Multiple sequence alignment - TraesCS2A01G050100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G050100 chr2A 100.000 2674 0 0 1 2674 19362461 19359788 0.000000e+00 4939.0
1 TraesCS2A01G050100 chr2A 91.833 1151 78 13 888 2035 19369808 19368671 0.000000e+00 1591.0
2 TraesCS2A01G050100 chr2A 85.674 1061 97 30 680 1713 19347359 19346327 0.000000e+00 1066.0
3 TraesCS2A01G050100 chr2A 92.396 697 34 9 1 681 19347948 19347255 0.000000e+00 976.0
4 TraesCS2A01G050100 chr2A 83.452 562 54 25 822 1370 19375458 19374923 1.110000e-133 486.0
5 TraesCS2A01G050100 chr2A 96.907 97 1 2 586 681 19361782 19361687 7.660000e-36 161.0
6 TraesCS2A01G050100 chr2A 96.907 97 1 2 680 775 19361876 19361781 7.660000e-36 161.0
7 TraesCS2A01G050100 chr2D 91.195 1238 64 26 817 2035 18239942 18238731 0.000000e+00 1640.0
8 TraesCS2A01G050100 chr2D 87.175 1154 93 32 680 1821 18235521 18234411 0.000000e+00 1260.0
9 TraesCS2A01G050100 chr2D 95.272 698 16 5 1 681 18236122 18235425 0.000000e+00 1090.0
10 TraesCS2A01G050100 chr2D 85.137 841 81 25 782 1607 18246994 18246183 0.000000e+00 821.0
11 TraesCS2A01G050100 chrUn 89.602 1231 79 22 821 2035 178511310 178512507 0.000000e+00 1519.0
12 TraesCS2A01G050100 chrUn 89.448 1232 79 30 821 2035 178476385 178477582 0.000000e+00 1507.0
13 TraesCS2A01G050100 chrUn 86.109 1231 85 32 821 2035 178494583 178495743 0.000000e+00 1247.0
14 TraesCS2A01G050100 chrUn 85.674 1061 97 30 680 1713 12595578 12594546 0.000000e+00 1066.0
15 TraesCS2A01G050100 chrUn 91.931 694 40 8 1 681 178503347 178504037 0.000000e+00 957.0
16 TraesCS2A01G050100 chrUn 91.787 694 41 8 1 681 178520404 178521094 0.000000e+00 952.0
17 TraesCS2A01G050100 chrUn 91.655 695 40 10 1 681 178464648 178465338 0.000000e+00 946.0
18 TraesCS2A01G050100 chrUn 85.849 106 4 7 586 681 12595578 12595474 4.710000e-18 102.0
19 TraesCS2A01G050100 chr2B 89.602 1231 79 24 821 2035 30173808 30172611 0.000000e+00 1519.0
20 TraesCS2A01G050100 chr2B 89.504 1229 84 22 821 2035 30230077 30228880 0.000000e+00 1513.0
21 TraesCS2A01G050100 chr2B 89.277 1231 83 24 821 2035 30187527 30186330 0.000000e+00 1496.0
22 TraesCS2A01G050100 chr2B 88.771 1229 90 24 821 2035 30209038 30207844 0.000000e+00 1461.0
23 TraesCS2A01G050100 chr2B 88.055 879 75 21 782 1647 30236711 30235850 0.000000e+00 1014.0
24 TraesCS2A01G050100 chr2B 92.219 694 38 8 1 681 30220984 30220294 0.000000e+00 968.0
25 TraesCS2A01G050100 chr2B 92.075 694 37 9 1 681 30165039 30164351 0.000000e+00 961.0
26 TraesCS2A01G050100 chr2B 91.787 694 39 9 1 681 30178434 30177746 0.000000e+00 950.0
27 TraesCS2A01G050100 chr2B 91.354 694 44 9 1 681 30200005 30199315 0.000000e+00 935.0
28 TraesCS2A01G050100 chr6B 94.196 224 13 0 2451 2674 660486865 660486642 2.550000e-90 342.0
29 TraesCS2A01G050100 chr6B 88.889 261 29 0 2034 2294 81010512 81010772 3.320000e-84 322.0
30 TraesCS2A01G050100 chr6B 92.793 111 8 0 2297 2407 660486975 660486865 7.660000e-36 161.0
31 TraesCS2A01G050100 chr6B 90.196 51 5 0 737 787 561042192 561042142 1.720000e-07 67.6
32 TraesCS2A01G050100 chr6B 96.875 32 1 0 643 674 561042192 561042161 1.000000e-03 54.7
33 TraesCS2A01G050100 chr1D 88.727 275 25 5 2023 2294 100461832 100462103 5.520000e-87 331.0
34 TraesCS2A01G050100 chr1D 87.778 270 32 1 2030 2298 348665158 348664889 5.560000e-82 315.0
35 TraesCS2A01G050100 chr1D 93.836 146 8 1 2474 2618 75839199 75839054 4.480000e-53 219.0
36 TraesCS2A01G050100 chr1D 82.143 140 17 7 681 817 8956882 8957016 2.180000e-21 113.0
37 TraesCS2A01G050100 chr1D 81.579 114 14 6 571 681 8956866 8956975 1.320000e-13 87.9
38 TraesCS2A01G050100 chr1D 78.761 113 18 4 572 681 441286379 441286270 1.330000e-08 71.3
39 TraesCS2A01G050100 chr5D 88.593 263 30 0 2033 2295 421314826 421314564 1.190000e-83 320.0
40 TraesCS2A01G050100 chr4A 88.593 263 29 1 2033 2295 286747583 286747844 4.300000e-83 318.0
41 TraesCS2A01G050100 chr5A 88.593 263 26 3 2034 2294 535518502 535518762 1.550000e-82 316.0
42 TraesCS2A01G050100 chr5A 89.865 148 14 1 2468 2614 149208003 149208150 3.510000e-44 189.0
43 TraesCS2A01G050100 chr5A 88.288 111 9 2 2531 2637 666922693 666922803 2.160000e-26 130.0
44 TraesCS2A01G050100 chr3D 88.302 265 29 2 2034 2297 151444898 151445161 1.550000e-82 316.0
45 TraesCS2A01G050100 chr1B 87.687 268 30 3 2028 2295 518263759 518264023 2.590000e-80 309.0
46 TraesCS2A01G050100 chr1B 87.640 267 32 1 2033 2298 562894166 562893900 2.590000e-80 309.0
47 TraesCS2A01G050100 chr1B 86.585 82 10 1 735 816 94513342 94513422 3.670000e-14 89.8
48 TraesCS2A01G050100 chr1B 78.302 106 21 2 572 676 94513273 94513377 1.720000e-07 67.6
49 TraesCS2A01G050100 chr6D 90.541 148 13 1 2468 2614 199673238 199673385 7.550000e-46 195.0
50 TraesCS2A01G050100 chr6D 87.234 94 11 1 725 818 638157 638065 3.640000e-19 106.0
51 TraesCS2A01G050100 chr6D 81.395 129 17 5 557 681 638232 638107 6.090000e-17 99.0
52 TraesCS2A01G050100 chr7A 88.514 148 16 1 2468 2614 692685082 692685229 7.610000e-41 178.0
53 TraesCS2A01G050100 chr6A 91.071 56 4 1 730 784 600886148 600886093 1.030000e-09 75.0
54 TraesCS2A01G050100 chr6A 93.478 46 3 0 636 681 600886148 600886103 4.780000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G050100 chr2A 19359788 19362461 2673 True 1753.666667 4939 97.9380 1 2674 3 chr2A.!!$R4 2673
1 TraesCS2A01G050100 chr2A 19368671 19369808 1137 True 1591.000000 1591 91.8330 888 2035 1 chr2A.!!$R1 1147
2 TraesCS2A01G050100 chr2A 19346327 19347948 1621 True 1021.000000 1066 89.0350 1 1713 2 chr2A.!!$R3 1712
3 TraesCS2A01G050100 chr2A 19374923 19375458 535 True 486.000000 486 83.4520 822 1370 1 chr2A.!!$R2 548
4 TraesCS2A01G050100 chr2D 18234411 18239942 5531 True 1330.000000 1640 91.2140 1 2035 3 chr2D.!!$R2 2034
5 TraesCS2A01G050100 chr2D 18246183 18246994 811 True 821.000000 821 85.1370 782 1607 1 chr2D.!!$R1 825
6 TraesCS2A01G050100 chrUn 178511310 178512507 1197 False 1519.000000 1519 89.6020 821 2035 1 chrUn.!!$F5 1214
7 TraesCS2A01G050100 chrUn 178476385 178477582 1197 False 1507.000000 1507 89.4480 821 2035 1 chrUn.!!$F2 1214
8 TraesCS2A01G050100 chrUn 178494583 178495743 1160 False 1247.000000 1247 86.1090 821 2035 1 chrUn.!!$F3 1214
9 TraesCS2A01G050100 chrUn 178503347 178504037 690 False 957.000000 957 91.9310 1 681 1 chrUn.!!$F4 680
10 TraesCS2A01G050100 chrUn 178520404 178521094 690 False 952.000000 952 91.7870 1 681 1 chrUn.!!$F6 680
11 TraesCS2A01G050100 chrUn 178464648 178465338 690 False 946.000000 946 91.6550 1 681 1 chrUn.!!$F1 680
12 TraesCS2A01G050100 chrUn 12594546 12595578 1032 True 584.000000 1066 85.7615 586 1713 2 chrUn.!!$R1 1127
13 TraesCS2A01G050100 chr2B 30228880 30230077 1197 True 1513.000000 1513 89.5040 821 2035 1 chr2B.!!$R6 1214
14 TraesCS2A01G050100 chr2B 30186330 30187527 1197 True 1496.000000 1496 89.2770 821 2035 1 chr2B.!!$R2 1214
15 TraesCS2A01G050100 chr2B 30207844 30209038 1194 True 1461.000000 1461 88.7710 821 2035 1 chr2B.!!$R4 1214
16 TraesCS2A01G050100 chr2B 30172611 30178434 5823 True 1234.500000 1519 90.6945 1 2035 2 chr2B.!!$R8 2034
17 TraesCS2A01G050100 chr2B 30235850 30236711 861 True 1014.000000 1014 88.0550 782 1647 1 chr2B.!!$R7 865
18 TraesCS2A01G050100 chr2B 30220294 30220984 690 True 968.000000 968 92.2190 1 681 1 chr2B.!!$R5 680
19 TraesCS2A01G050100 chr2B 30164351 30165039 688 True 961.000000 961 92.0750 1 681 1 chr2B.!!$R1 680
20 TraesCS2A01G050100 chr2B 30199315 30200005 690 True 935.000000 935 91.3540 1 681 1 chr2B.!!$R3 680

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
253 4076 1.519455 GATGCGGACGCTAGTGCTT 60.519 57.895 18.04 0.0 42.51 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2128 9912 0.937304 CGTATCGATTTGCCACTGGG 59.063 55.0 1.71 0.0 37.18 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
253 4076 1.519455 GATGCGGACGCTAGTGCTT 60.519 57.895 18.04 0.00 42.51 3.91
347 4170 4.528596 TCTCGGAGAAAGAGAGGAAAATGT 59.471 41.667 4.96 0.00 39.57 2.71
381 4204 6.715264 AGACAACGGAGGTTTTTGAAGATAAT 59.285 34.615 0.00 0.00 32.98 1.28
406 4229 2.601367 GCACATGGCTGGTTGGGT 60.601 61.111 0.00 0.00 40.25 4.51
675 4509 9.981114 TGCAAGATCAAAAGAATATAGTATCGA 57.019 29.630 0.00 0.00 0.00 3.59
855 8592 9.814899 TCAATTTTGTTCAATGTGATTGTAACT 57.185 25.926 0.00 0.00 41.02 2.24
875 8612 9.669353 TGTAACTACTAGTAAAAGAGTTTCACG 57.331 33.333 12.07 0.00 32.75 4.35
922 8659 6.635166 AACGTTTGAAACCATAAACACAAC 57.365 33.333 2.00 0.00 36.77 3.32
923 8660 5.103687 ACGTTTGAAACCATAAACACAACC 58.896 37.500 2.00 0.00 36.77 3.77
924 8661 5.103000 CGTTTGAAACCATAAACACAACCA 58.897 37.500 2.00 0.00 36.77 3.67
925 8662 5.577164 CGTTTGAAACCATAAACACAACCAA 59.423 36.000 2.00 0.00 36.77 3.67
963 8717 9.132923 CACCATCTAATTACTCCTAGTCTTACA 57.867 37.037 0.00 0.00 0.00 2.41
983 8742 8.743714 TCTTACAGTATATATAGGTCGAGTCGA 58.256 37.037 12.09 12.09 0.00 4.20
984 8743 8.923609 TTACAGTATATATAGGTCGAGTCGAG 57.076 38.462 17.12 1.61 36.23 4.04
985 8744 7.167924 ACAGTATATATAGGTCGAGTCGAGA 57.832 40.000 17.12 4.75 36.23 4.04
