Multiple sequence alignment - TraesCS2A01G049500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G049500 chr2A 100.000 7077 0 0 1 7077 19085807 19078731 0.000000e+00 13069.0
1 TraesCS2A01G049500 chr2A 83.090 343 44 11 6718 7050 19051973 19051635 4.150000e-77 300.0
2 TraesCS2A01G049500 chr2A 98.980 98 1 0 1 98 19090864 19090767 7.300000e-40 176.0
3 TraesCS2A01G049500 chr2A 98.980 98 1 0 1 98 19096359 19096262 7.300000e-40 176.0
4 TraesCS2A01G049500 chr2D 94.404 3985 148 27 1089 5011 17805719 17801748 0.000000e+00 6054.0
5 TraesCS2A01G049500 chr2D 93.570 1213 52 9 5014 6202 17799960 17798750 0.000000e+00 1784.0
6 TraesCS2A01G049500 chr2D 93.613 548 10 9 259 802 17806243 17805717 0.000000e+00 795.0
7 TraesCS2A01G049500 chr2D 92.812 473 27 6 6324 6789 17798376 17797904 0.000000e+00 678.0
8 TraesCS2A01G049500 chr2D 89.641 251 16 7 6833 7077 17797913 17797667 1.920000e-80 311.0
9 TraesCS2A01G049500 chr2D 81.897 348 49 8 6718 7057 17771048 17770707 1.500000e-71 281.0
10 TraesCS2A01G049500 chr2B 91.472 1794 92 14 1275 3029 29173537 29175308 0.000000e+00 2409.0
11 TraesCS2A01G049500 chr2B 92.081 1326 76 13 3701 5009 29175307 29176620 0.000000e+00 1840.0
12 TraesCS2A01G049500 chr2B 91.563 1209 61 5 5014 6205 29178427 29179611 0.000000e+00 1629.0
13 TraesCS2A01G049500 chr2B 91.691 698 40 11 6397 7077 29179807 29180503 0.000000e+00 952.0
14 TraesCS2A01G049500 chr2B 92.279 272 9 2 845 1104 29173096 29173367 6.700000e-100 375.0
15 TraesCS2A01G049500 chr2B 82.877 292 35 11 6718 6998 29222034 29222321 1.520000e-61 248.0
16 TraesCS2A01G049500 chr2B 88.710 124 12 2 5821 5943 29502568 29502690 4.420000e-32 150.0
17 TraesCS2A01G049500 chr2B 86.567 134 7 5 6232 6359 29179677 29179805 3.440000e-28 137.0
18 TraesCS2A01G049500 chr6D 82.252 1110 164 23 1318 2419 24460199 24459115 0.000000e+00 928.0
19 TraesCS2A01G049500 chr6D 84.741 367 41 8 5729 6090 24456110 24455754 3.140000e-93 353.0
20 TraesCS2A01G049500 chr6D 85.852 311 38 6 4596 4901 24457681 24457372 6.850000e-85 326.0
21 TraesCS2A01G049500 chr6D 94.253 87 5 0 1019 1105 24460869 24460783 4.450000e-27 134.0
22 TraesCS2A01G049500 chr6D 94.805 77 3 1 94 170 283183655 283183580 1.250000e-22 119.0
23 TraesCS2A01G049500 chr4D 80.447 1074 186 23 1348 2410 448407103 448408163 0.000000e+00 798.0
24 TraesCS2A01G049500 chr4D 80.168 1074 189 23 1348 2410 390869619 390868559 0.000000e+00 782.0
25 TraesCS2A01G049500 chr4D 80.000 1075 189 25 1348 2410 448493131 448494191 0.000000e+00 771.0
26 TraesCS2A01G049500 chr4D 86.533 349 44 2 5737 6085 390865441 390865096 1.440000e-101 381.0
27 TraesCS2A01G049500 chr4D 85.960 349 46 2 5737 6085 448422551 448422896 3.120000e-98 370.0
28 TraesCS2A01G049500 chr4D 83.954 349 41 10 5737 6085 448497314 448497647 3.190000e-83 320.0
29 TraesCS2A01G049500 chr6B 83.558 371 42 13 5719 6086 39803824 39803470 5.290000e-86 329.0
30 TraesCS2A01G049500 chr6B 79.858 422 75 8 4475 4888 39805537 39805118 4.150000e-77 300.0
31 TraesCS2A01G049500 chr6B 79.545 264 44 8 3761 4015 39806375 39806113 5.640000e-41 180.0
32 TraesCS2A01G049500 chrUn 94.805 77 3 1 94 170 233528658 233528733 1.250000e-22 119.0
33 TraesCS2A01G049500 chrUn 94.805 77 3 1 94 170 257941240 257941165 1.250000e-22 119.0
34 TraesCS2A01G049500 chrUn 94.805 77 3 1 94 170 412432591 412432516 1.250000e-22 119.0
35 TraesCS2A01G049500 chrUn 94.805 77 3 1 94 170 442350643 442350568 1.250000e-22 119.0
36 TraesCS2A01G049500 chrUn 94.805 77 3 1 94 170 452718096 452718171 1.250000e-22 119.0
37 TraesCS2A01G049500 chrUn 77.922 154 34 0 2228 2381 466718156 466718309 5.840000e-16 97.1
38 TraesCS2A01G049500 chrUn 77.273 154 35 0 2228 2381 15845601 15845754 2.720000e-14 91.6
39 TraesCS2A01G049500 chr7D 94.805 77 3 1 94 170 307078619 307078544 1.250000e-22 119.0
40 TraesCS2A01G049500 chr3D 94.805 77 3 1 94 170 145419984 145419909 1.250000e-22 119.0
41 TraesCS2A01G049500 chr1A 94.805 77 3 1 94 170 94629545 94629470 1.250000e-22 119.0
42 TraesCS2A01G049500 chr3B 91.667 84 5 1 731 812 756250513 756250596 1.610000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G049500 chr2A 19078731 19085807 7076 True 13069.000000 13069 100.000000 1 7077 1 chr2A.!!$R2 7076
1 TraesCS2A01G049500 chr2D 17797667 17806243 8576 True 1924.400000 6054 92.808000 259 7077 5 chr2D.!!$R2 6818
2 TraesCS2A01G049500 chr2B 29173096 29180503 7407 False 1223.666667 2409 90.942167 845 7077 6 chr2B.!!$F3 6232
3 TraesCS2A01G049500 chr6D 24455754 24460869 5115 True 435.250000 928 86.774500 1019 6090 4 chr6D.!!$R2 5071
4 TraesCS2A01G049500 chr4D 448407103 448408163 1060 False 798.000000 798 80.447000 1348 2410 1 chr4D.!!$F1 1062
5 TraesCS2A01G049500 chr4D 390865096 390869619 4523 True 581.500000 782 83.350500 1348 6085 2 chr4D.!!$R1 4737
6 TraesCS2A01G049500 chr4D 448493131 448497647 4516 False 545.500000 771 81.977000 1348 6085 2 chr4D.!!$F3 4737
7 TraesCS2A01G049500 chr6B 39803470 39806375 2905 True 269.666667 329 80.987000 3761 6086 3 chr6B.!!$R1 2325

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
805 807 0.104120 CCATCCATCGTCCGCAGTAA 59.896 55.000 0.00 0.0 0.00 2.24 F
842 844 0.108804 CGTGTCTTCTATGGTGGCGT 60.109 55.000 0.00 0.0 0.00 5.68 F
1169 1226 1.080974 CCTTACTTCGTGTCGCCGT 60.081 57.895 0.00 0.0 0.00 5.68 F
2783 3306 0.327591 CCTCTTTTGCTGCCTCTCCT 59.672 55.000 0.00 0.0 0.00 3.69 F
3318 3864 0.823356 AAGCAACGTCCTGCCATTGT 60.823 50.000 8.57 0.0 43.73 2.71 F
4187 5898 1.069513 TGTCGACGTGGGACAAGAAAT 59.930 47.619 14.69 0.0 44.16 2.17 F
5500 9423 0.676466 GATGACCACCATGCGACCAA 60.676 55.000 0.00 0.0 35.17 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2523 3045 0.750850 TATCACCTAACGGCCTCTGC 59.249 55.000 0.00 0.0 0.00 4.26 R
2783 3306 1.227249 TGAAAAAGGAGGTGGGGTGA 58.773 50.000 0.00 0.0 0.00 4.02 R
2905 3430 1.448985 TAGCGGCCAACTGAATCAAC 58.551 50.000 2.24 0.0 0.00 3.18 R
4619 6533 2.240160 TGGCCACGTGGATTACCTAAAT 59.760 45.455 38.30 0.0 37.39 1.40 R
5313 9223 0.324738 TGGTGTTGGGAAAGGCACAA 60.325 50.000 0.00 0.0 37.63 3.33 R
5620 9574 1.702182 TGCCACACATGTTGGTTCAT 58.298 45.000 20.87 0.0 0.00 2.57 R
7043 11294 1.268352 GCACGGCCACTATTGTTTTCA 59.732 47.619 2.24 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.004555 ACATCTACTGTATTGGAGTTTCACA 57.995 36.000 0.00 0.00 35.91 3.58
26 27 7.624549 ACATCTACTGTATTGGAGTTTCACAT 58.375 34.615 0.00 0.00 35.91 3.21
27 28 8.758829 ACATCTACTGTATTGGAGTTTCACATA 58.241 33.333 0.00 0.00 35.91 2.29
28 29 9.770097 CATCTACTGTATTGGAGTTTCACATAT 57.230 33.333 0.00 0.00 0.00 1.78
35 36 9.542462 TGTATTGGAGTTTCACATATTAGTAGC 57.458 33.333 0.00 0.00 0.00 3.58
36 37 9.765795 GTATTGGAGTTTCACATATTAGTAGCT 57.234 33.333 0.00 0.00 0.00 3.32
37 38 8.668510 ATTGGAGTTTCACATATTAGTAGCTG 57.331 34.615 0.00 0.00 0.00 4.24
38 39 6.049149 TGGAGTTTCACATATTAGTAGCTGC 58.951 40.000 0.00 0.00 0.00 5.25
39 40 6.127054 TGGAGTTTCACATATTAGTAGCTGCT 60.127 38.462 9.94 9.94 0.00 4.24
40 41 6.201806 GGAGTTTCACATATTAGTAGCTGCTG 59.798 42.308 15.31 0.16 0.00 4.41
41 42 6.644347 AGTTTCACATATTAGTAGCTGCTGT 58.356 36.000 15.31 5.71 0.00 4.40
42 43 6.758886 AGTTTCACATATTAGTAGCTGCTGTC 59.241 38.462 15.31 5.50 0.00 3.51
43 44 4.860072 TCACATATTAGTAGCTGCTGTCG 58.140 43.478 15.31 1.14 0.00 4.35
44 45 4.338400 TCACATATTAGTAGCTGCTGTCGT 59.662 41.667 15.31 1.77 0.00 4.34
