.83
1407 5122 0.389757 TCACCATCGTCAACCGTTCA 59.610 50.000 0.00 0.00 37.94 3.18
1414 5129 2.174969 GTCAACCGTTCACGCCACA 61.175 57.895 0.00 0.00 38.18 4.17
1450 5171 3.314331 CGCTCCTCACCCACCACT 61.314 66.667 0.00 0.00 0.00 4.00
1832 6593 1.475403 GAGGAGATCAAGTCGGACCA 58.525 55.000 4.14 0.00 0.00 4.02
1834 6595 1.006043 AGGAGATCAAGTCGGACCAGA 59.994 52.381 4.14 3.54 0.00 3.86
2089 6853 1.139734 GAGAAGCTCGACCGCATCA 59.860 57.895 4.94 0.00 30.53 3.07
2154 6918 4.060900 GTGTCATCTGTCATCTGTTGTGT 58.939 43.478 0.00 0.00 0.00 3.72
2192 6956 2.431454 CTTCTTCTTGTTGGGGAGAGC 58.569 52.381 0.00 0.00 0.00 4.09
2193 6957 0.693049 TCTTCTTGTTGGGGAGAGCC 59.307 55.000 0.00 0.00 0.00 4.70
2282 7119 4.647564 AGGCTGGGATATCGATTCATTT 57.352 40.909 1.71 0.00 0.00 2.32
2291 7142 8.647796 TGGGATATCGATTCATTTACAACTAGT 58.352 33.333 1.71 0.00 0.00 2.57
2302 7153 2.332063 ACAACTAGTTGCTGTGCAGT 57.668 45.000 30.97 10.02 44.03 4.40
2318 7169 5.126779 TGTGCAGTTGTGATTTTAGTGGTA 58.873 37.500 0.00 0.00 0.00 3.25
2320 7171 6.072728 TGTGCAGTTGTGATTTTAGTGGTATC 60.073 38.462 0.00 0.00 0.00 2.24
2322 7173 6.149308 TGCAGTTGTGATTTTAGTGGTATCTG 59.851 38.462 0.00 0.00 0.00 2.90
2323 7174 6.371548 GCAGTTGTGATTTTAGTGGTATCTGA 59.628 38.462 0.00 0.00 0.00 3.27
2324 7175 7.094805 GCAGTTGTGATTTTAGTGGTATCTGAA 60.095 37.037 0.00 0.00 0.00 3.02
2325 7176 8.783093 CAGTTGTGATTTTAGTGGTATCTGAAA 58.217 33.333 0.00 0.00 0.00 2.69
2326 7177 8.784043 AGTTGTGATTTTAGTGGTATCTGAAAC 58.216 33.333 0.00 0.00 0.00 2.78
2327 7178 8.784043 GTTGTGATTTTAGTGGTATCTGAAACT 58.216 33.333 0.00 0.00 0.00 2.66
2329 7180 9.653287 TGTGATTTTAGTGGTATCTGAAACTAG 57.347 33.333 0.00 0.00 0.00 2.57
2330 7181 9.099454 GTGATTTTAGTGGTATCTGAAACTAGG 57.901 37.037 0.00 0.00 0.00 3.02
2332 7183 7.563724 TTTTAGTGGTATCTGAAACTAGGGT 57.436 36.000 0.00 0.00 0.00 4.34
2333 7184 6.540438 TTAGTGGTATCTGAAACTAGGGTG 57.460 41.667 0.00 0.00 0.00 4.61
2335 7186 5.091552 AGTGGTATCTGAAACTAGGGTGAA 58.908 41.667 0.00 0.00 0.00 3.18
2336 7187 5.726793 AGTGGTATCTGAAACTAGGGTGAAT 59.273 40.000 0.00 0.00 0.00 2.57
2337 7188 6.215636 AGTGGTATCTGAAACTAGGGTGAATT 59.784 38.462 0.00 0.00 0.00 2.17
2338 7189 6.316390 GTGGTATCTGAAACTAGGGTGAATTG 59.684 42.308 0.00 0.00 0.00 2.32
2339 7190 6.214615 TGGTATCTGAAACTAGGGTGAATTGA 59.785 38.462 0.00 0.00 0.00 2.57
2341 7192 7.227512 GGTATCTGAAACTAGGGTGAATTGATG 59.772 40.741 0.00 0.00 0.00 3.07
2344 7195 6.881065 TCTGAAACTAGGGTGAATTGATGAAG 59.119 38.462 0.00 0.00 0.00 3.02
2347 7198 5.762179 ACTAGGGTGAATTGATGAAGTGA 57.238 39.130 0.00 0.00 0.00 3.41
2348 7199 6.319048 ACTAGGGTGAATTGATGAAGTGAT 57.681 37.500 0.00 0.00 0.00 3.06
2349 7200 7.437713 ACTAGGGTGAATTGATGAAGTGATA 57.562 36.000 0.00 0.00 0.00 2.15
2350 7201 7.504403 ACTAGGGTGAATTGATGAAGTGATAG 58.496 38.462 0.00 0.00 0.00 2.08
2352 7203 4.883585 GGGTGAATTGATGAAGTGATAGCA 59.116 41.667 0.00 0.00 0.00 3.49
2353 7204 5.008415 GGGTGAATTGATGAAGTGATAGCAG 59.992 44.000 0.00 0.00 0.00 4.24
2354 7205 5.008415 GGTGAATTGATGAAGTGATAGCAGG 59.992 44.000 0.00 0.00 0.00 4.85
2356 7207 6.094603 GTGAATTGATGAAGTGATAGCAGGTT 59.905 38.462 0.00 0.00 0.00 3.50
2357 7208 6.094464 TGAATTGATGAAGTGATAGCAGGTTG 59.906 38.462 0.00 0.00 0.00 3.77
2366 7217 6.299805 AGTGATAGCAGGTTGATAGTGAAA 57.700 37.500 0.00 0.00 0.00 2.69
2368 7219 6.765036 AGTGATAGCAGGTTGATAGTGAAATG 59.235 38.462 0.00 0.00 0.00 2.32
2369 7220 6.763135 GTGATAGCAGGTTGATAGTGAAATGA 59.237 38.462 0.00 0.00 0.00 2.57
2372 7223 5.564550 AGCAGGTTGATAGTGAAATGAAGT 58.435 37.500 0.00 0.00 0.00 3.01
2373 7224 5.413833 AGCAGGTTGATAGTGAAATGAAGTG 59.586 40.000 0.00 0.00 0.00 3.16
2374 7225 5.412594 GCAGGTTGATAGTGAAATGAAGTGA 59.587 40.000 0.00 0.00 0.00 3.41
2375 7226 6.621596 GCAGGTTGATAGTGAAATGAAGTGAC 60.622 42.308 0.00 0.00 0.00 3.67
2376 7227 5.639506 AGGTTGATAGTGAAATGAAGTGACG 59.360 40.000 0.00 0.00 0.00 4.35
2381 7232 2.802816 AGTGAAATGAAGTGACGTGCTC 59.197 45.455 0.00 0.00 0.00 4.26
2390 7241 0.753262 GTGACGTGCTCCTGGGATAT 59.247 55.000 0.00 0.00 0.00 1.63
2393 7244 1.412710 GACGTGCTCCTGGGATATCAA 59.587 52.381 4.83 0.00 0.00 2.57
2408 7265 8.547481 TGGGATATCAAGTTTACAGTGAGATA 57.453 34.615 4.83 0.00 0.00 1.98
2409 7266 8.642432 TGGGATATCAAGTTTACAGTGAGATAG 58.358 37.037 4.83 0.00 0.00 2.08
2410 7267 8.091449 GGGATATCAAGTTTACAGTGAGATAGG 58.909 40.741 4.83 0.00 0.00 2.57
2411 7268 8.861086 GGATATCAAGTTTACAGTGAGATAGGA 58.139 37.037 4.83 0.00 0.00 2.94
2414 7271 8.954950 ATCAAGTTTACAGTGAGATAGGATTG 57.045 34.615 0.00 0.00 0.00 2.67
2415 7272 7.907389 TCAAGTTTACAGTGAGATAGGATTGT 58.093 34.615 0.00 0.00 0.00 2.71
2416 7273 9.031537 TCAAGTTTACAGTGAGATAGGATTGTA 57.968 33.333 0.00 0.00 0.00 2.41
2417 7274 9.653287 CAAGTTTACAGTGAGATAGGATTGTAA 57.347 33.333 0.00 0.00 31.39 2.41
2423 7280 8.918202 ACAGTGAGATAGGATTGTAAAACAAA 57.082 30.769 0.00 0.00 41.96 2.83
2424 7281 9.520515 ACAGTGAGATAGGATTGTAAAACAAAT 57.479 29.630 0.00 0.00 41.96 2.32
2425 7282 9.778993 CAGTGAGATAGGATTGTAAAACAAATG 57.221 33.333 0.00 0.00 41.96 2.32
2426 7283 8.960591 AGTGAGATAGGATTGTAAAACAAATGG 58.039 33.333 0.00 0.00 41.96 3.16
2427 7284 8.190784 GTGAGATAGGATTGTAAAACAAATGGG 58.809 37.037 0.00 0.00 41.96 4.00
2428 7285 7.341769 TGAGATAGGATTGTAAAACAAATGGGG 59.658 37.037 0.00 0.00 41.96 4.96
2429 7286 4.551702 AGGATTGTAAAACAAATGGGGC 57.448 40.909 0.00 0.00 41.96 5.80
2430 7287 4.167319 AGGATTGTAAAACAAATGGGGCT 58.833 39.130 0.00 0.00 41.96 5.19
2431 7288 4.222810 AGGATTGTAAAACAAATGGGGCTC 59.777 41.667 0.00 0.00 41.96 4.70
2432 7289 4.020662 GGATTGTAAAACAAATGGGGCTCA 60.021 41.667 0.00 0.00 41.96 4.26
2433 7290 5.512232 GGATTGTAAAACAAATGGGGCTCAA 60.512 40.000 0.00 0.00 41.96 3.02
2434 7291 5.359194 TTGTAAAACAAATGGGGCTCAAA 57.641 34.783 0.00 0.00 34.76 2.69
2435 7292 4.954875 TGTAAAACAAATGGGGCTCAAAG 58.045 39.130 0.00 0.00 0.00 2.77
2436 7293 4.651503 TGTAAAACAAATGGGGCTCAAAGA 59.348 37.500 0.00 0.00 0.00 2.52
2437 7294 4.980339 AAAACAAATGGGGCTCAAAGAT 57.020 36.364 0.00 0.00 0.00 2.40
2438 7295 4.980339 AAACAAATGGGGCTCAAAGATT 57.020 36.364 0.00 0.00 0.00 2.40
2439 7296 4.541973 AACAAATGGGGCTCAAAGATTC 57.458 40.909 0.00 0.00 0.00 2.52
2440 7297 3.782992 ACAAATGGGGCTCAAAGATTCT 58.217 40.909 0.00 0.00 0.00 2.40
2441 7298 3.512724 ACAAATGGGGCTCAAAGATTCTG 59.487 43.478 0.00 0.00 0.00 3.02
