Multiple sequence alignment - TraesCS2A01G048000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G048000 chr2A 100.000 2655 0 0 1 2655 18585805 18588459 0.000000e+00 4903
1 TraesCS2A01G048000 chr2A 90.350 1917 147 19 63 1948 18635433 18637342 0.000000e+00 2481
2 TraesCS2A01G048000 chr2A 86.357 689 65 14 1981 2651 58217257 58216580 0.000000e+00 725
3 TraesCS2A01G048000 chr2B 90.586 1997 139 21 2 1984 29045775 29047736 0.000000e+00 2601
4 TraesCS2A01G048000 chr2B 89.117 1801 159 24 7 1788 29992412 29990630 0.000000e+00 2206
5 TraesCS2A01G048000 chr2B 91.733 629 49 2 1046 1674 28921248 28921873 0.000000e+00 870
6 TraesCS2A01G048000 chr2B 86.957 391 33 9 53 429 28920445 28920831 8.790000e-115 424
7 TraesCS2A01G048000 chr2B 84.946 186 14 4 1800 1984 29990592 29990420 2.720000e-40 176
8 TraesCS2A01G048000 chr2D 89.934 1967 147 36 9 1948 17311737 17313679 0.000000e+00 2488
9 TraesCS2A01G048000 chr2D 91.031 1048 81 9 912 1948 17169522 17170567 0.000000e+00 1402
10 TraesCS2A01G048000 chr2D 88.488 860 69 13 9 851 17168676 17169522 0.000000e+00 1013
11 TraesCS2A01G048000 chr2D 85.808 458 49 11 1536 1984 17208646 17209096 3.090000e-129 472
12 TraesCS2A01G048000 chr2D 89.328 253 23 3 1288 1539 17208272 17208521 5.520000e-82 315
13 TraesCS2A01G048000 chr7D 88.444 675 61 12 1981 2653 385622568 385621909 0.000000e+00 798
14 TraesCS2A01G048000 chr7D 86.657 682 74 9 1987 2653 407706655 407705976 0.000000e+00 739
15 TraesCS2A01G048000 chr1A 87.826 690 68 7 1981 2655 114353013 114352325 0.000000e+00 795
16 TraesCS2A01G048000 chr6B 87.936 688 64 9 1981 2653 222338894 222339577 0.000000e+00 793
17 TraesCS2A01G048000 chr6A 87.120 691 64 17 1981 2653 250736805 250737488 0.000000e+00 760
18 TraesCS2A01G048000 chr7A 87.842 658 57 12 1981 2622 433468927 433468277 0.000000e+00 750
19 TraesCS2A01G048000 chr5D 86.812 690 68 14 1981 2653 476319232 476319915 0.000000e+00 749
20 TraesCS2A01G048000 chr1B 86.541 691 68 14 1981 2653 117594988 117594305 0.000000e+00 737
21 TraesCS2A01G048000 chr1B 85.652 683 81 12 1981 2653 305916489 305917164 0.000000e+00 702
22 TraesCS2A01G048000 chr1D 86.067 689 74 14 1981 2653 212848379 212849061 0.000000e+00 721
23 TraesCS2A01G048000 chr4B 85.915 639 66 14 2034 2655 427248547 427247916 0.000000e+00 660
24 TraesCS2A01G048000 chr4B 82.467 673 92 19 1986 2645 182799344 182800003 1.380000e-157 566
25 TraesCS2A01G048000 chr4A 83.759 665 83 20 1990 2645 119095046 119095694 8.130000e-170 606