45 46 4.677378 CACATATTAGTAGCTGCTGTCGTC 59.323 45.833 15.31 0.00 0.00 4.20
46 47 4.338400 ACATATTAGTAGCTGCTGTCGTCA 59.662 41.667 15.31 0.00 0.00 4.35
47 48 5.010112 ACATATTAGTAGCTGCTGTCGTCAT 59.990 40.000 15.31 0.00 0.00 3.06
48 49 2.851805 TAGTAGCTGCTGTCGTCATG 57.148 50.000 15.31 0.00 0.00 3.07
49 50 0.891373 AGTAGCTGCTGTCGTCATGT 59.109 50.000 13.43 0.00 0.00 3.21
50 51 1.273606 AGTAGCTGCTGTCGTCATGTT 59.726 47.619 13.43 0.00 0.00 2.71
51 52 2.069273 GTAGCTGCTGTCGTCATGTTT 58.931 47.619 13.43 0.00 0.00 2.83
52 53 2.455674 AGCTGCTGTCGTCATGTTTA 57.544 45.000 0.00 0.00 0.00 2.01
53 54 2.766313 AGCTGCTGTCGTCATGTTTAA 58.234 42.857 0.00 0.00 0.00 1.52
54 55 3.338249 AGCTGCTGTCGTCATGTTTAAT 58.662 40.909 0.00 0.00 0.00 1.40
55 56 4.503910 AGCTGCTGTCGTCATGTTTAATA 58.496 39.130 0.00 0.00 0.00 0.98
56 57 5.118990 AGCTGCTGTCGTCATGTTTAATAT 58.881 37.500 0.00 0.00 0.00 1.28
57 58 5.007039 AGCTGCTGTCGTCATGTTTAATATG 59.993 40.000 0.00 0.00 0.00 1.78
58 59 5.155509 TGCTGTCGTCATGTTTAATATGC 57.844 39.130 0.00 0.00 0.00 3.14
59 60 4.875536 TGCTGTCGTCATGTTTAATATGCT 59.124 37.500 0.00 0.00 0.00 3.79
60 61 5.200454 GCTGTCGTCATGTTTAATATGCTG 58.800 41.667 0.00 0.00 0.00 4.41
61 62 5.733226 TGTCGTCATGTTTAATATGCTGG 57.267 39.130 0.00 0.00 0.00 4.85
62 63 5.423886 TGTCGTCATGTTTAATATGCTGGA 58.576 37.500 0.00 0.00 0.00 3.86
63 64 5.877564 TGTCGTCATGTTTAATATGCTGGAA 59.122 36.000 0.00 0.00 0.00 3.53
64 65 6.542005 TGTCGTCATGTTTAATATGCTGGAAT 59.458 34.615 0.00 0.00 0.00 3.01
65 66 7.066887 TGTCGTCATGTTTAATATGCTGGAATT 59.933 33.333 0.00 0.00 0.00 2.17
66 67 8.556194 GTCGTCATGTTTAATATGCTGGAATTA 58.444 33.333 0.00 0.00 0.00 1.40
67 68 9.114952 TCGTCATGTTTAATATGCTGGAATTAA 57.885 29.630 0.00 0.00 0.00 1.40
68 69 9.897744 CGTCATGTTTAATATGCTGGAATTAAT 57.102 29.630 0.00 0.00 30.01 1.40
78 79 9.912634 AATATGCTGGAATTAATTATGGAAACG 57.087 29.630 0.00 0.00 0.00 3.60
79 80 7.581213 ATGCTGGAATTAATTATGGAAACGA 57.419 32.000 0.00 0.00 0.00 3.85
80 81 7.581213 TGCTGGAATTAATTATGGAAACGAT 57.419 32.000 0.00 0.00 0.00 3.73
81 82 7.424803 TGCTGGAATTAATTATGGAAACGATG 58.575 34.615 0.00 0.00 0.00 3.84
82 83 6.363357 GCTGGAATTAATTATGGAAACGATGC 59.637 38.462 0.00 0.00 0.00 3.91
83 84 6.744112 TGGAATTAATTATGGAAACGATGCC 58.256 36.000 0.00 0.00 0.00 4.40
84 85 6.549364 TGGAATTAATTATGGAAACGATGCCT 59.451 34.615 0.00 0.00 0.00 4.75
85 86 7.721842 TGGAATTAATTATGGAAACGATGCCTA 59.278 33.333 0.00 0.00 0.00 3.93
86 87 8.573035 GGAATTAATTATGGAAACGATGCCTAA 58.427 33.333 0.00 0.00 0.00 2.69
92 93 7.681939 TTATGGAAACGATGCCTAATTATCC 57.318 36.000 0.00 0.00 0.00 2.59
93 94 5.042463 TGGAAACGATGCCTAATTATCCA 57.958 39.130 0.00 0.00 32.33 3.41
94 95 5.441500 TGGAAACGATGCCTAATTATCCAA 58.558 37.500 0.00 0.00 31.87 3.53
95 96 5.298276 TGGAAACGATGCCTAATTATCCAAC 59.702 40.000 0.00 0.00 31.87 3.77
96 97 5.298276 GGAAACGATGCCTAATTATCCAACA 59.702 40.000 0.00 0.00 0.00 3.33
97 98 6.183360 GGAAACGATGCCTAATTATCCAACAA 60.183 38.462 0.00 0.00 0.00 2.83
98 99 5.751243 ACGATGCCTAATTATCCAACAAC 57.249 39.130 0.00 0.00 0.00 3.32
99 100 5.189928 ACGATGCCTAATTATCCAACAACA 58.810 37.500 0.00 0.00 0.00 3.33
100 101 5.296780 ACGATGCCTAATTATCCAACAACAG 59.703 40.000 0.00 0.00 0.00 3.16
101 102 5.527214 CGATGCCTAATTATCCAACAACAGA 59.473 40.000 0.00 0.00 0.00 3.41
102 103 6.038161 CGATGCCTAATTATCCAACAACAGAA 59.962 38.462 0.00 0.00 0.00 3.02
103 104 7.415095 CGATGCCTAATTATCCAACAACAGAAA 60.415 37.037 0.00 0.00 0.00 2.52
104 105 7.156876 TGCCTAATTATCCAACAACAGAAAG 57.843 36.000 0.00 0.00 0.00 2.62
105 106 6.719370 TGCCTAATTATCCAACAACAGAAAGT 59.281 34.615 0.00 0.00 0.00 2.66
106 107 7.885922 TGCCTAATTATCCAACAACAGAAAGTA 59.114 33.333 0.00 0.00 0.00 2.24
107 108 8.736244 GCCTAATTATCCAACAACAGAAAGTAA 58.264 33.333 0.00 0.00 0.00 2.24
111 112 8.706322 ATTATCCAACAACAGAAAGTAAAGGT 57.294 30.769 0.00 0.00 0.00 3.50
112 113 9.802039 ATTATCCAACAACAGAAAGTAAAGGTA 57.198 29.630 0.00 0.00 0.00 3.08
113 114 7.745620 ATCCAACAACAGAAAGTAAAGGTAG 57.254 36.000 0.00 0.00 0.00 3.18
114 115 6.891388 TCCAACAACAGAAAGTAAAGGTAGA 58.109 36.000 0.00 0.00 0.00 2.59
115 116 7.340256 TCCAACAACAGAAAGTAAAGGTAGAA 58.660 34.615 0.00 0.00 0.00 2.10
116 117 7.497909 TCCAACAACAGAAAGTAAAGGTAGAAG 59.502 37.037 0.00 0.00 0.00 2.85
117 118 7.497909 CCAACAACAGAAAGTAAAGGTAGAAGA 59.502 37.037 0.00 0.00 0.00 2.87
118 119 9.057089 CAACAACAGAAAGTAAAGGTAGAAGAT 57.943 33.333 0.00 0.00 0.00 2.40
119 120 8.834749 ACAACAGAAAGTAAAGGTAGAAGATC 57.165 34.615 0.00 0.00 0.00 2.75
120 121 8.429641 ACAACAGAAAGTAAAGGTAGAAGATCA 58.570 33.333 0.00 0.00 0.00 2.92
121 122 9.442047 CAACAGAAAGTAAAGGTAGAAGATCAT 57.558 33.333 0.00 0.00 0.00 2.45
125 126 9.674068 AGAAAGTAAAGGTAGAAGATCATTTCC 57.326 33.333 0.00 0.00 0.00 3.13
126 127 8.809468 AAAGTAAAGGTAGAAGATCATTTCCC 57.191 34.615 0.00 0.00 0.00 3.97
127 128 6.583562 AGTAAAGGTAGAAGATCATTTCCCG 58.416 40.000 0.00 0.00 0.00 5.14
128 129 5.693769 AAAGGTAGAAGATCATTTCCCGA 57.306 39.130 0.00 0.00 0.00 5.14
129 130 5.896073 AAGGTAGAAGATCATTTCCCGAT 57.104 39.130 0.00 0.00 0.00 4.18
130 131 6.996180 AAGGTAGAAGATCATTTCCCGATA 57.004 37.500 0.00 0.00 0.00 2.92
131 132 6.597832 AGGTAGAAGATCATTTCCCGATAG 57.402 41.667 0.00 0.00 0.00 2.08
132 133 6.315714 AGGTAGAAGATCATTTCCCGATAGA 58.684 40.000 0.00 0.00 39.76 1.98
133 134 6.957020 AGGTAGAAGATCATTTCCCGATAGAT 59.043 38.462 0.00 0.00 39.76 1.98
134 135 8.116669 AGGTAGAAGATCATTTCCCGATAGATA 58.883 37.037 0.00 0.00 39.76 1.98
135 136 8.410141 GGTAGAAGATCATTTCCCGATAGATAG 58.590 40.741 0.00 0.00 39.76 2.08
136 137 7.416964 AGAAGATCATTTCCCGATAGATAGG 57.583 40.000 0.00 0.00 39.76 2.57
137 138 7.185565 AGAAGATCATTTCCCGATAGATAGGA 58.814 38.462 0.00 0.00 39.76 2.94
138 139 7.341769 AGAAGATCATTTCCCGATAGATAGGAG 59.658 40.741 0.00 0.00 39.76 3.69
139 140 6.736581 AGATCATTTCCCGATAGATAGGAGA 58.263 40.000 0.00 0.00 39.76 3.71
140 141 6.833416 AGATCATTTCCCGATAGATAGGAGAG 59.167 42.308 0.00 0.00 39.76 3.20
141 142 4.707448 TCATTTCCCGATAGATAGGAGAGC 59.293 45.833 0.00 0.00 39.76 4.09
142 143 4.390129 TTTCCCGATAGATAGGAGAGCT 57.610 45.455 0.00 0.00 39.76 4.09
143 144 5.516059 TTTCCCGATAGATAGGAGAGCTA 57.484 43.478 0.00 0.00 39.76 3.32
144 145 5.718801 TTCCCGATAGATAGGAGAGCTAT 57.281 43.478 0.00 0.00 39.52 2.97
145 146 5.718801 TCCCGATAGATAGGAGAGCTATT 57.281 43.478 0.00 0.00 36.88 1.73
146 147 6.826632 TCCCGATAGATAGGAGAGCTATTA 57.173 41.667 0.00 0.00 36.88 0.98
147 148 7.209340 TCCCGATAGATAGGAGAGCTATTAA 57.791 40.000 0.00 0.00 36.88 1.40
148 149 7.640313 TCCCGATAGATAGGAGAGCTATTAAA 58.360 38.462 0.00 0.00 36.88 1.52
149 150 8.114102 TCCCGATAGATAGGAGAGCTATTAAAA 58.886 37.037 0.00 0.00 36.88 1.52
150 151 8.919145 CCCGATAGATAGGAGAGCTATTAAAAT 58.081 37.037 0.00 0.00 36.88 1.82
151 152 9.959749 CCGATAGATAGGAGAGCTATTAAAATC 57.040 37.037 0.00 0.00 36.88 2.17
152 153 9.959749 CGATAGATAGGAGAGCTATTAAAATCC 57.040 37.037 0.00 0.00 36.88 3.01
155 156 8.497910 AGATAGGAGAGCTATTAAAATCCACA 57.502 34.615 0.00 0.00 0.00 4.17
156 157 8.938883 AGATAGGAGAGCTATTAAAATCCACAA 58.061 33.333 0.00 0.00 0.00 3.33
157 158 9.561069 GATAGGAGAGCTATTAAAATCCACAAA 57.439 33.333 0.00 0.00 0.00 2.83
158 159 7.631717 AGGAGAGCTATTAAAATCCACAAAC 57.368 36.000 0.00 0.00 0.00 2.93
159 160 7.175104 AGGAGAGCTATTAAAATCCACAAACA 58.825 34.615 0.00 0.00 0.00 2.83