2442 7299 2.449137 ATGGGGCTCAAAGATTCTGG 57.551 50.000 0.00 0.00 0.00 3.86
2443 7300 0.332632 TGGGGCTCAAAGATTCTGGG 59.667 55.000 0.00 0.00 0.00 4.45
2444 7301 0.625849 GGGGCTCAAAGATTCTGGGA 59.374 55.000 0.00 0.00 0.00 4.37
2445 7302 1.409381 GGGGCTCAAAGATTCTGGGAG 60.409 57.143 9.42 9.42 0.00 4.30
2446 7303 1.561542 GGGCTCAAAGATTCTGGGAGA 59.438 52.381 15.41 0.14 0.00 3.71
2447 7304 2.025887 GGGCTCAAAGATTCTGGGAGAA 60.026 50.000 15.41 0.00 38.78 2.87
2448 7305 3.277715 GGCTCAAAGATTCTGGGAGAAG 58.722 50.000 15.41 0.00 37.69 2.85
2449 7306 2.682352 GCTCAAAGATTCTGGGAGAAGC 59.318 50.000 15.41 0.00 40.68 3.86
2453 7310 3.796764 GATTCTGGGAGAAGCTGGG 57.203 57.895 0.00 0.00 37.62 4.45
2454 7311 0.915364 GATTCTGGGAGAAGCTGGGT 59.085 55.000 0.00 0.00 37.62 4.51
2455 7312 2.119495 GATTCTGGGAGAAGCTGGGTA 58.881 52.381 0.00 0.00 37.62 3.69
2456 7313 1.573108 TTCTGGGAGAAGCTGGGTAG 58.427 55.000 0.00 0.00 29.50 3.18
2457 7314 0.325671 TCTGGGAGAAGCTGGGTAGG 60.326 60.000 0.00 0.00 0.00 3.18
2458 7315 1.306997 TGGGAGAAGCTGGGTAGGG 60.307 63.158 0.00 0.00 0.00 3.53
2459 7316 2.073101 GGGAGAAGCTGGGTAGGGG 61.073 68.421 0.00 0.00 0.00 4.79
2460 7317 1.307084 GGAGAAGCTGGGTAGGGGT 60.307 63.158 0.00 0.00 0.00 4.95
2461 7318 1.338890 GGAGAAGCTGGGTAGGGGTC 61.339 65.000 0.00 0.00 0.00 4.46
2462 7319 1.677637 GAGAAGCTGGGTAGGGGTCG 61.678 65.000 0.00 0.00 0.00 4.79
2463 7320 2.687566 AAGCTGGGTAGGGGTCGG 60.688 66.667 0.00 0.00 0.00 4.79
2464 7321 3.248248 AAGCTGGGTAGGGGTCGGA 62.248 63.158 0.00 0.00 0.00 4.55
2465 7322 2.446036 GCTGGGTAGGGGTCGGAT 60.446 66.667 0.00 0.00 0.00 4.18
2466 7323 2.070650 GCTGGGTAGGGGTCGGATT 61.071 63.158 0.00 0.00 0.00 3.01
2467 7324 2.041206 GCTGGGTAGGGGTCGGATTC 62.041 65.000 0.00 0.00 0.00 2.52
2468 7325 0.398664 CTGGGTAGGGGTCGGATTCT 60.399 60.000 0.00 0.00 0.00 2.40
2469 7326 0.689745 TGGGTAGGGGTCGGATTCTG 60.690 60.000 0.00 0.00 0.00 3.02
2470 7327 1.408453 GGGTAGGGGTCGGATTCTGG 61.408 65.000 0.00 0.00 0.00 3.86
2471 7328 1.408453 GGTAGGGGTCGGATTCTGGG 61.408 65.000 0.00 0.00 0.00 4.45
2472 7329 0.398098 GTAGGGGTCGGATTCTGGGA 60.398 60.000 0.00 0.00 0.00 4.37
2473 7330 0.105658 TAGGGGTCGGATTCTGGGAG 60.106 60.000 0.00 0.00 0.00 4.30
2474 7331 1.382695 GGGGTCGGATTCTGGGAGA 60.383 63.158 0.00 0.00 0.00 3.71
2475 7332 0.981277 GGGGTCGGATTCTGGGAGAA 60.981 60.000 0.00 0.00 38.78 2.87
2476 7333 1.132500 GGGTCGGATTCTGGGAGAAT 58.868 55.000 0.00 0.00 46.84 2.40
2500 7357 4.170292 CCAGATTCTGGCAAAAGAACTG 57.830 45.455 19.49 12.95 45.13 3.16
2501 7358 3.057033 CCAGATTCTGGCAAAAGAACTGG 60.057 47.826 19.49 18.64 45.13 4.00
2502 7359 3.057033 CAGATTCTGGCAAAAGAACTGGG 60.057 47.826 5.73 0.00 38.95 4.45
2503 7360 1.039856 TTCTGGCAAAAGAACTGGGC 58.960 50.000 0.00 0.00 31.19 5.36
2504 7361 0.827507 TCTGGCAAAAGAACTGGGCC 60.828 55.000 0.00 0.00 44.82 5.80
2520 7377 1.965930 GCCGAAGTGATGTGCCACA 60.966 57.895 0.00 0.00 39.42 4.17
2521 7378 1.308069 GCCGAAGTGATGTGCCACAT 61.308 55.000 10.74 10.74 42.43 3.21
2564 7426 4.262617 GGTTCTTCATAGAGGGGACAAAC 58.737 47.826 0.00 0.00 0.00 2.93
2609 7475 5.621197 TTCAACGACAATTTCATAGGTGG 57.379 39.130 0.00 0.00 0.00 4.61
2613 7479 5.670792 ACGACAATTTCATAGGTGGTAGA 57.329 39.130 0.00 0.00 0.00 2.59
2614 7480 6.045072 ACGACAATTTCATAGGTGGTAGAA 57.955 37.500 0.00 0.00 0.00 2.10
2615 7481 6.469410 ACGACAATTTCATAGGTGGTAGAAA 58.531 36.000 0.00 0.00 34.83 2.52
2617 7483 7.610305 ACGACAATTTCATAGGTGGTAGAAAAT 59.390 33.333 0.00 0.00 34.13 1.82
2618 7484 7.910162 CGACAATTTCATAGGTGGTAGAAAATG 59.090 37.037 0.00 0.00 37.08 2.32
2622 7488 9.753674 AATTTCATAGGTGGTAGAAAATGAGAA 57.246 29.630 0.00 0.00 34.13 2.87
2623 7489 8.561738 TTTCATAGGTGGTAGAAAATGAGAAC 57.438 34.615 0.00 0.00 0.00 3.01
2652 9159 9.660544 AAAAGGGGCTAAACAATAATATGATCT 57.339 29.630 0.00 0.00 0.00 2.75
2668 9175 4.790765 TGATCTAAAGCATCGATCGGAT 57.209 40.909 16.41 7.10 37.07 4.18
2670 9177 5.884771 TGATCTAAAGCATCGATCGGATAG 58.115 41.667 16.41 8.88 37.07 2.08
2671 9178 4.703645 TCTAAAGCATCGATCGGATAGG 57.296 45.455 16.41 0.00 32.85 2.57
2672 9179 4.332828 TCTAAAGCATCGATCGGATAGGA 58.667 43.478 16.41 0.00 32.85 2.94
2673 9180 3.305398 AAAGCATCGATCGGATAGGAC 57.695 47.619 16.41 0.00 32.85 3.85
2674 9181 1.911057 AGCATCGATCGGATAGGACA 58.089 50.000 16.41 0.00 32.85 4.02
2675 9182 1.542030 AGCATCGATCGGATAGGACAC 59.458 52.381 16.41 0.00 32.85 3.67
2676 9183 1.542030 GCATCGATCGGATAGGACACT 59.458 52.381 16.41 0.00 32.85 3.55
2677 9184 2.747989 GCATCGATCGGATAGGACACTA 59.252 50.000 16.41 0.00 32.85 2.74
2678 9185 3.190744 GCATCGATCGGATAGGACACTAA 59.809 47.826 16.41 0.00 32.85 2.24
2679 9186 4.673061 GCATCGATCGGATAGGACACTAAG 60.673 50.000 16.41 0.00 32.85 2.18
2682 9189 3.819337 CGATCGGATAGGACACTAAGGAA 59.181 47.826 7.38 0.00 31.86 3.36
2724 9234 4.023279 TGAAAATACACTTGCAGCGACAAT 60.023 37.500 0.00 0.00 0.00 2.71
2725 9235 4.503741 AAATACACTTGCAGCGACAATT 57.496 36.364 0.00 0.00 0.00 2.32
2726 9236 5.621197 AAATACACTTGCAGCGACAATTA 57.379 34.783 0.00 0.00 0.00 1.40
2727 9237 5.621197 AATACACTTGCAGCGACAATTAA 57.379 34.783 0.00 0.00 0.00 1.40
2728 9238 5.818136 ATACACTTGCAGCGACAATTAAT 57.182 34.783 0.00 0.00 0.00 1.40
2729 9239 6.918892 ATACACTTGCAGCGACAATTAATA 57.081 33.333 0.00 0.00 0.00 0.98
2730 9240 5.818136 ACACTTGCAGCGACAATTAATAT 57.182 34.783 0.00 0.00 0.00 1.28
2731 9241 6.918892 ACACTTGCAGCGACAATTAATATA 57.081 33.333 0.00 0.00 0.00 0.86
2732 9242 6.948353 ACACTTGCAGCGACAATTAATATAG 58.052 36.000 0.00 0.00 0.00 1.31
2733 9243 6.538742 ACACTTGCAGCGACAATTAATATAGT 59.461 34.615 0.00 0.00 0.00 2.12
2734 9244 7.065803 ACACTTGCAGCGACAATTAATATAGTT 59.934 33.333 0.00 0.00 0.00 2.24
2735 9245 7.910162 CACTTGCAGCGACAATTAATATAGTTT 59.090 33.333 0.00 0.00 0.00 2.66
2736 9246 9.104965 ACTTGCAGCGACAATTAATATAGTTTA 57.895 29.630 0.00 0.00 0.00 2.01
2737 9247 9.586150 CTTGCAGCGACAATTAATATAGTTTAG 57.414 33.333 0.00 0.00 0.00 1.85
2738 9248 8.083462 TGCAGCGACAATTAATATAGTTTAGG 57.917 34.615 0.00 0.00 0.00 2.69
2739 9249 7.015877 GCAGCGACAATTAATATAGTTTAGGC 58.984 38.462 0.00 0.00 0.00 3.93
2740 9250 7.095187 GCAGCGACAATTAATATAGTTTAGGCT 60.095 37.037 0.00 0.00 0.00 4.58
2741 9251 9.419297 CAGCGACAATTAATATAGTTTAGGCTA 57.581 33.333 0.00 0.00 0.00 3.93
2742 9252 9.420551 AGCGACAATTAATATAGTTTAGGCTAC 57.579 33.333 0.00 0.00 0.00 3.58
