Multiple sequence alignment - TraesCS2A01G046300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G046300 chr2A 100.000 6416 0 0 1 6416 18067325 18073740 0.000000e+00 11849.0
1 TraesCS2A01G046300 chr2A 91.438 2768 164 36 3041 5767 18163112 18165847 0.000000e+00 3731.0
2 TraesCS2A01G046300 chr2A 93.451 397 19 3 1243 1638 18156983 18157373 3.330000e-162 582.0
3 TraesCS2A01G046300 chr2A 85.426 446 38 17 2064 2502 18159184 18159609 7.640000e-119 438.0
4 TraesCS2A01G046300 chr2A 88.739 222 15 4 5767 5984 18173867 18174082 4.930000e-66 263.0
5 TraesCS2A01G046300 chr2A 89.655 203 19 1 1674 1876 18157443 18157643 2.300000e-64 257.0
6 TraesCS2A01G046300 chr2A 91.429 105 5 3 1971 2075 18157663 18157763 2.410000e-29 141.0
7 TraesCS2A01G046300 chrUn 91.352 3261 194 45 2822 6032 24312733 24315955 0.000000e+00 4379.0
8 TraesCS2A01G046300 chrUn 91.352 3261 194 45 2822 6032 24357769 24354547 0.000000e+00 4379.0
9 TraesCS2A01G046300 chrUn 94.833 1316 39 10 1667 2979 24311659 24312948 0.000000e+00 2026.0
10 TraesCS2A01G046300 chrUn 94.833 1316 39 10 1667 2979 24358843 24357554 0.000000e+00 2026.0
11 TraesCS2A01G046300 chrUn 88.434 1686 107 35 14 1652 24309890 24311534 0.000000e+00 1953.0
12 TraesCS2A01G046300 chrUn 88.434 1686 107 35 14 1652 24360612 24358968 0.000000e+00 1953.0
13 TraesCS2A01G046300 chrUn 90.196 153 9 4 5869 6021 288298034 288298180 1.830000e-45 195.0
14 TraesCS2A01G046300 chrUn 90.196 153 9 4 5869 6021 293842851 293842997 1.830000e-45 195.0
15 TraesCS2A01G046300 chr2B 91.251 3246 177 54 2818 6019 28421226 28424408 0.000000e+00 4322.0
16 TraesCS2A01G046300 chr2B 89.262 3008 190 64 22 2979 28418496 28421420 0.000000e+00 3642.0
17 TraesCS2A01G046300 chr2B 89.506 162 11 3 5871 6032 28471533 28471688 3.920000e-47 200.0
18 TraesCS2A01G046300 chr2B 89.610 77 8 0 2764 2840 28421279 28421355 1.470000e-16 99.0
19 TraesCS2A01G046300 chr2B 94.444 36 2 0 4749 4784 37012569 37012534 8.990000e-04 56.5
20 TraesCS2A01G046300 chr1D 95.812 191 8 0 6034 6224 423611991 423612181 6.250000e-80 309.0
21 TraesCS2A01G046300 chr6B 95.161 186 7 2 6233 6416 198516640 198516825 6.290000e-75 292.0
22 TraesCS2A01G046300 chr6B 95.082 183 6 3 6236 6416 222520050 222520231 1.050000e-72 285.0
23 TraesCS2A01G046300 chr6B 95.082 183 6 3 6236 6416 268686326 268686507 1.050000e-72 285.0
24 TraesCS2A01G046300 chr3D 94.709 189 7 2 6231 6416 469844248 469844436 2.260000e-74 291.0
25 TraesCS2A01G046300 chr3D 95.055 182 8 1 6236 6416 546607942 546608123 1.050000e-72 285.0
26 TraesCS2A01G046300 chr3D 91.623 191 16 0 6034 6224 202376125 202376315 1.370000e-66 265.0
27 TraesCS2A01G046300 chr2D 95.055 182 8 1 6236 6416 259061876 259062057 1.050000e-72 285.0
28 TraesCS2A01G046300 chr2D 92.308 182 14 0 6043 6224 508065916 508066097 6.380000e-65 259.0
29 TraesCS2A01G046300 chr2D 80.405 148 25 4 1248 1393 524152353 524152498 6.800000e-20 110.0
30 TraesCS2A01G046300 chr1A 94.118 187 9 2 6232 6416 168585190 168585004 3.790000e-72 283.0
31 TraesCS2A01G046300 chr1A 90.052 191 19 0 6034 6224 551517575 551517765 1.380000e-61 248.0