986 8745 7.035004 ACAGTATATATAGGTCGAGTCGAGAC 58.965 42.308 17.12 12.19 36.23 3.36
987 8746 7.093814 ACAGTATATATAGGTCGAGTCGAGACT 60.094 40.741 17.12 18.75 45.84 3.24
1041 8800 1.360852 TCCTCTCCAAGCTCTCTCCTT 59.639 52.381 0.00 0.00 0.00 3.36
1043 8802 2.455557 CTCTCCAAGCTCTCTCCTTCA 58.544 52.381 0.00 0.00 0.00 3.02
1049 8808 2.086610 AGCTCTCTCCTTCATCCTCC 57.913 55.000 0.00 0.00 0.00 4.30
1111 8870 3.224324 ACGCTGGAGGACACGTGT 61.224 61.111 23.64 23.64 36.17 4.49
1475 9246 3.345808 GCTGCGACAAGGCGTTCA 61.346 61.111 0.00 0.00 35.06 3.18
1481 9252 1.428448 CGACAAGGCGTTCATCTTCA 58.572 50.000 0.00 0.00 0.00 3.02
1723 9501 2.415512 GGAGATTGTAGAACGTTGTGGC 59.584 50.000 5.00 0.00 0.00 5.01
1725 9503 2.038557 AGATTGTAGAACGTTGTGGCCT 59.961 45.455 5.00 0.00 0.00 5.19
1726 9504 2.335316 TTGTAGAACGTTGTGGCCTT 57.665 45.000 5.00 0.00 0.00 4.35
1727 9505 2.335316 TGTAGAACGTTGTGGCCTTT 57.665 45.000 5.00 0.00 0.00 3.11
1802 9580 4.259356 CAAGAGTTCATTCAGATCAGGCA 58.741 43.478 0.00 0.00 0.00 4.75
1808 9586 4.515028 TCATTCAGATCAGGCAAGGAAT 57.485 40.909 0.00 0.00 0.00 3.01
1843 9621 7.803189 TCGATTTTCACTGACAATTAGCTTTTC 59.197 33.333 0.00 0.00 0.00 2.29
1844 9622 7.805071 CGATTTTCACTGACAATTAGCTTTTCT 59.195 33.333 0.00 0.00 0.00 2.52
1999 9783 1.809619 CCCACCTACGACACATGCG 60.810 63.158 0.00 0.00 0.00 4.73
2043 9827 8.488651 ACTGTAATTTAATGTTACTTCCTCCG 57.511 34.615 10.70 0.00 34.08 4.63
2044 9828 7.551617 ACTGTAATTTAATGTTACTTCCTCCGG 59.448 37.037 0.00 0.00 34.08 5.14
2045 9829 7.396418 TGTAATTTAATGTTACTTCCTCCGGT 58.604 34.615 0.00 0.00 34.08 5.28
2046 9830 6.997239 AATTTAATGTTACTTCCTCCGGTC 57.003 37.500 0.00 0.00 0.00 4.79
2047 9831 4.476628 TTAATGTTACTTCCTCCGGTCC 57.523 45.455 0.00 0.00 0.00 4.46
2048 9832 2.249309 ATGTTACTTCCTCCGGTCCT 57.751 50.000 0.00 0.00 0.00 3.85
2049 9833 2.019807 TGTTACTTCCTCCGGTCCTT 57.980 50.000 0.00 0.00 0.00 3.36
2050 9834 2.332117 TGTTACTTCCTCCGGTCCTTT 58.668 47.619 0.00 0.00 0.00 3.11
2051 9835 2.707257 TGTTACTTCCTCCGGTCCTTTT 59.293 45.455 0.00 0.00 0.00 2.27
2052 9836 3.136992 TGTTACTTCCTCCGGTCCTTTTT 59.863 43.478 0.00 0.00 0.00 1.94
2053 9837 4.347583 TGTTACTTCCTCCGGTCCTTTTTA 59.652 41.667 0.00 0.00 0.00 1.52
2054 9838 3.697619 ACTTCCTCCGGTCCTTTTTAG 57.302 47.619 0.00 0.00 0.00 1.85
2055 9839 2.977580 ACTTCCTCCGGTCCTTTTTAGT 59.022 45.455 0.00 0.00 0.00 2.24
2056 9840 3.007723 ACTTCCTCCGGTCCTTTTTAGTC 59.992 47.826 0.00 0.00 0.00 2.59
2057 9841 2.898662 TCCTCCGGTCCTTTTTAGTCT 58.101 47.619 0.00 0.00 0.00 3.24
2058 9842 2.565834 TCCTCCGGTCCTTTTTAGTCTG 59.434 50.000 0.00 0.00 0.00 3.51
2059 9843 2.347731 CTCCGGTCCTTTTTAGTCTGC 58.652 52.381 0.00 0.00 0.00 4.26
2060 9844 1.695242 TCCGGTCCTTTTTAGTCTGCA 59.305 47.619 0.00 0.00 0.00 4.41
2061 9845 2.304761 TCCGGTCCTTTTTAGTCTGCAT 59.695 45.455 0.00 0.00 0.00 3.96
2062 9846 3.516300 TCCGGTCCTTTTTAGTCTGCATA 59.484 43.478 0.00 0.00 0.00 3.14
2063 9847 4.163458 TCCGGTCCTTTTTAGTCTGCATAT 59.837 41.667 0.00 0.00 0.00 1.78
2064 9848 5.364446 TCCGGTCCTTTTTAGTCTGCATATA 59.636 40.000 0.00 0.00 0.00 0.86
2065 9849 6.053005 CCGGTCCTTTTTAGTCTGCATATAA 58.947 40.000 0.00 0.00 0.00 0.98
2066 9850 6.202954 CCGGTCCTTTTTAGTCTGCATATAAG 59.797 42.308 0.00 0.00 0.00 1.73
2067 9851 6.761714 CGGTCCTTTTTAGTCTGCATATAAGT 59.238 38.462 0.00 0.00 0.00 2.24
2068 9852 7.280205 CGGTCCTTTTTAGTCTGCATATAAGTT 59.720 37.037 0.00 0.00 0.00 2.66
2069 9853 8.957466 GGTCCTTTTTAGTCTGCATATAAGTTT 58.043 33.333 0.00 0.00 0.00 2.66
2075 9859 7.534085 TTAGTCTGCATATAAGTTTTGTCCG 57.466 36.000 0.00 0.00 0.00 4.79
2076 9860 5.730550 AGTCTGCATATAAGTTTTGTCCGA 58.269 37.500 0.00 0.00 0.00 4.55
2077 9861 6.170506 AGTCTGCATATAAGTTTTGTCCGAA 58.829 36.000 0.00 0.00 0.00 4.30
2078 9862 6.313905 AGTCTGCATATAAGTTTTGTCCGAAG 59.686 38.462 0.00 0.00 0.00 3.79
2079 9863 6.092259 GTCTGCATATAAGTTTTGTCCGAAGT 59.908 38.462 0.00 0.00 0.00 3.01
2080 9864 6.312918 TCTGCATATAAGTTTTGTCCGAAGTC 59.687 38.462 0.00 0.00 0.00 3.01
2081 9865 5.935206 TGCATATAAGTTTTGTCCGAAGTCA 59.065 36.000 0.00 0.00 0.00 3.41
2082 9866 6.428465 TGCATATAAGTTTTGTCCGAAGTCAA 59.572 34.615 0.00 0.00 0.00 3.18
2083 9867 7.041030 TGCATATAAGTTTTGTCCGAAGTCAAA 60.041 33.333 0.00 0.00 32.75 2.69
2084 9868 7.806014 GCATATAAGTTTTGTCCGAAGTCAAAA 59.194 33.333 0.00 0.00 39.93 2.44
2085 9869 9.840427 CATATAAGTTTTGTCCGAAGTCAAAAT 57.160 29.630 6.39 0.00 42.62 1.82
2088 9872 6.937436 AGTTTTGTCCGAAGTCAAAATACT 57.063 33.333 6.39 0.00 42.62 2.12
2089 9873 7.329588 AGTTTTGTCCGAAGTCAAAATACTT 57.670 32.000 6.39 0.00 42.62 2.24
2134 9918 4.789012 AAAAGTATCAACATGCCCAGTG 57.211 40.909 0.00 0.00 0.00 3.66
2135 9919 2.425143 AGTATCAACATGCCCAGTGG 57.575 50.000 0.63 0.63 0.00 4.00
2147 9931 0.937304 CCCAGTGGCAAATCGATACG 59.063 55.000 2.61 0.00 0.00 3.06
2148 9932 0.937304 CCAGTGGCAAATCGATACGG 59.063 55.000 0.00 0.00 0.00 4.02
2149 9933 1.651987 CAGTGGCAAATCGATACGGT 58.348 50.000 0.00 0.00 0.00 4.83
2150 9934 2.006888 CAGTGGCAAATCGATACGGTT 58.993 47.619 0.00 0.00 0.00 4.44
2151 9935 3.191669 CAGTGGCAAATCGATACGGTTA 58.808 45.455 0.00 0.00 26.97 2.85
2152 9936 3.245284 CAGTGGCAAATCGATACGGTTAG 59.755 47.826 0.00 0.00 26.97 2.34
2153 9937 3.131577 AGTGGCAAATCGATACGGTTAGA 59.868 43.478 0.00 0.00 26.97 2.10
2154 9938 4.056050 GTGGCAAATCGATACGGTTAGAT 58.944 43.478 0.00 0.00 26.97 1.98
2155 9939 4.510340 GTGGCAAATCGATACGGTTAGATT 59.490 41.667 0.00 0.00 35.12 2.40
2156 9940 4.748102 TGGCAAATCGATACGGTTAGATTC 59.252 41.667 0.00 0.00 32.79 2.52
2157 9941 4.748102 GGCAAATCGATACGGTTAGATTCA 59.252 41.667 0.00 0.00 32.79 2.57
2158 9942 5.408604 GGCAAATCGATACGGTTAGATTCAT 59.591 40.000 0.00 0.00 32.79 2.57
2159 9943 6.073222 GGCAAATCGATACGGTTAGATTCATT 60.073 38.462 0.00 0.00 32.79 2.57
2160 9944 7.117236 GGCAAATCGATACGGTTAGATTCATTA 59.883 37.037 0.00 0.00 32.79 1.90
2161 9945 8.656849 GCAAATCGATACGGTTAGATTCATTAT 58.343 33.333 0.00 0.00 32.79 1.28
2162 9946 9.958285 CAAATCGATACGGTTAGATTCATTATG 57.042 33.333 0.00 0.00 32.79 1.90
2163 9947 9.923143 AAATCGATACGGTTAGATTCATTATGA 57.077 29.630 0.00 0.00 32.79 2.15
2164 9948 9.923143 AATCGATACGGTTAGATTCATTATGAA 57.077 29.630 10.23 10.23 41.09 2.57
2165 9949 9.923143 ATCGATACGGTTAGATTCATTATGAAA 57.077 29.630 11.88 0.00 40.12 2.69
2166 9950 9.923143 TCGATACGGTTAGATTCATTATGAAAT 57.077 29.630 11.88 6.51 40.12 2.17
2167 9951 9.958285 CGATACGGTTAGATTCATTATGAAATG 57.042 33.333 11.88 0.00 40.12 2.32
2171 9955 9.832445 ACGGTTAGATTCATTATGAAATGTAGT 57.168 29.630 11.88 4.36 40.12 2.73
2255 10039 8.460831 AAACATTACAAAGTTTGACTTGACAC 57.539 30.769 22.23 0.00 38.66 3.67
2256 10040 7.151999 ACATTACAAAGTTTGACTTGACACA 57.848 32.000 22.23 0.00 38.66 3.72
2257 10041 7.598278 ACATTACAAAGTTTGACTTGACACAA 58.402 30.769 22.23 2.72 38.66 3.33
2258 10042 8.085296 ACATTACAAAGTTTGACTTGACACAAA 58.915 29.630 22.23 0.00 38.66 2.83
2259 10043 9.086336 CATTACAAAGTTTGACTTGACACAAAT 57.914 29.630 22.23 0.00 38.66 2.32
2260 10044 8.682128 TTACAAAGTTTGACTTGACACAAATC 57.318 30.769 22.23 0.00 38.66 2.17
2261 10045 6.924111 ACAAAGTTTGACTTGACACAAATCT 58.076 32.000 22.23 0.00 38.66 2.40
2262 10046 8.050778 ACAAAGTTTGACTTGACACAAATCTA 57.949 30.769 22.23 0.00 38.66 1.98
2263 10047 8.519526 ACAAAGTTTGACTTGACACAAATCTAA 58.480 29.630 22.23 0.00 38.66 2.10
2264 10048 9.520204 CAAAGTTTGACTTGACACAAATCTAAT 57.480 29.630 10.19 0.00 38.66 1.73
2267 10051 8.495949 AGTTTGACTTGACACAAATCTAATACG 58.504 33.333 0.00 0.00 38.09 3.06
2268 10052 6.403333 TGACTTGACACAAATCTAATACGC 57.597 37.500 0.00 0.00 0.00 4.42
2269 10053 5.061684 TGACTTGACACAAATCTAATACGCG 59.938 40.000 3.53 3.53 0.00 6.01
2270 10054 4.328983 ACTTGACACAAATCTAATACGCGG 59.671 41.667 12.47 0.00 0.00 6.46
2271 10055 4.112716 TGACACAAATCTAATACGCGGA 57.887 40.909 12.47 0.00 0.00 5.54
2272 10056 4.109766 TGACACAAATCTAATACGCGGAG 58.890 43.478 12.47 1.75 0.00 4.63
2273 10057 4.110482 GACACAAATCTAATACGCGGAGT 58.890 43.478 12.47 2.60 0.00 3.85
2274 10058 5.163632 TGACACAAATCTAATACGCGGAGTA 60.164 40.000 12.47 4.11 40.03 2.59
2275 10059 5.653507 ACACAAATCTAATACGCGGAGTAA 58.346 37.500 12.47 0.00 39.04 2.24
2276 10060 6.101332 ACACAAATCTAATACGCGGAGTAAA 58.899 36.000 12.47 0.00 39.04 2.01
2277 10061 6.591062 ACACAAATCTAATACGCGGAGTAAAA 59.409 34.615 12.47 0.00 39.04 1.52
2278 10062 7.118101 ACACAAATCTAATACGCGGAGTAAAAA 59.882 33.333 12.47 0.00 39.04 1.94
2279 10063 7.634817 CACAAATCTAATACGCGGAGTAAAAAG 59.365 37.037 12.47 0.00 39.04 2.27
2280 10064 6.839820 AATCTAATACGCGGAGTAAAAAGG 57.160 37.500 12.47 0.00 39.04 3.11
2281 10065 5.581126 TCTAATACGCGGAGTAAAAAGGA 57.419 39.130 12.47 0.00 39.04 3.36
2282 10066 5.343249 TCTAATACGCGGAGTAAAAAGGAC 58.657 41.667 12.47 0.00 39.04 3.85
2283 10067 2.368655 TACGCGGAGTAAAAAGGACC 57.631 50.000 12.47 0.00 31.26 4.46
2284 10068 0.668401 ACGCGGAGTAAAAAGGACCG 60.668 55.000 12.47 0.00 45.26 4.79
2285 10069 1.356527 CGCGGAGTAAAAAGGACCGG 61.357 60.000 0.00 0.00 43.15 5.28
2286 10070 0.037046 GCGGAGTAAAAAGGACCGGA 60.037 55.000 9.46 0.00 43.15 5.14