2743 9253 9.199982 GCGACAATTAATATAGTTTAGGCTACA 57.800 33.333 0.00 0.00 0.00 2.74
2752 9262 9.439500 AATATAGTTTAGGCTACAAAAACGTCA 57.561 29.630 0.00 0.00 37.99 4.35
2753 9263 7.733402 ATAGTTTAGGCTACAAAAACGTCAA 57.267 32.000 0.00 0.00 37.99 3.18
2754 9264 6.628919 AGTTTAGGCTACAAAAACGTCAAT 57.371 33.333 0.00 0.00 37.99 2.57
2755 9265 7.733402 AGTTTAGGCTACAAAAACGTCAATA 57.267 32.000 0.00 0.00 37.99 1.90
2756 9266 8.331730 AGTTTAGGCTACAAAAACGTCAATAT 57.668 30.769 0.00 0.00 37.99 1.28
2757 9267 8.789762 AGTTTAGGCTACAAAAACGTCAATATT 58.210 29.630 0.00 0.00 37.99 1.28
2758 9268 9.401873 GTTTAGGCTACAAAAACGTCAATATTT 57.598 29.630 0.00 0.00 0.00 1.40
2759 9269 9.968870 TTTAGGCTACAAAAACGTCAATATTTT 57.031 25.926 0.00 0.00 0.00 1.82
2760 9270 7.867445 AGGCTACAAAAACGTCAATATTTTG 57.133 32.000 16.82 16.82 45.14 2.44
2761 9271 6.866248 AGGCTACAAAAACGTCAATATTTTGG 59.134 34.615 20.54 9.47 44.37 3.28
2762 9272 6.643360 GGCTACAAAAACGTCAATATTTTGGT 59.357 34.615 20.54 9.48 44.37 3.67
2763 9273 7.808856 GGCTACAAAAACGTCAATATTTTGGTA 59.191 33.333 20.54 10.01 44.37 3.25
2764 9274 9.349145 GCTACAAAAACGTCAATATTTTGGTAT 57.651 29.630 20.54 7.77 44.37 2.73
2766 9276 8.527567 ACAAAAACGTCAATATTTTGGTATGG 57.472 30.769 20.54 2.11 44.37 2.74
2767 9277 8.361139 ACAAAAACGTCAATATTTTGGTATGGA 58.639 29.630 20.54 0.00 44.37 3.41
2768 9278 8.859156 CAAAAACGTCAATATTTTGGTATGGAG 58.141 33.333 12.48 0.00 39.29 3.86
2769 9279 6.693315 AACGTCAATATTTTGGTATGGAGG 57.307 37.500 0.00 0.00 33.44 4.30
2770 9280 5.751586 ACGTCAATATTTTGGTATGGAGGT 58.248 37.500 0.00 0.00 31.54 3.85
2771 9281 6.891388 ACGTCAATATTTTGGTATGGAGGTA 58.109 36.000 0.00 0.00 33.55 3.08
2772 9282 6.990349 ACGTCAATATTTTGGTATGGAGGTAG 59.010 38.462 0.00 0.00 33.55 3.18
2773 9283 6.990349 CGTCAATATTTTGGTATGGAGGTAGT 59.010 38.462 0.00 0.00 33.44 2.73
2774 9284 8.145767 CGTCAATATTTTGGTATGGAGGTAGTA 58.854 37.037 0.00 0.00 33.44 1.82
2780 9290 7.446106 TTTTGGTATGGAGGTAGTATCATGT 57.554 36.000 0.00 0.00 0.00 3.21
2781 9291 8.555896 TTTTGGTATGGAGGTAGTATCATGTA 57.444 34.615 0.00 0.00 0.00 2.29
2782 9292 8.736097 TTTGGTATGGAGGTAGTATCATGTAT 57.264 34.615 0.00 0.00 0.00 2.29
2783 9293 7.718334 TGGTATGGAGGTAGTATCATGTATG 57.282 40.000 0.00 0.00 0.00 2.39
2784 9294 6.154534 TGGTATGGAGGTAGTATCATGTATGC 59.845 42.308 0.00 0.00 0.00 3.14
2785 9295 5.683876 ATGGAGGTAGTATCATGTATGCC 57.316 43.478 0.00 0.00 0.00 4.40
2786 9296 3.838317 TGGAGGTAGTATCATGTATGCCC 59.162 47.826 0.00 0.00 0.00 5.36
2787 9297 4.097418 GGAGGTAGTATCATGTATGCCCT 58.903 47.826 0.00 0.00 0.00 5.19
2788 9298 4.081420 GGAGGTAGTATCATGTATGCCCTG 60.081 50.000 0.00 0.00 0.00 4.45
2789 9299 4.752063 AGGTAGTATCATGTATGCCCTGA 58.248 43.478 0.00 0.00 0.00 3.86
2790 9300 5.155161 AGGTAGTATCATGTATGCCCTGAA 58.845 41.667 0.00 0.00 0.00 3.02
2791 9301 5.606749 AGGTAGTATCATGTATGCCCTGAAA 59.393 40.000 0.00 0.00 0.00 2.69
2792 9302 5.701290 GGTAGTATCATGTATGCCCTGAAAC 59.299 44.000 0.00 0.00 0.00 2.78
2793 9303 5.636903 AGTATCATGTATGCCCTGAAACT 57.363 39.130 0.00 0.00 0.00 2.66
2794 9304 6.747414 AGTATCATGTATGCCCTGAAACTA 57.253 37.500 0.00 0.00 0.00 2.24
2795 9305 7.321717 AGTATCATGTATGCCCTGAAACTAT 57.678 36.000 0.00 0.00 0.00 2.12
2796 9306 8.435931 AGTATCATGTATGCCCTGAAACTATA 57.564 34.615 0.00 0.00 0.00 1.31
2797 9307 8.880244 AGTATCATGTATGCCCTGAAACTATAA 58.120 33.333 0.00 0.00 0.00 0.98
2798 9308 9.155975 GTATCATGTATGCCCTGAAACTATAAG 57.844 37.037 0.00 0.00 0.00 1.73
2799 9309 7.373617 TCATGTATGCCCTGAAACTATAAGA 57.626 36.000 0.00 0.00 0.00 2.10
2800 9310 7.977818 TCATGTATGCCCTGAAACTATAAGAT 58.022 34.615 0.00 0.00 0.00 2.40
2801 9311 8.097038 TCATGTATGCCCTGAAACTATAAGATC 58.903 37.037 0.00 0.00 0.00 2.75
2802 9312 7.373617 TGTATGCCCTGAAACTATAAGATCA 57.626 36.000 0.00 0.00 0.00 2.92
2803 9313 7.801104 TGTATGCCCTGAAACTATAAGATCAA 58.199 34.615 0.00 0.00 0.00 2.57
2804 9314 7.933577 TGTATGCCCTGAAACTATAAGATCAAG 59.066 37.037 0.00 0.00 0.00 3.02
2805 9315 6.313519 TGCCCTGAAACTATAAGATCAAGT 57.686 37.500 0.00 0.00 0.00 3.16
2806 9316 6.115446 TGCCCTGAAACTATAAGATCAAGTG 58.885 40.000 0.00 0.00 0.00 3.16
2807 9317 6.116126 GCCCTGAAACTATAAGATCAAGTGT 58.884 40.000 0.00 0.00 0.00 3.55
2808 9318 7.093068 TGCCCTGAAACTATAAGATCAAGTGTA 60.093 37.037 0.00 0.00 0.00 2.90
2809 9319 7.934120 GCCCTGAAACTATAAGATCAAGTGTAT 59.066 37.037 0.00 0.00 0.00 2.29
2843 9353 9.935241 TTATCTCAAGGCAAATACTATCATCTC 57.065 33.333 0.00 0.00 0.00 2.75
2844 9354 7.365497 TCTCAAGGCAAATACTATCATCTCA 57.635 36.000 0.00 0.00 0.00 3.27
2845 9355 7.795047 TCTCAAGGCAAATACTATCATCTCAA 58.205 34.615 0.00 0.00 0.00 3.02
2846 9356 7.930325 TCTCAAGGCAAATACTATCATCTCAAG 59.070 37.037 0.00 0.00 0.00 3.02
2847 9357 6.994496 TCAAGGCAAATACTATCATCTCAAGG 59.006 38.462 0.00 0.00 0.00 3.61
2848 9358 5.312079 AGGCAAATACTATCATCTCAAGGC 58.688 41.667 0.00 0.00 0.00 4.35
2849 9359 5.065914 GGCAAATACTATCATCTCAAGGCA 58.934 41.667 0.00 0.00 0.00 4.75
2850 9360 5.532406 GGCAAATACTATCATCTCAAGGCAA 59.468 40.000 0.00 0.00 0.00 4.52
2851 9361 6.039717 GGCAAATACTATCATCTCAAGGCAAA 59.960 38.462 0.00 0.00 0.00 3.68
2852 9362 7.255730 GGCAAATACTATCATCTCAAGGCAAAT 60.256 37.037 0.00 0.00 0.00 2.32
2853 9363 8.786898 GCAAATACTATCATCTCAAGGCAAATA 58.213 33.333 0.00 0.00 0.00 1.40
2855 9365 9.851686 AAATACTATCATCTCAAGGCAAATACA 57.148 29.630 0.00 0.00 0.00 2.29
2856 9366 8.839310 ATACTATCATCTCAAGGCAAATACAC 57.161 34.615 0.00 0.00 0.00 2.90
2857 9367 6.893583 ACTATCATCTCAAGGCAAATACACT 58.106 36.000 0.00 0.00 0.00 3.55
2858 9368 8.023021 ACTATCATCTCAAGGCAAATACACTA 57.977 34.615 0.00 0.00 0.00 2.74
2859 9369 8.486210 ACTATCATCTCAAGGCAAATACACTAA 58.514 33.333 0.00 0.00 0.00 2.24
2860 9370 7.798596 ATCATCTCAAGGCAAATACACTAAG 57.201 36.000 0.00 0.00 0.00 2.18
2861 9371 6.115446 TCATCTCAAGGCAAATACACTAAGG 58.885 40.000 0.00 0.00 0.00 2.69
2862 9372 5.755409 TCTCAAGGCAAATACACTAAGGA 57.245 39.130 0.00 0.00 0.00 3.36
2863 9373 5.488341 TCTCAAGGCAAATACACTAAGGAC 58.512 41.667 0.00 0.00 0.00 3.85
2864 9374 5.012664 TCTCAAGGCAAATACACTAAGGACA 59.987 40.000 0.00 0.00 0.00 4.02
2865 9375 5.626142 TCAAGGCAAATACACTAAGGACAA 58.374 37.500 0.00 0.00 0.00 3.18
2866 9376 6.245408 TCAAGGCAAATACACTAAGGACAAT 58.755 36.000 0.00 0.00 0.00 2.71
2867 9377 6.374333 TCAAGGCAAATACACTAAGGACAATC 59.626 38.462 0.00 0.00 0.00 2.67