32 TraesCS2A01G046300 chr1A 89.529 191 20 0 6034 6224 568525967 568525777 6.430000e-60 243.0
33 TraesCS2A01G046300 chr4D 94.086 186 9 1 6231 6416 77810633 77810816 1.360000e-71 281.0
34 TraesCS2A01G046300 chr4D 93.333 150 10 0 1247 1396 62733743 62733594 8.370000e-54 222.0
35 TraesCS2A01G046300 chr4A 94.054 185 9 2 6233 6416 373381986 373381803 4.900000e-71 279.0
36 TraesCS2A01G046300 chr4A 91.275 149 13 0 1245 1393 534230182 534230330 3.030000e-48 204.0
37 TraesCS2A01G046300 chr7A 90.476 189 18 0 6034 6222 299477393 299477581 3.840000e-62 250.0
38 TraesCS2A01G046300 chr7D 90.052 191 17 2 6034 6224 591977594 591977406 4.970000e-61 246.0
39 TraesCS2A01G046300 chr1B 89.529 191 20 0 6034 6224 646591302 646591492 6.430000e-60 243.0
40 TraesCS2A01G046300 chr1B 88.542 192 20 2 6034 6224 646486682 646486872 1.390000e-56 231.0
41 TraesCS2A01G046300 chr6D 90.625 160 14 1 1245 1404 13971087 13970929 1.810000e-50 211.0
42 TraesCS2A01G046300 chr6D 85.535 159 23 0 1449 1607 13970796 13970638 3.980000e-37 167.0
43 TraesCS2A01G046300 chr4B 90.132 152 15 0 1245 1396 89466428 89466277 1.410000e-46 198.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G046300 chr2A 18067325 18073740 6415 False 11849.000000 11849 100.000000 1 6416 1 chr2A.!!$F1 6415
1 TraesCS2A01G046300 chr2A 18156983 18165847 8864 False 1029.800000 3731 90.279800 1243 5767 5 chr2A.!!$F3 4524
2 TraesCS2A01G046300 chrUn 24309890 24315955 6065 False 2786.000000 4379 91.539667 14 6032 3 chrUn.!!$F3 6018
3 TraesCS2A01G046300 chrUn 24354547 24360612 6065 True 2786.000000 4379 91.539667 14 6032 3 chrUn.!!$R1 6018
4 TraesCS2A01G046300 chr2B 28418496 28424408 5912 False 2687.666667 4322 90.041000 22 6019 3 chr2B.!!$F2 5997

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
297 308 0.112412 AACCTCCATCACCACCAACC 59.888 55.000 0.00 0.00 0.00 3.77 F
1205 1276 0.394899 ATTTACCTCCAGCCAGCTGC 60.395 55.000 14.26 3.91 42.35 5.25 F
2980 4636 0.178995 TCAAAGCTGTCCATGTGCCA 60.179 50.000 0.00 0.00 0.00 4.92 F
2981 4637 0.675083 CAAAGCTGTCCATGTGCCAA 59.325 50.000 0.00 0.00 0.00 4.52 F
3706 8779 1.000171 AGCTTTGCCTTACTTTGCTGC 60.000 47.619 0.00 0.00 0.00 5.25 F
3707 8780 1.000171 GCTTTGCCTTACTTTGCTGCT 60.000 47.619 0.00 0.00 0.00 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2282 3912 1.605710 GCGCATAGGTGATTGAGCAAT 59.394 47.619 0.30 0.00 38.36 3.56 R
3014 4670 1.269726 CGAATTTGGCAGCCAACAACT 60.270 47.619 27.40 11.08 43.82 3.16 R
3958 9035 0.742990 TCTACTGCAATTTCGGGGCG 60.743 55.000 0.00 0.00 0.00 6.13 R
4980 10090 0.396139 GCCAAGCCCTCCATTCATCA 60.396 55.000 0.00 0.00 0.00 3.07 R
5376 10489 0.607762 TCCAACGCCTAAGCATTGCA 60.608 50.000 11.91 0.00 40.80 4.08 R
5627 10744 1.410153 ACCTTGTCGTTACCTTGTCGT 59.590 47.619 0.00 0.00 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 1.362355 CCAAAGCCGGTGAACCAAC 59.638 57.895 1.90 0.00 35.14 3.77
68 69 1.296715 GACCAAGATGCACCGAGGT 59.703 57.895 0.00 0.00 0.00 3.85
87 88 0.907704 TACGCACAGGGGAATCCAGT 60.908 55.000 0.09 0.00 38.24 4.00