2287 10071 2.005560 GCGGAGTAAAAAGGACCGGAG 61.006 57.143 9.46 0.00 43.15 4.63
2301 10085 3.112965 CGGAGGGAGTACCAGGTAG 57.887 63.158 0.00 0.00 43.89 3.18
2302 10086 0.467659 CGGAGGGAGTACCAGGTAGG 60.468 65.000 0.00 0.00 43.89 3.18
2303 10087 0.932211 GGAGGGAGTACCAGGTAGGA 59.068 60.000 0.00 0.00 43.89 2.94
2304 10088 1.290130 GGAGGGAGTACCAGGTAGGAA 59.710 57.143 0.00 0.00 43.89 3.36
2305 10089 2.292719 GGAGGGAGTACCAGGTAGGAAA 60.293 54.545 0.00 0.00 43.89 3.13
2306 10090 3.632906 GGAGGGAGTACCAGGTAGGAAAT 60.633 52.174 0.00 0.00 43.89 2.17
2307 10091 3.385115 AGGGAGTACCAGGTAGGAAATG 58.615 50.000 0.00 0.00 43.89 2.32
2308 10092 2.158798 GGGAGTACCAGGTAGGAAATGC 60.159 54.545 0.00 0.00 41.22 3.56
2309 10093 2.483188 GGAGTACCAGGTAGGAAATGCG 60.483 54.545 0.00 0.00 41.22 4.73
2310 10094 2.429610 GAGTACCAGGTAGGAAATGCGA 59.570 50.000 0.00 0.00 41.22 5.10
2311 10095 2.167900 AGTACCAGGTAGGAAATGCGAC 59.832 50.000 0.00 0.00 41.22 5.19
2312 10096 1.276622 ACCAGGTAGGAAATGCGACT 58.723 50.000 0.00 0.00 41.22 4.18
2313 10097 1.628846 ACCAGGTAGGAAATGCGACTT 59.371 47.619 0.00 0.00 41.22 3.01
2314 10098 2.009774 CCAGGTAGGAAATGCGACTTG 58.990 52.381 0.00 0.00 41.22 3.16
2315 10099 1.398390 CAGGTAGGAAATGCGACTTGC 59.602 52.381 0.00 0.00 46.70 4.01
2316 10100 0.733150 GGTAGGAAATGCGACTTGCC 59.267 55.000 0.00 0.00 45.60 4.52
2317 10101 0.373716 GTAGGAAATGCGACTTGCCG 59.626 55.000 0.00 0.00 45.60 5.69
2326 10110 4.980805 GACTTGCCGCACCCGACA 62.981 66.667 0.00 0.00 36.29 4.35
2327 10111 4.555709 ACTTGCCGCACCCGACAA 62.556 61.111 0.00 0.00 34.44 3.18
2328 10112 4.025401 CTTGCCGCACCCGACAAC 62.025 66.667 0.00 0.00 31.86 3.32
2332 10116 3.487202 CCGCACCCGACAACGATG 61.487 66.667 0.00 0.00 42.66 3.84
2333 10117 4.147322 CGCACCCGACAACGATGC 62.147 66.667 0.00 0.00 42.66 3.91
2334 10118 2.742372 GCACCCGACAACGATGCT 60.742 61.111 0.00 0.00 42.66 3.79
2335 10119 3.027170 GCACCCGACAACGATGCTG 62.027 63.158 0.00 0.00 42.66 4.41
2336 10120 1.667830 CACCCGACAACGATGCTGT 60.668 57.895 0.00 0.00 42.66 4.40
2337 10121 1.374252 ACCCGACAACGATGCTGTC 60.374 57.895 0.00 0.00 42.66 3.51
2347 10131 2.333389 CGATGCTGTCGGGTATAGTC 57.667 55.000 4.47 0.00 46.47 2.59
2348 10132 1.607148 CGATGCTGTCGGGTATAGTCA 59.393 52.381 4.47 0.00 46.47 3.41
2349 10133 2.229062 CGATGCTGTCGGGTATAGTCAT 59.771 50.000 4.47 0.00 46.47 3.06
2350 10134 3.439129 CGATGCTGTCGGGTATAGTCATA 59.561 47.826 4.47 0.00 46.47 2.15
2351 10135 4.096532 CGATGCTGTCGGGTATAGTCATAT 59.903 45.833 4.47 0.00 46.47 1.78
2352 10136 5.583495 GATGCTGTCGGGTATAGTCATATC 58.417 45.833 0.00 0.00 0.00 1.63
2353 10137 3.762288 TGCTGTCGGGTATAGTCATATCC 59.238 47.826 0.00 0.00 34.88 2.59
2354 10138 3.762288 GCTGTCGGGTATAGTCATATCCA 59.238 47.826 0.00 0.00 37.73 3.41
2355 10139 4.219944 GCTGTCGGGTATAGTCATATCCAA 59.780 45.833 0.00 0.00 37.73 3.53
2356 10140 5.105310 GCTGTCGGGTATAGTCATATCCAAT 60.105 44.000 0.00 0.00 37.73 3.16
2357 10141 6.525578 TGTCGGGTATAGTCATATCCAATC 57.474 41.667 0.00 0.00 37.73 2.67
2358 10142 6.253758 TGTCGGGTATAGTCATATCCAATCT 58.746 40.000 0.00 0.00 37.73 2.40
2359 10143 6.152831 TGTCGGGTATAGTCATATCCAATCTG 59.847 42.308 0.00 0.00 37.73 2.90
2360 10144 5.656859 TCGGGTATAGTCATATCCAATCTGG 59.343 44.000 0.00 0.00 37.73 3.86
2361 10145 5.422331 CGGGTATAGTCATATCCAATCTGGT 59.578 44.000 0.00 0.00 37.73 4.00
2362 10146 6.605995 CGGGTATAGTCATATCCAATCTGGTA 59.394 42.308 0.00 0.00 37.73 3.25
2363 10147 7.123697 CGGGTATAGTCATATCCAATCTGGTAA 59.876 40.741 0.00 0.00 37.73 2.85
2364 10148 8.993424 GGGTATAGTCATATCCAATCTGGTAAT 58.007 37.037 0.00 0.00 37.78 1.89
2369 10153 7.390027 AGTCATATCCAATCTGGTAATACAGC 58.610 38.462 0.00 0.00 39.03 4.40
2370 10154 6.595716 GTCATATCCAATCTGGTAATACAGCC 59.404 42.308 0.00 0.00 39.03 4.85
2371 10155 6.272090 TCATATCCAATCTGGTAATACAGCCA 59.728 38.462 0.00 0.00 39.03 4.75
2372 10156 5.589367 ATCCAATCTGGTAATACAGCCAT 57.411 39.130 0.00 0.00 39.03 4.40
2373 10157 5.387113 TCCAATCTGGTAATACAGCCATT 57.613 39.130 0.00 0.00 39.03 3.16
2374 10158 5.132502 TCCAATCTGGTAATACAGCCATTG 58.867 41.667 0.00 0.00 39.03 2.82
2375 10159 5.104151 TCCAATCTGGTAATACAGCCATTGA 60.104 40.000 8.37 0.00 39.03 2.57
2376 10160 5.593909 CCAATCTGGTAATACAGCCATTGAA 59.406 40.000 8.37 0.00 35.97 2.69
2377 10161 6.266103 CCAATCTGGTAATACAGCCATTGAAT 59.734 38.462 8.37 0.00 35.97 2.57
2378 10162 7.365741 CAATCTGGTAATACAGCCATTGAATC 58.634 38.462 0.00 0.00 35.97 2.52
2379 10163 5.056480 TCTGGTAATACAGCCATTGAATCG 58.944 41.667 0.00 0.00 38.36 3.34
2380 10164 4.776349 TGGTAATACAGCCATTGAATCGT 58.224 39.130 0.00 0.00 0.00 3.73
2381 10165 5.919755 TGGTAATACAGCCATTGAATCGTA 58.080 37.500 0.00 0.00 0.00 3.43
2382 10166 6.530120 TGGTAATACAGCCATTGAATCGTAT 58.470 36.000 0.00 0.00 0.00 3.06
2383 10167 7.672240 TGGTAATACAGCCATTGAATCGTATA 58.328 34.615 0.00 0.00 0.00 1.47
2384 10168 8.318412 TGGTAATACAGCCATTGAATCGTATAT 58.682 33.333 0.00 0.00 0.00 0.86
2385 10169 9.811995 GGTAATACAGCCATTGAATCGTATATA 57.188 33.333 0.00 0.00 0.00 0.86
2390 10174 8.484641 ACAGCCATTGAATCGTATATATCAAG 57.515 34.615 0.00 0.00 35.47 3.02
2391 10175 8.097038 ACAGCCATTGAATCGTATATATCAAGT 58.903 33.333 0.00 0.00 35.47 3.16
2392 10176 8.939929 CAGCCATTGAATCGTATATATCAAGTT 58.060 33.333 0.00 0.00 35.47 2.66
2393 10177 9.507329 AGCCATTGAATCGTATATATCAAGTTT 57.493 29.630 0.00 0.00 35.47 2.66
2425 10209 6.991938 ACACATTTTGTACATAGCAATTGGT 58.008 32.000 15.47 15.47 36.32 3.67
2426 10210 7.090173 ACACATTTTGTACATAGCAATTGGTC 58.910 34.615 14.50 0.00 36.32 4.02
2427 10211 6.531240 CACATTTTGTACATAGCAATTGGTCC 59.469 38.462 14.50 0.00 0.00 4.46
2428 10212 6.210385 ACATTTTGTACATAGCAATTGGTCCA 59.790 34.615 14.50 0.00 0.00 4.02
2429 10213 5.895636 TTTGTACATAGCAATTGGTCCAG 57.104 39.130 14.50 7.79 0.00 3.86
2430 10214 3.884895 TGTACATAGCAATTGGTCCAGG 58.115 45.455 14.50 1.72 0.00 4.45
2431 10215 3.521531 TGTACATAGCAATTGGTCCAGGA 59.478 43.478 14.50 0.00 0.00 3.86
2432 10216 3.737559 ACATAGCAATTGGTCCAGGAA 57.262 42.857 14.50 0.00 0.00 3.36
2433 10217 4.046286 ACATAGCAATTGGTCCAGGAAA 57.954 40.909 14.50 0.00 0.00 3.13
2434 10218 4.613437 ACATAGCAATTGGTCCAGGAAAT 58.387 39.130 14.50 0.00 0.00 2.17
2435 10219 5.765510 ACATAGCAATTGGTCCAGGAAATA 58.234 37.500 14.50 0.00 0.00 1.40
2436 10220 6.194235 ACATAGCAATTGGTCCAGGAAATAA 58.806 36.000 14.50 0.00 0.00 1.40
2437 10221 6.096846 ACATAGCAATTGGTCCAGGAAATAAC 59.903 38.462 14.50 0.00 0.00 1.89
2438 10222 4.415596 AGCAATTGGTCCAGGAAATAACA 58.584 39.130 3.82 0.00 0.00 2.41
2439 10223 4.837860 AGCAATTGGTCCAGGAAATAACAA 59.162 37.500 3.82 0.00 0.00 2.83
2440 10224 5.306678 AGCAATTGGTCCAGGAAATAACAAA 59.693 36.000 3.82 0.00 0.00 2.83
2441 10225 5.994668 GCAATTGGTCCAGGAAATAACAAAA 59.005 36.000 7.72 0.00 0.00 2.44
2442 10226 6.147656 GCAATTGGTCCAGGAAATAACAAAAG 59.852 38.462 7.72 0.00 0.00 2.27
2443 10227 5.799827 TTGGTCCAGGAAATAACAAAAGG 57.200 39.130 0.00 0.00 0.00 3.11
2444 10228 3.576550 TGGTCCAGGAAATAACAAAAGGC 59.423 43.478 0.00 0.00 0.00 4.35
2445 10229 3.832490 GGTCCAGGAAATAACAAAAGGCT 59.168 43.478 0.00 0.00 0.00 4.58
2446 10230 4.283467 GGTCCAGGAAATAACAAAAGGCTT 59.717 41.667 0.00 0.00 0.00 4.35
2447 10231 5.470368 GTCCAGGAAATAACAAAAGGCTTC 58.530 41.667 0.00 0.00 0.00 3.86
2448 10232 5.010617 GTCCAGGAAATAACAAAAGGCTTCA 59.989 40.000 0.00 0.00 0.00 3.02
2449 10233 5.243730 TCCAGGAAATAACAAAAGGCTTCAG 59.756 40.000 0.00 0.00 0.00 3.02
2450 10234 5.011023 CCAGGAAATAACAAAAGGCTTCAGT 59.989 40.000 0.00 0.00 0.00 3.41
2451 10235 6.152379 CAGGAAATAACAAAAGGCTTCAGTC 58.848 40.000 0.00 0.00 0.00 3.51
2452 10236 5.243954 AGGAAATAACAAAAGGCTTCAGTCC 59.756 40.000 0.00 0.00 0.00 3.85
2453 10237 5.010617 GGAAATAACAAAAGGCTTCAGTCCA 59.989 40.000 0.00 0.00 0.00 4.02
2454 10238 6.462347 GGAAATAACAAAAGGCTTCAGTCCAA 60.462 38.462 0.00 0.00 0.00 3.53
2455 10239 6.478512 AATAACAAAAGGCTTCAGTCCAAA 57.521 33.333 0.00 0.00 0.00 3.28
2456 10240 4.817318 AACAAAAGGCTTCAGTCCAAAA 57.183 36.364 0.00 0.00 0.00 2.44
2457 10241 4.391405 ACAAAAGGCTTCAGTCCAAAAG 57.609 40.909 0.00 0.00 0.00 2.27
2458 10242 3.126073 CAAAAGGCTTCAGTCCAAAAGC 58.874 45.455 0.00 0.00 45.65 3.51
2462 10246 1.775869 GCTTCAGTCCAAAAGCAAGC 58.224 50.000 2.41 0.00 45.67 4.01
2463 10247 1.603931 GCTTCAGTCCAAAAGCAAGCC 60.604 52.381 2.41 0.00 45.67 4.35
2464 10248 1.682854 CTTCAGTCCAAAAGCAAGCCA 59.317 47.619 0.00 0.00 0.00 4.75
2465 10249 1.999648 TCAGTCCAAAAGCAAGCCAT 58.000 45.000 0.00 0.00 0.00 4.40
2466 10250 3.153369 TCAGTCCAAAAGCAAGCCATA 57.847 42.857 0.00 0.00 0.00 2.74
2467 10251 3.700538 TCAGTCCAAAAGCAAGCCATAT 58.299 40.909 0.00 0.00 0.00 1.78
2468 10252 4.088634 TCAGTCCAAAAGCAAGCCATATT 58.911 39.130 0.00 0.00 0.00 1.28
2469 10253 4.082081 TCAGTCCAAAAGCAAGCCATATTG 60.082 41.667 0.00 0.00 0.00 1.90
2470 10254 4.082081 CAGTCCAAAAGCAAGCCATATTGA 60.082 41.667 0.00 0.00 31.55 2.57
2471 10255 4.713321 AGTCCAAAAGCAAGCCATATTGAT 59.287 37.500 0.00 0.00 31.55 2.57
2472 10256 4.807304 GTCCAAAAGCAAGCCATATTGATG 59.193 41.667 0.00 0.00 31.55 3.07
2482 10266 3.313012 CCATATTGATGGCAGCATTGG 57.687 47.619 6.15 10.70 46.30 3.16