2868 9378 5.815581 AGGCAAATACACTAAGGACAATCA 58.184 37.500 0.00 0.00 0.00 2.57
2869 9379 5.882557 AGGCAAATACACTAAGGACAATCAG 59.117 40.000 0.00 0.00 0.00 2.90
2870 9380 5.449177 GGCAAATACACTAAGGACAATCAGC 60.449 44.000 0.00 0.00 0.00 4.26
2871 9381 5.123820 GCAAATACACTAAGGACAATCAGCA 59.876 40.000 0.00 0.00 0.00 4.41
2872 9382 6.546395 CAAATACACTAAGGACAATCAGCAC 58.454 40.000 0.00 0.00 0.00 4.40
2873 9383 3.769739 ACACTAAGGACAATCAGCACA 57.230 42.857 0.00 0.00 0.00 4.57
2874 9384 4.085357 ACACTAAGGACAATCAGCACAA 57.915 40.909 0.00 0.00 0.00 3.33
2875 9385 3.815401 ACACTAAGGACAATCAGCACAAC 59.185 43.478 0.00 0.00 0.00 3.32
2876 9386 3.814842 CACTAAGGACAATCAGCACAACA 59.185 43.478 0.00 0.00 0.00 3.33
2877 9387 3.815401 ACTAAGGACAATCAGCACAACAC 59.185 43.478 0.00 0.00 0.00 3.32
2878 9388 1.609208 AGGACAATCAGCACAACACC 58.391 50.000 0.00 0.00 0.00 4.16
2879 9389 1.143684 AGGACAATCAGCACAACACCT 59.856 47.619 0.00 0.00 0.00 4.00
2880 9390 2.371841 AGGACAATCAGCACAACACCTA 59.628 45.455 0.00 0.00 0.00 3.08
2881 9391 2.484264 GGACAATCAGCACAACACCTAC 59.516 50.000 0.00 0.00 0.00 3.18
2882 9392 3.403038 GACAATCAGCACAACACCTACT 58.597 45.455 0.00 0.00 0.00 2.57
2883 9393 3.141398 ACAATCAGCACAACACCTACTG 58.859 45.455 0.00 0.00 0.00 2.74
2884 9394 3.181455 ACAATCAGCACAACACCTACTGA 60.181 43.478 0.00 0.00 41.28 3.41
2885 9395 3.769739 ATCAGCACAACACCTACTGAA 57.230 42.857 0.00 0.00 40.49 3.02
2886 9396 3.552132 TCAGCACAACACCTACTGAAA 57.448 42.857 0.00 0.00 34.59 2.69
2887 9397 3.466836 TCAGCACAACACCTACTGAAAG 58.533 45.455 0.00 0.00 42.29 2.62
2888 9398 3.133901 TCAGCACAACACCTACTGAAAGA 59.866 43.478 0.00 0.00 37.43 2.52
2889 9399 3.496130 CAGCACAACACCTACTGAAAGAG 59.504 47.826 0.00 0.00 37.43 2.85
2890 9400 3.388024 AGCACAACACCTACTGAAAGAGA 59.612 43.478 0.00 0.00 37.43 3.10
2891 9401 3.495001 GCACAACACCTACTGAAAGAGAC 59.505 47.826 0.00 0.00 37.43 3.36
2892 9402 4.693283 CACAACACCTACTGAAAGAGACA 58.307 43.478 0.00 0.00 37.43 3.41
2893 9403 4.747108 CACAACACCTACTGAAAGAGACAG 59.253 45.833 0.00 0.00 40.68 3.51
2916 9426 4.454728 TCACAGCAAAAAGAATATGCCC 57.545 40.909 0.00 0.00 40.93 5.36
2924 9434 6.013812 AGCAAAAAGAATATGCCCCAAAACTA 60.014 34.615 0.00 0.00 40.93 2.24
2926 9436 7.336679 GCAAAAAGAATATGCCCCAAAACTATT 59.663 33.333 0.00 0.00 34.03 1.73
2933 9443 3.963129 TGCCCCAAAACTATTAGACCAG 58.037 45.455 0.00 0.00 0.00 4.00
2934 9444 2.688446 GCCCCAAAACTATTAGACCAGC 59.312 50.000 0.00 0.00 0.00 4.85
2935 9445 3.876156 GCCCCAAAACTATTAGACCAGCA 60.876 47.826 0.00 0.00 0.00 4.41
2936 9446 3.947834 CCCCAAAACTATTAGACCAGCAG 59.052 47.826 0.00 0.00 0.00 4.24
2954 9464 7.840342 CCAGCAGGTGTAGAATATGATTATC 57.160 40.000 0.00 0.00 0.00 1.75
2957 9467 8.309656 CAGCAGGTGTAGAATATGATTATCTCA 58.690 37.037 0.00 0.00 38.53 3.27
3002 10880 2.853662 GCTATCGAGCTGCTTGCAATTG 60.854 50.000 12.16 0.00 45.98 2.32
3003 10881 0.179145 ATCGAGCTGCTTGCAATTGC 60.179 50.000 23.69 23.69 45.94 3.56
3004 10882 1.211969 CGAGCTGCTTGCAATTGCT 59.788 52.632 29.37 17.06 45.94 3.91
3005 10883 0.388134 CGAGCTGCTTGCAATTGCTT 60.388 50.000 29.37 7.80 45.94 3.91
3062 10985 4.350368 TGGTGAATTCTGCTTGACACTA 57.650 40.909 7.05 0.00 0.00 2.74
3063 10986 4.318332 TGGTGAATTCTGCTTGACACTAG 58.682 43.478 7.05 0.00 0.00 2.57
3073 10996 5.476945 TCTGCTTGACACTAGACACAGATAA 59.523 40.000 0.00 0.00 0.00 1.75
3075 10998 7.339466 TCTGCTTGACACTAGACACAGATAATA 59.661 37.037 0.00 0.00 0.00 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 1563 7.948357 AGCTACATACGAAACATAATAGGTGA 58.052 34.615 0.00 0.00 0.00 4.02
46 1565 8.027771 GCTAGCTACATACGAAACATAATAGGT 58.972 37.037 7.70 0.00 0.00 3.08
47 1566 7.488471 GGCTAGCTACATACGAAACATAATAGG 59.512 40.741 15.72 0.00 0.00 2.57
53 1572 4.099573 ACAGGCTAGCTACATACGAAACAT 59.900 41.667 15.72 0.00 0.00 2.71
124 1643 7.703058 AACCGGACAAAGATTTCAAGAATAT 57.297 32.000 9.46 0.00 0.00 1.28
145 1664 3.366374 GCACTAGAAGGATGCAACAAACC 60.366 47.826 0.00 0.00 39.23 3.27
211 1730 5.001232 CCGTGTCCCAACCCAAATATATAG 58.999 45.833 0.00 0.00 0.00 1.31
229 1748 4.186159 CACCGAAAATAATCCTACCGTGT 58.814 43.478 0.00 0.00 0.00 4.49
230 1749 3.001939 GCACCGAAAATAATCCTACCGTG 59.998 47.826 0.00 0.00 0.00 4.94
233 1752 5.278315 GGATTGCACCGAAAATAATCCTACC 60.278 44.000 0.00 0.00 42.10 3.18
257 1776 2.816087 CTCAAAGTGACATGTCCCTTGG 59.184 50.000 22.01 19.39 27.99 3.61
271 1790 2.820059 TCAGATCGTGCACTCAAAGT 57.180 45.000 16.19 0.00 0.00 2.66
272 1791 4.259570 CGTAATCAGATCGTGCACTCAAAG 60.260 45.833 16.19 0.00 0.00 2.77
275 1796 2.479560 CCGTAATCAGATCGTGCACTCA 60.480 50.000 16.19 0.95 0.00 3.41
294 1815 2.464189 CAACGAAACGACTCGCCG 59.536 61.111 10.12 2.87 42.69 6.46
295 1816 1.615107 CTCCAACGAAACGACTCGCC 61.615 60.000 10.12 0.00 42.69 5.54
301 1822 1.866237 GCATGCTCCAACGAAACGA 59.134 52.632 11.37 0.00 0.00 3.85
302 1823 1.509787 CGCATGCTCCAACGAAACG 60.510 57.895 17.13 0.00 0.00 3.60
303 1824 0.452784 GACGCATGCTCCAACGAAAC 60.453 55.000 17.13 0.00 0.00 2.78
304 1825 0.882484 TGACGCATGCTCCAACGAAA 60.882 50.000 17.13 0.00 0.00 3.46
305 1826 1.301322 TGACGCATGCTCCAACGAA 60.301 52.632 17.13 0.00 0.00 3.85
333 1854 9.632638 ACATATATAAAAATGAAGCACTCCAGT 57.367 29.630 0.00 0.00 0.00 4.00
373 1898 7.065324 CGCCTAAACTAATTAGTGTGAATCCAA 59.935 37.037 18.70 0.00 39.56 3.53
378 1903 4.632688 GGCGCCTAAACTAATTAGTGTGAA 59.367 41.667 22.15 0.00 39.56 3.18
382 1907 3.000925 CGTGGCGCCTAAACTAATTAGTG 59.999 47.826 29.70 7.51 39.56 2.74
426 1955 2.034179 TGACGACATGGAGCCGTTATAG 59.966 50.000 0.00 0.00 36.60 1.31
444 1973 3.799755 GCCGGTTGGTGCGATGAC 61.800 66.667 1.90 0.00 37.67 3.06
460 1989 5.474825 GCTATGTATGGGTAGAGAAGAAGC 58.525 45.833 0.00 0.00 0.00 3.86
467 1996 5.337894 CCATCTTGGCTATGTATGGGTAGAG 60.338 48.000 0.00 0.00 34.66 2.43
468 1997 4.532126 CCATCTTGGCTATGTATGGGTAGA 59.468 45.833 0.00 0.00 34.66 2.59
469 1998 4.836825 CCATCTTGGCTATGTATGGGTAG 58.163 47.826 0.00 0.00 34.66 3.18
539 2070 0.460987 GAACTCATCGGTGGAGCTGG 60.461 60.000 0.00 0.00 35.79 4.85
548 2079 0.803768 CGCTCTGGTGAACTCATCGG 60.804 60.000 0.00 0.00 34.69 4.18
576 2107 1.812686 TTCCGGTGAACTCTCGGTGG 61.813 60.000 0.00 0.00 43.75 4.61
586 2117 3.277211 CTCCGCGTCTTCCGGTGAA 62.277 63.158 4.92 0.00 45.71 3.18
593 2124 1.800713 GTTCGACCTCCGCGTCTTC 60.801 63.158 4.92 0.00 38.37 2.87
594 2125 2.079020 TTGTTCGACCTCCGCGTCTT 62.079 55.000 4.92 0.00 38.37 3.01