138 140 1.413077 CCTGTACTAGCAACTAGGCCC 59.587 57.143 0.00 0.00 38.30 5.80
139 141 2.108168 CTGTACTAGCAACTAGGCCCA 58.892 52.381 0.00 0.00 38.30 5.36
212 220 4.121446 TCCCCATCATATATGGCCATTCT 58.879 43.478 26.37 14.51 37.85 2.40
218 226 7.202158 CCCATCATATATGGCCATTCTAGATCA 60.202 40.741 26.37 2.68 37.85 2.92
226 234 4.079844 TGGCCATTCTAGATCATGAACCAA 60.080 41.667 0.00 0.00 0.00 3.67
230 239 4.778213 TTCTAGATCATGAACCAAGGGG 57.222 45.455 0.00 0.00 41.29 4.79
239 249 0.394899 GAACCAAGGGGAGCCTCATG 60.395 60.000 0.00 0.00 38.05 3.07
256 266 1.100463 ATGTGTGCAAGTCAACGCCA 61.100 50.000 0.00 0.00 0.00 5.69
286 297 1.208052 CCATGACGAGTCAACCTCCAT 59.792 52.381 10.15 0.00 43.58 3.41
292 303 1.673033 CGAGTCAACCTCCATCACCAC 60.673 57.143 0.00 0.00 36.82 4.16
297 308 0.112412 AACCTCCATCACCACCAACC 59.888 55.000 0.00 0.00 0.00 3.77
319 330 2.047655 GACGCCATCCGGTCACAA 60.048 61.111 0.00 0.00 42.52 3.33
336 348 5.215160 GTCACAACATCAAATCAACACTCC 58.785 41.667 0.00 0.00 0.00 3.85
356 368 2.203788 TGGTGGAGAGCCCGAACT 60.204 61.111 0.00 0.00 37.93 3.01
360 372 3.706373 GGAGAGCCCGAACTGCCA 61.706 66.667 0.00 0.00 0.00 4.92
441 453 2.360767 ACCGTGCCGCCACCTATAA 61.361 57.895 0.00 0.00 38.79 0.98
452 464 2.861360 GCCACCTATAACGATCGACACC 60.861 54.545 24.34 0.00 0.00 4.16
453 465 2.359848 CCACCTATAACGATCGACACCA 59.640 50.000 24.34 1.66 0.00 4.17
557 577 0.976073 CCACCCCACTACCGACATCT 60.976 60.000 0.00 0.00 0.00 2.90
568 588 4.571250 GACATCTCGTCGCACCAA 57.429 55.556 0.00 0.00 34.19 3.67
581 601 1.086696 GCACCAACATGCTATCACGT 58.913 50.000 0.00 0.00 42.62 4.49
623 643 2.285969 ATCCTGGCCCAGCAGTCT 60.286 61.111 4.81 0.00 0.00 3.24
705 755 3.319198 GCCTTCCTCCCCGTCACA 61.319 66.667 0.00 0.00 0.00 3.58
706 756 2.663196 CCTTCCTCCCCGTCACAC 59.337 66.667 0.00 0.00 0.00 3.82
708 758 2.522436 TTCCTCCCCGTCACACGT 60.522 61.111 0.00 0.00 40.58 4.49
710 760 4.373116 CCTCCCCGTCACACGTGG 62.373 72.222 21.57 9.11 40.57 4.94
735 788 4.124126 GGGGGAGGGAGGGGACAT 62.124 72.222 0.00 0.00 0.00 3.06
736 789 2.044620 GGGGAGGGAGGGGACATT 59.955 66.667 0.00 0.00 0.00 2.71
737 790 1.622752 GGGGAGGGAGGGGACATTT 60.623 63.158 0.00 0.00 0.00 2.32
738 791 1.221909 GGGGAGGGAGGGGACATTTT 61.222 60.000 0.00 0.00 0.00 1.82
739 792 0.710588 GGGAGGGAGGGGACATTTTT 59.289 55.000 0.00 0.00 0.00 1.94
781 834 3.911260 TCCCATAAGTTAGACACCAACCA 59.089 43.478 0.00 0.00 0.00 3.67
981 1045 1.154035 CCGGCAGAAATTCAACGGC 60.154 57.895 9.34 2.73 34.54 5.68
1008 1076 2.046285 CGGACAAACCATGGAGGCC 61.046 63.158 21.47 17.91 43.14 5.19
1034 1105 4.467107 GTCCCGGCTCCTCCTCCT 62.467 72.222 0.00 0.00 0.00 3.69
1035 1106 4.144727 TCCCGGCTCCTCCTCCTC 62.145 72.222 0.00 0.00 0.00 3.71
1037 1108 4.150454 CCGGCTCCTCCTCCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
1038 1109 2.520741 CGGCTCCTCCTCCTCCTC 60.521 72.222 0.00 0.00 0.00 3.71
1039 1110 2.123033 GGCTCCTCCTCCTCCTCC 60.123 72.222 0.00 0.00 0.00 4.30
1194 1265 3.153919 TGGAACTGCACCAATTTACCTC 58.846 45.455 0.00 0.00 34.25 3.85
1203 1274 1.341383 CCAATTTACCTCCAGCCAGCT 60.341 52.381 0.00 0.00 0.00 4.24