2483 10267 2.631062 CCATATTGATGGCAGCATTGGT 59.369 45.455 6.15 0.00 46.30 3.67
2484 10268 3.827876 CCATATTGATGGCAGCATTGGTA 59.172 43.478 6.15 0.00 46.30 3.25
2485 10269 4.281435 CCATATTGATGGCAGCATTGGTAA 59.719 41.667 6.15 0.00 46.30 2.85
2486 10270 5.466819 CATATTGATGGCAGCATTGGTAAG 58.533 41.667 6.15 0.00 0.00 2.34
2487 10271 1.105457 TGATGGCAGCATTGGTAAGC 58.895 50.000 0.00 0.00 0.00 3.09
2488 10272 1.341285 TGATGGCAGCATTGGTAAGCT 60.341 47.619 0.00 0.00 42.94 3.74
2489 10273 1.336125 GATGGCAGCATTGGTAAGCTC 59.664 52.381 0.00 0.00 39.50 4.09
2490 10274 0.038021 TGGCAGCATTGGTAAGCTCA 59.962 50.000 0.00 0.00 39.50 4.26
2491 10275 1.176527 GGCAGCATTGGTAAGCTCAA 58.823 50.000 0.00 0.00 39.50 3.02
2492 10276 1.753073 GGCAGCATTGGTAAGCTCAAT 59.247 47.619 0.00 0.00 39.50 2.57
2493 10277 2.223665 GGCAGCATTGGTAAGCTCAATC 60.224 50.000 0.00 0.00 39.50 2.67
2494 10278 2.424601 GCAGCATTGGTAAGCTCAATCA 59.575 45.455 0.00 0.00 39.50 2.57
2495 10279 3.488721 GCAGCATTGGTAAGCTCAATCAG 60.489 47.826 0.00 0.00 39.50 2.90
2496 10280 3.943381 CAGCATTGGTAAGCTCAATCAGA 59.057 43.478 0.00 0.00 39.50 3.27
2497 10281 3.944015 AGCATTGGTAAGCTCAATCAGAC 59.056 43.478 0.00 0.00 36.00 3.51
2498 10282 3.691118 GCATTGGTAAGCTCAATCAGACA 59.309 43.478 0.00 0.00 33.08 3.41
2499 10283 4.437930 GCATTGGTAAGCTCAATCAGACAC 60.438 45.833 0.00 0.00 33.08 3.67
2500 10284 4.350368 TTGGTAAGCTCAATCAGACACA 57.650 40.909 0.00 0.00 0.00 3.72
2501 10285 4.350368 TGGTAAGCTCAATCAGACACAA 57.650 40.909 0.00 0.00 0.00 3.33
2502 10286 4.713553 TGGTAAGCTCAATCAGACACAAA 58.286 39.130 0.00 0.00 0.00 2.83
2503 10287 5.316167 TGGTAAGCTCAATCAGACACAAAT 58.684 37.500 0.00 0.00 0.00 2.32
2504 10288 6.472016 TGGTAAGCTCAATCAGACACAAATA 58.528 36.000 0.00 0.00 0.00 1.40
2505 10289 6.939730 TGGTAAGCTCAATCAGACACAAATAA 59.060 34.615 0.00 0.00 0.00 1.40
2506 10290 7.611467 TGGTAAGCTCAATCAGACACAAATAAT 59.389 33.333 0.00 0.00 0.00 1.28
2507 10291 7.912250 GGTAAGCTCAATCAGACACAAATAATG 59.088 37.037 0.00 0.00 0.00 1.90
2508 10292 6.446781 AGCTCAATCAGACACAAATAATGG 57.553 37.500 0.00 0.00 0.00 3.16
2509 10293 6.182627 AGCTCAATCAGACACAAATAATGGA 58.817 36.000 0.00 0.00 0.00 3.41
2510 10294 6.832384 AGCTCAATCAGACACAAATAATGGAT 59.168 34.615 0.00 0.00 0.00 3.41
2511 10295 7.013083 AGCTCAATCAGACACAAATAATGGATC 59.987 37.037 0.00 0.00 0.00 3.36
2512 10296 7.250445 TCAATCAGACACAAATAATGGATCG 57.750 36.000 0.00 0.00 0.00 3.69
2513 10297 6.260714 TCAATCAGACACAAATAATGGATCGG 59.739 38.462 0.00 0.00 0.00 4.18
2514 10298 3.876914 TCAGACACAAATAATGGATCGGC 59.123 43.478 0.00 0.00 0.00 5.54
2515 10299 3.627123 CAGACACAAATAATGGATCGGCA 59.373 43.478 0.00 0.00 0.00 5.69
2516 10300 4.096231 CAGACACAAATAATGGATCGGCAA 59.904 41.667 0.00 0.00 0.00 4.52
2517 10301 4.889409 AGACACAAATAATGGATCGGCAAT 59.111 37.500 0.00 0.00 0.00 3.56
2518 10302 5.009010 AGACACAAATAATGGATCGGCAATC 59.991 40.000 0.00 0.00 0.00 2.67
2519 10303 4.221342 CACAAATAATGGATCGGCAATCG 58.779 43.478 0.00 0.00 40.90 3.34
2527 10311 2.186903 TCGGCAATCGAAGGGAGC 59.813 61.111 0.00 0.00 45.86 4.70
2528 10312 2.125147 CGGCAATCGAAGGGAGCA 60.125 61.111 0.00 0.00 42.43 4.26
2529 10313 1.524621 CGGCAATCGAAGGGAGCAT 60.525 57.895 0.00 0.00 42.43 3.79
2530 10314 1.502163 CGGCAATCGAAGGGAGCATC 61.502 60.000 0.00 0.00 42.43 3.91
2531 10315 0.464373 GGCAATCGAAGGGAGCATCA 60.464 55.000 0.00 0.00 36.25 3.07
2532 10316 1.382522 GCAATCGAAGGGAGCATCAA 58.617 50.000 0.00 0.00 36.25 2.57
2533 10317 1.745087 GCAATCGAAGGGAGCATCAAA 59.255 47.619 0.00 0.00 36.25 2.69
2534 10318 2.164219 GCAATCGAAGGGAGCATCAAAA 59.836 45.455 0.00 0.00 36.25 2.44
2535 10319 3.733077 GCAATCGAAGGGAGCATCAAAAG 60.733 47.826 0.00 0.00 36.25 2.27
2536 10320 2.113860 TCGAAGGGAGCATCAAAAGG 57.886 50.000 0.00 0.00 36.25 3.11
2537 10321 0.453390 CGAAGGGAGCATCAAAAGGC 59.547 55.000 0.00 0.00 36.25 4.35
2546 10330 4.612264 AGCATCAAAAGGCTCAACAAAT 57.388 36.364 0.00 0.00 38.34 2.32
2547 10331 4.964593 AGCATCAAAAGGCTCAACAAATT 58.035 34.783 0.00 0.00 38.34 1.82
2548 10332 6.100404 AGCATCAAAAGGCTCAACAAATTA 57.900 33.333 0.00 0.00 38.34 1.40
2549 10333 5.928264 AGCATCAAAAGGCTCAACAAATTAC 59.072 36.000 0.00 0.00 38.34 1.89
2550 10334 5.695816 GCATCAAAAGGCTCAACAAATTACA 59.304 36.000 0.00 0.00 0.00 2.41
2551 10335 6.346838 GCATCAAAAGGCTCAACAAATTACAC 60.347 38.462 0.00 0.00 0.00 2.90
2552 10336 6.214191 TCAAAAGGCTCAACAAATTACACA 57.786 33.333 0.00 0.00 0.00 3.72
2553 10337 6.634805 TCAAAAGGCTCAACAAATTACACAA 58.365 32.000 0.00 0.00 0.00 3.33
2554 10338 6.533367 TCAAAAGGCTCAACAAATTACACAAC 59.467 34.615 0.00 0.00 0.00 3.32
2555 10339 5.590530 AAGGCTCAACAAATTACACAACA 57.409 34.783 0.00 0.00 0.00 3.33
2556 10340 5.789643 AGGCTCAACAAATTACACAACAT 57.210 34.783 0.00 0.00 0.00 2.71
2557 10341 5.531634 AGGCTCAACAAATTACACAACATG 58.468 37.500 0.00 0.00 0.00 3.21
2558 10342 4.685628 GGCTCAACAAATTACACAACATGG 59.314 41.667 0.00 0.00 0.00 3.66
2559 10343 4.150451 GCTCAACAAATTACACAACATGGC 59.850 41.667 0.00 0.00 0.00 4.40
2560 10344 4.626042 TCAACAAATTACACAACATGGCC 58.374 39.130 0.00 0.00 0.00 5.36
2561 10345 4.100035 TCAACAAATTACACAACATGGCCA 59.900 37.500 8.56 8.56 0.00 5.36
2562 10346 4.255833 ACAAATTACACAACATGGCCAG 57.744 40.909 13.05 6.08 0.00 4.85
2563 10347 2.995258 CAAATTACACAACATGGCCAGC 59.005 45.455 13.05 0.00 0.00 4.85
2564 10348 2.220653 ATTACACAACATGGCCAGCT 57.779 45.000 13.05 0.00 0.00 4.24
2565 10349 2.869101 TTACACAACATGGCCAGCTA 57.131 45.000 13.05 0.00 0.00 3.32
2566 10350 2.869101 TACACAACATGGCCAGCTAA 57.131 45.000 13.05 0.00 0.00 3.09
2567 10351 1.247567 ACACAACATGGCCAGCTAAC 58.752 50.000 13.05 0.00 0.00 2.34
2568 10352 1.202927 ACACAACATGGCCAGCTAACT 60.203 47.619 13.05 0.00 0.00 2.24
2569 10353 2.039746 ACACAACATGGCCAGCTAACTA 59.960 45.455 13.05 0.00 0.00 2.24
2570 10354 3.282021 CACAACATGGCCAGCTAACTAT 58.718 45.455 13.05 0.00 0.00 2.12
2571 10355 3.696051 CACAACATGGCCAGCTAACTATT 59.304 43.478 13.05 0.00 0.00 1.73
2572 10356 4.158394 CACAACATGGCCAGCTAACTATTT 59.842 41.667 13.05 0.00 0.00 1.40
2573 10357 5.356751 CACAACATGGCCAGCTAACTATTTA 59.643 40.000 13.05 0.00 0.00 1.40
2574 10358 5.949354 ACAACATGGCCAGCTAACTATTTAA 59.051 36.000 13.05 0.00 0.00 1.52
2575 10359 6.095440 ACAACATGGCCAGCTAACTATTTAAG 59.905 38.462 13.05 0.00 0.00 1.85
2576 10360 6.001449 ACATGGCCAGCTAACTATTTAAGA 57.999 37.500 13.05 0.00 0.00 2.10
2577 10361 6.423182 ACATGGCCAGCTAACTATTTAAGAA 58.577 36.000 13.05 0.00 0.00 2.52
2578 10362 6.889722 ACATGGCCAGCTAACTATTTAAGAAA 59.110 34.615 13.05 0.00 0.00 2.52
2579 10363 6.753107 TGGCCAGCTAACTATTTAAGAAAC 57.247 37.500 0.00 0.00 0.00 2.78
2580 10364 6.242396 TGGCCAGCTAACTATTTAAGAAACA 58.758 36.000 0.00 0.00 0.00 2.83
2581 10365 6.374333 TGGCCAGCTAACTATTTAAGAAACAG 59.626 38.462 0.00 0.00 0.00 3.16
2582 10366 6.374613 GGCCAGCTAACTATTTAAGAAACAGT 59.625 38.462 0.00 0.00 0.00 3.55
2583 10367 7.414208 GGCCAGCTAACTATTTAAGAAACAGTC 60.414 40.741 0.00 0.00 0.00 3.51
2584 10368 7.674240 GCCAGCTAACTATTTAAGAAACAGTCG 60.674 40.741 0.00 0.00 0.00 4.18
2585 10369 7.174082 CAGCTAACTATTTAAGAAACAGTCGC 58.826 38.462 0.00 0.00 0.00 5.19
2586 10370 6.313164 AGCTAACTATTTAAGAAACAGTCGCC 59.687 38.462 0.00 0.00 0.00 5.54
2587 10371 6.091713 GCTAACTATTTAAGAAACAGTCGCCA 59.908 38.462 0.00 0.00 0.00 5.69
2588 10372 6.870971 AACTATTTAAGAAACAGTCGCCAA 57.129 33.333 0.00 0.00 0.00 4.52
2589 10373 6.237313 ACTATTTAAGAAACAGTCGCCAAC 57.763 37.500 0.00 0.00 0.00 3.77
2590 10374 5.761234 ACTATTTAAGAAACAGTCGCCAACA 59.239 36.000 0.00 0.00 0.00 3.33
2591 10375 4.966965 TTTAAGAAACAGTCGCCAACAA 57.033 36.364 0.00 0.00 0.00 2.83
2592 10376 4.966965 TTAAGAAACAGTCGCCAACAAA 57.033 36.364 0.00 0.00 0.00 2.83
2593 10377 5.508200 TTAAGAAACAGTCGCCAACAAAT 57.492 34.783 0.00 0.00 0.00 2.32
2594 10378 6.621316 TTAAGAAACAGTCGCCAACAAATA 57.379 33.333 0.00 0.00 0.00 1.40
2595 10379 5.705609 AAGAAACAGTCGCCAACAAATAT 57.294 34.783 0.00 0.00 0.00 1.28
2596 10380 6.811253 AAGAAACAGTCGCCAACAAATATA 57.189 33.333 0.00 0.00 0.00 0.86
2597 10381 7.391148 AAGAAACAGTCGCCAACAAATATAT 57.609 32.000 0.00 0.00 0.00 0.86
2598 10382 8.500753 AAGAAACAGTCGCCAACAAATATATA 57.499 30.769 0.00 0.00 0.00 0.86
2599 10383 8.142994 AGAAACAGTCGCCAACAAATATATAG 57.857 34.615 0.00 0.00 0.00 1.31
2600 10384 7.769044 AGAAACAGTCGCCAACAAATATATAGT 59.231 33.333 0.00 0.00 0.00 2.12
2601 10385 7.859325 AACAGTCGCCAACAAATATATAGTT 57.141 32.000 0.00 0.00 0.00 2.24
2602 10386 8.951787 AACAGTCGCCAACAAATATATAGTTA 57.048 30.769 0.00 0.00 0.00 2.24
2603 10387 8.951787 ACAGTCGCCAACAAATATATAGTTAA 57.048 30.769 0.00 0.00 0.00 2.01
2604 10388 9.386010 ACAGTCGCCAACAAATATATAGTTAAA 57.614 29.630 0.00 0.00 0.00 1.52
2605 10389 9.646336 CAGTCGCCAACAAATATATAGTTAAAC 57.354 33.333 0.00 0.00 0.00 2.01
2606 10390 9.386010 AGTCGCCAACAAATATATAGTTAAACA 57.614 29.630 0.00 0.00 0.00 2.83
2607 10391 9.991388 GTCGCCAACAAATATATAGTTAAACAA 57.009 29.630 0.00 0.00 0.00 2.83
2608 10392 9.991388 TCGCCAACAAATATATAGTTAAACAAC 57.009 29.630 0.00 0.00 0.00 3.32