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G048000 chr2A 18585805 18588459 2654 False 4903.0 4903 100.0000 1 2655 1 chr2A.!!$F1 2654
1 TraesCS2A01G048000 chr2A 18635433 18637342 1909 False 2481.0 2481 90.3500 63 1948 1 chr2A.!!$F2 1885
2 TraesCS2A01G048000 chr2A 58216580 58217257 677 True 725.0 725 86.3570 1981 2651 1 chr2A.!!$R1 670
3 TraesCS2A01G048000 chr2B 29045775 29047736 1961 False 2601.0 2601 90.5860 2 1984 1 chr2B.!!$F1 1982
4 TraesCS2A01G048000 chr2B 29990420 29992412 1992 True 1191.0 2206 87.0315 7 1984 2 chr2B.!!$R1 1977
5 TraesCS2A01G048000 chr2B 28920445 28921873 1428 False 647.0 870 89.3450 53 1674 2 chr2B.!!$F2 1621
6 TraesCS2A01G048000 chr2D 17311737 17313679 1942 False 2488.0 2488 89.9340 9 1948 1 chr2D.!!$F1 1939
7 TraesCS2A01G048000 chr2D 17168676 17170567 1891 False 1207.5 1402 89.7595 9 1948 2 chr2D.!!$F2 1939
8 TraesCS2A01G048000 chr2D 17208272 17209096 824 False 393.5 472 87.5680 1288 1984 2 chr2D.!!$F3 696
9 TraesCS2A01G048000 chr7D 385621909 385622568 659 True 798.0 798 88.4440 1981 2653 1 chr7D.!!$R1 672
10 TraesCS2A01G048000 chr7D 407705976 407706655 679 True 739.0 739 86.6570 1987 2653 1 chr7D.!!$R2 666
11 TraesCS2A01G048000 chr1A 114352325 114353013 688 True 795.0 795 87.8260 1981 2655 1 chr1A.!!$R1 674
12 TraesCS2A01G048000 chr6B 222338894 222339577 683 False 793.0 793 87.9360 1981 2653 1 chr6B.!!$F1 672
13 TraesCS2A01G048000 chr6A 250736805 250737488 683 False 760.0 760 87.1200 1981 2653 1 chr6A.!!$F1 672
14 TraesCS2A01G048000 chr7A 433468277 433468927 650 True 750.0 750 87.8420 1981 2622 1 chr7A.!!$R1 641
15 TraesCS2A01G048000 chr5D 476319232 476319915 683 False 749.0 749 86.8120 1981 2653 1 chr5D.!!$F1 672
16 TraesCS2A01G048000 chr1B 117594305 117594988 683 True 737.0 737 86.5410 1981 2653 1 chr1B.!!$R1 672
17 TraesCS2A01G048000 chr1B 305916489 305917164 675 False 702.0 702 85.6520 1981 2653 1 chr1B.!!$F1 672
18 TraesCS2A01G048000 chr1D 212848379 212849061 682 False 721.0 721 86.0670 1981 2653 1 chr1D.!!$F1 672
19 TraesCS2A01G048000 chr4B 427247916 427248547 631 True 660.0 660 85.9150 2034 2655 1 chr4B.!!$R1 621
20 TraesCS2A01G048000 chr4B 182799344 182800003 659 False 566.0 566 82.4670 1986 2645 1 chr4B.!!$F1 659
21 TraesCS2A01G048000 chr4A 119095046 119095694 648 False 606.0 606 83.7590 1990 2645 1 chr4A.!!$F1 655

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