1204 1275 1.747355 CAATTTACCTCCAGCCAGCTG 59.253 52.381 12.78 12.78 43.26 4.24
1205 1276 0.394899 ATTTACCTCCAGCCAGCTGC 60.395 55.000 14.26 3.91 42.35 5.25
1206 1277 1.778017 TTTACCTCCAGCCAGCTGCA 61.778 55.000 14.26 0.00 44.83 4.41
1428 1501 2.051166 GATCGAGCCCTACGACGC 60.051 66.667 0.00 0.00 42.37 5.19
1701 1892 9.642312 CTAATTTTGTCATCATCGTCAACATAG 57.358 33.333 0.00 0.00 0.00 2.23
1711 1902 9.034544 CATCATCGTCAACATAGTTTTCTGATA 57.965 33.333 0.00 0.00 0.00 2.15
1767 1958 1.542108 CCGAGCATCCAGATTTCCTCC 60.542 57.143 0.00 0.00 0.00 4.30
1866 2060 6.596888 AGGTGCTGCATTATTACTAGCATATG 59.403 38.462 5.27 0.00 44.98 1.78
1906 2100 6.377327 TCCACATTCACTTGAAAGAAAGTC 57.623 37.500 1.38 0.00 38.34 3.01
2233 3863 3.672808 CATATCTTCATGGAGTGGGAGC 58.327 50.000 0.00 0.00 0.00 4.70
2240 3870 1.064166 CATGGAGTGGGAGCCATTTCT 60.064 52.381 0.00 0.00 42.03 2.52
2281 3911 4.699925 TTAGTTACACAAGCTCCCAACT 57.300 40.909 0.00 0.00 0.00 3.16
2282 3912 5.811796 TTAGTTACACAAGCTCCCAACTA 57.188 39.130 0.00 0.00 0.00 2.24
2310 3946 0.970427 TCACCTATGCGCTGACCTGA 60.970 55.000 9.73 0.91 0.00 3.86
2464 4100 4.044065 ACCTTATGACAACCCCAAGAATGA 59.956 41.667 0.00 0.00 0.00 2.57
2477 4113 4.001652 CCAAGAATGATATCTGCGCTCAT 58.998 43.478 9.73 6.06 0.00 2.90
2521 4157 3.944055 AAGCATACGAGTCACTCAACT 57.056 42.857 5.45 0.00 0.00 3.16
2731 4387 5.592054 TGATCTAGTATCTTCGTTTGCCTG 58.408 41.667 0.00 0.00 0.00 4.85
2740 4396 3.692101 TCTTCGTTTGCCTGTCAAAAAGA 59.308 39.130 0.00 0.00 45.35 2.52
2765 4421 9.998106 GACTCCATTTAAAGACTATATGCCTAA 57.002 33.333 0.00 0.00 0.00 2.69
2979 4635 1.180029 ATCAAAGCTGTCCATGTGCC 58.820 50.000 0.00 0.00 0.00 5.01
2980 4636 0.178995 TCAAAGCTGTCCATGTGCCA 60.179 50.000 0.00 0.00 0.00 4.92
2981 4637 0.675083 CAAAGCTGTCCATGTGCCAA 59.325 50.000 0.00 0.00 0.00 4.52
2982 4638 1.068895 CAAAGCTGTCCATGTGCCAAA 59.931 47.619 0.00 0.00 0.00 3.28
2983 4639 1.636148 AAGCTGTCCATGTGCCAAAT 58.364 45.000 0.00 0.00 0.00 2.32
2984 4640 1.636148 AGCTGTCCATGTGCCAAATT 58.364 45.000 0.00 0.00 0.00 1.82
2985 4641 1.547372 AGCTGTCCATGTGCCAAATTC 59.453 47.619 0.00 0.00 0.00 2.17
2986 4642 1.733389 GCTGTCCATGTGCCAAATTCG 60.733 52.381 0.00 0.00 0.00 3.34
2987 4643 1.541147 CTGTCCATGTGCCAAATTCGT 59.459 47.619 0.00 0.00 0.00 3.85
2988 4644 2.746904 CTGTCCATGTGCCAAATTCGTA 59.253 45.455 0.00 0.00 0.00 3.43
2989 4645 2.486203 TGTCCATGTGCCAAATTCGTAC 59.514 45.455 0.00 0.00 0.00 3.67
2990 4646 2.486203 GTCCATGTGCCAAATTCGTACA 59.514 45.455 0.00 0.09 0.00 2.90
2991 4647 3.057876 GTCCATGTGCCAAATTCGTACAA 60.058 43.478 0.00 0.00 29.44 2.41
2992 4648 3.761218 TCCATGTGCCAAATTCGTACAAT 59.239 39.130 0.00 0.00 29.44 2.71
2993 4649 4.219507 TCCATGTGCCAAATTCGTACAATT 59.780 37.500 0.00 0.00 29.44 2.32
2994 4650 4.562394 CCATGTGCCAAATTCGTACAATTC 59.438 41.667 0.00 0.00 29.44 2.17
2995 4651 5.401550 CATGTGCCAAATTCGTACAATTCT 58.598 37.500 0.00 0.00 29.44 2.40
2996 4652 5.446143 TGTGCCAAATTCGTACAATTCTT 57.554 34.783 0.00 0.00 0.00 2.52
2997 4653 5.837437 TGTGCCAAATTCGTACAATTCTTT 58.163 33.333 0.00 0.00 0.00 2.52
2998 4654 6.276847 TGTGCCAAATTCGTACAATTCTTTT 58.723 32.000 0.00 0.00 0.00 2.27