2609 10393 9.776158 CGCCAACAAATATATAGTTAAACAACA 57.224 29.630 0.00 0.00 0.00 3.33
2618 10402 5.873179 ATAGTTAAACAACATCCACACGG 57.127 39.130 0.00 0.00 0.00 4.94
2632 10416 5.670792 TCCACACGGAGTAGAAATTATGT 57.329 39.130 0.00 0.00 41.61 2.29
2633 10417 6.778834 TCCACACGGAGTAGAAATTATGTA 57.221 37.500 0.00 0.00 41.61 2.29
2634 10418 6.802608 TCCACACGGAGTAGAAATTATGTAG 58.197 40.000 0.00 0.00 41.61 2.74
2635 10419 6.379133 TCCACACGGAGTAGAAATTATGTAGT 59.621 38.462 0.00 0.00 41.61 2.73
2636 10420 6.696148 CCACACGGAGTAGAAATTATGTAGTC 59.304 42.308 0.00 0.00 41.61 2.59
2637 10421 6.414109 CACACGGAGTAGAAATTATGTAGTCG 59.586 42.308 0.00 0.00 41.61 4.18
2638 10422 6.094603 ACACGGAGTAGAAATTATGTAGTCGT 59.905 38.462 0.00 0.00 41.61 4.34
2639 10423 6.632035 CACGGAGTAGAAATTATGTAGTCGTC 59.368 42.308 0.00 0.00 41.61 4.20
2640 10424 6.317140 ACGGAGTAGAAATTATGTAGTCGTCA 59.683 38.462 0.00 0.00 41.94 4.35
2641 10425 7.148188 ACGGAGTAGAAATTATGTAGTCGTCAA 60.148 37.037 0.00 0.00 41.94 3.18
2642 10426 7.861372 CGGAGTAGAAATTATGTAGTCGTCAAT 59.139 37.037 0.00 0.00 29.87 2.57
2643 10427 9.530633 GGAGTAGAAATTATGTAGTCGTCAATT 57.469 33.333 0.00 0.00 29.87 2.32
2645 10429 8.818057 AGTAGAAATTATGTAGTCGTCAATTGC 58.182 33.333 0.00 0.00 0.00 3.56
2646 10430 6.705782 AGAAATTATGTAGTCGTCAATTGCG 58.294 36.000 13.74 13.74 0.00 4.85
2647 10431 3.918258 TTATGTAGTCGTCAATTGCGC 57.082 42.857 14.72 0.00 0.00 6.09
2648 10432 1.720805 ATGTAGTCGTCAATTGCGCA 58.279 45.000 5.66 5.66 0.00 6.09
2649 10433 1.720805 TGTAGTCGTCAATTGCGCAT 58.279 45.000 12.75 0.00 0.00 4.73
2650 10434 2.073056 TGTAGTCGTCAATTGCGCATT 58.927 42.857 12.75 4.45 0.00 3.56
2651 10435 3.254892 TGTAGTCGTCAATTGCGCATTA 58.745 40.909 12.75 0.00 0.00 1.90
2652 10436 2.806288 AGTCGTCAATTGCGCATTAC 57.194 45.000 12.75 6.39 0.00 1.89
2654 10438 1.072391 TCGTCAATTGCGCATTACGT 58.928 45.000 23.96 0.00 46.11 3.57
2655 10439 2.028284 GTCGTCAATTGCGCATTACGTA 59.972 45.455 23.96 6.90 46.11 3.57
2656 10440 2.028284 TCGTCAATTGCGCATTACGTAC 59.972 45.455 23.96 13.28 46.11 3.67
2657 10441 2.028763 CGTCAATTGCGCATTACGTACT 59.971 45.455 12.75 0.00 46.11 2.73
2658 10442 3.342269 GTCAATTGCGCATTACGTACTG 58.658 45.455 12.75 8.47 46.11 2.74
2659 10443 2.101125 CAATTGCGCATTACGTACTGC 58.899 47.619 23.67 23.67 46.11 4.40
2660 10444 0.655733 ATTGCGCATTACGTACTGCC 59.344 50.000 26.28 20.13 46.11 4.85
2661 10445 1.363145 TTGCGCATTACGTACTGCCC 61.363 55.000 26.28 20.18 46.11 5.36
2662 10446 1.520787 GCGCATTACGTACTGCCCT 60.521 57.895 26.28 0.00 46.11 5.19
2663 10447 0.249155 GCGCATTACGTACTGCCCTA 60.249 55.000 26.28 0.00 46.11 3.53
2664 10448 1.604693 GCGCATTACGTACTGCCCTAT 60.605 52.381 26.28 0.38 46.11 2.57
2665 10449 2.750948 CGCATTACGTACTGCCCTATT 58.249 47.619 26.28 0.00 34.89 1.73
2666 10450 2.475111 CGCATTACGTACTGCCCTATTG 59.525 50.000 26.28 11.68 34.89 1.90
2667 10451 2.223377 GCATTACGTACTGCCCTATTGC 59.777 50.000 23.21 4.53 32.15 3.56
2668 10452 3.462982 CATTACGTACTGCCCTATTGCA 58.537 45.455 0.00 0.00 39.37 4.08
2669 10453 3.830744 TTACGTACTGCCCTATTGCAT 57.169 42.857 0.00 0.00 41.16 3.96
2670 10454 2.240493 ACGTACTGCCCTATTGCATC 57.760 50.000 0.00 0.00 41.16 3.91
2671 10455 1.202651 ACGTACTGCCCTATTGCATCC 60.203 52.381 0.00 0.00 41.16 3.51
2672 10456 1.878102 CGTACTGCCCTATTGCATCCC 60.878 57.143 0.00 0.00 41.16 3.85
2673 10457 0.396435 TACTGCCCTATTGCATCCCG 59.604 55.000 0.00 0.00 41.16 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 3829 7.331791 ACTTCTGTTATAAAAGCGAGGAAGAT 58.668 34.615 8.03 0.00 33.95 2.40
138 3959 0.600557 CCTCGAGCTCAGTCACAACT 59.399 55.000 15.40 0.00 35.60 3.16
324 4147 4.528596 ACATTTTCCTCTCTTTCTCCGAGA 59.471 41.667 0.00 0.00 36.22 4.04
347 4170 1.257743 CTCCGTTGTCTTCTCCCAGA 58.742 55.000 0.00 0.00 0.00 3.86
381 4204 1.001020 CAGCCATGTGCCCCTTACA 60.001 57.895 2.95 0.00 42.71 2.41
406 4229 8.705134 CACACGTTCACATATGTTTTTACTAGA 58.295 33.333 5.37 0.00 0.00 2.43
558 4381 3.244457 TGAGACTTGGACTGAGACGTAGA 60.244 47.826 0.00 0.00 0.00 2.59
649 4483 9.981114 TCGATACTATATTCTTTTGATCTTGCA 57.019 29.630 0.00 0.00 0.00 4.08
669 4503 9.776158 CCTTGTACTATATCACTCAATCGATAC 57.224 37.037 0.00 0.00 0.00 2.24
670 4504 9.734984 TCCTTGTACTATATCACTCAATCGATA 57.265 33.333 0.00 0.00 0.00 2.92
671 4505 8.637196 TCCTTGTACTATATCACTCAATCGAT 57.363 34.615 0.00 0.00 0.00 3.59
672 4506 7.937394 TCTCCTTGTACTATATCACTCAATCGA 59.063 37.037 0.00 0.00 0.00 3.59
673 4507 8.100508 TCTCCTTGTACTATATCACTCAATCG 57.899 38.462 0.00 0.00 0.00 3.34
806 4651 8.925161 TGAATGTATAATAAAACAGCTTTGCC 57.075 30.769 0.00 0.00 0.00 4.52
854 8591 8.792831 TCAACGTGAAACTCTTTTACTAGTAG 57.207 34.615 2.23 0.00 31.75 2.57
855 8592 9.188588 CATCAACGTGAAACTCTTTTACTAGTA 57.811 33.333 0.00 0.00 31.75 1.82
922 8659 0.600557 TGGTGGCGCTGTAAATTTGG 59.399 50.000 7.64 0.00 0.00 3.28
923 8660 2.164219 AGATGGTGGCGCTGTAAATTTG 59.836 45.455 7.64 0.00 0.00 2.32
924 8661 2.446435 AGATGGTGGCGCTGTAAATTT 58.554 42.857 7.64 0.00 0.00 1.82
925 8662 2.128771 AGATGGTGGCGCTGTAAATT 57.871 45.000 7.64 0.00 0.00 1.82
963 8717 7.408756 AGTCTCGACTCGACCTATATATACT 57.591 40.000 0.00 0.00 36.92 2.12
983 8742 5.475220 TCTGATTTGTTTCTCTCTCGAGTCT 59.525 40.000 13.13 0.00 38.45 3.24
984 8743 5.571357 GTCTGATTTGTTTCTCTCTCGAGTC 59.429 44.000 13.13 0.00 38.45 3.36
985 8744 5.465935 GTCTGATTTGTTTCTCTCTCGAGT 58.534 41.667 13.13 0.00 38.45 4.18
986 8745 4.556912 CGTCTGATTTGTTTCTCTCTCGAG 59.443 45.833 5.93 5.93 38.67 4.04
987 8746 4.215613 TCGTCTGATTTGTTTCTCTCTCGA 59.784 41.667 0.00 0.00 0.00 4.04
988 8747 4.322274 GTCGTCTGATTTGTTTCTCTCTCG 59.678 45.833 0.00 0.00 0.00 4.04
1041 8800 0.105760 GAGCAGGAGGAGGAGGATGA 60.106 60.000 0.00 0.00 0.00 2.92
1043 8802 1.152567 CGAGCAGGAGGAGGAGGAT 60.153 63.158 0.00 0.00 0.00 3.24
1049 8808 2.487428 CACGACGAGCAGGAGGAG 59.513 66.667 0.00 0.00 0.00 3.69
1141 8900 2.486322 GAAGTCGTAGTCGTGCGCG 61.486 63.158 14.79 14.79 38.33 6.86
1322 9087 2.665185 GTCCTTGGCGCACTCGTT 60.665 61.111 10.83 0.00 38.14 3.85
1475 9246 3.854669 CTCGCCGGCCCTGAAGAT 61.855 66.667 23.46 0.00 0.00 2.40
1513 9284 2.081212 GTCGTTGAGCTCGTGGACG 61.081 63.158 19.28 19.28 41.45 4.79
1515 9286 2.254350 CGTCGTTGAGCTCGTGGA 59.746 61.111 9.64 2.66 0.00 4.02
1802 9580 5.470777 TGAAAATCGAACGGTAACATTCCTT 59.529 36.000 0.00 0.00 0.00 3.36
1808 9586 4.209703 GTCAGTGAAAATCGAACGGTAACA 59.790 41.667 0.00 0.00 0.00 2.41
1843 9621 5.104776 TGGAGAATCACAGAACCCTCAATAG 60.105 44.000 0.00 0.00 36.25 1.73
1844 9622 4.782691 TGGAGAATCACAGAACCCTCAATA 59.217 41.667 0.00 0.00 36.25 1.90
1909 9693 4.489306 AAAGGCCAGAGAGGTTACATAC 57.511 45.455 5.01 0.00 40.61 2.39
1955 9739 7.466996 GCCTATCAGAATCACAAGAAAGACATG 60.467 40.741 0.00 0.00 0.00 3.21
1999 9783 5.539048 ACAGTAGAGAAACATGGTGTACAC 58.461 41.667 18.01 18.01 0.00 2.90
2039 9823 2.289444 TGCAGACTAAAAAGGACCGGAG 60.289 50.000 9.46 0.00 0.00 4.63
2040 9824 1.695242 TGCAGACTAAAAAGGACCGGA 59.305 47.619 9.46 0.00 0.00 5.14
2041 9825 2.178912 TGCAGACTAAAAAGGACCGG 57.821 50.000 0.00 0.00 0.00 5.28
2042 9826 6.761714 ACTTATATGCAGACTAAAAAGGACCG 59.238 38.462 0.00 0.00 0.00 4.79
2043 9827 8.507524 AACTTATATGCAGACTAAAAAGGACC 57.492 34.615 0.00 0.00 0.00 4.46
2049 9833 8.447833 CGGACAAAACTTATATGCAGACTAAAA 58.552 33.333 0.00 0.00 0.00 1.52
2050 9834 7.820386 TCGGACAAAACTTATATGCAGACTAAA 59.180 33.333 0.00 0.00 0.00 1.85
2051 9835 7.324935 TCGGACAAAACTTATATGCAGACTAA 58.675 34.615 0.00 0.00 0.00 2.24
2052 9836 6.869695 TCGGACAAAACTTATATGCAGACTA 58.130 36.000 0.00 0.00 0.00 2.59
2053 9837 5.730550 TCGGACAAAACTTATATGCAGACT 58.269 37.500 0.00 0.00 0.00 3.24
2054 9838 6.092259 ACTTCGGACAAAACTTATATGCAGAC 59.908 38.462 0.00 0.00 0.00 3.51
2055 9839 6.170506 ACTTCGGACAAAACTTATATGCAGA 58.829 36.000 0.00 0.00 0.00 4.26
2056 9840 6.092122 TGACTTCGGACAAAACTTATATGCAG 59.908 38.462 0.00 0.00 0.00 4.41
2057 9841 5.935206 TGACTTCGGACAAAACTTATATGCA 59.065 36.000 0.00 0.00 0.00 3.96
2058 9842 6.417191 TGACTTCGGACAAAACTTATATGC 57.583 37.500 0.00 0.00 0.00 3.14
2059 9843 9.840427 ATTTTGACTTCGGACAAAACTTATATG 57.160 29.630 0.00 0.00 46.03 1.78
2062 9846 9.063615 AGTATTTTGACTTCGGACAAAACTTAT 57.936 29.630 0.00 0.00 46.03 1.73
2063 9847 8.441312 AGTATTTTGACTTCGGACAAAACTTA 57.559 30.769 0.00 0.00 46.03 2.24
2064 9848 7.329588 AGTATTTTGACTTCGGACAAAACTT 57.670 32.000 0.00 0.00 46.03 2.66
2065 9849 6.937436 AGTATTTTGACTTCGGACAAAACT 57.063 33.333 0.00 0.00 46.03 2.66
2066 9850 7.604714 GAAGTATTTTGACTTCGGACAAAAC 57.395 36.000 0.00 0.00 46.03 2.43
2112 9896 4.021192 CCACTGGGCATGTTGATACTTTTT 60.021 41.667 0.00 0.00 0.00 1.94
2113 9897 3.511146 CCACTGGGCATGTTGATACTTTT 59.489 43.478 0.00 0.00 0.00 2.27
2114 9898 3.091545 CCACTGGGCATGTTGATACTTT 58.908 45.455 0.00 0.00 0.00 2.66
2115 9899 2.726821 CCACTGGGCATGTTGATACTT 58.273 47.619 0.00 0.00 0.00 2.24
2116 9900 2.425143 CCACTGGGCATGTTGATACT 57.575 50.000 0.00 0.00 0.00 2.12
2128 9912 0.937304 CGTATCGATTTGCCACTGGG 59.063 55.000 1.71 0.00 37.18 4.45
2129 9913 0.937304 CCGTATCGATTTGCCACTGG 59.063 55.000 1.71 0.00 0.00 4.00