601 2132 2.028020 AGAGGACATTTGTTCGACCTCC 60.028 50.000 10.01 0.00 43.12 4.30
602 2133 3.254892 GAGAGGACATTTGTTCGACCTC 58.745 50.000 6.38 6.38 42.64 3.85
603 2134 2.352814 CGAGAGGACATTTGTTCGACCT 60.353 50.000 0.00 0.00 29.04 3.85
604 2135 1.993370 CGAGAGGACATTTGTTCGACC 59.007 52.381 0.00 0.00 29.04 4.79
620 2151 3.153781 TCCGCATCATGCCCGAGA 61.154 61.111 3.38 0.00 41.12 4.04
621 2152 2.087462 TACTCCGCATCATGCCCGAG 62.087 60.000 16.48 16.48 41.12 4.63
622 2153 1.681486 TTACTCCGCATCATGCCCGA 61.681 55.000 3.38 0.00 41.12 5.14
623 2154 1.224069 CTTACTCCGCATCATGCCCG 61.224 60.000 3.38 0.00 41.12 6.13
626 2157 4.179926 TCTATCTTACTCCGCATCATGC 57.820 45.455 0.00 0.00 40.69 4.06
627 2158 5.958955 TCATCTATCTTACTCCGCATCATG 58.041 41.667 0.00 0.00 0.00 3.07
628 2159 6.435591 TCTTCATCTATCTTACTCCGCATCAT 59.564 38.462 0.00 0.00 0.00 2.45
629 2160 5.770162 TCTTCATCTATCTTACTCCGCATCA 59.230 40.000 0.00 0.00 0.00 3.07
630 2161 6.260870 TCTTCATCTATCTTACTCCGCATC 57.739 41.667 0.00 0.00 0.00 3.91
633 2164 6.150307 TCTCATCTTCATCTATCTTACTCCGC 59.850 42.308 0.00 0.00 0.00 5.54
635 2166 9.023962 ACATCTCATCTTCATCTATCTTACTCC 57.976 37.037 0.00 0.00 0.00 3.85
636 2167 9.844790 CACATCTCATCTTCATCTATCTTACTC 57.155 37.037 0.00 0.00 0.00 2.59
637 2168 9.365906 ACACATCTCATCTTCATCTATCTTACT 57.634 33.333 0.00 0.00 0.00 2.24
669 4063 2.023673 CCTTCTCCGGCATTGCAAATA 58.976 47.619 11.39 0.00 0.00 1.40
677 4076 3.584406 TGAATCATATCCTTCTCCGGCAT 59.416 43.478 0.00 0.00 0.00 4.40
678 4077 2.972021 TGAATCATATCCTTCTCCGGCA 59.028 45.455 0.00 0.00 0.00 5.69
723 4142 3.451141 TGCAACAAACCAGGACAAATC 57.549 42.857 0.00 0.00 0.00 2.17
724 4143 3.244181 GGATGCAACAAACCAGGACAAAT 60.244 43.478 0.00 0.00 0.00 2.32
759 4178 9.764363 TCTACTGGTTACATAGCATAATTGAAG 57.236 33.333 0.00 0.00 32.98 3.02
761 4180 9.710900 CATCTACTGGTTACATAGCATAATTGA 57.289 33.333 0.00 0.00 32.98 2.57
960 4644 1.758514 GGGAGCAGGATCTCGTGGA 60.759 63.158 0.00 0.00 33.98 4.02
1007 4691 1.302192 GAAGCTGGTTGGTGCGGTA 60.302 57.895 0.00 0.00 0.00 4.02
1146 4858 2.026879 GAGCTCTCGGTGGCGATC 59.973 66.667 6.43 0.00 0.00 3.69
1147 4859 2.755876 TGAGCTCTCGGTGGCGAT 60.756 61.111 16.19 0.00 0.00 4.58
1148 4860 3.749064 GTGAGCTCTCGGTGGCGA 61.749 66.667 16.19 0.00 0.00 5.54
1149 4861 4.803426 GGTGAGCTCTCGGTGGCG 62.803 72.222 16.19 0.00 0.00 5.69
1150 4862 3.655810 CTGGTGAGCTCTCGGTGGC 62.656 68.421 16.19 0.00 0.00 5.01
1151 4863 1.536073 TTCTGGTGAGCTCTCGGTGG 61.536 60.000 16.19 2.90 0.00 4.61
1250 4965 1.626825 TGAACCAGTAGCCCTTGTACC 59.373 52.381 0.00 0.00 0.00 3.34
1328 5043 3.822192 TGGCGAGGACGATGTCGG 61.822 66.667 7.38 0.00 44.95 4.79
1397 5112 1.885388 CTGTGGCGTGAACGGTTGA 60.885 57.895 0.00 0.00 40.23 3.18
1404 5119 4.680237 CCGAGGCTGTGGCGTGAA 62.680 66.667 0.00 0.00 39.81 3.18
1426 5147 4.394712 GGTGAGGAGCGGGTGGTG 62.395 72.222 0.00 0.00 0.00 4.17
1832 6593 1.326213 CCTCCTCACGACCTGCATCT 61.326 60.000 0.00 0.00 0.00 2.90
1834 6595 3.023949 GCCTCCTCACGACCTGCAT 62.024 63.158 0.00 0.00 0.00 3.96
1917 6678 1.742880 GAAGCTGCACATCCTCGCA 60.743 57.895 1.02 0.00 36.52 5.10
2154 6918 4.536765 AGAAGCAGAGTGGAAAGGAAAAA 58.463 39.130 0.00 0.00 0.00 1.94
2192 6956 5.993748 AAACCACAATAACCAACATAGGG 57.006 39.130 0.00 0.00 0.00 3.53
2196 6960 9.883142 CCATAATTAAACCACAATAACCAACAT 57.117 29.630 0.00 0.00 0.00 2.71
2197 6961 8.314751 CCCATAATTAAACCACAATAACCAACA 58.685 33.333 0.00 0.00 0.00 3.33
2198 6962 8.532819 TCCCATAATTAAACCACAATAACCAAC 58.467 33.333 0.00 0.00 0.00 3.77
2199 6963 8.666129 TCCCATAATTAAACCACAATAACCAA 57.334 30.769 0.00 0.00 0.00 3.67
2219 7049 8.470002 GCTTGACTGTTTAATTCTTATTCCCAT 58.530 33.333 0.00 0.00 0.00 4.00
2282 7119 3.469008 ACTGCACAGCAACTAGTTGTA 57.531 42.857 30.90 9.41 39.90 2.41
2291 7142 3.523606 AAAATCACAACTGCACAGCAA 57.476 38.095 0.00 0.00 38.41 3.91
2302 7153 8.918202 AGTTTCAGATACCACTAAAATCACAA 57.082 30.769 0.00 0.00 0.00 3.33
2318 7169 6.962182 TCATCAATTCACCCTAGTTTCAGAT 58.038 36.000 0.00 0.00 0.00 2.90
2320 7171 6.656693 ACTTCATCAATTCACCCTAGTTTCAG 59.343 38.462 0.00 0.00 0.00 3.02
2322 7173 6.655003 TCACTTCATCAATTCACCCTAGTTTC 59.345 38.462 0.00 0.00 0.00 2.78
2323 7174 6.542821 TCACTTCATCAATTCACCCTAGTTT 58.457 36.000 0.00 0.00 0.00 2.66
2324 7175 6.126863 TCACTTCATCAATTCACCCTAGTT 57.873 37.500 0.00 0.00 0.00 2.24
2325 7176 5.762179 TCACTTCATCAATTCACCCTAGT 57.238 39.130 0.00 0.00 0.00 2.57
2326 7177 6.426328 GCTATCACTTCATCAATTCACCCTAG 59.574 42.308 0.00 0.00 0.00 3.02
2327 7178 6.126796 TGCTATCACTTCATCAATTCACCCTA 60.127 38.462 0.00 0.00 0.00 3.53
2329 7180 4.883585 TGCTATCACTTCATCAATTCACCC 59.116 41.667 0.00 0.00 0.00 4.61
2330 7181 5.008415 CCTGCTATCACTTCATCAATTCACC 59.992 44.000 0.00 0.00 0.00 4.02
2332 7183 5.748402 ACCTGCTATCACTTCATCAATTCA 58.252 37.500 0.00 0.00 0.00 2.57
2333 7184 6.317140 TCAACCTGCTATCACTTCATCAATTC 59.683 38.462 0.00 0.00 0.00 2.17
2335 7186 5.748402 TCAACCTGCTATCACTTCATCAAT 58.252 37.500 0.00 0.00 0.00 2.57
2336 7187 5.164620 TCAACCTGCTATCACTTCATCAA 57.835 39.130 0.00 0.00 0.00 2.57
2337 7188 4.824479 TCAACCTGCTATCACTTCATCA 57.176 40.909 0.00 0.00 0.00 3.07
2338 7189 6.423302 CACTATCAACCTGCTATCACTTCATC 59.577 42.308 0.00 0.00 0.00 2.92
2339 7190 6.098838 TCACTATCAACCTGCTATCACTTCAT 59.901 38.462 0.00 0.00 0.00 2.57
2341 7192 5.907207 TCACTATCAACCTGCTATCACTTC 58.093 41.667 0.00 0.00 0.00 3.01
2344 7195 6.763135 TCATTTCACTATCAACCTGCTATCAC 59.237 38.462 0.00 0.00 0.00 3.06
2347 7198 7.281774 CACTTCATTTCACTATCAACCTGCTAT 59.718 37.037 0.00 0.00 0.00 2.97
2348 7199 6.595326 CACTTCATTTCACTATCAACCTGCTA 59.405 38.462 0.00 0.00 0.00 3.49
2349 7200 5.413833 CACTTCATTTCACTATCAACCTGCT 59.586 40.000 0.00 0.00 0.00 4.24
2350 7201 5.412594 TCACTTCATTTCACTATCAACCTGC 59.587 40.000 0.00 0.00 0.00 4.85
2352 7203 5.639506 CGTCACTTCATTTCACTATCAACCT 59.360 40.000 0.00 0.00 0.00 3.50
2353 7204 5.408604 ACGTCACTTCATTTCACTATCAACC 59.591 40.000 0.00 0.00 0.00 3.77
2354 7205 6.299604 CACGTCACTTCATTTCACTATCAAC 58.700 40.000 0.00 0.00 0.00 3.18
2356 7207 4.388773 GCACGTCACTTCATTTCACTATCA 59.611 41.667 0.00 0.00 0.00 2.15
2357 7208 4.627467 AGCACGTCACTTCATTTCACTATC 59.373 41.667 0.00 0.00 0.00 2.08
2366 7217 0.036952 CCAGGAGCACGTCACTTCAT 60.037 55.000 0.00 0.00 0.00 2.57
2368 7219 1.374758 CCCAGGAGCACGTCACTTC 60.375 63.158 0.00 0.00 0.00 3.01