160 161 7.836183 AGGAGAGCTATTAAAATCCACAAACAT 59.164 33.333 0.00 0.00 0.00 2.71
161 162 7.917505 GGAGAGCTATTAAAATCCACAAACATG 59.082 37.037 0.00 0.00 0.00 3.21
162 163 8.579850 AGAGCTATTAAAATCCACAAACATGA 57.420 30.769 0.00 0.00 0.00 3.07
163 164 9.023962 AGAGCTATTAAAATCCACAAACATGAA 57.976 29.630 0.00 0.00 0.00 2.57
164 165 9.807649 GAGCTATTAAAATCCACAAACATGAAT 57.192 29.630 0.00 0.00 0.00 2.57
165 166 9.807649 AGCTATTAAAATCCACAAACATGAATC 57.192 29.630 0.00 0.00 0.00 2.52
166 167 9.585099 GCTATTAAAATCCACAAACATGAATCA 57.415 29.630 0.00 0.00 0.00 2.57
169 170 9.865321 ATTAAAATCCACAAACATGAATCAGAG 57.135 29.630 0.00 0.00 0.00 3.35
170 171 5.909621 AATCCACAAACATGAATCAGAGG 57.090 39.130 0.00 0.00 0.00 3.69
171 172 4.639078 TCCACAAACATGAATCAGAGGA 57.361 40.909 0.00 0.00 0.00 3.71
172 173 4.582869 TCCACAAACATGAATCAGAGGAG 58.417 43.478 0.00 0.00 0.00 3.69
173 174 3.693085 CCACAAACATGAATCAGAGGAGG 59.307 47.826 0.00 0.00 0.00 4.30
174 175 3.693085 CACAAACATGAATCAGAGGAGGG 59.307 47.826 0.00 0.00 0.00 4.30
175 176 3.285484 CAAACATGAATCAGAGGAGGGG 58.715 50.000 0.00 0.00 0.00 4.79
176 177 2.277008 ACATGAATCAGAGGAGGGGT 57.723 50.000 0.00 0.00 0.00 4.95
177 178 1.842562 ACATGAATCAGAGGAGGGGTG 59.157 52.381 0.00 0.00 0.00 4.61
178 179 0.842635 ATGAATCAGAGGAGGGGTGC 59.157 55.000 0.00 0.00 0.00 5.01
179 180 1.274703 TGAATCAGAGGAGGGGTGCC 61.275 60.000 0.00 0.00 0.00 5.01
180 181 2.317149 GAATCAGAGGAGGGGTGCCG 62.317 65.000 0.00 0.00 0.00 5.69
190 191 4.699522 GGGTGCCGGGAGACACAC 62.700 72.222 2.18 0.00 38.57 3.82
191 192 3.936203 GGTGCCGGGAGACACACA 61.936 66.667 2.18 0.00 38.57 3.72
192 193 2.110213 GTGCCGGGAGACACACAA 59.890 61.111 2.18 0.00 36.77 3.33
193 194 1.525077 GTGCCGGGAGACACACAAA 60.525 57.895 2.18 0.00 36.77 2.83
194 195 1.098712 GTGCCGGGAGACACACAAAA 61.099 55.000 2.18 0.00 36.77 2.44
195 196 0.817634 TGCCGGGAGACACACAAAAG 60.818 55.000 2.18 0.00 0.00 2.27
196 197 0.818040 GCCGGGAGACACACAAAAGT 60.818 55.000 2.18 0.00 0.00 2.66
197 198 1.226746 CCGGGAGACACACAAAAGTC 58.773 55.000 0.00 0.00 35.02 3.01
199 200 2.561569 CGGGAGACACACAAAAGTCTT 58.438 47.619 0.00 0.00 44.61 3.01
200 201 2.287915 CGGGAGACACACAAAAGTCTTG 59.712 50.000 0.00 0.00 44.61 3.02
201 202 2.033424 GGGAGACACACAAAAGTCTTGC 59.967 50.000 0.00 0.00 44.61 4.01
202 203 2.286418 GGAGACACACAAAAGTCTTGCG 60.286 50.000 0.00 0.00 44.61 4.85
203 204 2.351726 GAGACACACAAAAGTCTTGCGT 59.648 45.455 0.00 0.00 44.61 5.24
204 205 3.527533 AGACACACAAAAGTCTTGCGTA 58.472 40.909 0.00 0.00 42.12 4.42
205 206 3.555956 AGACACACAAAAGTCTTGCGTAG 59.444 43.478 0.00 0.00 42.12 3.51
206 207 6.022709 AGACACACAAAAGTCTTGCGTAGC 62.023 45.833 0.00 0.00 45.19 3.58
218 219 2.791256 CGTAGCCCACAATTGCCG 59.209 61.111 5.05 0.00 0.00 5.69
219 220 2.760159 CGTAGCCCACAATTGCCGG 61.760 63.158 5.05 6.44 0.00 6.13
220 221 2.044451 TAGCCCACAATTGCCGGG 60.044 61.111 23.49 23.49 43.42 5.73
221 222 3.653664 TAGCCCACAATTGCCGGGG 62.654 63.158 26.90 23.82 43.72 5.73
235 236 4.778143 GGGGCACGCAACCGATCT 62.778 66.667 0.00 0.00 42.57 2.75
236 237 2.746277 GGGCACGCAACCGATCTT 60.746 61.111 0.00 0.00 38.29 2.40
237 238 2.750888 GGGCACGCAACCGATCTTC 61.751 63.158 0.00 0.00 38.29 2.87
238 239 2.395690 GCACGCAACCGATCTTCG 59.604 61.111 0.00 0.00 40.07 3.79
239 240 2.395690 CACGCAACCGATCTTCGC 59.604 61.111 0.00 0.00 38.82 4.70
240 241 2.813908 ACGCAACCGATCTTCGCC 60.814 61.111 0.00 0.00 38.82 5.54
241 242 3.913573 CGCAACCGATCTTCGCCG 61.914 66.667 0.00 0.00 38.82 6.46
242 243 4.223964 GCAACCGATCTTCGCCGC 62.224 66.667 0.00 0.00 38.82 6.53
243 244 3.564027 CAACCGATCTTCGCCGCC 61.564 66.667 0.00 0.00 38.82 6.13
246 247 4.647615 CCGATCTTCGCCGCCGAT 62.648 66.667 0.00 0.00 43.97 4.18
247 248 3.398134 CGATCTTCGCCGCCGATG 61.398 66.667 0.00 0.00 43.97 3.84
248 249 3.038417 GATCTTCGCCGCCGATGG 61.038 66.667 1.83 0.00 43.97 3.51
249 250 3.792053 GATCTTCGCCGCCGATGGT 62.792 63.158 1.83 0.00 43.97 3.55
250 251 3.792053 ATCTTCGCCGCCGATGGTC 62.792 63.158 1.83 0.00 43.97 4.02
340 341 2.389059 CACGGTATGCATTCTCTCTCG 58.611 52.381 3.54 0.67 0.00 4.04
341 342 2.025155 ACGGTATGCATTCTCTCTCGT 58.975 47.619 3.54 1.37 0.00 4.18
342 343 2.427453 ACGGTATGCATTCTCTCTCGTT 59.573 45.455 3.54 0.00 0.00 3.85
343 344 3.119101 ACGGTATGCATTCTCTCTCGTTT 60.119 43.478 3.54 0.00 0.00 3.60
347 348 5.232414 GGTATGCATTCTCTCTCGTTTGTAC 59.768 44.000 3.54 0.00 0.00 2.90
377 378 6.007076 TGTGGAAAACAAATCTGGTGCTATA 58.993 36.000 0.00 0.00 35.24 1.31
416 418 1.648467 GACCATGAAAGCTGTCCGGC 61.648 60.000 8.98 0.00 0.00 6.13
475 477 2.733026 TCTCGATTGATACGCATGCATG 59.267 45.455 22.70 22.70 0.00 4.06
579 581 4.217767 TCGTGATCTATATCTTTGTCCCCG 59.782 45.833 0.00 0.00 32.93 5.73
588 590 1.202879 TCTTTGTCCCCGCATCAAACT 60.203 47.619 0.00 0.00 0.00 2.66
624 626 2.031769 ACCAATATCATGCAATGCGTCG 60.032 45.455 0.00 0.00 46.21 5.12
625 627 2.223845 CCAATATCATGCAATGCGTCGA 59.776 45.455 0.00 0.00 46.21 4.20
626 628 3.220773 CAATATCATGCAATGCGTCGAC 58.779 45.455 5.18 5.18 46.21 4.20
627 629 1.933247 TATCATGCAATGCGTCGACA 58.067 45.000 17.16 0.00 46.21 4.35
628 630 1.302366 ATCATGCAATGCGTCGACAT 58.698 45.000 17.16 0.00 46.21 3.06
629 631 1.933247 TCATGCAATGCGTCGACATA 58.067 45.000 17.16 3.57 46.21 2.29
630 632 1.592543 TCATGCAATGCGTCGACATAC 59.407 47.619 17.16 4.78 46.21 2.39
631 633 1.327156 CATGCAATGCGTCGACATACA 59.673 47.619 17.16 10.78 37.62 2.29
632 634 1.650825 TGCAATGCGTCGACATACAT 58.349 45.000 17.16 12.65 0.00 2.29
633 635 2.815478 TGCAATGCGTCGACATACATA 58.185 42.857 17.16 0.00 0.00 2.29
634 636 3.389221 TGCAATGCGTCGACATACATAT 58.611 40.909 17.16 4.67 0.00 1.78
635 637 3.184178 TGCAATGCGTCGACATACATATG 59.816 43.478 17.16 15.13 39.55 1.78
636 638 3.423515 GCAATGCGTCGACATACATATGG 60.424 47.826 17.16 9.79 38.00 2.74
649 651 1.416030 ACATATGGTATGGACGCAGCA 59.584 47.619 7.80 0.00 0.00 4.41
652 654 2.897350 GGTATGGACGCAGCAGCC 60.897 66.667 0.00 0.00 37.52 4.85
661 663 3.129502 GCAGCAGCCGCAATCAGA 61.130 61.111 0.00 0.00 42.27 3.27
662 664 2.789917 CAGCAGCCGCAATCAGAC 59.210 61.111 0.00 0.00 42.27 3.51
663 665 2.036571 CAGCAGCCGCAATCAGACA 61.037 57.895 0.00 0.00 42.27 3.41
664 666 1.744368 AGCAGCCGCAATCAGACAG 60.744 57.895 0.00 0.00 42.27 3.51
799 801 3.911698 TCCGCCATCCATCGTCCG 61.912 66.667 0.00 0.00 0.00 4.79
801 803 4.889856 CGCCATCCATCGTCCGCA 62.890 66.667 0.00 0.00 0.00 5.69
802 804 2.969238 GCCATCCATCGTCCGCAG 60.969 66.667 0.00 0.00 0.00 5.18
803 805 2.501128 CCATCCATCGTCCGCAGT 59.499 61.111 0.00 0.00 0.00 4.40
804 806 1.739667 CCATCCATCGTCCGCAGTA 59.260 57.895 0.00 0.00 0.00 2.74
805 807 0.104120 CCATCCATCGTCCGCAGTAA 59.896 55.000 0.00 0.00 0.00 2.24
806 808 1.270305 CCATCCATCGTCCGCAGTAAT 60.270 52.381 0.00 0.00 0.00 1.89
807 809 2.483876 CATCCATCGTCCGCAGTAATT 58.516 47.619 0.00 0.00 0.00 1.40
808 810 2.684001 TCCATCGTCCGCAGTAATTT 57.316 45.000 0.00 0.00 0.00 1.82
809 811 2.546778 TCCATCGTCCGCAGTAATTTC 58.453 47.619 0.00 0.00 0.00 2.17
810 812 1.257936 CCATCGTCCGCAGTAATTTCG 59.742 52.381 0.00 0.00 0.00 3.46
811 813 0.928229 ATCGTCCGCAGTAATTTCGC 59.072 50.000 0.00 0.00 0.00 4.70
815 817 4.252242 CGCAGTAATTTCGCGCTG 57.748 55.556 5.56 2.51 42.79 5.18
816 818 1.707451 CGCAGTAATTTCGCGCTGA 59.293 52.632 12.45 1.08 42.79 4.26
817 819 0.301687 CGCAGTAATTTCGCGCTGAT 59.698 50.000 12.45 0.00 42.79 2.90