2130 9914 1.651987 ACCGTATCGATTTGCCACTG 58.348 50.000 1.71 0.00 0.00 3.66
2131 9915 2.396590 AACCGTATCGATTTGCCACT 57.603 45.000 1.71 0.00 0.00 4.00
2132 9916 3.450578 TCTAACCGTATCGATTTGCCAC 58.549 45.455 1.71 0.00 0.00 5.01
2133 9917 3.804786 TCTAACCGTATCGATTTGCCA 57.195 42.857 1.71 0.00 0.00 4.92
2134 9918 4.748102 TGAATCTAACCGTATCGATTTGCC 59.252 41.667 1.71 0.00 0.00 4.52
2135 9919 5.900339 TGAATCTAACCGTATCGATTTGC 57.100 39.130 1.71 0.00 0.00 3.68
2136 9920 9.958285 CATAATGAATCTAACCGTATCGATTTG 57.042 33.333 1.71 0.00 0.00 2.32
2137 9921 9.923143 TCATAATGAATCTAACCGTATCGATTT 57.077 29.630 1.71 0.00 0.00 2.17
2138 9922 9.923143 TTCATAATGAATCTAACCGTATCGATT 57.077 29.630 1.71 0.00 30.26 3.34
2139 9923 9.923143 TTTCATAATGAATCTAACCGTATCGAT 57.077 29.630 2.16 2.16 36.11 3.59
2140 9924 9.923143 ATTTCATAATGAATCTAACCGTATCGA 57.077 29.630 0.00 0.00 36.11 3.59
2141 9925 9.958285 CATTTCATAATGAATCTAACCGTATCG 57.042 33.333 0.00 0.00 43.12 2.92
2145 9929 9.832445 ACTACATTTCATAATGAATCTAACCGT 57.168 29.630 0.04 0.00 43.12 4.83
2229 10013 8.372521 GTGTCAAGTCAAACTTTGTAATGTTTG 58.627 33.333 20.94 20.94 46.71 2.93
2230 10014 8.085296 TGTGTCAAGTCAAACTTTGTAATGTTT 58.915 29.630 1.44 3.60 36.03 2.83
2231 10015 7.598278 TGTGTCAAGTCAAACTTTGTAATGTT 58.402 30.769 1.44 0.00 36.03 2.71
2232 10016 7.151999 TGTGTCAAGTCAAACTTTGTAATGT 57.848 32.000 1.44 0.00 36.03 2.71
2233 10017 8.459521 TTTGTGTCAAGTCAAACTTTGTAATG 57.540 30.769 1.44 0.55 36.03 1.90
2234 10018 9.301153 GATTTGTGTCAAGTCAAACTTTGTAAT 57.699 29.630 1.44 0.00 36.03 1.89
2235 10019 8.519526 AGATTTGTGTCAAGTCAAACTTTGTAA 58.480 29.630 1.44 0.00 36.03 2.41
2236 10020 8.050778 AGATTTGTGTCAAGTCAAACTTTGTA 57.949 30.769 1.44 0.00 36.03 2.41
2237 10021 6.924111 AGATTTGTGTCAAGTCAAACTTTGT 58.076 32.000 1.44 0.00 36.03 2.83
2238 10022 8.909708 TTAGATTTGTGTCAAGTCAAACTTTG 57.090 30.769 7.50 0.00 36.03 2.77
2241 10025 8.495949 CGTATTAGATTTGTGTCAAGTCAAACT 58.504 33.333 7.50 0.00 36.58 2.66
2242 10026 7.268447 GCGTATTAGATTTGTGTCAAGTCAAAC 59.732 37.037 7.50 1.03 36.58 2.93
2243 10027 7.295201 GCGTATTAGATTTGTGTCAAGTCAAA 58.705 34.615 7.50 0.00 37.82 2.69
2244 10028 6.400621 CGCGTATTAGATTTGTGTCAAGTCAA 60.401 38.462 0.00 2.05 0.00 3.18
2245 10029 5.061684 CGCGTATTAGATTTGTGTCAAGTCA 59.938 40.000 0.00 0.00 0.00 3.41
2246 10030 5.481472 CGCGTATTAGATTTGTGTCAAGTC 58.519 41.667 0.00 0.00 0.00 3.01
2247 10031 4.328983 CCGCGTATTAGATTTGTGTCAAGT 59.671 41.667 4.92 0.00 0.00 3.16
2248 10032 4.565166 TCCGCGTATTAGATTTGTGTCAAG 59.435 41.667 4.92 0.00 0.00 3.02
2249 10033 4.496360 TCCGCGTATTAGATTTGTGTCAA 58.504 39.130 4.92 0.00 0.00 3.18
2250 10034 4.109766 CTCCGCGTATTAGATTTGTGTCA 58.890 43.478 4.92 0.00 0.00 3.58
2251 10035 4.110482 ACTCCGCGTATTAGATTTGTGTC 58.890 43.478 4.92 0.00 0.00 3.67
2252 10036 4.119442 ACTCCGCGTATTAGATTTGTGT 57.881 40.909 4.92 0.00 0.00 3.72
2253 10037 6.578020 TTTACTCCGCGTATTAGATTTGTG 57.422 37.500 4.92 0.00 0.00 3.33
2254 10038 7.201582 CCTTTTTACTCCGCGTATTAGATTTGT 60.202 37.037 4.92 0.00 0.00 2.83
2255 10039 7.010738 TCCTTTTTACTCCGCGTATTAGATTTG 59.989 37.037 4.92 0.00 0.00 2.32
2256 10040 7.010830 GTCCTTTTTACTCCGCGTATTAGATTT 59.989 37.037 4.92 0.00 0.00 2.17
2257 10041 6.478016 GTCCTTTTTACTCCGCGTATTAGATT 59.522 38.462 4.92 0.00 0.00 2.40
2258 10042 5.981915 GTCCTTTTTACTCCGCGTATTAGAT 59.018 40.000 4.92 0.00 0.00 1.98
2259 10043 5.343249 GTCCTTTTTACTCCGCGTATTAGA 58.657 41.667 4.92 0.00 0.00 2.10
2260 10044 4.505556 GGTCCTTTTTACTCCGCGTATTAG 59.494 45.833 4.92 0.00 0.00 1.73
2261 10045 4.432712 GGTCCTTTTTACTCCGCGTATTA 58.567 43.478 4.92 0.00 0.00 0.98
2262 10046 3.264947 GGTCCTTTTTACTCCGCGTATT 58.735 45.455 4.92 0.00 0.00 1.89
2263 10047 2.736400 CGGTCCTTTTTACTCCGCGTAT 60.736 50.000 4.92 0.00 35.01 3.06
2264 10048 1.402720 CGGTCCTTTTTACTCCGCGTA 60.403 52.381 4.92 0.00 35.01 4.42
2265 10049 0.668401 CGGTCCTTTTTACTCCGCGT 60.668 55.000 4.92 0.00 35.01 6.01
2266 10050 1.356527 CCGGTCCTTTTTACTCCGCG 61.357 60.000 0.00 0.00 39.87 6.46
2267 10051 0.037046 TCCGGTCCTTTTTACTCCGC 60.037 55.000 0.00 0.00 39.87 5.54
2268 10052 1.405121 CCTCCGGTCCTTTTTACTCCG 60.405 57.143 0.00 0.00 40.72 4.63
2269 10053 1.065636 CCCTCCGGTCCTTTTTACTCC 60.066 57.143 0.00 0.00 0.00 3.85
2270 10054 1.904537 TCCCTCCGGTCCTTTTTACTC 59.095 52.381 0.00 0.00 0.00 2.59
2271 10055 1.907255 CTCCCTCCGGTCCTTTTTACT 59.093 52.381 0.00 0.00 0.00 2.24
2272 10056 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
2273 10057 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
2274 10058 1.627329 GTACTCCCTCCGGTCCTTTTT 59.373 52.381 0.00 0.00 0.00 1.94
2275 10059 1.273759 GTACTCCCTCCGGTCCTTTT 58.726 55.000 0.00 0.00 0.00 2.27
2276 10060 0.616964 GGTACTCCCTCCGGTCCTTT 60.617 60.000 0.00 0.00 0.00 3.11
2277 10061 1.001376 GGTACTCCCTCCGGTCCTT 59.999 63.158 0.00 0.00 0.00 3.36
2278 10062 2.226149 CTGGTACTCCCTCCGGTCCT 62.226 65.000 0.00 0.00 0.00 3.85
2279 10063 1.757340 CTGGTACTCCCTCCGGTCC 60.757 68.421 0.00 0.00 0.00 4.46
2280 10064 1.757340 CCTGGTACTCCCTCCGGTC 60.757 68.421 0.00 0.00 0.00 4.79
2281 10065 1.217057 TACCTGGTACTCCCTCCGGT 61.217 60.000 1.49 0.00 35.81 5.28
2282 10066 0.467659 CTACCTGGTACTCCCTCCGG 60.468 65.000 1.49 0.00 0.00 5.14
2283 10067 0.467659 CCTACCTGGTACTCCCTCCG 60.468 65.000 1.49 0.00 0.00 4.63
2284 10068 0.932211 TCCTACCTGGTACTCCCTCC 59.068 60.000 1.49 0.00 37.07 4.30
2285 10069 2.842645 TTCCTACCTGGTACTCCCTC 57.157 55.000 1.49 0.00 37.07 4.30
2286 10070 3.385115 CATTTCCTACCTGGTACTCCCT 58.615 50.000 1.49 0.00 37.07 4.20
2287 10071 2.158798 GCATTTCCTACCTGGTACTCCC 60.159 54.545 1.49 0.00 37.07 4.30
2288 10072 2.483188 CGCATTTCCTACCTGGTACTCC 60.483 54.545 1.49 0.00 37.07 3.85
2289 10073 2.429610 TCGCATTTCCTACCTGGTACTC 59.570 50.000 1.49 0.00 37.07 2.59
2290 10074 2.167900 GTCGCATTTCCTACCTGGTACT 59.832 50.000 1.49 0.00 37.07 2.73
2291 10075 2.167900 AGTCGCATTTCCTACCTGGTAC 59.832 50.000 1.49 0.00 37.07 3.34
2292 10076 2.463752 AGTCGCATTTCCTACCTGGTA 58.536 47.619 6.36 6.36 37.07 3.25
2293 10077 1.276622 AGTCGCATTTCCTACCTGGT 58.723 50.000 4.05 4.05 37.07 4.00
2294 10078 2.009774 CAAGTCGCATTTCCTACCTGG 58.990 52.381 0.00 0.00 37.10 4.45
2295 10079 1.398390 GCAAGTCGCATTTCCTACCTG 59.602 52.381 0.00 0.00 41.79 4.00
2296 10080 1.679032 GGCAAGTCGCATTTCCTACCT 60.679 52.381 0.00 0.00 45.17 3.08
2297 10081 0.733150 GGCAAGTCGCATTTCCTACC 59.267 55.000 0.00 0.00 45.17 3.18
2298 10082 0.373716 CGGCAAGTCGCATTTCCTAC 59.626 55.000 0.00 0.00 45.17 3.18
2299 10083 2.762360 CGGCAAGTCGCATTTCCTA 58.238 52.632 0.00 0.00 45.17 2.94
2300 10084 3.578456 CGGCAAGTCGCATTTCCT 58.422 55.556 0.00 0.00 45.17 3.36
2309 10093 4.980805 TGTCGGGTGCGGCAAGTC 62.981 66.667 3.23 0.00 0.00 3.01
2310 10094 4.555709 TTGTCGGGTGCGGCAAGT 62.556 61.111 3.23 0.00 0.00 3.16
2311 10095 4.025401 GTTGTCGGGTGCGGCAAG 62.025 66.667 3.23 0.00 0.00 4.01
2315 10099 3.487202 CATCGTTGTCGGGTGCGG 61.487 66.667 0.00 0.00 37.69 5.69
2316 10100 4.147322 GCATCGTTGTCGGGTGCG 62.147 66.667 0.00 0.00 38.45 5.34
2317 10101 2.742372 AGCATCGTTGTCGGGTGC 60.742 61.111 9.46 9.46 43.55 5.01
2318 10102 1.626654 GACAGCATCGTTGTCGGGTG 61.627 60.000 0.00 0.00 36.01 4.61
2319 10103 1.374252 GACAGCATCGTTGTCGGGT 60.374 57.895 0.00 0.00 36.01 5.28
2320 10104 3.474806 GACAGCATCGTTGTCGGG 58.525 61.111 0.00 0.00 36.01 5.14
2329 10113 3.944055 ATGACTATACCCGACAGCATC 57.056 47.619 0.00 0.00 0.00 3.91
2330 10114 4.402793 GGATATGACTATACCCGACAGCAT 59.597 45.833 0.00 0.00 0.00 3.79
2331 10115 3.762288 GGATATGACTATACCCGACAGCA 59.238 47.826 0.00 0.00 0.00 4.41
2332 10116 3.762288 TGGATATGACTATACCCGACAGC 59.238 47.826 0.00 0.00 0.00 4.40
2333 10117 5.977489 TTGGATATGACTATACCCGACAG 57.023 43.478 0.00 0.00 0.00 3.51
2334 10118 6.152831 CAGATTGGATATGACTATACCCGACA 59.847 42.308 0.00 0.00 0.00 4.35
2335 10119 6.405953 CCAGATTGGATATGACTATACCCGAC 60.406 46.154 0.00 0.00 40.96 4.79
2336 10120 5.656859 CCAGATTGGATATGACTATACCCGA 59.343 44.000 0.00 0.00 40.96 5.14
2337 10121 5.422331 ACCAGATTGGATATGACTATACCCG 59.578 44.000 1.40 0.00 40.96 5.28
2338 10122 6.875972 ACCAGATTGGATATGACTATACCC 57.124 41.667 1.40 0.00 40.96 3.69
2343 10127 8.531982 GCTGTATTACCAGATTGGATATGACTA 58.468 37.037 1.40 0.00 40.96 2.59
2344 10128 7.390027 GCTGTATTACCAGATTGGATATGACT 58.610 38.462 1.40 0.00 40.96 3.41
2345 10129 6.595716 GGCTGTATTACCAGATTGGATATGAC 59.404 42.308 1.40 0.00 40.96 3.06
2346 10130 6.272090 TGGCTGTATTACCAGATTGGATATGA 59.728 38.462 1.40 0.00 40.96 2.15
2347 10131 6.475504 TGGCTGTATTACCAGATTGGATATG 58.524 40.000 1.40 0.00 40.96 1.78
2348 10132 6.702449 TGGCTGTATTACCAGATTGGATAT 57.298 37.500 1.40 0.00 40.96 1.63
2349 10133 6.702449 ATGGCTGTATTACCAGATTGGATA 57.298 37.500 1.40 0.00 40.96 2.59
2350 10134 5.589367 ATGGCTGTATTACCAGATTGGAT 57.411 39.130 1.40 0.00 40.96 3.41
2351 10135 5.104151 TCAATGGCTGTATTACCAGATTGGA 60.104 40.000 1.40 0.00 40.96 3.53
2352 10136 5.132502 TCAATGGCTGTATTACCAGATTGG 58.867 41.667 0.00 0.00 45.02 3.16
2353 10137 6.698008 TTCAATGGCTGTATTACCAGATTG 57.302 37.500 0.00 0.00 39.88 2.67