571 794 1.30593 CCTAACTGAAGCGGTTGGGC 61.306 60.0 3.7 0.0 42.66 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1713 2151 0.827368 TGGCTGCCGTGTACATCATA 59.173 50.0 14.98 0.0 0.0 2.15 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
140 146 6.402118 CGACATGGGTTTTAAGTCATAGTGTG 60.402 42.308 0.00 0.00 0.00 3.82
143 149 7.389607 ACATGGGTTTTAAGTCATAGTGTGTAC 59.610 37.037 0.00 0.00 0.00 2.90
145 151 6.932400 TGGGTTTTAAGTCATAGTGTGTACAG 59.068 38.462 0.00 0.00 0.00 2.74
146 152 6.370718 GGGTTTTAAGTCATAGTGTGTACAGG 59.629 42.308 0.00 0.00 0.00 4.00
147 153 7.156673 GGTTTTAAGTCATAGTGTGTACAGGA 58.843 38.462 0.00 0.00 0.00 3.86
198 208 8.154203 TGAGATGTTGTCCTTTTGTTCAGTATA 58.846 33.333 0.00 0.00 0.00 1.47
306 316 1.549170 ACAAGGTCCCTACGCTAACTG 59.451 52.381 0.00 0.00 0.00 3.16
471 694 4.634199 CAGTTAAACGGAGAAACCCACTA 58.366 43.478 0.00 0.00 34.64 2.74
476 699 3.329929 ACGGAGAAACCCACTATGTTC 57.670 47.619 0.00 0.00 34.64 3.18
479 702 4.069304 CGGAGAAACCCACTATGTTCAAA 58.931 43.478 0.00 0.00 34.64 2.69
516 739 7.005296 TCCACTAATATCTGTCCTTCTACCTC 58.995 42.308 0.00 0.00 0.00 3.85
571 794 1.305930 CCTAACTGAAGCGGTTGGGC 61.306 60.000 3.70 0.00 42.66 5.36
591 814 4.712829 GGGCTAAAATTTAGGCAGGGTTAA 59.287 41.667 31.13 0.00 41.30 2.01
782 1005 8.016497 TGGCGATATTTGCAAATAATTTATGC 57.984 30.769 30.12 24.32 40.45 3.14
1018 1315 3.690460 ACCATAGCCTTCAAGAAACAGG 58.310 45.455 0.00 0.00 0.00 4.00
1063 1363 6.674694 ATCGAATCTCAAGGTGAAGATTTG 57.325 37.500 0.00 6.14 32.64 2.32
1106 1407 6.000219 TCAAGCTAGTTTCTTCTTGCTCATT 59.000 36.000 3.60 0.00 43.25 2.57
1229 1530 3.567585 GGATTAAGATCTTGGCTGCCTTC 59.432 47.826 21.03 11.21 32.66 3.46
1259 1560 1.745653 GCCATGGTTACTCAAGGCTTC 59.254 52.381 14.67 0.00 45.08 3.86
1295 1596 2.636830 GGGACAGTGAGGAATGACATG 58.363 52.381 0.00 0.00 0.00 3.21
1298 1599 3.306989 GGACAGTGAGGAATGACATGACA 60.307 47.826 0.00 0.00 0.00 3.58
1308 1609 4.202295 GGAATGACATGACAGATGAGGCTA 60.202 45.833 0.00 0.00 0.00 3.93
1349 1650 4.695231 GCAGGCAGCAGCACAACG 62.695 66.667 2.65 0.00 44.61 4.10
1447 1748 7.670979 TGGTGGTGATACTACAAAGAACTAGTA 59.329 37.037 0.00 0.00 30.50 1.82
1459 1760 7.963532 ACAAAGAACTAGTACCATTCTCTGAA 58.036 34.615 10.20 0.00 31.44 3.02
1482 1783 3.119101 ACTGTTCTGTTCGCCGAAGATAT 60.119 43.478 0.00 0.00 0.00 1.63
1483 1784 4.097437 ACTGTTCTGTTCGCCGAAGATATA 59.903 41.667 0.00 0.00 0.00 0.86
1524 1825 8.471361 AATGTCATATTGTATAGATGTCAGCG 57.529 34.615 0.00 0.00 0.00 5.18