2369 7220 1.194781 ATCCCAGGAGCACGTCACTT 61.195 55.000 0.00 0.00 0.00 3.16
2372 7223 1.040646 GATATCCCAGGAGCACGTCA 58.959 55.000 0.00 0.00 0.00 4.35
2373 7224 1.040646 TGATATCCCAGGAGCACGTC 58.959 55.000 0.00 0.00 0.00 4.34
2374 7225 1.414181 CTTGATATCCCAGGAGCACGT 59.586 52.381 0.00 0.00 0.00 4.49
2375 7226 1.414181 ACTTGATATCCCAGGAGCACG 59.586 52.381 0.00 0.00 0.00 5.34
2376 7227 3.567478 AACTTGATATCCCAGGAGCAC 57.433 47.619 0.00 0.00 0.00 4.40
2381 7232 5.989477 TCACTGTAAACTTGATATCCCAGG 58.011 41.667 0.00 0.00 0.00 4.45
2390 7241 7.907389 ACAATCCTATCTCACTGTAAACTTGA 58.093 34.615 0.00 0.00 0.00 3.02
2408 7265 4.167319 AGCCCCATTTGTTTTACAATCCT 58.833 39.130 0.00 0.00 38.00 3.24
2409 7266 4.020662 TGAGCCCCATTTGTTTTACAATCC 60.021 41.667 0.00 0.00 38.00 3.01
2410 7267 5.146010 TGAGCCCCATTTGTTTTACAATC 57.854 39.130 0.00 0.00 38.00 2.67
2411 7268 5.559148 TTGAGCCCCATTTGTTTTACAAT 57.441 34.783 0.00 0.00 38.00 2.71
2412 7269 5.129485 TCTTTGAGCCCCATTTGTTTTACAA 59.871 36.000 0.00 0.00 36.11 2.41
2413 7270 4.651503 TCTTTGAGCCCCATTTGTTTTACA 59.348 37.500 0.00 0.00 0.00 2.41
2414 7271 5.208463 TCTTTGAGCCCCATTTGTTTTAC 57.792 39.130 0.00 0.00 0.00 2.01
2415 7272 6.269769 AGAATCTTTGAGCCCCATTTGTTTTA 59.730 34.615 0.00 0.00 0.00 1.52
2416 7273 4.980339 ATCTTTGAGCCCCATTTGTTTT 57.020 36.364 0.00 0.00 0.00 2.43
2417 7274 4.594491 AGAATCTTTGAGCCCCATTTGTTT 59.406 37.500 0.00 0.00 0.00 2.83
2418 7275 4.020839 CAGAATCTTTGAGCCCCATTTGTT 60.021 41.667 0.00 0.00 0.00 2.83
2419 7276 3.512724 CAGAATCTTTGAGCCCCATTTGT 59.487 43.478 0.00 0.00 0.00 2.83
2420 7277 3.118884 CCAGAATCTTTGAGCCCCATTTG 60.119 47.826 0.00 0.00 0.00 2.32
2421 7278 3.102204 CCAGAATCTTTGAGCCCCATTT 58.898 45.455 0.00 0.00 0.00 2.32
2422 7279 2.625087 CCCAGAATCTTTGAGCCCCATT 60.625 50.000 0.00 0.00 0.00 3.16
2423 7280 1.063417 CCCAGAATCTTTGAGCCCCAT 60.063 52.381 0.00 0.00 0.00 4.00
2424 7281 0.332632 CCCAGAATCTTTGAGCCCCA 59.667 55.000 0.00 0.00 0.00 4.96
2425 7282 0.625849 TCCCAGAATCTTTGAGCCCC 59.374 55.000 0.00 0.00 0.00 5.80
2426 7283 1.561542 TCTCCCAGAATCTTTGAGCCC 59.438 52.381 1.93 0.00 0.00 5.19
2427 7284 3.277715 CTTCTCCCAGAATCTTTGAGCC 58.722 50.000 1.93 0.00 33.13 4.70
2428 7285 2.682352 GCTTCTCCCAGAATCTTTGAGC 59.318 50.000 1.93 0.00 33.13 4.26
2429 7286 3.940221 CAGCTTCTCCCAGAATCTTTGAG 59.060 47.826 0.00 0.62 33.13 3.02
2430 7287 3.307975 CCAGCTTCTCCCAGAATCTTTGA 60.308 47.826 0.00 0.00 33.13 2.69
2431 7288 3.015327 CCAGCTTCTCCCAGAATCTTTG 58.985 50.000 0.00 0.00 33.13 2.77
2432 7289 2.025510 CCCAGCTTCTCCCAGAATCTTT 60.026 50.000 0.00 0.00 33.13 2.52
2433 7290 1.563410 CCCAGCTTCTCCCAGAATCTT 59.437 52.381 0.00 0.00 33.13 2.40
2434 7291 1.211456 CCCAGCTTCTCCCAGAATCT 58.789 55.000 0.00 0.00 33.13 2.40
2435 7292 0.915364 ACCCAGCTTCTCCCAGAATC 59.085 55.000 0.00 0.00 33.13 2.52
2436 7293 2.122768 CTACCCAGCTTCTCCCAGAAT 58.877 52.381 0.00 0.00 33.13 2.40
2437 7294 1.573108 CTACCCAGCTTCTCCCAGAA 58.427 55.000 0.00 0.00 32.50 3.02
2438 7295 0.325671 CCTACCCAGCTTCTCCCAGA 60.326 60.000 0.00 0.00 0.00 3.86
2439 7296 1.341156 CCCTACCCAGCTTCTCCCAG 61.341 65.000 0.00 0.00 0.00 4.45
2440 7297 1.306997 CCCTACCCAGCTTCTCCCA 60.307 63.158 0.00 0.00 0.00 4.37
2441 7298 2.073101 CCCCTACCCAGCTTCTCCC 61.073 68.421 0.00 0.00 0.00 4.30
2442 7299 1.307084 ACCCCTACCCAGCTTCTCC 60.307 63.158 0.00 0.00 0.00 3.71
2443 7300 1.677637 CGACCCCTACCCAGCTTCTC 61.678 65.000 0.00 0.00 0.00 2.87
2444 7301 1.686110 CGACCCCTACCCAGCTTCT 60.686 63.158 0.00 0.00 0.00 2.85
2445 7302 2.732619 CCGACCCCTACCCAGCTTC 61.733 68.421 0.00 0.00 0.00 3.86
2446 7303 2.547123 ATCCGACCCCTACCCAGCTT 62.547 60.000 0.00 0.00 0.00 3.74
2447 7304 2.547123 AATCCGACCCCTACCCAGCT 62.547 60.000 0.00 0.00 0.00 4.24
2448 7305 2.041206 GAATCCGACCCCTACCCAGC 62.041 65.000 0.00 0.00 0.00 4.85
2449 7306 0.398664 AGAATCCGACCCCTACCCAG 60.399 60.000 0.00 0.00 0.00 4.45
2450 7307 0.689745 CAGAATCCGACCCCTACCCA 60.690 60.000 0.00 0.00 0.00 4.51
2451 7308 1.408453 CCAGAATCCGACCCCTACCC 61.408 65.000 0.00 0.00 0.00 3.69
2452 7309 1.408453 CCCAGAATCCGACCCCTACC 61.408 65.000 0.00 0.00 0.00 3.18
2453 7310 0.398098 TCCCAGAATCCGACCCCTAC 60.398 60.000 0.00 0.00 0.00 3.18
2454 7311 0.105658 CTCCCAGAATCCGACCCCTA 60.106 60.000 0.00 0.00 0.00 3.53
2455 7312 1.383248 CTCCCAGAATCCGACCCCT 60.383 63.158 0.00 0.00 0.00 4.79
2456 7313 0.981277 TTCTCCCAGAATCCGACCCC 60.981 60.000 0.00 0.00 0.00 4.95
2457 7314 1.132500 ATTCTCCCAGAATCCGACCC 58.868 55.000 0.00 0.00 40.75 4.46
2480 7337 3.057033 CCCAGTTCTTTTGCCAGAATCTG 60.057 47.826 2.68 2.68 35.23 2.90
2481 7338 3.160269 CCCAGTTCTTTTGCCAGAATCT 58.840 45.455 0.00 0.00 35.23 2.40
2482 7339 2.353109 GCCCAGTTCTTTTGCCAGAATC 60.353 50.000 0.00 0.00 35.23 2.52
2483 7340 1.620323 GCCCAGTTCTTTTGCCAGAAT 59.380 47.619 0.00 0.00 35.23 2.40
2484 7341 1.039856 GCCCAGTTCTTTTGCCAGAA 58.960 50.000 0.00 0.00 0.00 3.02
2485 7342 0.827507 GGCCCAGTTCTTTTGCCAGA 60.828 55.000 0.00 0.00 41.76 3.86
2486 7343 1.667722 GGCCCAGTTCTTTTGCCAG 59.332 57.895 0.00 0.00 41.76 4.85
2487 7344 2.199652 CGGCCCAGTTCTTTTGCCA 61.200 57.895 0.00 0.00 42.27 4.92
2488 7345 1.460273 TTCGGCCCAGTTCTTTTGCC 61.460 55.000 0.00 0.00 38.74 4.52
2489 7346 0.039165 CTTCGGCCCAGTTCTTTTGC 60.039 55.000 0.00 0.00 0.00 3.68
2490 7347 1.001378 CACTTCGGCCCAGTTCTTTTG 60.001 52.381 0.00 0.00 0.00 2.44
2491 7348 1.133915 TCACTTCGGCCCAGTTCTTTT 60.134 47.619 0.00 0.00 0.00 2.27
2492 7349 0.472471 TCACTTCGGCCCAGTTCTTT 59.528 50.000 0.00 0.00 0.00 2.52
2493 7350 0.693049 ATCACTTCGGCCCAGTTCTT 59.307 50.000 0.00 0.00 0.00 2.52
2494 7351 0.036010 CATCACTTCGGCCCAGTTCT 60.036 55.000 0.00 0.00 0.00 3.01
2495 7352 0.321653 ACATCACTTCGGCCCAGTTC 60.322 55.000 0.00 0.00 0.00 3.01
2496 7353 0.606401 CACATCACTTCGGCCCAGTT 60.606 55.000 0.00 0.00 0.00 3.16
2497 7354 1.003355 CACATCACTTCGGCCCAGT 60.003 57.895 0.00 0.00 0.00 4.00
2498 7355 2.401766 GCACATCACTTCGGCCCAG 61.402 63.158 0.00 0.00 0.00 4.45
2499 7356 2.359850 GCACATCACTTCGGCCCA 60.360 61.111 0.00 0.00 0.00 5.36
2500 7357 3.134127 GGCACATCACTTCGGCCC 61.134 66.667 0.00 0.00 38.70 5.80
2501 7358 2.359850 TGGCACATCACTTCGGCC 60.360 61.111 0.00 0.00 44.82 6.13
2502 7359 1.308069 ATGTGGCACATCACTTCGGC 61.308 55.000 26.78 0.00 44.52 5.54
2503 7360 2.022764 TATGTGGCACATCACTTCGG 57.977 50.000 34.48 0.00 44.52 4.30