2354 10138 6.205464 CGATTCAATGGCTGTATTACCAGATT 59.795 38.462 0.00 0.00 39.88 2.40
2355 10139 5.702670 CGATTCAATGGCTGTATTACCAGAT 59.297 40.000 0.00 0.00 39.88 2.90
2356 10140 5.056480 CGATTCAATGGCTGTATTACCAGA 58.944 41.667 0.00 0.00 39.88 3.86
2357 10141 4.816385 ACGATTCAATGGCTGTATTACCAG 59.184 41.667 0.00 0.00 39.88 4.00
2358 10142 4.776349 ACGATTCAATGGCTGTATTACCA 58.224 39.130 0.00 0.00 41.06 3.25
2359 10143 8.718102 ATATACGATTCAATGGCTGTATTACC 57.282 34.615 0.00 0.00 0.00 2.85
2364 10148 9.586435 CTTGATATATACGATTCAATGGCTGTA 57.414 33.333 0.00 0.00 0.00 2.74
2365 10149 8.097038 ACTTGATATATACGATTCAATGGCTGT 58.903 33.333 0.00 0.00 0.00 4.40
2366 10150 8.484641 ACTTGATATATACGATTCAATGGCTG 57.515 34.615 0.00 0.00 0.00 4.85
2367 10151 9.507329 AAACTTGATATATACGATTCAATGGCT 57.493 29.630 0.00 0.00 0.00 4.75
2399 10183 8.748412 ACCAATTGCTATGTACAAAATGTGTAT 58.252 29.630 0.00 0.00 44.52 2.29
2400 10184 8.116651 ACCAATTGCTATGTACAAAATGTGTA 57.883 30.769 0.00 0.00 41.98 2.90
2401 10185 6.991938 ACCAATTGCTATGTACAAAATGTGT 58.008 32.000 0.00 0.00 44.82 3.72
2402 10186 6.531240 GGACCAATTGCTATGTACAAAATGTG 59.469 38.462 0.00 0.00 0.00 3.21
2403 10187 6.210385 TGGACCAATTGCTATGTACAAAATGT 59.790 34.615 0.00 0.00 0.00 2.71
2404 10188 6.629128 TGGACCAATTGCTATGTACAAAATG 58.371 36.000 0.00 0.00 0.00 2.32
2405 10189 6.127366 CCTGGACCAATTGCTATGTACAAAAT 60.127 38.462 0.00 0.00 0.00 1.82
2406 10190 5.184864 CCTGGACCAATTGCTATGTACAAAA 59.815 40.000 0.00 0.00 0.00 2.44
2407 10191 4.704540 CCTGGACCAATTGCTATGTACAAA 59.295 41.667 0.00 0.00 0.00 2.83
2408 10192 4.018870 TCCTGGACCAATTGCTATGTACAA 60.019 41.667 0.00 0.00 0.00 2.41
2409 10193 3.521531 TCCTGGACCAATTGCTATGTACA 59.478 43.478 0.00 0.00 0.00 2.90
2410 10194 4.150897 TCCTGGACCAATTGCTATGTAC 57.849 45.455 0.00 0.00 0.00 2.90
2411 10195 4.853468 TTCCTGGACCAATTGCTATGTA 57.147 40.909 0.00 0.00 0.00 2.29
2412 10196 3.737559 TTCCTGGACCAATTGCTATGT 57.262 42.857 0.00 0.00 0.00 2.29
2413 10197 6.096705 TGTTATTTCCTGGACCAATTGCTATG 59.903 38.462 0.00 0.00 0.00 2.23
2414 10198 6.194235 TGTTATTTCCTGGACCAATTGCTAT 58.806 36.000 0.00 0.00 0.00 2.97
2415 10199 5.575157 TGTTATTTCCTGGACCAATTGCTA 58.425 37.500 0.00 0.00 0.00 3.49
2416 10200 4.415596 TGTTATTTCCTGGACCAATTGCT 58.584 39.130 0.00 0.00 0.00 3.91
2417 10201 4.799564 TGTTATTTCCTGGACCAATTGC 57.200 40.909 0.00 0.00 0.00 3.56
2418 10202 6.650390 CCTTTTGTTATTTCCTGGACCAATTG 59.350 38.462 0.00 0.00 0.00 2.32
2419 10203 6.744056 GCCTTTTGTTATTTCCTGGACCAATT 60.744 38.462 0.00 0.00 0.00 2.32
2420 10204 5.279960 GCCTTTTGTTATTTCCTGGACCAAT 60.280 40.000 0.00 0.00 0.00 3.16
2421 10205 4.039852 GCCTTTTGTTATTTCCTGGACCAA 59.960 41.667 0.00 0.00 0.00 3.67
2422 10206 3.576550 GCCTTTTGTTATTTCCTGGACCA 59.423 43.478 0.00 0.00 0.00 4.02
2423 10207 3.832490 AGCCTTTTGTTATTTCCTGGACC 59.168 43.478 0.00 0.00 0.00 4.46
2424 10208 5.010617 TGAAGCCTTTTGTTATTTCCTGGAC 59.989 40.000 0.00 0.00 0.00 4.02
2425 10209 5.144100 TGAAGCCTTTTGTTATTTCCTGGA 58.856 37.500 0.00 0.00 0.00 3.86
2426 10210 5.011023 ACTGAAGCCTTTTGTTATTTCCTGG 59.989 40.000 0.00 0.00 0.00 4.45
2427 10211 6.089249 ACTGAAGCCTTTTGTTATTTCCTG 57.911 37.500 0.00 0.00 0.00 3.86
2428 10212 5.243954 GGACTGAAGCCTTTTGTTATTTCCT 59.756 40.000 0.00 0.00 0.00 3.36
2429 10213 5.010617 TGGACTGAAGCCTTTTGTTATTTCC 59.989 40.000 0.00 0.00 0.00 3.13
2430 10214 6.084326 TGGACTGAAGCCTTTTGTTATTTC 57.916 37.500 0.00 0.00 0.00 2.17
2431 10215 6.478512 TTGGACTGAAGCCTTTTGTTATTT 57.521 33.333 0.00 0.00 0.00 1.40
2432 10216 6.478512 TTTGGACTGAAGCCTTTTGTTATT 57.521 33.333 0.00 0.00 0.00 1.40
2433 10217 6.478512 TTTTGGACTGAAGCCTTTTGTTAT 57.521 33.333 0.00 0.00 0.00 1.89
2434 10218 5.681179 GCTTTTGGACTGAAGCCTTTTGTTA 60.681 40.000 0.00 0.00 41.78 2.41
2435 10219 4.758688 CTTTTGGACTGAAGCCTTTTGTT 58.241 39.130 0.00 0.00 0.00 2.83
2436 10220 3.430790 GCTTTTGGACTGAAGCCTTTTGT 60.431 43.478 0.00 0.00 41.78 2.83
2437 10221 3.126073 GCTTTTGGACTGAAGCCTTTTG 58.874 45.455 0.00 0.00 41.78 2.44
2438 10222 2.765699 TGCTTTTGGACTGAAGCCTTTT 59.234 40.909 5.72 0.00 45.84 2.27
2439 10223 2.387757 TGCTTTTGGACTGAAGCCTTT 58.612 42.857 5.72 0.00 45.84 3.11
2440 10224 2.071778 TGCTTTTGGACTGAAGCCTT 57.928 45.000 5.72 0.00 45.84 4.35
2441 10225 1.959282 CTTGCTTTTGGACTGAAGCCT 59.041 47.619 5.72 0.00 45.84 4.58
2442 10226 1.603931 GCTTGCTTTTGGACTGAAGCC 60.604 52.381 5.72 0.00 45.84 4.35
2443 10227 1.603931 GGCTTGCTTTTGGACTGAAGC 60.604 52.381 0.00 0.00 46.42 3.86
2444 10228 1.682854 TGGCTTGCTTTTGGACTGAAG 59.317 47.619 0.00 0.00 0.00 3.02
2445 10229 1.774110 TGGCTTGCTTTTGGACTGAA 58.226 45.000 0.00 0.00 0.00 3.02
2446 10230 1.999648 ATGGCTTGCTTTTGGACTGA 58.000 45.000 0.00 0.00 0.00 3.41
2447 10231 4.082081 TCAATATGGCTTGCTTTTGGACTG 60.082 41.667 0.00 0.00 0.00 3.51
2448 10232 4.088634 TCAATATGGCTTGCTTTTGGACT 58.911 39.130 0.00 0.00 0.00 3.85
2449 10233 4.454728 TCAATATGGCTTGCTTTTGGAC 57.545 40.909 0.00 0.00 0.00 4.02
2450 10234 4.141892 CCATCAATATGGCTTGCTTTTGGA 60.142 41.667 0.00 0.00 46.17 3.53
2451 10235 4.124238 CCATCAATATGGCTTGCTTTTGG 58.876 43.478 0.00 0.00 46.17 3.28
2463 10247 5.456548 TTACCAATGCTGCCATCAATATG 57.543 39.130 0.00 0.00 0.00 1.78
2464 10248 4.021719 GCTTACCAATGCTGCCATCAATAT 60.022 41.667 0.00 0.00 0.00 1.28
2465 10249 3.318839 GCTTACCAATGCTGCCATCAATA 59.681 43.478 0.00 0.00 0.00 1.90
2466 10250 2.101917 GCTTACCAATGCTGCCATCAAT 59.898 45.455 0.00 0.00 0.00 2.57
2467 10251 1.477700 GCTTACCAATGCTGCCATCAA 59.522 47.619 0.00 0.00 0.00 2.57
2468 10252 1.105457 GCTTACCAATGCTGCCATCA 58.895 50.000 0.00 0.00 0.00 3.07
2469 10253 1.336125 GAGCTTACCAATGCTGCCATC 59.664 52.381 0.00 0.00 39.91 3.51
2470 10254 1.341285 TGAGCTTACCAATGCTGCCAT 60.341 47.619 0.00 0.00 39.91 4.40
2471 10255 0.038021 TGAGCTTACCAATGCTGCCA 59.962 50.000 0.00 0.00 39.91 4.92
2472 10256 1.176527 TTGAGCTTACCAATGCTGCC 58.823 50.000 0.00 0.00 39.91 4.85
2473 10257 2.424601 TGATTGAGCTTACCAATGCTGC 59.575 45.455 4.00 0.00 39.91 5.25
2474 10258 3.943381 TCTGATTGAGCTTACCAATGCTG 59.057 43.478 4.00 2.04 39.91 4.41
2475 10259 3.944015 GTCTGATTGAGCTTACCAATGCT 59.056 43.478 4.00 0.00 42.82 3.79
2476 10260 3.691118 TGTCTGATTGAGCTTACCAATGC 59.309 43.478 4.00 0.00 34.67 3.56
2477 10261 4.696877 TGTGTCTGATTGAGCTTACCAATG 59.303 41.667 4.00 0.00 34.67 2.82
2478 10262 4.910195 TGTGTCTGATTGAGCTTACCAAT 58.090 39.130 0.00 0.00 36.98 3.16
2479 10263 4.350368 TGTGTCTGATTGAGCTTACCAA 57.650 40.909 0.00 0.00 0.00 3.67
2480 10264 4.350368 TTGTGTCTGATTGAGCTTACCA 57.650 40.909 0.00 0.00 0.00 3.25
2481 10265 5.886960 ATTTGTGTCTGATTGAGCTTACC 57.113 39.130 0.00 0.00 0.00 2.85
2482 10266 7.912250 CCATTATTTGTGTCTGATTGAGCTTAC 59.088 37.037 0.00 0.00 0.00 2.34
2483 10267 7.828717 TCCATTATTTGTGTCTGATTGAGCTTA 59.171 33.333 0.00 0.00 0.00 3.09
2484 10268 6.660521 TCCATTATTTGTGTCTGATTGAGCTT 59.339 34.615 0.00 0.00 0.00 3.74
2485 10269 6.182627 TCCATTATTTGTGTCTGATTGAGCT 58.817 36.000 0.00 0.00 0.00 4.09
2486 10270 6.441093 TCCATTATTTGTGTCTGATTGAGC 57.559 37.500 0.00 0.00 0.00 4.26
2487 10271 7.350467 CGATCCATTATTTGTGTCTGATTGAG 58.650 38.462 0.00 0.00 0.00 3.02
2488 10272 6.260714 CCGATCCATTATTTGTGTCTGATTGA 59.739 38.462 0.00 0.00 0.00 2.57
2489 10273 6.432936 CCGATCCATTATTTGTGTCTGATTG 58.567 40.000 0.00 0.00 0.00 2.67
2490 10274 5.009010 GCCGATCCATTATTTGTGTCTGATT 59.991 40.000 0.00 0.00 0.00 2.57
2491 10275 4.516698 GCCGATCCATTATTTGTGTCTGAT 59.483 41.667 0.00 0.00 0.00 2.90
2492 10276 3.876914 GCCGATCCATTATTTGTGTCTGA 59.123 43.478 0.00 0.00 0.00 3.27
2493 10277 3.627123 TGCCGATCCATTATTTGTGTCTG 59.373 43.478 0.00 0.00 0.00 3.51
2494 10278 3.884895 TGCCGATCCATTATTTGTGTCT 58.115 40.909 0.00 0.00 0.00 3.41
2495 10279 4.630894 TTGCCGATCCATTATTTGTGTC 57.369 40.909 0.00 0.00 0.00 3.67
2496 10280 4.261155 CGATTGCCGATCCATTATTTGTGT 60.261 41.667 0.00 0.00 41.76 3.72
2497 10281 4.024133 TCGATTGCCGATCCATTATTTGTG 60.024 41.667 0.00 0.00 43.23 3.33
2498 10282 4.133820 TCGATTGCCGATCCATTATTTGT 58.866 39.130 0.00 0.00 43.23 2.83
2499 10283 4.747540 TCGATTGCCGATCCATTATTTG 57.252 40.909 0.00 0.00 43.23 2.32
2510 10294 1.971505 ATGCTCCCTTCGATTGCCGA 61.972 55.000 0.00 0.00 46.94 5.54
2511 10295 1.502163 GATGCTCCCTTCGATTGCCG 61.502 60.000 0.00 0.00 40.25 5.69
2512 10296 0.464373 TGATGCTCCCTTCGATTGCC 60.464 55.000 0.00 0.00 0.00 4.52
2513 10297 1.382522 TTGATGCTCCCTTCGATTGC 58.617 50.000 0.00 0.00 0.00 3.56
2514 10298 3.181493 CCTTTTGATGCTCCCTTCGATTG 60.181 47.826 0.00 0.00 0.00 2.67
2515 10299 3.019564 CCTTTTGATGCTCCCTTCGATT 58.980 45.455 0.00 0.00 0.00 3.34
2516 10300 2.648059 CCTTTTGATGCTCCCTTCGAT 58.352 47.619 0.00 0.00 0.00 3.59
2517 10301 1.950484 GCCTTTTGATGCTCCCTTCGA 60.950 52.381 0.00 0.00 0.00 3.71
2518 10302 0.453390 GCCTTTTGATGCTCCCTTCG 59.547 55.000 0.00 0.00 0.00 3.79
2519 10303 1.747924 GAGCCTTTTGATGCTCCCTTC 59.252 52.381 0.08 0.00 46.50 3.46
2520 10304 1.844687 GAGCCTTTTGATGCTCCCTT 58.155 50.000 0.08 0.00 46.50 3.95
2521 10305 3.584947 GAGCCTTTTGATGCTCCCT 57.415 52.632 0.08 0.00 46.50 4.20