2999 4655 6.758886 TGTGCCAAATTCGTACAATTCTTTTT 59.241 30.769 0.00 0.00 0.00 1.94
3000 4656 7.043059 TGTGCCAAATTCGTACAATTCTTTTTC 60.043 33.333 0.00 0.00 0.00 2.29
3001 4657 7.169140 GTGCCAAATTCGTACAATTCTTTTTCT 59.831 33.333 0.00 0.00 0.00 2.52
3002 4658 8.353684 TGCCAAATTCGTACAATTCTTTTTCTA 58.646 29.630 0.00 0.00 0.00 2.10
3003 4659 9.353999 GCCAAATTCGTACAATTCTTTTTCTAT 57.646 29.630 0.00 0.00 0.00 1.98
3166 8232 5.406175 TGCAGTTGCTTGAAGAAATTTATGC 59.594 36.000 5.62 2.69 42.66 3.14
3215 8281 4.927267 TTATCTGTCTCCCACACCAAAT 57.073 40.909 0.00 0.00 0.00 2.32
3279 8345 2.552155 GCACTGAAACATCCACCACCTA 60.552 50.000 0.00 0.00 0.00 3.08
3280 8346 3.750371 CACTGAAACATCCACCACCTAA 58.250 45.455 0.00 0.00 0.00 2.69
3367 8433 8.667987 TCGCGATGAATAAAAATTATTATGCC 57.332 30.769 3.71 0.00 0.00 4.40
3587 8655 6.072838 ACCACGTTACTAGTACGGATATCATG 60.073 42.308 20.98 12.30 42.99 3.07
3589 8657 7.014115 CACGTTACTAGTACGGATATCATGTC 58.986 42.308 20.98 0.00 42.99 3.06
3601 8669 6.017325 CGGATATCATGTCAATATTTGCACG 58.983 40.000 4.83 0.00 0.00 5.34
3706 8779 1.000171 AGCTTTGCCTTACTTTGCTGC 60.000 47.619 0.00 0.00 0.00 5.25
3707 8780 1.000171 GCTTTGCCTTACTTTGCTGCT 60.000 47.619 0.00 0.00 0.00 4.24
3722 8795 3.415212 TGCTGCTGTTGATTCTAAGCTT 58.585 40.909 3.48 3.48 36.60 3.74
3799 8874 3.771577 ATGGAAGAAAAGTCCGACTGT 57.228 42.857 0.65 0.00 38.06 3.55
3816 8893 1.909302 CTGTGATGACCCTAACCACCT 59.091 52.381 0.00 0.00 0.00 4.00
3829 8906 5.131142 CCCTAACCACCTAACATCTCAGAAT 59.869 44.000 0.00 0.00 0.00 2.40
3843 8920 8.231692 ACATCTCAGAATATAGGTCCATATCG 57.768 38.462 0.00 0.00 0.00 2.92
3844 8921 8.055790 ACATCTCAGAATATAGGTCCATATCGA 58.944 37.037 0.00 0.00 0.00 3.59
3845 8922 7.867305 TCTCAGAATATAGGTCCATATCGAC 57.133 40.000 0.00 0.00 0.00 4.20
3860 8937 1.982612 TCGACGATGAGCAAGAACTG 58.017 50.000 0.00 0.00 0.00 3.16
3937 9014 1.412343 GTTTGAGCAGGAAGGGCAAAA 59.588 47.619 0.00 0.00 31.19 2.44
3958 9035 3.658757 TGCTTAATTTCAACCAGCCAC 57.341 42.857 0.00 0.00 0.00 5.01
3959 9036 2.030363 TGCTTAATTTCAACCAGCCACG 60.030 45.455 0.00 0.00 0.00 4.94
4029 9107 4.738252 ACACGCATATACAACATCACTACG 59.262 41.667 0.00 0.00 0.00 3.51
4030 9108 4.738252 CACGCATATACAACATCACTACGT 59.262 41.667 0.00 0.00 0.00 3.57
4031 9109 5.910723 CACGCATATACAACATCACTACGTA 59.089 40.000 0.00 0.00 0.00 3.57
4032 9110 5.911280 ACGCATATACAACATCACTACGTAC 59.089 40.000 0.00 0.00 0.00 3.67
4148 9235 7.505585 TGAGTCATCAAAAGTTATTTCCCAACT 59.494 33.333 0.00 0.00 33.24 3.16
4178 9265 4.675063 ATTTTTGTCCCATCTACAGGGT 57.325 40.909 0.00 0.00 46.82 4.34
4190 9277 8.639200 TCCCATCTACAGGGTTATATTACCTAT 58.361 37.037 10.58 0.00 46.82 2.57
4317 9405 4.937620 GGCATCTGATGTTCAACACTCTAA 59.062 41.667 18.19 0.00 0.00 2.10
4690 9779 9.836076 GTAAAGGTTGACCAATTTTATAGACAC 57.164 33.333 2.56 0.00 38.89 3.67
4693 9782 7.882179 AGGTTGACCAATTTTATAGACACAAC 58.118 34.615 2.56 0.00 38.89 3.32
4802 9911 9.587772 GTAGATGTGTATATCTCTCTCTCTCTC 57.412 40.741 0.00 0.00 38.35 3.20
4803 9912 8.441311 AGATGTGTATATCTCTCTCTCTCTCT 57.559 38.462 0.00 0.00 31.97 3.10