2504 7361 5.106948 GGATTATATGTGGCACATCACTTCG 60.107 44.000 34.48 0.00 44.52 3.79
2541 7403 3.199442 TGTCCCCTCTATGAAGAACCA 57.801 47.619 0.00 0.00 0.00 3.67
2546 7408 5.119694 GCTAAGTTTGTCCCCTCTATGAAG 58.880 45.833 0.00 0.00 0.00 3.02
2586 7448 5.533154 ACCACCTATGAAATTGTCGTTGAAA 59.467 36.000 0.00 0.00 0.00 2.69
2593 7455 8.956426 TCATTTTCTACCACCTATGAAATTGTC 58.044 33.333 0.00 0.00 34.34 3.18
2601 7463 7.921786 TTGTTCTCATTTTCTACCACCTATG 57.078 36.000 0.00 0.00 0.00 2.23
2652 9159 3.824443 TGTCCTATCCGATCGATGCTTTA 59.176 43.478 18.66 0.00 31.92 1.85
2657 9164 4.142578 CCTTAGTGTCCTATCCGATCGATG 60.143 50.000 18.66 0.00 31.92 3.84
2660 9167 3.409570 TCCTTAGTGTCCTATCCGATCG 58.590 50.000 8.51 8.51 0.00 3.69
2664 9171 5.080969 TGTTTTCCTTAGTGTCCTATCCG 57.919 43.478 0.00 0.00 0.00 4.18
2668 9175 5.071250 TCTGCTTGTTTTCCTTAGTGTCCTA 59.929 40.000 0.00 0.00 0.00 2.94
2670 9177 4.134563 TCTGCTTGTTTTCCTTAGTGTCC 58.865 43.478 0.00 0.00 0.00 4.02
2671 9178 5.511571 GTTCTGCTTGTTTTCCTTAGTGTC 58.488 41.667 0.00 0.00 0.00 3.67
2672 9179 4.035208 CGTTCTGCTTGTTTTCCTTAGTGT 59.965 41.667 0.00 0.00 0.00 3.55
2673 9180 4.035208 ACGTTCTGCTTGTTTTCCTTAGTG 59.965 41.667 0.00 0.00 0.00 2.74
2674 9181 4.196971 ACGTTCTGCTTGTTTTCCTTAGT 58.803 39.130 0.00 0.00 0.00 2.24
2675 9182 4.511826 AGACGTTCTGCTTGTTTTCCTTAG 59.488 41.667 0.00 0.00 0.00 2.18
2676 9183 4.448210 AGACGTTCTGCTTGTTTTCCTTA 58.552 39.130 0.00 0.00 0.00 2.69
2677 9184 3.279434 AGACGTTCTGCTTGTTTTCCTT 58.721 40.909 0.00 0.00 0.00 3.36
2678 9185 2.919228 AGACGTTCTGCTTGTTTTCCT 58.081 42.857 0.00 0.00 0.00 3.36
2679 9186 3.808174 AGTAGACGTTCTGCTTGTTTTCC 59.192 43.478 0.00 0.00 35.93 3.13
2682 9189 4.054780 TCAGTAGACGTTCTGCTTGTTT 57.945 40.909 10.16 0.00 37.34 2.83
2726 9236 9.439500 TGACGTTTTTGTAGCCTAAACTATATT 57.561 29.630 0.00 0.00 31.33 1.28
2727 9237 9.439500 TTGACGTTTTTGTAGCCTAAACTATAT 57.561 29.630 0.00 0.00 31.33 0.86
2728 9238 8.830201 TTGACGTTTTTGTAGCCTAAACTATA 57.170 30.769 0.00 0.00 31.33 1.31
2729 9239 7.733402 TTGACGTTTTTGTAGCCTAAACTAT 57.267 32.000 0.00 0.00 31.33 2.12
2730 9240 7.733402 ATTGACGTTTTTGTAGCCTAAACTA 57.267 32.000 0.00 0.00 31.33 2.24
2731 9241 6.628919 ATTGACGTTTTTGTAGCCTAAACT 57.371 33.333 0.00 0.00 31.33 2.66
2732 9242 8.959734 AATATTGACGTTTTTGTAGCCTAAAC 57.040 30.769 0.00 0.00 0.00 2.01
2733 9243 9.968870 AAAATATTGACGTTTTTGTAGCCTAAA 57.031 25.926 0.00 0.00 0.00 1.85
2734 9244 9.400638 CAAAATATTGACGTTTTTGTAGCCTAA 57.599 29.630 12.21 0.00 38.94 2.69
2735 9245 8.024285 CCAAAATATTGACGTTTTTGTAGCCTA 58.976 33.333 16.86 0.00 38.20 3.93
2736 9246 6.866248 CCAAAATATTGACGTTTTTGTAGCCT 59.134 34.615 16.86 0.00 38.20 4.58
2737 9247 6.643360 ACCAAAATATTGACGTTTTTGTAGCC 59.357 34.615 16.86 0.00 38.20 3.93
2738 9248 7.631915 ACCAAAATATTGACGTTTTTGTAGC 57.368 32.000 16.86 0.00 38.20 3.58
2740 9250 9.627395 CCATACCAAAATATTGACGTTTTTGTA 57.373 29.630 16.86 11.46 38.20 2.41
2741 9251 8.361139 TCCATACCAAAATATTGACGTTTTTGT 58.639 29.630 16.86 10.17 38.20 2.83
2742 9252 8.749841 TCCATACCAAAATATTGACGTTTTTG 57.250 30.769 13.10 13.10 38.94 2.44
2743 9253 8.032451 CCTCCATACCAAAATATTGACGTTTTT 58.968 33.333 0.00 0.00 38.94 1.94
2744 9254 7.177744 ACCTCCATACCAAAATATTGACGTTTT 59.822 33.333 0.00 0.00 38.94 2.43
2745 9255 6.661805 ACCTCCATACCAAAATATTGACGTTT 59.338 34.615 0.00 0.00 38.94 3.60
2746 9256 6.184789 ACCTCCATACCAAAATATTGACGTT 58.815 36.000 0.00 0.00 38.94 3.99
2747 9257 5.751586 ACCTCCATACCAAAATATTGACGT 58.248 37.500 0.00 0.00 38.94 4.34
2748 9258 6.990349 ACTACCTCCATACCAAAATATTGACG 59.010 38.462 0.00 0.00 38.94 4.35
2754 9264 9.166222 ACATGATACTACCTCCATACCAAAATA 57.834 33.333 0.00 0.00 0.00 1.40
2755 9265 8.045720 ACATGATACTACCTCCATACCAAAAT 57.954 34.615 0.00 0.00 0.00 1.82
2756 9266 7.446106 ACATGATACTACCTCCATACCAAAA 57.554 36.000 0.00 0.00 0.00 2.44
2757 9267 8.593679 CATACATGATACTACCTCCATACCAAA 58.406 37.037 0.00 0.00 0.00 3.28
2758 9268 7.310423 GCATACATGATACTACCTCCATACCAA 60.310 40.741 0.00 0.00 0.00 3.67
2759 9269 6.154534 GCATACATGATACTACCTCCATACCA 59.845 42.308 0.00 0.00 0.00 3.25
2760 9270 6.407074 GGCATACATGATACTACCTCCATACC 60.407 46.154 0.00 0.00 0.00 2.73
2761 9271 6.407074 GGGCATACATGATACTACCTCCATAC 60.407 46.154 0.00 0.00 0.00 2.39
2762 9272 5.661312 GGGCATACATGATACTACCTCCATA 59.339 44.000 0.00 0.00 0.00 2.74
2763 9273 4.471386 GGGCATACATGATACTACCTCCAT 59.529 45.833 0.00 0.00 0.00 3.41
2764 9274 3.838317 GGGCATACATGATACTACCTCCA 59.162 47.826 0.00 0.00 0.00 3.86
2765 9275 4.081420 CAGGGCATACATGATACTACCTCC 60.081 50.000 0.00 0.00 31.04 4.30
2766 9276 4.772624 TCAGGGCATACATGATACTACCTC 59.227 45.833 0.00 0.00 34.49 3.85
2767 9277 4.752063 TCAGGGCATACATGATACTACCT 58.248 43.478 0.00 0.00 34.49 3.08
2768 9278 5.483685 TTCAGGGCATACATGATACTACC 57.516 43.478 0.00 0.00 39.96 3.18
2769 9279 6.525629 AGTTTCAGGGCATACATGATACTAC 58.474 40.000 0.00 0.00 45.71 2.73
2770 9280 6.747414 AGTTTCAGGGCATACATGATACTA 57.253 37.500 0.00 0.00 45.71 1.82
2771 9281 5.636903 AGTTTCAGGGCATACATGATACT 57.363 39.130 0.00 0.00 43.83 2.12
2772 9282 9.155975 CTTATAGTTTCAGGGCATACATGATAC 57.844 37.037 0.00 0.00 39.96 2.24
2773 9283 9.100197 TCTTATAGTTTCAGGGCATACATGATA 57.900 33.333 0.00 0.00 39.96 2.15
2774 9284 7.977818 TCTTATAGTTTCAGGGCATACATGAT 58.022 34.615 0.00 0.00 39.96 2.45
2775 9285 7.373617 TCTTATAGTTTCAGGGCATACATGA 57.626 36.000 0.00 0.00 38.26 3.07
2776 9286 7.879677 TGATCTTATAGTTTCAGGGCATACATG 59.120 37.037 0.00 0.00 0.00 3.21
2777 9287 7.977818 TGATCTTATAGTTTCAGGGCATACAT 58.022 34.615 0.00 0.00 0.00 2.29
2778 9288 7.373617 TGATCTTATAGTTTCAGGGCATACA 57.626 36.000 0.00 0.00 0.00 2.29
2779 9289 7.934120 ACTTGATCTTATAGTTTCAGGGCATAC 59.066 37.037 0.00 0.00 0.00 2.39
2780 9290 7.933577 CACTTGATCTTATAGTTTCAGGGCATA 59.066 37.037 0.00 0.00 0.00 3.14
2781 9291 6.769822 CACTTGATCTTATAGTTTCAGGGCAT 59.230 38.462 0.00 0.00 0.00 4.40
2782 9292 6.115446 CACTTGATCTTATAGTTTCAGGGCA 58.885 40.000 0.00 0.00 0.00 5.36
2783 9293 6.116126 ACACTTGATCTTATAGTTTCAGGGC 58.884 40.000 0.00 0.00 0.00 5.19
2822 9332 6.994496 CCTTGAGATGATAGTATTTGCCTTGA 59.006 38.462 0.00 0.00 0.00 3.02
2823 9333 6.293845 GCCTTGAGATGATAGTATTTGCCTTG 60.294 42.308 0.00 0.00 0.00 3.61
2824 9334 5.767168 GCCTTGAGATGATAGTATTTGCCTT 59.233 40.000 0.00 0.00 0.00 4.35