2525 10309 4.612264 ATTTGTTGAGCCTTTTGATGCT 57.388 36.364 0.00 0.00 41.42 3.79
2526 10310 5.695816 TGTAATTTGTTGAGCCTTTTGATGC 59.304 36.000 0.00 0.00 0.00 3.91
2527 10311 6.700960 TGTGTAATTTGTTGAGCCTTTTGATG 59.299 34.615 0.00 0.00 0.00 3.07
2528 10312 6.815089 TGTGTAATTTGTTGAGCCTTTTGAT 58.185 32.000 0.00 0.00 0.00 2.57
2529 10313 6.214191 TGTGTAATTTGTTGAGCCTTTTGA 57.786 33.333 0.00 0.00 0.00 2.69
2530 10314 6.312426 TGTTGTGTAATTTGTTGAGCCTTTTG 59.688 34.615 0.00 0.00 0.00 2.44
2531 10315 6.402222 TGTTGTGTAATTTGTTGAGCCTTTT 58.598 32.000 0.00 0.00 0.00 2.27
2532 10316 5.971763 TGTTGTGTAATTTGTTGAGCCTTT 58.028 33.333 0.00 0.00 0.00 3.11
2533 10317 5.590530 TGTTGTGTAATTTGTTGAGCCTT 57.409 34.783 0.00 0.00 0.00 4.35
2534 10318 5.509501 CCATGTTGTGTAATTTGTTGAGCCT 60.510 40.000 0.00 0.00 0.00 4.58
2535 10319 4.685628 CCATGTTGTGTAATTTGTTGAGCC 59.314 41.667 0.00 0.00 0.00 4.70
2536 10320 4.150451 GCCATGTTGTGTAATTTGTTGAGC 59.850 41.667 0.00 0.00 0.00 4.26
2537 10321 4.685628 GGCCATGTTGTGTAATTTGTTGAG 59.314 41.667 0.00 0.00 0.00 3.02
2538 10322 4.100035 TGGCCATGTTGTGTAATTTGTTGA 59.900 37.500 0.00 0.00 0.00 3.18
2539 10323 4.375272 TGGCCATGTTGTGTAATTTGTTG 58.625 39.130 0.00 0.00 0.00 3.33
2540 10324 4.630111 CTGGCCATGTTGTGTAATTTGTT 58.370 39.130 5.51 0.00 0.00 2.83
2541 10325 3.554752 GCTGGCCATGTTGTGTAATTTGT 60.555 43.478 5.51 0.00 0.00 2.83
2542 10326 2.995258 GCTGGCCATGTTGTGTAATTTG 59.005 45.455 5.51 0.00 0.00 2.32
2543 10327 2.899256 AGCTGGCCATGTTGTGTAATTT 59.101 40.909 5.51 0.00 0.00 1.82
2544 10328 2.528564 AGCTGGCCATGTTGTGTAATT 58.471 42.857 5.51 0.00 0.00 1.40
2545 10329 2.220653 AGCTGGCCATGTTGTGTAAT 57.779 45.000 5.51 0.00 0.00 1.89
2546 10330 2.817258 GTTAGCTGGCCATGTTGTGTAA 59.183 45.455 5.51 0.00 0.00 2.41
2547 10331 2.039746 AGTTAGCTGGCCATGTTGTGTA 59.960 45.455 5.51 0.00 0.00 2.90
2548 10332 1.202927 AGTTAGCTGGCCATGTTGTGT 60.203 47.619 5.51 0.00 0.00 3.72
2549 10333 1.538047 AGTTAGCTGGCCATGTTGTG 58.462 50.000 5.51 0.00 0.00 3.33
2550 10334 3.652057 ATAGTTAGCTGGCCATGTTGT 57.348 42.857 5.51 0.00 0.00 3.32
2551 10335 4.989279 AAATAGTTAGCTGGCCATGTTG 57.011 40.909 5.51 0.00 0.00 3.33
2552 10336 6.423182 TCTTAAATAGTTAGCTGGCCATGTT 58.577 36.000 5.51 0.79 0.00 2.71
2553 10337 6.001449 TCTTAAATAGTTAGCTGGCCATGT 57.999 37.500 5.51 0.00 0.00 3.21
2554 10338 6.942532 TTCTTAAATAGTTAGCTGGCCATG 57.057 37.500 5.51 1.08 0.00 3.66
2555 10339 6.889722 TGTTTCTTAAATAGTTAGCTGGCCAT 59.110 34.615 5.51 0.00 0.00 4.40
2556 10340 6.242396 TGTTTCTTAAATAGTTAGCTGGCCA 58.758 36.000 4.71 4.71 0.00 5.36
2557 10341 6.374613 ACTGTTTCTTAAATAGTTAGCTGGCC 59.625 38.462 0.00 0.00 39.41 5.36
2558 10342 7.379098 ACTGTTTCTTAAATAGTTAGCTGGC 57.621 36.000 0.00 0.00 39.41 4.85
2559 10343 7.674240 GCGACTGTTTCTTAAATAGTTAGCTGG 60.674 40.741 15.93 2.87 41.98 4.85
2560 10344 7.174082 GCGACTGTTTCTTAAATAGTTAGCTG 58.826 38.462 15.93 4.33 41.98 4.24
2561 10345 6.313164 GGCGACTGTTTCTTAAATAGTTAGCT 59.687 38.462 19.27 0.00 41.98 3.32
2562 10346 6.091713 TGGCGACTGTTTCTTAAATAGTTAGC 59.908 38.462 15.38 15.38 41.98 3.09
2563 10347 7.591006 TGGCGACTGTTTCTTAAATAGTTAG 57.409 36.000 3.74 3.48 41.98 2.34
2564 10348 7.441760 TGTTGGCGACTGTTTCTTAAATAGTTA 59.558 33.333 6.41 0.00 41.98 2.24
2565 10349 6.261381 TGTTGGCGACTGTTTCTTAAATAGTT 59.739 34.615 6.41 0.00 41.98 2.24
2566 10350 5.761234 TGTTGGCGACTGTTTCTTAAATAGT 59.239 36.000 6.41 1.98 44.16 2.12
2567 10351 6.236017 TGTTGGCGACTGTTTCTTAAATAG 57.764 37.500 6.41 0.00 35.92 1.73
2568 10352 6.621316 TTGTTGGCGACTGTTTCTTAAATA 57.379 33.333 6.41 0.00 0.00 1.40
2569 10353 5.508200 TTGTTGGCGACTGTTTCTTAAAT 57.492 34.783 6.41 0.00 0.00 1.40
2570 10354 4.966965 TTGTTGGCGACTGTTTCTTAAA 57.033 36.364 6.41 0.00 0.00 1.52
2571 10355 4.966965 TTTGTTGGCGACTGTTTCTTAA 57.033 36.364 6.41 0.00 0.00 1.85
2572 10356 6.811253 ATATTTGTTGGCGACTGTTTCTTA 57.189 33.333 6.41 0.00 0.00 2.10
2573 10357 5.705609 ATATTTGTTGGCGACTGTTTCTT 57.294 34.783 6.41 0.00 0.00 2.52
2574 10358 7.769044 ACTATATATTTGTTGGCGACTGTTTCT 59.231 33.333 6.41 0.00 0.00 2.52
2575 10359 7.916552 ACTATATATTTGTTGGCGACTGTTTC 58.083 34.615 6.41 0.00 0.00 2.78
2576 10360 7.859325 ACTATATATTTGTTGGCGACTGTTT 57.141 32.000 6.41 0.00 0.00 2.83
2577 10361 7.859325 AACTATATATTTGTTGGCGACTGTT 57.141 32.000 6.41 0.00 0.00 3.16
2578 10362 8.951787 TTAACTATATATTTGTTGGCGACTGT 57.048 30.769 6.41 0.00 0.00 3.55
2579 10363 9.646336 GTTTAACTATATATTTGTTGGCGACTG 57.354 33.333 6.41 0.00 0.00 3.51
2580 10364 9.386010 TGTTTAACTATATATTTGTTGGCGACT 57.614 29.630 6.41 0.00 0.00 4.18
2581 10365 9.991388 TTGTTTAACTATATATTTGTTGGCGAC 57.009 29.630 0.00 0.00 0.00 5.19
2582 10366 9.991388 GTTGTTTAACTATATATTTGTTGGCGA 57.009 29.630 11.63 0.00 33.94 5.54
2583 10367 9.776158 TGTTGTTTAACTATATATTTGTTGGCG 57.224 29.630 11.63 0.00 37.68 5.69
2592 10376 9.268268 CCGTGTGGATGTTGTTTAACTATATAT 57.732 33.333 0.00 0.00 36.03 0.86
2593 10377 8.476447 TCCGTGTGGATGTTGTTTAACTATATA 58.524 33.333 0.00 0.00 40.17 0.86
2594 10378 7.332557 TCCGTGTGGATGTTGTTTAACTATAT 58.667 34.615 0.00 0.00 40.17 0.86
2595 10379 6.699366 TCCGTGTGGATGTTGTTTAACTATA 58.301 36.000 0.00 0.00 40.17 1.31
2596 10380 5.553123 TCCGTGTGGATGTTGTTTAACTAT 58.447 37.500 0.00 0.00 40.17 2.12
2597 10381 4.958509 TCCGTGTGGATGTTGTTTAACTA 58.041 39.130 0.00 0.00 40.17 2.24
2598 10382 3.811083 TCCGTGTGGATGTTGTTTAACT 58.189 40.909 0.00 0.00 40.17 2.24
2599 10383 3.562557 ACTCCGTGTGGATGTTGTTTAAC 59.437 43.478 0.00 0.00 45.33 2.01
2600 10384 3.811083 ACTCCGTGTGGATGTTGTTTAA 58.189 40.909 0.00 0.00 45.33 1.52
2601 10385 3.478857 ACTCCGTGTGGATGTTGTTTA 57.521 42.857 0.00 0.00 45.33 2.01
2602 10386 2.341846 ACTCCGTGTGGATGTTGTTT 57.658 45.000 0.00 0.00 45.33 2.83
2603 10387 2.631062 TCTACTCCGTGTGGATGTTGTT 59.369 45.455 0.00 0.00 45.33 2.83
2604 10388 2.244695 TCTACTCCGTGTGGATGTTGT 58.755 47.619 0.00 0.00 45.33 3.32
2605 10389 3.313012 TTCTACTCCGTGTGGATGTTG 57.687 47.619 0.00 0.00 45.33 3.33
2606 10390 4.553330 ATTTCTACTCCGTGTGGATGTT 57.447 40.909 0.00 0.00 45.33 2.71
2607 10391 4.553330 AATTTCTACTCCGTGTGGATGT 57.447 40.909 0.00 0.00 45.33 3.06
2608 10392 6.049149 ACATAATTTCTACTCCGTGTGGATG 58.951 40.000 0.00 0.00 45.33 3.51
2609 10393 6.235231 ACATAATTTCTACTCCGTGTGGAT 57.765 37.500 0.00 0.00 45.33 3.41
2610 10394 5.670792 ACATAATTTCTACTCCGTGTGGA 57.329 39.130 0.00 0.00 43.88 4.02
2611 10395 6.570692 ACTACATAATTTCTACTCCGTGTGG 58.429 40.000 0.00 0.00 0.00 4.17
2612 10396 6.414109 CGACTACATAATTTCTACTCCGTGTG 59.586 42.308 0.00 0.00 0.00 3.82
2613 10397 6.094603 ACGACTACATAATTTCTACTCCGTGT 59.905 38.462 0.00 0.00 0.00 4.49
2614 10398 6.493116 ACGACTACATAATTTCTACTCCGTG 58.507 40.000 0.00 0.00 0.00 4.94
2615 10399 6.317140 TGACGACTACATAATTTCTACTCCGT 59.683 38.462 0.00 0.00 0.00 4.69
2616 10400 6.722301 TGACGACTACATAATTTCTACTCCG 58.278 40.000 0.00 0.00 0.00 4.63
2617 10401 9.530633 AATTGACGACTACATAATTTCTACTCC 57.469 33.333 0.00 0.00 0.00 3.85
2619 10403 8.818057 GCAATTGACGACTACATAATTTCTACT 58.182 33.333 10.34 0.00 0.00 2.57
2620 10404 7.787935 CGCAATTGACGACTACATAATTTCTAC 59.212 37.037 10.34 0.00 0.00 2.59
2621 10405 7.516155 GCGCAATTGACGACTACATAATTTCTA 60.516 37.037 21.12 0.00 0.00 2.10
2622 10406 6.705782 CGCAATTGACGACTACATAATTTCT 58.294 36.000 10.34 0.00 0.00 2.52
2623 10407 5.392585 GCGCAATTGACGACTACATAATTTC 59.607 40.000 21.12 1.14 0.00 2.17
2624 10408 5.163804 TGCGCAATTGACGACTACATAATTT 60.164 36.000 21.12 0.00 0.00 1.82
2625 10409 4.331443 TGCGCAATTGACGACTACATAATT 59.669 37.500 21.12 0.00 0.00 1.40
2626 10410 3.868661 TGCGCAATTGACGACTACATAAT 59.131 39.130 21.12 0.00 0.00 1.28
2627 10411 3.254892 TGCGCAATTGACGACTACATAA 58.745 40.909 21.12 0.00 0.00 1.90
2628 10412 2.882324 TGCGCAATTGACGACTACATA 58.118 42.857 21.12 0.00 0.00 2.29
2629 10413 1.720805 TGCGCAATTGACGACTACAT 58.279 45.000 21.12 0.00 0.00 2.29
2630 10414 1.720805 ATGCGCAATTGACGACTACA 58.279 45.000 17.11 12.17 0.00 2.74
2631 10415 2.806288 AATGCGCAATTGACGACTAC 57.194 45.000 17.11 8.01 0.00 2.73
2632 10416 2.280445 CGTAATGCGCAATTGACGACTA 59.720 45.455 23.73 10.07 32.06 2.59
2633 10417 1.060553 CGTAATGCGCAATTGACGACT 59.939 47.619 23.73 0.00 32.06 4.18
2634 10418 1.201877 ACGTAATGCGCAATTGACGAC 60.202 47.619 30.36 12.86 46.11 4.34
2635 10419 1.072391 ACGTAATGCGCAATTGACGA 58.928 45.000 30.36 2.59 46.11 4.20
2636 10420 2.028763 AGTACGTAATGCGCAATTGACG 59.971 45.455 25.29 25.29 46.11 4.35
2637 10421 3.342269 CAGTACGTAATGCGCAATTGAC 58.658 45.455 17.11 9.27 46.11 3.18
2638 10422 2.222931 GCAGTACGTAATGCGCAATTGA 60.223 45.455 29.26 0.00 46.11 2.57
2639 10423 2.101125 GCAGTACGTAATGCGCAATTG 58.899 47.619 29.26 4.72 46.11 2.32
2640 10424 2.452006 GCAGTACGTAATGCGCAATT 57.548 45.000 29.26 12.19 46.11 2.32
2646 10430 2.223377 GCAATAGGGCAGTACGTAATGC 59.777 50.000 33.44 33.44 45.60 3.56
2647 10431 3.462982 TGCAATAGGGCAGTACGTAATG 58.537 45.455 18.22 18.22 39.25 1.90
2648 10432 3.830744 TGCAATAGGGCAGTACGTAAT 57.169 42.857 0.00 0.00 39.25 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.