818 820 1.267532 CGCAGTAATTTCGCGCTGATT 60.268 47.619 12.45 9.35 42.79 2.57
819 821 2.034086 CGCAGTAATTTCGCGCTGATTA 60.034 45.455 12.45 8.48 42.79 1.75
820 822 3.362986 CGCAGTAATTTCGCGCTGATTAT 60.363 43.478 12.45 0.00 42.79 1.28
821 823 4.527564 GCAGTAATTTCGCGCTGATTATT 58.472 39.130 12.45 9.80 0.00 1.40
822 824 4.376861 GCAGTAATTTCGCGCTGATTATTG 59.623 41.667 12.45 15.87 0.00 1.90
823 825 4.376861 CAGTAATTTCGCGCTGATTATTGC 59.623 41.667 5.56 10.54 0.00 3.56
831 833 2.961436 CGCTGATTATTGCGTGTCTTC 58.039 47.619 0.00 0.00 46.09 2.87
832 834 2.604914 CGCTGATTATTGCGTGTCTTCT 59.395 45.455 0.00 0.00 46.09 2.85
833 835 3.796717 CGCTGATTATTGCGTGTCTTCTA 59.203 43.478 0.00 0.00 46.09 2.10
834 836 4.445718 CGCTGATTATTGCGTGTCTTCTAT 59.554 41.667 0.00 0.00 46.09 1.98
835 837 5.611197 CGCTGATTATTGCGTGTCTTCTATG 60.611 44.000 0.00 0.00 46.09 2.23
836 838 5.333645 GCTGATTATTGCGTGTCTTCTATGG 60.334 44.000 0.00 0.00 0.00 2.74
837 839 5.670485 TGATTATTGCGTGTCTTCTATGGT 58.330 37.500 0.00 0.00 0.00 3.55
838 840 5.523552 TGATTATTGCGTGTCTTCTATGGTG 59.476 40.000 0.00 0.00 0.00 4.17
839 841 2.093306 TTGCGTGTCTTCTATGGTGG 57.907 50.000 0.00 0.00 0.00 4.61
840 842 0.391130 TGCGTGTCTTCTATGGTGGC 60.391 55.000 0.00 0.00 0.00 5.01
841 843 1.421410 GCGTGTCTTCTATGGTGGCG 61.421 60.000 0.00 0.00 0.00 5.69
842 844 0.108804 CGTGTCTTCTATGGTGGCGT 60.109 55.000 0.00 0.00 0.00 5.68
843 845 1.133598 CGTGTCTTCTATGGTGGCGTA 59.866 52.381 0.00 0.00 0.00 4.42
861 863 4.061596 GCGTACGTAGATCCTACTACCTT 58.938 47.826 17.90 0.00 39.39 3.50
869 871 4.869451 AGATCCTACTACCTTTCCTTCGT 58.131 43.478 0.00 0.00 0.00 3.85
893 895 6.807230 GTCCGTCTATATAACATGCAAGGTAG 59.193 42.308 0.00 0.00 0.00 3.18
952 956 1.201647 CTTGCAGTTCATCAGGCCTTG 59.798 52.381 0.00 0.00 0.00 3.61
1082 1096 2.408050 CGACTTCTTCCTCAACCACAG 58.592 52.381 0.00 0.00 0.00 3.66
1083 1097 2.224066 CGACTTCTTCCTCAACCACAGT 60.224 50.000 0.00 0.00 0.00 3.55
1159 1216 7.668469 TCCAAATAAAGGAAGTTCCCTTACTTC 59.332 37.037 18.65 7.75 46.91 3.01
1169 1226 1.080974 CCTTACTTCGTGTCGCCGT 60.081 57.895 0.00 0.00 0.00 5.68
1180 1237 1.871039 GTGTCGCCGTGCCATATTATT 59.129 47.619 0.00 0.00 0.00 1.40
1213 1270 5.281727 TGCACAAGATATGTAGTAGCTTCG 58.718 41.667 0.00 0.00 41.46 3.79
1237 1614 5.976458 ACTTGTTTTCCATGTGTTCATGTT 58.024 33.333 7.30 0.00 46.99 2.71
1256 1633 8.939201 TCATGTTTGAATGTTTTCAGCTTTTA 57.061 26.923 0.00 0.00 42.60 1.52
1257 1634 9.376075 TCATGTTTGAATGTTTTCAGCTTTTAA 57.624 25.926 0.00 0.00 42.60 1.52
1258 1635 9.985318 CATGTTTGAATGTTTTCAGCTTTTAAA 57.015 25.926 0.00 0.00 42.60 1.52
1300 1678 1.649664 CGAGCATGCACTCTTAGCTT 58.350 50.000 21.98 0.00 35.36 3.74
1329 1796 6.238320 GCTCTCACAAATGTCCAAGATGATAC 60.238 42.308 0.00 0.00 0.00 2.24
1380 1847 2.101415 TGAAGGACATGGCGAGTATCAG 59.899 50.000 0.00 0.00 33.17 2.90
1381 1848 2.073252 AGGACATGGCGAGTATCAGA 57.927 50.000 0.00 0.00 33.17 3.27
1838 2330 1.605753 GTGGGGAAGAAGTGTTGGAC 58.394 55.000 0.00 0.00 0.00 4.02
1885 2377 4.870426 CCGTCTACAATGCATGTTAGAACT 59.130 41.667 15.73 0.00 43.63 3.01
1967 2459 4.770010 AGAGTTGAGAGAGTGGAAACTAGG 59.230 45.833 0.00 0.00 31.45 3.02
2001 2493 4.623167 CGGTGTATGAGAAGAAGTCAACAG 59.377 45.833 0.00 0.00 0.00 3.16
2084 2576 3.997681 GTGAGGAGTTGAAAGCTCTTACC 59.002 47.826 0.00 0.00 33.73 2.85
2198 2699 9.020731 ACTATTAATTTACAGTTGGTGGAAAGG 57.979 33.333 0.00 0.00 42.56 3.11
2283 2784 2.906389 ACTTGGAGTTGTCTATGAGCCA 59.094 45.455 0.00 0.00 0.00 4.75
2410 2911 1.392589 CGCAGCCATGGAAAGGTAAT 58.607 50.000 18.40 0.00 0.00 1.89
2412 2913 2.223572 CGCAGCCATGGAAAGGTAATTC 60.224 50.000 18.40 0.00 0.00 2.17
2415 2916 3.763360 CAGCCATGGAAAGGTAATTCACA 59.237 43.478 18.40 0.00 0.00 3.58
2523 3045 8.964476 TCTTAATTATTCTAGTTCCCAGCAAG 57.036 34.615 0.00 0.00 0.00 4.01
2564 3086 2.125512 GAGCGCACACCCTGTAGG 60.126 66.667 11.47 0.00 43.78 3.18
2604 3127 6.706716 ACACAACTTTAGCTAGGAAACTCTTC 59.293 38.462 0.00 0.00 43.67 2.87
2630 3153 1.497991 TGAACAGCTCTCCGAAAACG 58.502 50.000 0.00 0.00 0.00 3.60
2783 3306 0.327591 CCTCTTTTGCTGCCTCTCCT 59.672 55.000 0.00 0.00 0.00 3.69
2819 3343 4.688511 TTTCATTTTACCGATGTTCCCG 57.311 40.909 0.00 0.00 0.00 5.14
3143 3689 9.456797 GTGTAGAACACGTATATTTTTCTTTCG 57.543 33.333 0.00 0.00 39.53 3.46
3239 3785 8.049721 CCTCCAAGTCAGATTACTCCTTTATTT 58.950 37.037 0.00 0.00 0.00 1.40
3306 3852 8.820933 TGAATTCTTATGATAAGAGAAGCAACG 58.179 33.333 13.96 0.00 33.37 4.10
3318 3864 0.823356 AAGCAACGTCCTGCCATTGT 60.823 50.000 8.57 0.00 43.73 2.71
3333 3879 6.096705 CCTGCCATTGTGAATTCCTATAAACA 59.903 38.462 2.27 0.00 0.00 2.83
3351 3897 9.286946 CTATAAACAAGTAAAGACTCCTACACG 57.713 37.037 0.00 0.00 33.58 4.49
3469 4017 4.892433 TCCCATAATTTTGCAAACACTGG 58.108 39.130 12.39 15.19 0.00 4.00
3512 4080 6.848451 TGTTTTACTCAAGAGTTTTCCACAC 58.152 36.000 8.17 0.00 42.54 3.82
3517 4085 6.339587 ACTCAAGAGTTTTCCACACAAAAA 57.660 33.333 0.00 0.00 38.83 1.94
3559 4127 9.206690 TCCTGATCTTTACTTCACATCTATCTT 57.793 33.333 0.00 0.00 0.00 2.40
3981 5550 9.783081 AAGAATGCTGAATTGGTAAAAGATTTT 57.217 25.926 0.00 0.00 0.00 1.82
4055 5624 4.849883 TGTGTGCCACAAAAGTAAATACG 58.150 39.130 0.00 0.00 41.69 3.06
4062 5631 6.368516 TGCCACAAAAGTAAATACGGTAGTAC 59.631 38.462 0.00 0.00 35.39 2.73
4066 5748 9.195411 CACAAAAGTAAATACGGTAGTACTCAA 57.805 33.333 0.00 0.00 35.39 3.02
4173 5884 7.488150 TGTGTTACATATGAGATTCTTGTCGAC 59.512 37.037 10.38 9.11 0.00 4.20
4184 5895 2.117257 TTGTCGACGTGGGACAAGA 58.883 52.632 21.47 7.03 46.33 3.02
4187 5898 1.069513 TGTCGACGTGGGACAAGAAAT 59.930 47.619 14.69 0.00 44.16 2.17
4190 5901 2.139917 CGACGTGGGACAAGAAATTCA 58.860 47.619 0.00 0.00 44.16 2.57
4498 6401 6.650239 TGTTGCATTTGACAATGAATATGC 57.350 33.333 12.75 12.75 42.35 3.14
4934 6854 8.905103 AAACATATATTTTTCGTACCAACAGC 57.095 30.769 0.00 0.00 0.00 4.40
4979 6899 7.061752 AGTAATCACTTAATCGAACACTTGC 57.938 36.000 0.00 0.00 0.00 4.01
5066 8935 4.394729 TGGTCATGTGGAGGTAAAGAAAC 58.605 43.478 0.00 0.00 0.00 2.78
5124 8995 1.904378 TCGACACCGACACCCATCA 60.904 57.895 0.00 0.00 40.30 3.07
5162 9033 6.729690 ACCAGAATTTGTCATCCTTTCAAA 57.270 33.333 0.00 0.00 35.92 2.69
5173 9044 1.134461 TCCTTTCAAACCGTCGAACCA 60.134 47.619 0.00 0.00 0.00 3.67
5188 9059 2.945008 CGAACCACATCTGTATTGCCAT 59.055 45.455 0.00 0.00 0.00 4.40
5189 9060 3.378112 CGAACCACATCTGTATTGCCATT 59.622 43.478 0.00 0.00 0.00 3.16
5191 9062 4.989279 ACCACATCTGTATTGCCATTTC 57.011 40.909 0.00 0.00 0.00 2.17
5311 9221 2.035626 CGCTGAAACCACCCCCAT 59.964 61.111 0.00 0.00 0.00 4.00
5313 9223 1.384191 GCTGAAACCACCCCCATCT 59.616 57.895 0.00 0.00 0.00 2.90
5420 9330 2.534939 GCTACGCTAAATCTGCACAACG 60.535 50.000 0.00 0.00 0.00 4.10
5467 9377 4.134563 AGACGACATTGTGGCTTTTTACT 58.865 39.130 0.00 0.00 0.00 2.24
5500 9423 0.676466 GATGACCACCATGCGACCAA 60.676 55.000 0.00 0.00 35.17 3.67
5652 9606 3.030291 TGTGTGGCAATTTTCACCTCTT 58.970 40.909 3.15 0.00 33.29 2.85
5712 9666 7.653713 GGGAGAGTTACATAATCCATATATGCG 59.346 40.741 7.24 1.40 34.75 4.73
5754 9725 3.776340 TCAATGCATGCACATGATGAAC 58.224 40.909 25.37 0.00 41.20 3.18
5853 9826 4.729458 GCAAACTTGTACAAAAGAGCACGA 60.729 41.667 10.03 0.00 0.00 4.35
5860 9833 5.534407 TGTACAAAAGAGCACGAGATAACA 58.466 37.500 0.00 0.00 0.00 2.41
6215 10192 7.605449 ACATATTGTATTTATCTTGGCCATGC 58.395 34.615 6.09 0.00 0.00 4.06