2825 9335 5.163163 TGCCTTGAGATGATAGTATTTGCCT 60.163 40.000 0.00 0.00 0.00 4.75
2826 9336 5.065914 TGCCTTGAGATGATAGTATTTGCC 58.934 41.667 0.00 0.00 0.00 4.52
2827 9337 6.624352 TTGCCTTGAGATGATAGTATTTGC 57.376 37.500 0.00 0.00 0.00 3.68
2829 9339 9.851686 TGTATTTGCCTTGAGATGATAGTATTT 57.148 29.630 0.00 0.00 0.00 1.40
2830 9340 9.277783 GTGTATTTGCCTTGAGATGATAGTATT 57.722 33.333 0.00 0.00 0.00 1.89
2831 9341 8.654997 AGTGTATTTGCCTTGAGATGATAGTAT 58.345 33.333 0.00 0.00 0.00 2.12
2832 9342 8.023021 AGTGTATTTGCCTTGAGATGATAGTA 57.977 34.615 0.00 0.00 0.00 1.82
2833 9343 6.893583 AGTGTATTTGCCTTGAGATGATAGT 58.106 36.000 0.00 0.00 0.00 2.12
2834 9344 8.893219 TTAGTGTATTTGCCTTGAGATGATAG 57.107 34.615 0.00 0.00 0.00 2.08
2835 9345 7.933577 CCTTAGTGTATTTGCCTTGAGATGATA 59.066 37.037 0.00 0.00 0.00 2.15
2836 9346 6.769822 CCTTAGTGTATTTGCCTTGAGATGAT 59.230 38.462 0.00 0.00 0.00 2.45
2837 9347 6.070251 TCCTTAGTGTATTTGCCTTGAGATGA 60.070 38.462 0.00 0.00 0.00 2.92
2838 9348 6.037610 GTCCTTAGTGTATTTGCCTTGAGATG 59.962 42.308 0.00 0.00 0.00 2.90
2839 9349 6.116126 GTCCTTAGTGTATTTGCCTTGAGAT 58.884 40.000 0.00 0.00 0.00 2.75
2840 9350 5.012664 TGTCCTTAGTGTATTTGCCTTGAGA 59.987 40.000 0.00 0.00 0.00 3.27
2841 9351 5.245531 TGTCCTTAGTGTATTTGCCTTGAG 58.754 41.667 0.00 0.00 0.00 3.02
2842 9352 5.235850 TGTCCTTAGTGTATTTGCCTTGA 57.764 39.130 0.00 0.00 0.00 3.02
2843 9353 5.957842 TTGTCCTTAGTGTATTTGCCTTG 57.042 39.130 0.00 0.00 0.00 3.61
2844 9354 6.245408 TGATTGTCCTTAGTGTATTTGCCTT 58.755 36.000 0.00 0.00 0.00 4.35
2845 9355 5.815581 TGATTGTCCTTAGTGTATTTGCCT 58.184 37.500 0.00 0.00 0.00 4.75
2846 9356 5.449177 GCTGATTGTCCTTAGTGTATTTGCC 60.449 44.000 0.00 0.00 0.00 4.52
2847 9357 5.123820 TGCTGATTGTCCTTAGTGTATTTGC 59.876 40.000 0.00 0.00 0.00 3.68
2848 9358 6.149308 TGTGCTGATTGTCCTTAGTGTATTTG 59.851 38.462 0.00 0.00 0.00 2.32
2849 9359 6.237901 TGTGCTGATTGTCCTTAGTGTATTT 58.762 36.000 0.00 0.00 0.00 1.40
2850 9360 5.804639 TGTGCTGATTGTCCTTAGTGTATT 58.195 37.500 0.00 0.00 0.00 1.89
2851 9361 5.420725 TGTGCTGATTGTCCTTAGTGTAT 57.579 39.130 0.00 0.00 0.00 2.29
2852 9362 4.882842 TGTGCTGATTGTCCTTAGTGTA 57.117 40.909 0.00 0.00 0.00 2.90
2853 9363 3.769739 TGTGCTGATTGTCCTTAGTGT 57.230 42.857 0.00 0.00 0.00 3.55
2854 9364 3.814842 TGTTGTGCTGATTGTCCTTAGTG 59.185 43.478 0.00 0.00 0.00 2.74
2855 9365 3.815401 GTGTTGTGCTGATTGTCCTTAGT 59.185 43.478 0.00 0.00 0.00 2.24
2856 9366 3.189287 GGTGTTGTGCTGATTGTCCTTAG 59.811 47.826 0.00 0.00 0.00 2.18
2857 9367 3.146066 GGTGTTGTGCTGATTGTCCTTA 58.854 45.455 0.00 0.00 0.00 2.69
2858 9368 1.956477 GGTGTTGTGCTGATTGTCCTT 59.044 47.619 0.00 0.00 0.00 3.36
2859 9369 1.143684 AGGTGTTGTGCTGATTGTCCT 59.856 47.619 0.00 0.00 0.00 3.85
2860 9370 1.609208 AGGTGTTGTGCTGATTGTCC 58.391 50.000 0.00 0.00 0.00 4.02
2861 9371 3.187227 CAGTAGGTGTTGTGCTGATTGTC 59.813 47.826 0.00 0.00 0.00 3.18
2862 9372 3.141398 CAGTAGGTGTTGTGCTGATTGT 58.859 45.455 0.00 0.00 0.00 2.71
2863 9373 3.402110 TCAGTAGGTGTTGTGCTGATTG 58.598 45.455 0.00 0.00 32.09 2.67
2864 9374 3.769739 TCAGTAGGTGTTGTGCTGATT 57.230 42.857 0.00 0.00 32.09 2.57
2865 9375 3.769739 TTCAGTAGGTGTTGTGCTGAT 57.230 42.857 0.00 0.00 36.29 2.90
2866 9376 3.133901 TCTTTCAGTAGGTGTTGTGCTGA 59.866 43.478 0.00 0.00 34.80 4.26
2867 9377 3.466836 TCTTTCAGTAGGTGTTGTGCTG 58.533 45.455 0.00 0.00 0.00 4.41
2868 9378 3.388024 TCTCTTTCAGTAGGTGTTGTGCT 59.612 43.478 0.00 0.00 0.00 4.40
2869 9379 3.495001 GTCTCTTTCAGTAGGTGTTGTGC 59.505 47.826 0.00 0.00 0.00 4.57
2870 9380 4.693283 TGTCTCTTTCAGTAGGTGTTGTG 58.307 43.478 0.00 0.00 0.00 3.33
2871 9381 4.406003 ACTGTCTCTTTCAGTAGGTGTTGT 59.594 41.667 0.00 0.00 43.17 3.32
2872 9382 4.950050 ACTGTCTCTTTCAGTAGGTGTTG 58.050 43.478 0.00 0.00 43.17 3.33
2873 9383 5.128827 TGAACTGTCTCTTTCAGTAGGTGTT 59.871 40.000 0.00 0.00 44.03 3.32
2874 9384 4.649674 TGAACTGTCTCTTTCAGTAGGTGT 59.350 41.667 0.00 0.00 44.03 4.16
2875 9385 4.985409 GTGAACTGTCTCTTTCAGTAGGTG 59.015 45.833 0.00 0.00 44.03 4.00
2876 9386 4.649674 TGTGAACTGTCTCTTTCAGTAGGT 59.350 41.667 0.00 0.00 44.03 3.08
2877 9387 5.201713 TGTGAACTGTCTCTTTCAGTAGG 57.798 43.478 0.00 0.00 44.03 3.18
2878 9388 4.683781 GCTGTGAACTGTCTCTTTCAGTAG 59.316 45.833 0.00 0.00 44.03 2.57
2879 9389 4.099419 TGCTGTGAACTGTCTCTTTCAGTA 59.901 41.667 0.00 0.00 44.03 2.74
2880 9390 3.118629 TGCTGTGAACTGTCTCTTTCAGT 60.119 43.478 0.00 0.00 46.30 3.41
2881 9391 3.461061 TGCTGTGAACTGTCTCTTTCAG 58.539 45.455 0.00 0.00 38.68 3.02
2882 9392 3.541996 TGCTGTGAACTGTCTCTTTCA 57.458 42.857 0.00 0.00 0.00 2.69
2883 9393 4.882671 TTTGCTGTGAACTGTCTCTTTC 57.117 40.909 0.00 0.00 0.00 2.62
2884 9394 5.415701 TCTTTTTGCTGTGAACTGTCTCTTT 59.584 36.000 0.00 0.00 0.00 2.52
2885 9395 4.943705 TCTTTTTGCTGTGAACTGTCTCTT 59.056 37.500 0.00 0.00 0.00 2.85
2886 9396 4.517285 TCTTTTTGCTGTGAACTGTCTCT 58.483 39.130 0.00 0.00 0.00 3.10
2887 9397 4.882671 TCTTTTTGCTGTGAACTGTCTC 57.117 40.909 0.00 0.00 0.00 3.36
2888 9398 5.841957 ATTCTTTTTGCTGTGAACTGTCT 57.158 34.783 0.00 0.00 0.00 3.41
2889 9399 6.088616 GCATATTCTTTTTGCTGTGAACTGTC 59.911 38.462 0.00 0.00 33.61 3.51
2890 9400 5.922544 GCATATTCTTTTTGCTGTGAACTGT 59.077 36.000 0.00 0.00 33.61 3.55
2891 9401 5.346822 GGCATATTCTTTTTGCTGTGAACTG 59.653 40.000 0.00 0.00 36.62 3.16
2892 9402 5.473039 GGCATATTCTTTTTGCTGTGAACT 58.527 37.500 0.00 0.00 36.62 3.01
2893 9403 4.627035 GGGCATATTCTTTTTGCTGTGAAC 59.373 41.667 0.00 0.00 36.62 3.18
2894 9404 4.322650 GGGGCATATTCTTTTTGCTGTGAA 60.323 41.667 0.00 0.00 36.62 3.18
2916 9426 4.396166 CACCTGCTGGTCTAATAGTTTTGG 59.604 45.833 13.09 0.00 46.60 3.28
2924 9434 6.554982 TCATATTCTACACCTGCTGGTCTAAT 59.445 38.462 13.09 11.71 46.60 1.73
2926 9436 5.454966 TCATATTCTACACCTGCTGGTCTA 58.545 41.667 13.09 4.90 46.60 2.59
2928 9438 4.672587 TCATATTCTACACCTGCTGGTC 57.327 45.455 13.09 0.00 46.60 4.02
2933 9443 9.149225 CTTGAGATAATCATATTCTACACCTGC 57.851 37.037 0.00 0.00 37.89 4.85
2987 9497 2.642139 TAAGCAATTGCAAGCAGCTC 57.358 45.000 30.89 0.00 45.94 4.09
2988 9498 4.082081 TGTTATAAGCAATTGCAAGCAGCT 60.082 37.500 30.89 14.94 45.94 4.24
3075 10998 8.047310 AGTTGACGATCTTTATTATTCCTGGTT 58.953 33.333 0.00 0.00 0.00 3.67
3090 11013 4.783055 TCTAGGCTCTTAGTTGACGATCT 58.217 43.478 0.00 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.