1734 2173 0.744057 TGATGTACACGGCAGCCATG 60.744 55.000 13.30 9.65 0.00 3.66
1764 2205 4.910195 TCATGCCTACAATCTGTTGTTCT 58.090 39.130 0.00 0.00 46.07 3.01
1790 2231 7.014711 TGGAAAGAACCAAATTAACTGCATACA 59.985 33.333 0.00 0.00 36.96 2.29
1838 2305 9.090692 CATGGTTTTATGCTTCAATTTCTAAGG 57.909 33.333 0.00 0.00 0.00 2.69
1886 2353 5.602628 ACTAAGGGAAACTCTAATCGATGC 58.397 41.667 0.00 0.00 0.00 3.91
1887 2354 3.477210 AGGGAAACTCTAATCGATGCC 57.523 47.619 0.00 0.00 0.00 4.40
1888 2355 2.104963 AGGGAAACTCTAATCGATGCCC 59.895 50.000 0.00 0.00 0.00 5.36
1889 2356 2.158813 GGGAAACTCTAATCGATGCCCA 60.159 50.000 0.00 0.00 33.28 5.36
1890 2357 3.134458 GGAAACTCTAATCGATGCCCAG 58.866 50.000 0.00 0.00 0.00 4.45
1891 2358 3.181465 GGAAACTCTAATCGATGCCCAGA 60.181 47.826 0.00 0.00 0.00 3.86
1892 2359 4.442706 GAAACTCTAATCGATGCCCAGAA 58.557 43.478 0.00 0.00 0.00 3.02
1893 2360 3.460857 ACTCTAATCGATGCCCAGAAC 57.539 47.619 0.00 0.00 0.00 3.01
1894 2361 3.034635 ACTCTAATCGATGCCCAGAACT 58.965 45.455 0.00 0.00 0.00 3.01
1895 2362 3.452627 ACTCTAATCGATGCCCAGAACTT 59.547 43.478 0.00 0.00 0.00 2.66
1896 2363 4.649674 ACTCTAATCGATGCCCAGAACTTA 59.350 41.667 0.00 0.00 0.00 2.24
1897 2364 5.128827 ACTCTAATCGATGCCCAGAACTTAA 59.871 40.000 0.00 0.00 0.00 1.85
1898 2365 5.984725 TCTAATCGATGCCCAGAACTTAAA 58.015 37.500 0.00 0.00 0.00 1.52
1956 2438 0.419865 TCTGGGTATTGGGAGGGTGA 59.580 55.000 0.00 0.00 0.00 4.02
1975 2457 4.142381 GGTGACTTCTAAATGATGCCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
2083 2572 8.894409 ATTAGTTTTTGCTTTGTTTGCTTTTC 57.106 26.923 0.00 0.00 0.00 2.29
2097 2586 3.871485 TGCTTTTCAGTTTGCCACAATT 58.129 36.364 0.00 0.00 0.00 2.32
2131 2620 2.241176 ACACACCTTTTGAGAGGGACAA 59.759 45.455 0.00 0.00 41.31 3.18
2203 2695 2.217429 GAGCTAGGCAGTTGCTCTAC 57.783 55.000 12.44 1.01 46.69 2.59
2212 2704 2.759191 CAGTTGCTCTACTGCTTCACA 58.241 47.619 0.00 0.00 39.12 3.58
2335 2830 8.090214 GGTAATATGCACGGGTTATAAGACTAA 58.910 37.037 0.00 0.00 0.00 2.24
2340 2835 4.748600 GCACGGGTTATAAGACTAATCCAC 59.251 45.833 0.00 0.00 32.29 4.02
2538 3051 5.410924 GGAGGTTTGAGCATTTGTATTTCC 58.589 41.667 0.00 0.00 0.00 3.13
2581 3097 2.647529 ATAATCGGATGCACGCGATA 57.352 45.000 15.93 0.00 33.83 2.92
2612 3128 4.227527 CCTACCAACCAATTTCCTAGGAGT 59.772 45.833 12.26 2.95 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
140 146 4.065281 ACACGGCGGCTCCTGTAC 62.065 66.667 13.24 0.00 0.00 2.90
145 151 2.660258 AATATCCACACGGCGGCTCC 62.660 60.000 13.24 0.00 0.00 4.70