4890 10000 5.582665 GGAGTATAGTTTTCCAACTGCTCAG 59.417 44.000 13.27 0.00 43.54 3.35
5075 10185 7.065120 TGAATTGGATTCTTCATGTTGGTTT 57.935 32.000 0.00 0.00 39.96 3.27
5246 10356 6.149616 AGGAGACTCTCTTGGAAATATGGAT 58.850 40.000 6.02 0.00 32.90 3.41
5355 10468 2.108157 GGACACACTGCACCGTCA 59.892 61.111 0.00 0.00 0.00 4.35
5376 10489 1.366319 ACCAACCTGAGAGATGCCTT 58.634 50.000 0.00 0.00 0.00 4.35
5431 10544 3.181497 ACTCTGATGTGTTTGTGTGTTGC 60.181 43.478 0.00 0.00 0.00 4.17
5463 10576 0.104120 TGGATAGGGTGAATCGTGCG 59.896 55.000 0.00 0.00 0.00 5.34
5557 10674 9.793259 TTTGGTCTATTTTCTCATCAAGTTAGT 57.207 29.630 0.00 0.00 0.00 2.24
5638 10755 1.600164 CGAACCGACACGACAAGGTAA 60.600 52.381 0.00 0.00 35.68 2.85
5654 10771 3.434309 AGGTAACGACAAGGTTAGGCTA 58.566 45.455 0.00 0.00 46.39 3.93
5657 10774 2.865343 ACGACAAGGTTAGGCTATCG 57.135 50.000 10.48 10.48 0.00 2.92
5724 10842 3.888930 GCTCAGTAGAAGCTCTAGGTCAT 59.111 47.826 0.00 0.00 28.01 3.06
5725 10843 4.261572 GCTCAGTAGAAGCTCTAGGTCATG 60.262 50.000 0.00 0.00 28.01 3.07
5726 10844 5.117406 TCAGTAGAAGCTCTAGGTCATGA 57.883 43.478 0.00 0.00 28.01 3.07
5727 10845 5.510430 TCAGTAGAAGCTCTAGGTCATGAA 58.490 41.667 0.00 0.00 28.01 2.57
5728 10846 5.592282 TCAGTAGAAGCTCTAGGTCATGAAG 59.408 44.000 0.00 0.00 28.01 3.02
5729 10847 5.592282 CAGTAGAAGCTCTAGGTCATGAAGA 59.408 44.000 0.00 0.00 28.01 2.87
5730 10848 5.827797 AGTAGAAGCTCTAGGTCATGAAGAG 59.172 44.000 15.71 15.71 39.81 2.85
5731 10849 4.609301 AGAAGCTCTAGGTCATGAAGAGT 58.391 43.478 19.38 5.56 39.18 3.24
5732 10850 5.022787 AGAAGCTCTAGGTCATGAAGAGTT 58.977 41.667 19.38 13.37 39.18 3.01
5865 10987 2.568956 TCTGAAGTAGGCTCAAGCATGT 59.431 45.455 4.13 0.00 44.36 3.21
5934 11058 0.393448 TAGCAATAATACCGCGGCCA 59.607 50.000 28.58 14.80 0.00 5.36
5937 11061 1.874739 GCAATAATACCGCGGCCACTA 60.875 52.381 28.58 10.87 0.00 2.74
5947 11071 1.669265 CGCGGCCACTATATCTCGATA 59.331 52.381 2.24 0.00 0.00 2.92
6014 11138 0.249073 TTATCAAGCTCGCTCGGCTC 60.249 55.000 5.90 0.00 39.30 4.70
6019 11143 1.364626 AAGCTCGCTCGGCTCATTTG 61.365 55.000 5.90 0.00 39.30 2.32
6020 11144 2.817423 GCTCGCTCGGCTCATTTGG 61.817 63.158 0.00 0.00 0.00 3.28
6021 11145 2.125147 TCGCTCGGCTCATTTGGG 60.125 61.111 0.00 0.00 0.00 4.12
6022 11146 2.125147 CGCTCGGCTCATTTGGGA 60.125 61.111 0.00 0.00 0.00 4.37
6023 11147 1.524621 CGCTCGGCTCATTTGGGAT 60.525 57.895 0.00 0.00 0.00 3.85
6024 11148 0.249868 CGCTCGGCTCATTTGGGATA 60.250 55.000 0.00 0.00 0.00 2.59
6025 11149 1.230324 GCTCGGCTCATTTGGGATAC 58.770 55.000 0.00 0.00 0.00 2.24
6028 11152 3.862642 GCTCGGCTCATTTGGGATACTAG 60.863 52.174 0.00 0.00 0.00 2.57
6029 11153 3.305720 TCGGCTCATTTGGGATACTAGT 58.694 45.455 0.00 0.00 0.00 2.57
6033 11157 5.565045 CGGCTCATTTGGGATACTAGTAGTC 60.565 48.000 5.96 6.32 0.00 2.59
6034 11158 5.279556 GGCTCATTTGGGATACTAGTAGTCC 60.280 48.000 5.96 16.85 0.00 3.85
6035 11159 5.304614 GCTCATTTGGGATACTAGTAGTCCA 59.695 44.000 22.33 20.33 33.62 4.02
6036 11160 6.726490 TCATTTGGGATACTAGTAGTCCAC 57.274 41.667 20.30 14.44 33.62 4.02