6218 10195 5.456548 TGTATTTATCTTGGCCATGCATG 57.543 39.130 20.19 20.19 0.00 4.06
6219 10196 4.894705 TGTATTTATCTTGGCCATGCATGT 59.105 37.500 24.58 7.41 0.00 3.21
6220 10197 6.067350 TGTATTTATCTTGGCCATGCATGTA 58.933 36.000 24.58 8.54 0.00 2.29
6221 10198 6.720748 TGTATTTATCTTGGCCATGCATGTAT 59.279 34.615 24.58 10.52 0.00 2.29
6246 10262 6.757478 TGCGTTTCATTGATATCATGCAAAAT 59.243 30.769 6.17 0.00 0.00 1.82
6247 10263 7.919621 TGCGTTTCATTGATATCATGCAAAATA 59.080 29.630 6.17 0.00 0.00 1.40
6248 10264 8.918658 GCGTTTCATTGATATCATGCAAAATAT 58.081 29.630 6.17 0.00 0.00 1.28
6306 10523 0.606944 TTGTGTATGCCCCCAACGTC 60.607 55.000 0.00 0.00 0.00 4.34
6326 10555 6.409704 ACGTCTGTACATTGTAGAGGTACTA 58.590 40.000 17.98 0.00 43.92 1.82
6360 10590 8.395633 AGTTGTTTAGTGTATGTCTTTTGTGTC 58.604 33.333 0.00 0.00 0.00 3.67
6364 10594 1.795872 TGTATGTCTTTTGTGTCGGCG 59.204 47.619 0.00 0.00 0.00 6.46
6367 10597 1.937278 TGTCTTTTGTGTCGGCGTAA 58.063 45.000 6.85 0.00 0.00 3.18
6377 10607 3.861113 TGTGTCGGCGTAAATCATTAGAC 59.139 43.478 6.85 0.00 0.00 2.59
6395 10625 2.185387 GACCCTACCTCCTGCAAGTTA 58.815 52.381 0.00 0.00 0.00 2.24
6427 10657 6.261826 GCATATAACTTTGGAGCTGACATCTT 59.738 38.462 0.00 0.00 0.00 2.40
6428 10658 7.442364 GCATATAACTTTGGAGCTGACATCTTA 59.558 37.037 0.00 0.00 0.00 2.10
6501 10737 1.799258 CGGTTGGCAAAGAGCTGCTT 61.799 55.000 2.53 0.00 44.79 3.91
6629 10865 1.160137 AGCAAATCGTGGAAGCACTC 58.840 50.000 0.00 0.00 0.00 3.51
6654 10893 5.114081 TCTACAAAGCTAGGAATTTACCGC 58.886 41.667 0.00 0.00 34.73 5.68
6658 10897 2.822764 AGCTAGGAATTTACCGCTTCG 58.177 47.619 0.00 0.00 34.73 3.79
6660 10899 3.118884 AGCTAGGAATTTACCGCTTCGAA 60.119 43.478 0.00 0.00 34.73 3.71
6789 11035 9.603921 ACAGAAAGATCAAAACAAAATGATTGT 57.396 25.926 0.00 0.00 36.45 2.71
6791 11037 9.048446 AGAAAGATCAAAACAAAATGATTGTGG 57.952 29.630 0.00 0.00 36.45 4.17
6792 11038 8.961294 AAAGATCAAAACAAAATGATTGTGGA 57.039 26.923 0.00 0.00 36.45 4.02
6832 11078 9.953697 GTAACAAGTTGACCAACATAACATAAA 57.046 29.630 10.54 0.00 43.47 1.40
6853 11099 4.541973 AAAATGGAATTGGAGAACTGCC 57.458 40.909 0.00 0.00 36.10 4.85
6963 11214 1.189752 TGCCAAGCAACCAGTCAAAA 58.810 45.000 0.00 0.00 34.76 2.44
6990 11241 2.675844 TGAAACGTCAAACACAGTCCAG 59.324 45.455 0.00 0.00 0.00 3.86
7003 11254 4.578928 ACACAGTCCAGATTGTTTGTAACC 59.421 41.667 0.00 0.00 0.00 2.85
7009 11260 4.819630 TCCAGATTGTTTGTAACCAGTGAC 59.180 41.667 0.00 0.00 0.00 3.67
7019 11270 1.105167 AACCAGTGACCGTGAGACGA 61.105 55.000 0.00 0.00 46.05 4.20
7060 11311 4.634004 TCAGTATGAAAACAATAGTGGCCG 59.366 41.667 0.00 0.00 45.97 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.129496 TGTGAAACTCCAATACAGTAGATGTA 57.871 34.615 0.00 0.00 43.05 2.29
1 2 7.004555 TGTGAAACTCCAATACAGTAGATGT 57.995 36.000 0.00 0.00 41.59 3.06
2 3 9.770097 ATATGTGAAACTCCAATACAGTAGATG 57.230 33.333 0.00 0.00 38.04 2.90
9 10 9.542462 GCTACTAATATGTGAAACTCCAATACA 57.458 33.333 0.00 0.00 38.04 2.29
10 11 9.765795 AGCTACTAATATGTGAAACTCCAATAC 57.234 33.333 0.00 0.00 38.04 1.89
11 12 9.764363 CAGCTACTAATATGTGAAACTCCAATA 57.236 33.333 0.00 0.00 38.04 1.90
12 13 7.227512 GCAGCTACTAATATGTGAAACTCCAAT 59.772 37.037 0.00 0.00 38.04 3.16
13 14 6.538742 GCAGCTACTAATATGTGAAACTCCAA 59.461 38.462 0.00 0.00 38.04 3.53
14 15 6.049149 GCAGCTACTAATATGTGAAACTCCA 58.951 40.000 0.00 0.00 38.04 3.86
15 16 6.201806 CAGCAGCTACTAATATGTGAAACTCC 59.798 42.308 0.00 0.00 38.04 3.85
16 17 6.758886 ACAGCAGCTACTAATATGTGAAACTC 59.241 38.462 0.00 0.00 38.04 3.01
17 18 6.644347 ACAGCAGCTACTAATATGTGAAACT 58.356 36.000 0.00 0.00 38.04 2.66
18 19 6.291849 CGACAGCAGCTACTAATATGTGAAAC 60.292 42.308 0.00 0.00 37.35 2.78
19 20 5.748630 CGACAGCAGCTACTAATATGTGAAA 59.251 40.000 0.00 0.00 0.00 2.69
20 21 5.163550 ACGACAGCAGCTACTAATATGTGAA 60.164 40.000 0.00 0.00 0.00 3.18
21 22 4.338400 ACGACAGCAGCTACTAATATGTGA 59.662 41.667 0.00 0.00 0.00 3.58
22 23 4.611943 ACGACAGCAGCTACTAATATGTG 58.388 43.478 0.00 0.00 0.00 3.21
23 24 4.338400 TGACGACAGCAGCTACTAATATGT 59.662 41.667 0.00 0.00 0.00 2.29
24 25 4.860072 TGACGACAGCAGCTACTAATATG 58.140 43.478 0.00 0.00 0.00 1.78
25 26 5.010112 ACATGACGACAGCAGCTACTAATAT 59.990 40.000 0.00 0.00 0.00 1.28
26 27 4.338400 ACATGACGACAGCAGCTACTAATA 59.662 41.667 0.00 0.00 0.00 0.98
27 28 3.131223 ACATGACGACAGCAGCTACTAAT 59.869 43.478 0.00 0.00 0.00 1.73
28 29 2.492088 ACATGACGACAGCAGCTACTAA 59.508 45.455 0.00 0.00 0.00 2.24
29 30 2.092323 ACATGACGACAGCAGCTACTA 58.908 47.619 0.00 0.00 0.00 1.82
30 31 0.891373 ACATGACGACAGCAGCTACT 59.109 50.000 0.00 0.00 0.00 2.57
31 32 1.714794 AACATGACGACAGCAGCTAC 58.285 50.000 0.00 0.00 0.00 3.58
32 33 2.455674 AAACATGACGACAGCAGCTA 57.544 45.000 0.00 0.00 0.00 3.32
33 34 2.455674 TAAACATGACGACAGCAGCT 57.544 45.000 0.00 0.00 0.00 4.24
34 35 3.747099 ATTAAACATGACGACAGCAGC 57.253 42.857 0.00 0.00 0.00 5.25
35 36 5.007039 AGCATATTAAACATGACGACAGCAG 59.993 40.000 0.00 0.00 0.00 4.24
36 37 4.875536 AGCATATTAAACATGACGACAGCA 59.124 37.500 0.00 0.00 0.00 4.41
37 38 5.200454 CAGCATATTAAACATGACGACAGC 58.800 41.667 0.00 0.00 0.00 4.40
38 39 5.523552 TCCAGCATATTAAACATGACGACAG 59.476 40.000 0.00 0.00 0.00 3.51
39 40 5.423886 TCCAGCATATTAAACATGACGACA 58.576 37.500 0.00 0.00 0.00 4.35
40 41 5.984233 TCCAGCATATTAAACATGACGAC 57.016 39.130 0.00 0.00 0.00 4.34
41 42 7.566760 AATTCCAGCATATTAAACATGACGA 57.433 32.000 0.00 0.00 0.00 4.20
42 43 9.897744 ATTAATTCCAGCATATTAAACATGACG 57.102 29.630 0.00 0.00 31.95 4.35
52 53 9.912634 CGTTTCCATAATTAATTCCAGCATATT 57.087 29.630 3.39 0.00 0.00 1.28
53 54 9.295825 TCGTTTCCATAATTAATTCCAGCATAT 57.704 29.630 3.39 0.00 0.00 1.78
54 55 8.684386 TCGTTTCCATAATTAATTCCAGCATA 57.316 30.769 3.39 0.00 0.00 3.14
55 56 7.581213 TCGTTTCCATAATTAATTCCAGCAT 57.419 32.000 3.39 0.00 0.00 3.79
56 57 7.424803 CATCGTTTCCATAATTAATTCCAGCA 58.575 34.615 3.39 0.00 0.00 4.41
57 58 6.363357 GCATCGTTTCCATAATTAATTCCAGC 59.637 38.462 3.39 0.00 0.00 4.85
58 59 6.863126 GGCATCGTTTCCATAATTAATTCCAG 59.137 38.462 3.39 0.00 0.00 3.86
59 60 6.549364 AGGCATCGTTTCCATAATTAATTCCA 59.451 34.615 3.39 0.00 0.00 3.53
60 61 6.981722 AGGCATCGTTTCCATAATTAATTCC 58.018 36.000 3.39 0.00 0.00 3.01
66 67 8.739972 GGATAATTAGGCATCGTTTCCATAATT 58.260 33.333 0.00 0.00 0.00 1.40
67 68 7.888021 TGGATAATTAGGCATCGTTTCCATAAT 59.112 33.333 0.00 0.00 0.00 1.28
68 69 7.227873 TGGATAATTAGGCATCGTTTCCATAA 58.772 34.615 0.00 0.00 0.00 1.90
69 70 6.774673 TGGATAATTAGGCATCGTTTCCATA 58.225 36.000 0.00 0.00 0.00 2.74
70 71 5.630121 TGGATAATTAGGCATCGTTTCCAT 58.370 37.500 0.00 0.00 0.00 3.41
71 72 5.042463 TGGATAATTAGGCATCGTTTCCA 57.958 39.130 0.00 0.00 0.00 3.53
72 73 5.298276 TGTTGGATAATTAGGCATCGTTTCC 59.702 40.000 0.00 0.00 0.00 3.13
73 74 6.371809 TGTTGGATAATTAGGCATCGTTTC 57.628 37.500 0.00 0.00 0.00 2.78
74 75 6.151985 TGTTGTTGGATAATTAGGCATCGTTT 59.848 34.615 0.00 0.00 0.00 3.60
75 76 5.650266 TGTTGTTGGATAATTAGGCATCGTT 59.350 36.000 0.00 0.00 0.00 3.85
76 77 5.189928 TGTTGTTGGATAATTAGGCATCGT 58.810 37.500 0.00 0.00 0.00 3.73
77 78 5.527214 TCTGTTGTTGGATAATTAGGCATCG 59.473 40.000 0.00 0.00 0.00 3.84
78 79 6.942532 TCTGTTGTTGGATAATTAGGCATC 57.057 37.500 0.00 0.00 0.00 3.91
79 80 7.397192 ACTTTCTGTTGTTGGATAATTAGGCAT 59.603 33.333 0.00 0.00 0.00 4.40
80 81 6.719370 ACTTTCTGTTGTTGGATAATTAGGCA 59.281 34.615 0.00 0.00 0.00 4.75