146 152 0.032952 TAATATCCACACGGCGGCTC 59.967 55.000 13.24 0.00 0.00 4.70
147 153 0.033504 CTAATATCCACACGGCGGCT 59.966 55.000 13.24 0.00 0.00 5.52
306 316 6.868622 TCAGATAAGACAACTCTTTCTAGCC 58.131 40.000 0.00 0.00 37.87 3.93
457 680 3.328382 TGAACATAGTGGGTTTCTCCG 57.672 47.619 0.00 0.00 37.00 4.63
471 694 4.828939 TGGAGTCATTGAGCTTTTGAACAT 59.171 37.500 0.00 0.00 0.00 2.71
476 699 5.947228 TTAGTGGAGTCATTGAGCTTTTG 57.053 39.130 0.00 0.00 0.00 2.44
479 702 7.147585 ACAGATATTAGTGGAGTCATTGAGCTT 60.148 37.037 0.00 0.00 0.00 3.74
516 739 8.302438 TGTCATCATCTATCTATGTAAGCACAG 58.698 37.037 0.00 0.00 38.30 3.66
571 794 7.559897 TGGAGATTAACCCTGCCTAAATTTTAG 59.440 37.037 8.88 8.88 0.00 1.85
727 950 7.629157 TGAAGATTATGGTGATTACTTGGTCA 58.371 34.615 0.00 0.00 0.00 4.02
1018 1315 6.564125 CGATTGAAGTTTGGATATTCTACGCC 60.564 42.308 0.00 0.00 0.00 5.68
1063 1363 3.674997 TGAACAAAGAGTCATACCTGGC 58.325 45.455 0.00 0.00 0.00 4.85
1135 1436 7.457218 AGAGACACATGGATAGGAATATCATGT 59.543 37.037 0.00 0.00 33.12 3.21
1150 1451 6.427853 TGAATTAACTTGACAGAGACACATGG 59.572 38.462 0.00 0.00 0.00 3.66
1229 1530 0.251916 TAACCATGGCGAAGACCAGG 59.748 55.000 13.04 0.00 44.71 4.45
1280 1581 4.468868 TCATCTGTCATGTCATTCCTCACT 59.531 41.667 0.00 0.00 0.00 3.41
1295 1596 2.753296 GTGCTGATAGCCTCATCTGTC 58.247 52.381 0.00 0.00 41.51 3.51
1298 1599 1.697284 TCGTGCTGATAGCCTCATCT 58.303 50.000 0.00 0.00 41.51 2.90
1308 1609 0.110486 AGGGTGGTTTTCGTGCTGAT 59.890 50.000 0.00 0.00 0.00 2.90
1379 1680 4.354087 TCTCCTCCATGGCTACTATACTGA 59.646 45.833 6.96 0.00 35.26 3.41
1447 1748 5.041191 ACAGAACAGTTTCAGAGAATGGT 57.959 39.130 0.00 0.00 33.72 3.55
1459 1760 1.202486 TCTTCGGCGAACAGAACAGTT 60.202 47.619 19.83 0.00 0.00 3.16
1683 2121 1.881641 TACACACACACGCGCGAATG 61.882 55.000 39.36 32.34 0.00 2.67
1688 2126 1.492319 TTCCTTACACACACACGCGC 61.492 55.000 5.73 0.00 0.00 6.86
1713 2151 0.827368 TGGCTGCCGTGTACATCATA 59.173 50.000 14.98 0.00 0.00 2.15
1734 2173 9.241317 CAACAGATTGTAGGCATGAATTTATTC 57.759 33.333 0.00 0.00 37.31 1.75
1764 2205 5.860941 TGCAGTTAATTTGGTTCTTTCCA 57.139 34.783 0.00 0.00 35.49 3.53
1790 2231 9.730705 CCATGATTAATCAGTACTCAACCATAT 57.269 33.333 21.97 0.00 40.64 1.78
1838 2305 5.180680 ACGTGTAGGGCAAATCTTCTTTTAC 59.819 40.000 0.00 0.00 0.00 2.01
1841 2308 3.751518 ACGTGTAGGGCAAATCTTCTTT 58.248 40.909 0.00 0.00 0.00 2.52
1871 2338 4.080863 AGTTCTGGGCATCGATTAGAGTTT 60.081 41.667 0.00 0.00 0.00 2.66