6037 11161 5.301045 TCATTTGGGATACTAGTAGTCCACG 59.699 44.000 20.30 14.20 33.62 4.94
6038 11162 3.219176 TGGGATACTAGTAGTCCACGG 57.781 52.381 22.33 0.00 33.62 4.94
6039 11163 2.779430 TGGGATACTAGTAGTCCACGGA 59.221 50.000 22.33 6.09 33.62 4.69
6040 11164 3.145286 GGGATACTAGTAGTCCACGGAC 58.855 54.545 22.33 8.23 44.86 4.79
6041 11165 3.434167 GGGATACTAGTAGTCCACGGACA 60.434 52.174 22.33 1.99 46.76 4.02
6042 11166 4.396522 GGATACTAGTAGTCCACGGACAT 58.603 47.826 18.21 6.44 46.76 3.06
6043 11167 4.826183 GGATACTAGTAGTCCACGGACATT 59.174 45.833 18.21 5.81 46.76 2.71
6044 11168 5.301298 GGATACTAGTAGTCCACGGACATTT 59.699 44.000 18.21 5.48 46.76 2.32
6045 11169 4.451629 ACTAGTAGTCCACGGACATTTG 57.548 45.455 18.21 6.81 46.76 2.32
6046 11170 4.084287 ACTAGTAGTCCACGGACATTTGA 58.916 43.478 18.21 0.00 46.76 2.69
6047 11171 4.525487 ACTAGTAGTCCACGGACATTTGAA 59.475 41.667 18.21 0.00 46.76 2.69
6048 11172 4.345859 AGTAGTCCACGGACATTTGAAA 57.654 40.909 18.21 0.00 46.76 2.69
6049 11173 4.906618 AGTAGTCCACGGACATTTGAAAT 58.093 39.130 18.21 0.00 46.76 2.17
6050 11174 6.045072 AGTAGTCCACGGACATTTGAAATA 57.955 37.500 18.21 0.00 46.76 1.40
6051 11175 6.650120 AGTAGTCCACGGACATTTGAAATAT 58.350 36.000 18.21 0.00 46.76 1.28
6052 11176 7.110155 AGTAGTCCACGGACATTTGAAATATT 58.890 34.615 18.21 0.00 46.76 1.28
6053 11177 6.834168 AGTCCACGGACATTTGAAATATTT 57.166 33.333 18.21 0.00 46.76 1.40
6054 11178 7.227049 AGTCCACGGACATTTGAAATATTTT 57.773 32.000 18.21 0.00 46.76 1.82
6055 11179 7.090173 AGTCCACGGACATTTGAAATATTTTG 58.910 34.615 18.21 0.00 46.76 2.44
6056 11180 5.866633 TCCACGGACATTTGAAATATTTTGC 59.133 36.000 1.43 0.00 0.00 3.68
6057 11181 5.063312 CCACGGACATTTGAAATATTTTGCC 59.937 40.000 1.43 2.53 0.00 4.52
6058 11182 5.636965 CACGGACATTTGAAATATTTTGCCA 59.363 36.000 1.43 0.00 0.00 4.92
6059 11183 6.313411 CACGGACATTTGAAATATTTTGCCAT 59.687 34.615 1.43 0.00 0.00 4.40
6060 11184 7.490725 CACGGACATTTGAAATATTTTGCCATA 59.509 33.333 1.43 0.00 0.00 2.74
6061 11185 8.037758 ACGGACATTTGAAATATTTTGCCATAA 58.962 29.630 1.43 0.00 0.00 1.90
6062 11186 9.044150 CGGACATTTGAAATATTTTGCCATAAT 57.956 29.630 1.43 0.00 0.00 1.28
6064 11188 9.654417 GACATTTGAAATATTTTGCCATAATGC 57.346 29.630 1.43 3.68 0.00 3.56
6065 11189 9.175312 ACATTTGAAATATTTTGCCATAATGCA 57.825 25.926 1.43 0.00 40.07 3.96
6068 11192 8.734218 TTGAAATATTTTGCCATAATGCATGT 57.266 26.923 0.00 0.00 41.70 3.21
6069 11193 8.734218 TGAAATATTTTGCCATAATGCATGTT 57.266 26.923 0.00 0.00 41.70 2.71
6070 11194 8.613482 TGAAATATTTTGCCATAATGCATGTTG 58.387 29.630 0.00 0.52 41.70 3.33
6071 11195 8.734218 AAATATTTTGCCATAATGCATGTTGA 57.266 26.923 0.00 0.00 41.70 3.18
6072 11196 8.734218 AATATTTTGCCATAATGCATGTTGAA 57.266 26.923 0.00 0.00 41.70 2.69
6073 11197 8.911918 ATATTTTGCCATAATGCATGTTGAAT 57.088 26.923 0.00 0.24 41.70 2.57
6074 11198 7.633193 ATTTTGCCATAATGCATGTTGAATT 57.367 28.000 0.00 0.00 41.70 2.17
6075 11199 7.450124 TTTTGCCATAATGCATGTTGAATTT 57.550 28.000 0.00 0.00 41.70 1.82
6076 11200 7.450124 TTTGCCATAATGCATGTTGAATTTT 57.550 28.000 0.00 0.00 41.70 1.82