81 82 7.158099 ACTTTCTGTTGTTGGATAATTAGGC 57.842 36.000 0.00 0.00 0.00 3.93
85 86 9.143155 ACCTTTACTTTCTGTTGTTGGATAATT 57.857 29.630 0.00 0.00 0.00 1.40
86 87 8.706322 ACCTTTACTTTCTGTTGTTGGATAAT 57.294 30.769 0.00 0.00 0.00 1.28
87 88 9.280174 CTACCTTTACTTTCTGTTGTTGGATAA 57.720 33.333 0.00 0.00 0.00 1.75
88 89 8.653191 TCTACCTTTACTTTCTGTTGTTGGATA 58.347 33.333 0.00 0.00 0.00 2.59
89 90 7.514721 TCTACCTTTACTTTCTGTTGTTGGAT 58.485 34.615 0.00 0.00 0.00 3.41
90 91 6.891388 TCTACCTTTACTTTCTGTTGTTGGA 58.109 36.000 0.00 0.00 0.00 3.53
91 92 7.497909 TCTTCTACCTTTACTTTCTGTTGTTGG 59.502 37.037 0.00 0.00 0.00 3.77
92 93 8.433421 TCTTCTACCTTTACTTTCTGTTGTTG 57.567 34.615 0.00 0.00 0.00 3.33
93 94 9.274206 GATCTTCTACCTTTACTTTCTGTTGTT 57.726 33.333 0.00 0.00 0.00 2.83
94 95 8.429641 TGATCTTCTACCTTTACTTTCTGTTGT 58.570 33.333 0.00 0.00 0.00 3.32
95 96 8.833231 TGATCTTCTACCTTTACTTTCTGTTG 57.167 34.615 0.00 0.00 0.00 3.33
99 100 9.674068 GGAAATGATCTTCTACCTTTACTTTCT 57.326 33.333 0.00 0.00 0.00 2.52
100 101 8.894731 GGGAAATGATCTTCTACCTTTACTTTC 58.105 37.037 0.00 0.00 0.00 2.62
101 102 7.553044 CGGGAAATGATCTTCTACCTTTACTTT 59.447 37.037 0.00 0.00 0.00 2.66
102 103 7.048512 CGGGAAATGATCTTCTACCTTTACTT 58.951 38.462 0.00 0.00 0.00 2.24
103 104 6.383147 TCGGGAAATGATCTTCTACCTTTACT 59.617 38.462 0.00 0.00 0.00 2.24
104 105 6.579865 TCGGGAAATGATCTTCTACCTTTAC 58.420 40.000 0.00 0.00 0.00 2.01
105 106 6.801718 TCGGGAAATGATCTTCTACCTTTA 57.198 37.500 0.00 0.00 0.00 1.85
106 107 5.693769 TCGGGAAATGATCTTCTACCTTT 57.306 39.130 0.00 0.00 0.00 3.11
107 108 5.896073 ATCGGGAAATGATCTTCTACCTT 57.104 39.130 0.00 0.00 0.00 3.50
108 109 6.315714 TCTATCGGGAAATGATCTTCTACCT 58.684 40.000 0.00 0.00 0.00 3.08
109 110 6.591750 TCTATCGGGAAATGATCTTCTACC 57.408 41.667 0.00 0.00 0.00 3.18
110 111 8.410141 CCTATCTATCGGGAAATGATCTTCTAC 58.590 40.741 0.00 0.00 0.00 2.59
111 112 8.336987 TCCTATCTATCGGGAAATGATCTTCTA 58.663 37.037 0.00 0.00 0.00 2.10
112 113 7.185565 TCCTATCTATCGGGAAATGATCTTCT 58.814 38.462 0.00 0.00 0.00 2.85
113 114 7.340743 TCTCCTATCTATCGGGAAATGATCTTC 59.659 40.741 0.00 0.00 0.00 2.87
114 115 7.185565 TCTCCTATCTATCGGGAAATGATCTT 58.814 38.462 0.00 0.00 0.00 2.40
115 116 6.736581 TCTCCTATCTATCGGGAAATGATCT 58.263 40.000 0.00 0.00 0.00 2.75
116 117 6.460953 GCTCTCCTATCTATCGGGAAATGATC 60.461 46.154 0.00 0.00 0.00 2.92
117 118 5.362430 GCTCTCCTATCTATCGGGAAATGAT 59.638 44.000 0.00 0.00 0.00 2.45
118 119 4.707448 GCTCTCCTATCTATCGGGAAATGA 59.293 45.833 0.00 0.00 0.00 2.57
119 120 4.709397 AGCTCTCCTATCTATCGGGAAATG 59.291 45.833 0.00 0.00 0.00 2.32
120 121 4.941713 AGCTCTCCTATCTATCGGGAAAT 58.058 43.478 0.00 0.00 0.00 2.17
121 122 4.390129 AGCTCTCCTATCTATCGGGAAA 57.610 45.455 0.00 0.00 0.00 3.13
122 123 5.718801 ATAGCTCTCCTATCTATCGGGAA 57.281 43.478 0.00 0.00 30.89 3.97
123 124 5.718801 AATAGCTCTCCTATCTATCGGGA 57.281 43.478 0.00 0.00 35.70 5.14
124 125 7.883391 TTTAATAGCTCTCCTATCTATCGGG 57.117 40.000 0.00 0.00 35.70 5.14
125 126 9.959749 GATTTTAATAGCTCTCCTATCTATCGG 57.040 37.037 0.00 0.00 35.70 4.18
126 127 9.959749 GGATTTTAATAGCTCTCCTATCTATCG 57.040 37.037 0.00 0.00 35.70 2.92
129 130 9.601810 TGTGGATTTTAATAGCTCTCCTATCTA 57.398 33.333 0.00 0.00 35.70 1.98
130 131 8.497910 TGTGGATTTTAATAGCTCTCCTATCT 57.502 34.615 0.00 0.00 35.70 1.98
131 132 9.561069 TTTGTGGATTTTAATAGCTCTCCTATC 57.439 33.333 0.00 0.00 35.70 2.08
132 133 9.343539 GTTTGTGGATTTTAATAGCTCTCCTAT 57.656 33.333 0.00 0.00 38.40 2.57
133 134 8.325787 TGTTTGTGGATTTTAATAGCTCTCCTA 58.674 33.333 0.00 0.00 0.00 2.94
134 135 7.175104 TGTTTGTGGATTTTAATAGCTCTCCT 58.825 34.615 0.00 0.00 0.00 3.69
135 136 7.391148 TGTTTGTGGATTTTAATAGCTCTCC 57.609 36.000 0.00 0.00 0.00 3.71
136 137 8.677300 TCATGTTTGTGGATTTTAATAGCTCTC 58.323 33.333 0.00 0.00 0.00 3.20
137 138 8.579850 TCATGTTTGTGGATTTTAATAGCTCT 57.420 30.769 0.00 0.00 0.00 4.09
138 139 9.807649 ATTCATGTTTGTGGATTTTAATAGCTC 57.192 29.630 0.00 0.00 0.00 4.09
139 140 9.807649 GATTCATGTTTGTGGATTTTAATAGCT 57.192 29.630 0.00 0.00 0.00 3.32
140 141 9.585099 TGATTCATGTTTGTGGATTTTAATAGC 57.415 29.630 0.00 0.00 0.00 2.97
143 144 9.865321 CTCTGATTCATGTTTGTGGATTTTAAT 57.135 29.630 0.00 0.00 0.00 1.40
144 145 8.306038 CCTCTGATTCATGTTTGTGGATTTTAA 58.694 33.333 0.00 0.00 0.00 1.52
145 146 7.669304 TCCTCTGATTCATGTTTGTGGATTTTA 59.331 33.333 0.00 0.00 0.00 1.52
146 147 6.494491 TCCTCTGATTCATGTTTGTGGATTTT 59.506 34.615 0.00 0.00 0.00 1.82
147 148 6.012113 TCCTCTGATTCATGTTTGTGGATTT 58.988 36.000 0.00 0.00 0.00 2.17
148 149 5.573219 TCCTCTGATTCATGTTTGTGGATT 58.427 37.500 0.00 0.00 0.00 3.01
149 150 5.183530 TCCTCTGATTCATGTTTGTGGAT 57.816 39.130 0.00 0.00 0.00 3.41
150 151 4.566278 CCTCCTCTGATTCATGTTTGTGGA 60.566 45.833 0.00 0.00 0.00 4.02
151 152 3.693085 CCTCCTCTGATTCATGTTTGTGG 59.307 47.826 0.00 0.00 0.00 4.17
152 153 3.693085 CCCTCCTCTGATTCATGTTTGTG 59.307 47.826 0.00 0.00 0.00 3.33
153 154 3.308688 CCCCTCCTCTGATTCATGTTTGT 60.309 47.826 0.00 0.00 0.00 2.83
154 155 3.285484 CCCCTCCTCTGATTCATGTTTG 58.715 50.000 0.00 0.00 0.00 2.93
155 156 2.922283 ACCCCTCCTCTGATTCATGTTT 59.078 45.455 0.00 0.00 0.00 2.83
156 157 2.240667 CACCCCTCCTCTGATTCATGTT 59.759 50.000 0.00 0.00 0.00 2.71
157 158 1.842562 CACCCCTCCTCTGATTCATGT 59.157 52.381 0.00 0.00 0.00 3.21
158 159 1.476471 GCACCCCTCCTCTGATTCATG 60.476 57.143 0.00 0.00 0.00 3.07
159 160 0.842635 GCACCCCTCCTCTGATTCAT 59.157 55.000 0.00 0.00 0.00 2.57
160 161 1.274703 GGCACCCCTCCTCTGATTCA 61.275 60.000 0.00 0.00 0.00 2.57
161 162 1.529309 GGCACCCCTCCTCTGATTC 59.471 63.158 0.00 0.00 0.00 2.52
162 163 2.370445 CGGCACCCCTCCTCTGATT 61.370 63.158 0.00 0.00 0.00 2.57
163 164 2.765807 CGGCACCCCTCCTCTGAT 60.766 66.667 0.00 0.00 0.00 2.90
173 174 4.699522 GTGTGTCTCCCGGCACCC 62.700 72.222 0.00 0.00 34.94 4.61
174 175 2.951475 TTTGTGTGTCTCCCGGCACC 62.951 60.000 0.00 0.00 34.94 5.01
175 176 1.098712 TTTTGTGTGTCTCCCGGCAC 61.099 55.000 0.00 0.00 36.26 5.01
176 177 0.817634 CTTTTGTGTGTCTCCCGGCA 60.818 55.000 0.00 0.00 0.00 5.69
177 178 0.818040 ACTTTTGTGTGTCTCCCGGC 60.818 55.000 0.00 0.00 0.00 6.13
178 179 1.202651 AGACTTTTGTGTGTCTCCCGG 60.203 52.381 0.00 0.00 39.04 5.73
179 180 2.240493 AGACTTTTGTGTGTCTCCCG 57.760 50.000 0.00 0.00 39.04 5.14
180 181 2.033424 GCAAGACTTTTGTGTGTCTCCC 59.967 50.000 0.00 0.00 42.02 4.30
181 182 2.286418 CGCAAGACTTTTGTGTGTCTCC 60.286 50.000 0.00 0.00 42.02 3.71
182 183 2.351726 ACGCAAGACTTTTGTGTGTCTC 59.648 45.455 5.40 0.00 42.02 3.36
183 184 2.356135 ACGCAAGACTTTTGTGTGTCT 58.644 42.857 5.40 0.00 44.40 3.41
184 185 2.825086 ACGCAAGACTTTTGTGTGTC 57.175 45.000 5.40 0.00 41.07 3.67
185 186 2.031683 GCTACGCAAGACTTTTGTGTGT 59.968 45.455 14.35 3.32 42.37 3.72
186 187 2.602217 GGCTACGCAAGACTTTTGTGTG 60.602 50.000 14.35 7.25 42.37 3.82
187 188 1.602377 GGCTACGCAAGACTTTTGTGT 59.398 47.619 10.45 10.45 44.29 3.72
188 189 1.069227 GGGCTACGCAAGACTTTTGTG 60.069 52.381 0.00 0.00 43.62 3.33
189 190 1.235724 GGGCTACGCAAGACTTTTGT 58.764 50.000 0.00 0.00 43.62 2.83
190 191 1.069227 GTGGGCTACGCAAGACTTTTG 60.069 52.381 0.00 0.00 43.62 2.44
191 192 1.235724 GTGGGCTACGCAAGACTTTT 58.764 50.000 0.00 0.00 43.62 2.27
192 193 0.107831 TGTGGGCTACGCAAGACTTT 59.892 50.000 0.00 0.00 43.62 2.66