1886 2353 4.038763 GGAGTTTTGGGTTTAAGTTCTGGG 59.961 45.833 0.00 0.00 0.00 4.45
1887 2354 4.647399 TGGAGTTTTGGGTTTAAGTTCTGG 59.353 41.667 0.00 0.00 0.00 3.86
1888 2355 5.845391 TGGAGTTTTGGGTTTAAGTTCTG 57.155 39.130 0.00 0.00 0.00 3.02
1889 2356 5.538813 GGATGGAGTTTTGGGTTTAAGTTCT 59.461 40.000 0.00 0.00 0.00 3.01
1890 2357 5.279306 GGGATGGAGTTTTGGGTTTAAGTTC 60.279 44.000 0.00 0.00 0.00 3.01
1891 2358 4.591498 GGGATGGAGTTTTGGGTTTAAGTT 59.409 41.667 0.00 0.00 0.00 2.66
1892 2359 4.157246 GGGATGGAGTTTTGGGTTTAAGT 58.843 43.478 0.00 0.00 0.00 2.24
1893 2360 3.513912 GGGGATGGAGTTTTGGGTTTAAG 59.486 47.826 0.00 0.00 0.00 1.85
1894 2361 3.116707 TGGGGATGGAGTTTTGGGTTTAA 60.117 43.478 0.00 0.00 0.00 1.52
1895 2362 2.451273 TGGGGATGGAGTTTTGGGTTTA 59.549 45.455 0.00 0.00 0.00 2.01
1896 2363 1.221781 TGGGGATGGAGTTTTGGGTTT 59.778 47.619 0.00 0.00 0.00 3.27
1897 2364 0.863956 TGGGGATGGAGTTTTGGGTT 59.136 50.000 0.00 0.00 0.00 4.11
1898 2365 0.863956 TTGGGGATGGAGTTTTGGGT 59.136 50.000 0.00 0.00 0.00 4.51
1956 2438 4.666512 AGTGTTGGGCATCATTTAGAAGT 58.333 39.130 0.00 0.00 0.00 3.01
1975 2457 9.193133 CCAAGTAACATACCGATAGATTAAGTG 57.807 37.037 0.00 0.00 39.76 3.16
2083 2572 5.236911 AGCAAACAATAATTGTGGCAAACTG 59.763 36.000 1.39 0.00 44.59 3.16
2097 2586 3.222173 AGGTGTGTCCAGCAAACAATA 57.778 42.857 0.00 0.00 41.60 1.90
2172 2664 6.062258 ACTGCCTAGCTCAAAAGGTATAAA 57.938 37.500 2.26 0.00 35.06 1.40
2178 2670 1.200948 GCAACTGCCTAGCTCAAAAGG 59.799 52.381 0.00 0.00 35.86 3.11
2203 2695 8.494347 GTGCTCTAAAAGATATATGTGAAGCAG 58.506 37.037 0.00 0.00 0.00 4.24
2212 2704 4.021368 ACCGCCGTGCTCTAAAAGATATAT 60.021 41.667 0.00 0.00 0.00 0.86
2256 2748 6.691754 TTAAGTGAAACATGAGAGTGCAAA 57.308 33.333 0.00 0.00 41.43 3.68
2296 2789 8.227791 CCGTGCATATTACCACTTCATATTTAC 58.772 37.037 0.00 0.00 0.00 2.01
2302 2796 3.118038 ACCCGTGCATATTACCACTTCAT 60.118 43.478 0.00 0.00 0.00 2.57
2305 2799 3.359695 AACCCGTGCATATTACCACTT 57.640 42.857 0.00 0.00 0.00 3.16
2340 2835 4.415512 TCCCCCTTGAATACCTATCCTTTG 59.584 45.833 0.00 0.00 0.00 2.77
2538 3051 5.808042 ACATCACTCAGGAATTTCAATCG 57.192 39.130 0.00 0.00 0.00 3.34
2550 3064 5.928264 TGCATCCGATTATAACATCACTCAG 59.072 40.000 0.00 0.00 0.00 3.35
2581 3097 6.008331 GGAAATTGGTTGGTAGGAGTTAACT 58.992 40.000 8.13 8.13 0.00 2.24
2612 3128 4.095334 TCGAAGCAAAGTACTACTCGCATA 59.905 41.667 0.00 0.00 0.00 3.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.