193 194 0.107831 TTGTGGGCTACGCAAGACTT 59.892 50.000 0.00 0.00 44.16 3.01
194 195 1.752198 TTGTGGGCTACGCAAGACT 59.248 52.632 0.00 0.00 44.16 3.24
195 196 4.371975 TTGTGGGCTACGCAAGAC 57.628 55.556 0.00 0.00 44.16 3.01
199 200 2.339556 GGCAATTGTGGGCTACGCA 61.340 57.895 7.40 0.00 37.93 5.24
200 201 2.489751 GGCAATTGTGGGCTACGC 59.510 61.111 7.40 0.00 0.00 4.42
201 202 2.760159 CCGGCAATTGTGGGCTACG 61.760 63.158 7.40 1.45 0.00 3.51
202 203 2.414785 CCCGGCAATTGTGGGCTAC 61.415 63.158 20.50 0.00 35.82 3.58
203 204 2.044451 CCCGGCAATTGTGGGCTA 60.044 61.111 20.50 0.00 35.82 3.93
218 219 4.778143 AGATCGGTTGCGTGCCCC 62.778 66.667 0.00 0.00 0.00 5.80
219 220 2.746277 AAGATCGGTTGCGTGCCC 60.746 61.111 0.00 0.00 0.00 5.36
220 221 2.785258 GAAGATCGGTTGCGTGCC 59.215 61.111 0.00 0.00 0.00 5.01
221 222 2.395690 CGAAGATCGGTTGCGTGC 59.604 61.111 0.00 0.00 36.00 5.34
222 223 2.395690 GCGAAGATCGGTTGCGTG 59.604 61.111 1.64 0.00 40.84 5.34
223 224 2.813908 GGCGAAGATCGGTTGCGT 60.814 61.111 1.64 0.00 40.84 5.24
224 225 3.913573 CGGCGAAGATCGGTTGCG 61.914 66.667 0.00 0.00 40.84 4.85
225 226 4.223964 GCGGCGAAGATCGGTTGC 62.224 66.667 12.98 3.67 40.84 4.17
226 227 3.564027 GGCGGCGAAGATCGGTTG 61.564 66.667 12.98 0.00 40.84 3.77
229 230 4.647615 ATCGGCGGCGAAGATCGG 62.648 66.667 37.73 3.72 40.84 4.18
230 231 3.398134 CATCGGCGGCGAAGATCG 61.398 66.667 37.73 19.14 43.89 3.69
231 232 3.038417 CCATCGGCGGCGAAGATC 61.038 66.667 37.73 0.00 0.00 2.75
232 233 3.792053 GACCATCGGCGGCGAAGAT 62.792 63.158 37.73 22.62 0.00 2.40
233 234 4.508128 GACCATCGGCGGCGAAGA 62.508 66.667 37.73 16.66 0.00 2.87
242 243 1.153449 TAAGCAAGGCGACCATCGG 60.153 57.895 0.00 0.00 40.84 4.18
243 244 1.766143 GCTAAGCAAGGCGACCATCG 61.766 60.000 0.00 0.00 43.89 3.84
244 245 0.744414 TGCTAAGCAAGGCGACCATC 60.744 55.000 0.00 0.00 34.76 3.51
245 246 0.745845 CTGCTAAGCAAGGCGACCAT 60.746 55.000 0.00 0.00 38.41 3.55
246 247 1.375908 CTGCTAAGCAAGGCGACCA 60.376 57.895 0.00 0.00 38.41 4.02
247 248 3.490890 CTGCTAAGCAAGGCGACC 58.509 61.111 0.00 0.00 38.41 4.79
257 258 1.731720 GGACTGGTTCTGCTGCTAAG 58.268 55.000 0.00 0.00 0.00 2.18
340 341 6.289745 TGTTTTCCACAGATACGTACAAAC 57.710 37.500 0.00 0.00 0.00 2.93
341 342 6.922247 TTGTTTTCCACAGATACGTACAAA 57.078 33.333 0.00 0.00 36.48 2.83
342 343 6.922247 TTTGTTTTCCACAGATACGTACAA 57.078 33.333 0.00 0.00 36.48 2.41
343 344 6.932400 AGATTTGTTTTCCACAGATACGTACA 59.068 34.615 0.00 0.00 36.48 2.90
347 348 5.181245 ACCAGATTTGTTTTCCACAGATACG 59.819 40.000 0.00 0.00 36.48 3.06
449 451 1.269257 TGCGTATCAATCGAGAGGCTG 60.269 52.381 0.00 0.00 43.04 4.85
450 452 1.032794 TGCGTATCAATCGAGAGGCT 58.967 50.000 0.00 0.00 43.04 4.58
476 478 7.820648 ACAACCAGTCTTAAGAGCATTTTATG 58.179 34.615 5.12 1.29 0.00 1.90
478 480 7.435068 GACAACCAGTCTTAAGAGCATTTTA 57.565 36.000 5.12 0.00 44.09 1.52
479 481 6.319141 GACAACCAGTCTTAAGAGCATTTT 57.681 37.500 5.12 0.00 44.09 1.82
480 482 5.948992 GACAACCAGTCTTAAGAGCATTT 57.051 39.130 5.12 0.00 44.09 2.32
579 581 7.432252 GGTGTGCTAAATATGTAAGTTTGATGC 59.568 37.037 0.00 0.00 0.00 3.91
627 629 3.260632 TGCTGCGTCCATACCATATGTAT 59.739 43.478 1.24 0.00 40.91 2.29
628 630 2.630580 TGCTGCGTCCATACCATATGTA 59.369 45.455 1.24 0.00 0.00 2.29
629 631 1.416030 TGCTGCGTCCATACCATATGT 59.584 47.619 1.24 0.00 0.00 2.29
630 632 2.071540 CTGCTGCGTCCATACCATATG 58.928 52.381 0.00 0.00 0.00 1.78
631 633 1.609061 GCTGCTGCGTCCATACCATAT 60.609 52.381 0.00 0.00 0.00 1.78
632 634 0.249868 GCTGCTGCGTCCATACCATA 60.250 55.000 0.00 0.00 0.00 2.74
633 635 1.524621 GCTGCTGCGTCCATACCAT 60.525 57.895 0.00 0.00 0.00 3.55
634 636 2.125147 GCTGCTGCGTCCATACCA 60.125 61.111 0.00 0.00 0.00 3.25
635 637 2.897350 GGCTGCTGCGTCCATACC 60.897 66.667 9.65 0.00 40.82 2.73
636 638 3.264897 CGGCTGCTGCGTCCATAC 61.265 66.667 9.65 0.00 40.82 2.39
641 643 4.527157 GATTGCGGCTGCTGCGTC 62.527 66.667 26.64 22.20 43.34 5.19
649 651 0.390866 CTCACTGTCTGATTGCGGCT 60.391 55.000 0.00 0.00 0.00 5.52
652 654 2.257894 GACTCTCACTGTCTGATTGCG 58.742 52.381 0.00 0.00 0.00 4.85
661 663 4.874966 GGTACTATGTACGACTCTCACTGT 59.125 45.833 0.00 0.00 0.00 3.55
662 664 4.025896 CGGTACTATGTACGACTCTCACTG 60.026 50.000 0.00 0.00 0.00 3.66
663 665 4.118410 CGGTACTATGTACGACTCTCACT 58.882 47.826 0.00 0.00 0.00 3.41
664 666 3.868077 ACGGTACTATGTACGACTCTCAC 59.132 47.826 0.00 0.00 0.00 3.51
717 719 0.991344 CGAATGGCCGCAAAAATGTC 59.009 50.000 0.00 0.00 0.00 3.06
799 801 2.458592 AATCAGCGCGAAATTACTGC 57.541 45.000 12.10 0.00 0.00 4.40
800 802 4.376861 GCAATAATCAGCGCGAAATTACTG 59.623 41.667 12.10 11.06 0.00 2.74
801 803 4.527564 GCAATAATCAGCGCGAAATTACT 58.472 39.130 12.10 0.00 0.00 2.24
802 804 4.851349 GCAATAATCAGCGCGAAATTAC 57.149 40.909 12.10 0.00 0.00 1.89
812 814 5.333645 CCATAGAAGACACGCAATAATCAGC 60.334 44.000 0.00 0.00 0.00 4.26
813 815 5.755375 ACCATAGAAGACACGCAATAATCAG 59.245 40.000 0.00 0.00 0.00 2.90
814 816 5.523552 CACCATAGAAGACACGCAATAATCA 59.476 40.000 0.00 0.00 0.00 2.57
815 817 5.050091 CCACCATAGAAGACACGCAATAATC 60.050 44.000 0.00 0.00 0.00 1.75
816 818 4.816385 CCACCATAGAAGACACGCAATAAT 59.184 41.667 0.00 0.00 0.00 1.28
817 819 4.188462 CCACCATAGAAGACACGCAATAA 58.812 43.478 0.00 0.00 0.00 1.40
818 820 3.792401 CCACCATAGAAGACACGCAATA 58.208 45.455 0.00 0.00 0.00 1.90
819 821 2.632377 CCACCATAGAAGACACGCAAT 58.368 47.619 0.00 0.00 0.00 3.56
820 822 1.943968 GCCACCATAGAAGACACGCAA 60.944 52.381 0.00 0.00 0.00 4.85
821 823 0.391130 GCCACCATAGAAGACACGCA 60.391 55.000 0.00 0.00 0.00 5.24
822 824 1.421410 CGCCACCATAGAAGACACGC 61.421 60.000 0.00 0.00 0.00 5.34
823 825 0.108804 ACGCCACCATAGAAGACACG 60.109 55.000 0.00 0.00 0.00 4.49
824 826 2.537401 GTACGCCACCATAGAAGACAC 58.463 52.381 0.00 0.00 0.00 3.67
825 827 1.133598 CGTACGCCACCATAGAAGACA 59.866 52.381 0.52 0.00 0.00 3.41
826 828 1.133790 ACGTACGCCACCATAGAAGAC 59.866 52.381 16.72 0.00 0.00 3.01
827 829 1.466856 ACGTACGCCACCATAGAAGA 58.533 50.000 16.72 0.00 0.00 2.87
828 830 2.615447 TCTACGTACGCCACCATAGAAG 59.385 50.000 16.72 0.00 0.00 2.85
829 831 2.642427 TCTACGTACGCCACCATAGAA 58.358 47.619 16.72 0.00 0.00 2.10
830 832 2.330440 TCTACGTACGCCACCATAGA 57.670 50.000 16.72 10.85 0.00 1.98
831 833 2.095364 GGATCTACGTACGCCACCATAG 60.095 54.545 16.72 8.54 0.00 2.23
832 834 1.881973 GGATCTACGTACGCCACCATA 59.118 52.381 16.72 0.00 0.00 2.74
833 835 0.672342 GGATCTACGTACGCCACCAT 59.328 55.000 16.72 0.03 0.00 3.55
834 836 0.394762 AGGATCTACGTACGCCACCA 60.395 55.000 16.72 0.00 0.00 4.17
835 837 1.265365 GTAGGATCTACGTACGCCACC 59.735 57.143 16.72 11.77 31.76 4.61
836 838 2.216898 AGTAGGATCTACGTACGCCAC 58.783 52.381 16.72 8.81 42.45 5.01
837 839 2.627515 AGTAGGATCTACGTACGCCA 57.372 50.000 16.72 2.17 42.45 5.69
838 840 2.739379 GGTAGTAGGATCTACGTACGCC 59.261 54.545 16.72 8.04 42.45 5.68
839 841 3.658709 AGGTAGTAGGATCTACGTACGC 58.341 50.000 16.72 0.00 42.45 4.42
840 842 5.178438 GGAAAGGTAGTAGGATCTACGTACG 59.822 48.000 15.01 15.01 42.45 3.67
841 843 6.295249 AGGAAAGGTAGTAGGATCTACGTAC 58.705 44.000 0.00 0.00 40.58 3.67
842 844 6.506538 AGGAAAGGTAGTAGGATCTACGTA 57.493 41.667 0.00 0.00 40.58 3.57
843 845 5.385628 AGGAAAGGTAGTAGGATCTACGT 57.614 43.478 0.00 0.00 40.58 3.57
861 863 6.675026 CATGTTATATAGACGGACGAAGGAA 58.325 40.000 0.00 0.00 0.00 3.36
869 871 5.801531 ACCTTGCATGTTATATAGACGGA 57.198 39.130 0.00 0.00 0.00 4.69
893 895 1.461127 CTTGAAGAAGTGCGGTGCTAC 59.539 52.381 0.00 0.00 0.00 3.58
940 944 0.679002 GCTCAAGCAAGGCCTGATGA 60.679 55.000 5.69 7.96 41.59 2.92
952 956 1.131883 GATGATGTGTGGTGCTCAAGC 59.868 52.381 0.00 0.00 42.50 4.01
1082 1096 1.376543 CTGTGATGGAGTGCATGGAC 58.623 55.000 9.70 9.70 0.00 4.02
1083 1097 0.253894 CCTGTGATGGAGTGCATGGA 59.746 55.000 0.12 0.00 0.00 3.41
1159 1216 0.872451 TAATATGGCACGGCGACACG 60.872 55.000 16.62 0.00 40.31 4.49
1169 1226 5.231702 GCATGTGCATTCAATAATATGGCA 58.768 37.500 0.00 0.00 41.59 4.92
1213 1270 5.591099 ACATGAACACATGGAAAACAAGTC 58.409 37.500 13.44 0.00 43.73 3.01
1300 1678 2.942804 TGGACATTTGTGAGAGCCAAA 58.057 42.857 0.00 0.00 36.34 3.28
1380 1847 1.002087 TCTTTCTCACCCGCTCCTTTC 59.998 52.381 0.00 0.00 0.00 2.62
1381 1848 1.056660 TCTTTCTCACCCGCTCCTTT 58.943 50.000 0.00 0.00 0.00 3.11
1579 2046 2.380064 ACCCATGCTTCCTCAACAAA 57.620 45.000 0.00 0.00 0.00 2.83
1838 2330 5.712217 TCTTGGTGAAAATAATAGCGTCG 57.288 39.130 0.00 0.00 0.00 5.12
1885 2377 0.759959 TGCCAACCACGGTTCTAGAA 59.240 50.000 0.00 0.00 36.00 2.10
1967 2459 1.202440 TCATACACCGGGATGTAACGC 60.202 52.381 6.32 0.00 38.53 4.84
2001 2493 6.238593 GCAAACTCCAATATGTCTTCATCTCC 60.239 42.308 0.00 0.00 35.70 3.71
2283 2784 8.958119 ACATTACACGTGAATAGGAATATTGT 57.042 30.769 25.01 10.75 0.00 2.71
2523 3045 0.750850 TATCACCTAACGGCCTCTGC 59.249 55.000 0.00 0.00 0.00 4.26
2564 3086 5.590104 AGTTGTGTTGTTTTGCTTCAAAC 57.410 34.783 0.00 0.00 32.79 2.93
2604 3127 2.690497 TCGGAGAGCTGTTCATAAGGAG 59.310 50.000 0.00 0.00 0.00 3.69
2630 3153 4.609947 TCAACACATGCAAGTCAAACATC 58.390 39.130 0.00 0.00 0.00 3.06
2783 3306 1.227249 TGAAAAAGGAGGTGGGGTGA 58.773 50.000 0.00 0.00 0.00 4.02
2905 3430 1.448985 TAGCGGCCAACTGAATCAAC 58.551 50.000 2.24 0.00 0.00 3.18
3032 3578 8.816640 ATCAAGTTGGTGAAAACAATTACATC 57.183 30.769 2.34 0.00 32.21 3.06
3239 3785 6.656632 TTTGGCTTATGTACATTGTTTGGA 57.343 33.333 14.77 0.00 0.00 3.53
3304 3850 1.812571 GAATTCACAATGGCAGGACGT 59.187 47.619 0.00 0.00 0.00 4.34
3306 3852 2.450476 AGGAATTCACAATGGCAGGAC 58.550 47.619 7.93 0.00 0.00 3.85
3333 3879 3.509184 GGGTCGTGTAGGAGTCTTTACTT 59.491 47.826 0.00 0.00 35.56 2.24
3351 3897 4.652822 AGTCAAGGACAATTGTTAGGGTC 58.347 43.478 13.36 0.00 34.60 4.46
3517 4085 2.086610 AGGAACTGTGGCACCAAATT 57.913 45.000 16.26 3.80 37.18 1.82
3530 4098 7.251321 AGATGTGAAGTAAAGATCAGGAACT 57.749 36.000 0.00 0.00 43.88 3.01
3981 5550 8.282455 TGGTACAATCTTCAAAAACACTTACA 57.718 30.769 0.00 0.00 31.92 2.41
4055 5624 9.099454 CTTGATACAAAATCCTTGAGTACTACC 57.901 37.037 0.00 0.00 0.00 3.18
4135 5818 9.486497 CTCATATGTAACACATAGATGCTCTTT 57.514 33.333 1.90 0.00 43.51 2.52
4154 5837 4.442403 CCACGTCGACAAGAATCTCATATG 59.558 45.833 17.16 0.00 0.00 1.78
4173 5884 6.254281 ACTTATTGAATTTCTTGTCCCACG 57.746 37.500 0.00 0.00 0.00 4.94
4184 5895 6.431234 AGAAGCTCGGACAACTTATTGAATTT 59.569 34.615 0.00 0.00 39.30 1.82
4187 5898 4.894784 AGAAGCTCGGACAACTTATTGAA 58.105 39.130 0.00 0.00 39.30 2.69
4190 5901 4.021016 AGTGAGAAGCTCGGACAACTTATT 60.021 41.667 0.00 0.00 32.35 1.40
4454 6267 7.009999 GCAACATCAAGAAACACATAAACAACA 59.990 33.333 0.00 0.00 0.00 3.33
4610 6524 6.764560 ACGTGGATTACCTAAATAATGTGACC 59.235 38.462 0.00 0.00 37.04 4.02
4619 6533 2.240160 TGGCCACGTGGATTACCTAAAT 59.760 45.455 38.30 0.00 37.39 1.40
4759 6673 6.716284 TGTAGTCACATCACCCATGAAAATA 58.284 36.000 0.00 0.00 38.69 1.40
4764 6678 3.837731 TCTTGTAGTCACATCACCCATGA 59.162 43.478 0.00 0.00 39.83 3.07
4765 6679 4.081476 TCTCTTGTAGTCACATCACCCATG 60.081 45.833 0.00 0.00 38.64 3.66
4932 6852 8.247666 ACTAGATAACTTTAATTAGGACCGCT 57.752 34.615 0.00 0.00 0.00 5.52
5066 8935 3.208594 TGGAGGCATCATTGAGAAATCG 58.791 45.455 0.00 0.00 0.00 3.34
5162 9033 1.250328 TACAGATGTGGTTCGACGGT 58.750 50.000 0.00 0.00 0.00 4.83
5173 9044 2.358898 GGCGAAATGGCAATACAGATGT 59.641 45.455 0.00 0.00 44.08 3.06
5188 9059 2.032620 GATCAGGTCTCCTAGGCGAAA 58.967 52.381 2.20 0.00 29.64 3.46
5189 9060 1.063942 TGATCAGGTCTCCTAGGCGAA 60.064 52.381 2.20 0.00 29.64 4.70
5191 9062 0.958091 CTGATCAGGTCTCCTAGGCG 59.042 60.000 15.38 0.00 29.64 5.52
5311 9221 1.398692 GTGTTGGGAAAGGCACAAGA 58.601 50.000 0.00 0.00 41.45 3.02
5313 9223 0.324738 TGGTGTTGGGAAAGGCACAA 60.325 50.000 0.00 0.00 37.63 3.33
5420 9330 1.968540 GGCAGCTCAACCACCACTC 60.969 63.158 0.00 0.00 0.00 3.51
5518 9469 2.030805 CCTAGACAAAAGTGGCTTGTGC 60.031 50.000 0.00 0.00 42.06 4.57
5527 9478 7.168905 CCTAGTTTTGGATCCTAGACAAAAGT 58.831 38.462 17.03 16.04 44.93 2.66
5596 9547 2.270205 CGTGCTCCCTCATTGCCT 59.730 61.111 0.00 0.00 0.00 4.75
5620 9574 1.702182 TGCCACACATGTTGGTTCAT 58.298 45.000 20.87 0.00 0.00 2.57
5735 9704 2.159014 GGGTTCATCATGTGCATGCATT 60.159 45.455 25.64 12.11 38.65 3.56
5853 9826 4.826274 TTGGCTTCTGCTACTGTTATCT 57.174 40.909 0.00 0.00 39.59 1.98
5860 9833 3.871485 CTTCTCATTGGCTTCTGCTACT 58.129 45.455 0.00 0.00 39.59 2.57
6215 10192 7.007995 GCATGATATCAATGAAACGCATACATG 59.992 37.037 9.99 0.00 35.78 3.21
6218 10195 6.372981 TGCATGATATCAATGAAACGCATAC 58.627 36.000 9.99 0.00 35.78 2.39
6219 10196 6.557291 TGCATGATATCAATGAAACGCATA 57.443 33.333 9.99 0.00 35.78 3.14
6220 10197 5.441709 TGCATGATATCAATGAAACGCAT 57.558 34.783 9.99 0.00 39.43 4.73
6221 10198 4.897025 TGCATGATATCAATGAAACGCA 57.103 36.364 9.99 7.32 0.00 5.24
6296 10513 1.448985 CAATGTACAGACGTTGGGGG 58.551 55.000 0.33 0.00 45.27 5.40
6326 10555 7.769044 AGACATACACTAAACAACTCAAACTGT 59.231 33.333 0.00 0.00 0.00 3.55
6360 10590 3.107642 AGGGTCTAATGATTTACGCCG 57.892 47.619 4.54 0.00 0.00 6.46
6364 10594 6.741801 GCAGGAGGTAGGGTCTAATGATTTAC 60.742 46.154 0.00 0.00 0.00 2.01
6367 10597 3.648545 GCAGGAGGTAGGGTCTAATGATT 59.351 47.826 0.00 0.00 0.00 2.57
6377 10607 2.771943 TGATAACTTGCAGGAGGTAGGG 59.228 50.000 1.40 0.00 0.00 3.53
6395 10625 6.430308 CAGCTCCAAAGTTATATGCTGATGAT 59.570 38.462 12.54 0.00 46.23 2.45
6501 10737 3.799281 CCAAGCTTTGGTTGTCTTTCA 57.201 42.857 0.00 0.00 45.93 2.69
6629 10865 6.292919 GCGGTAAATTCCTAGCTTTGTAGATG 60.293 42.308 0.00 0.00 0.00 2.90
6654 10893 5.283953 GCTAATTTTCTTCCGCTTTTCGAAG 59.716 40.000 0.00 0.00 41.67 3.79
6658 10897 4.805219 TGGCTAATTTTCTTCCGCTTTTC 58.195 39.130 0.00 0.00 0.00 2.29
6660 10899 3.367395 GCTGGCTAATTTTCTTCCGCTTT 60.367 43.478 0.00 0.00 0.00 3.51
6664 10903 3.274288 AGAGCTGGCTAATTTTCTTCCG 58.726 45.455 0.00 0.00 0.00 4.30
6665 10904 5.675538 TCTAGAGCTGGCTAATTTTCTTCC 58.324 41.667 0.00 0.00 0.00 3.46
6750 10996 2.581208 TTTCTGTGTCGCGGTGGTGT 62.581 55.000 6.13 0.00 0.00 4.16
6832 11078 3.056607 CGGCAGTTCTCCAATTCCATTTT 60.057 43.478 0.00 0.00 0.00 1.82
6837 11083 1.943340 GATCGGCAGTTCTCCAATTCC 59.057 52.381 0.00 0.00 0.00 3.01
6853 11099 5.027737 CCGGTGTTAATTTCACATTGATCG 58.972 41.667 12.98 7.62 37.52 3.69
6963 11214 3.331150 TGTGTTTGACGTTTCAGTCTGT 58.669 40.909 0.00 0.00 41.47 3.41
6990 11241 3.562557 ACGGTCACTGGTTACAAACAATC 59.437 43.478 0.00 0.00 0.00 2.67
7003 11254 1.847818 TTTTCGTCTCACGGTCACTG 58.152 50.000 0.00 0.00 42.81 3.66
7009 11260 4.430007 TCCTATGATTTTTCGTCTCACGG 58.570 43.478 0.00 0.00 42.81 4.94
7043 11294 1.268352 GCACGGCCACTATTGTTTTCA 59.732 47.619 2.24 0.00 0.00 2.69
7052 11303 3.739167 GTGTTTGCACGGCCACTA 58.261 55.556 2.24 0.00 35.75 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.