6077 11201 8.557592 TTTGCCATAATGCATGTTGAATTTTA 57.442 26.923 0.00 0.00 41.70 1.52
6078 11202 7.536895 TGCCATAATGCATGTTGAATTTTAC 57.463 32.000 0.00 0.00 36.04 2.01
6079 11203 7.101700 TGCCATAATGCATGTTGAATTTTACA 58.898 30.769 0.00 0.00 36.04 2.41
6080 11204 7.769507 TGCCATAATGCATGTTGAATTTTACAT 59.230 29.630 0.00 1.71 36.04 2.29
6129 11253 9.430399 AAAATATCATCCAAATCCATCACTTCT 57.570 29.630 0.00 0.00 0.00 2.85
6130 11254 9.430399 AAATATCATCCAAATCCATCACTTCTT 57.570 29.630 0.00 0.00 0.00 2.52
6133 11257 8.632906 ATCATCCAAATCCATCACTTCTTATC 57.367 34.615 0.00 0.00 0.00 1.75
6134 11258 7.809238 TCATCCAAATCCATCACTTCTTATCT 58.191 34.615 0.00 0.00 0.00 1.98
6135 11259 7.935755 TCATCCAAATCCATCACTTCTTATCTC 59.064 37.037 0.00 0.00 0.00 2.75
6136 11260 7.443302 TCCAAATCCATCACTTCTTATCTCT 57.557 36.000 0.00 0.00 0.00 3.10
6137 11261 8.553085 TCCAAATCCATCACTTCTTATCTCTA 57.447 34.615 0.00 0.00 0.00 2.43
6138 11262 9.163894 TCCAAATCCATCACTTCTTATCTCTAT 57.836 33.333 0.00 0.00 0.00 1.98
6139 11263 9.434420 CCAAATCCATCACTTCTTATCTCTATC 57.566 37.037 0.00 0.00 0.00 2.08
6140 11264 9.138062 CAAATCCATCACTTCTTATCTCTATCG 57.862 37.037 0.00 0.00 0.00 2.92
6141 11265 8.642935 AATCCATCACTTCTTATCTCTATCGA 57.357 34.615 0.00 0.00 0.00 3.59
6142 11266 8.642935 ATCCATCACTTCTTATCTCTATCGAA 57.357 34.615 0.00 0.00 0.00 3.71
6143 11267 7.877003 TCCATCACTTCTTATCTCTATCGAAC 58.123 38.462 0.00 0.00 0.00 3.95
6144 11268 7.502561 TCCATCACTTCTTATCTCTATCGAACA 59.497 37.037 0.00 0.00 0.00 3.18
6145 11269 8.138074 CCATCACTTCTTATCTCTATCGAACAA 58.862 37.037 0.00 0.00 0.00 2.83
6146 11270 9.521503 CATCACTTCTTATCTCTATCGAACAAA 57.478 33.333 0.00 0.00 0.00 2.83
6148 11272 9.574458 TCACTTCTTATCTCTATCGAACAAAAG 57.426 33.333 0.00 0.00 0.00 2.27
6149 11273 9.360093 CACTTCTTATCTCTATCGAACAAAAGT 57.640 33.333 0.00 0.00 0.00 2.66
6150 11274 9.360093 ACTTCTTATCTCTATCGAACAAAAGTG 57.640 33.333 0.00 0.00 0.00 3.16
6151 11275 8.703604 TTCTTATCTCTATCGAACAAAAGTGG 57.296 34.615 0.00 0.00 0.00 4.00
6152 11276 8.063200 TCTTATCTCTATCGAACAAAAGTGGA 57.937 34.615 0.00 0.00 0.00 4.02
6153 11277 8.528643 TCTTATCTCTATCGAACAAAAGTGGAA 58.471 33.333 0.00 0.00 0.00 3.53
6154 11278 9.319143 CTTATCTCTATCGAACAAAAGTGGAAT 57.681 33.333 0.00 0.00 0.00 3.01
6157 11281 9.667107 ATCTCTATCGAACAAAAGTGGAATAAA 57.333 29.630 0.00 0.00 0.00 1.40
6158 11282 9.667107 TCTCTATCGAACAAAAGTGGAATAAAT 57.333 29.630 0.00 0.00 0.00 1.40
6232 11356 8.310406 TGTGAGACTAACACAACATCTTTATG 57.690 34.615 0.00 0.00 43.73 1.90
6233 11357 7.387673 TGTGAGACTAACACAACATCTTTATGG 59.612 37.037 0.00 0.00 43.73 2.74
6234 11358 6.878923 TGAGACTAACACAACATCTTTATGGG 59.121 38.462 0.00 0.00 37.43 4.00
6235 11359 7.016153 AGACTAACACAACATCTTTATGGGA 57.984 36.000 0.00 0.00 37.43 4.37
6236 11360 7.458397 AGACTAACACAACATCTTTATGGGAA 58.542 34.615 0.00 0.00 37.43 3.97
6237 11361 8.109634 AGACTAACACAACATCTTTATGGGAAT 58.890 33.333 0.00 0.00 37.43 3.01
6238 11362 8.650143 ACTAACACAACATCTTTATGGGAATT 57.350 30.769 0.00 0.00 37.43 2.17
6239 11363 9.088987 ACTAACACAACATCTTTATGGGAATTT 57.911 29.630 0.00 0.00 37.43 1.82
6240 11364 9.927668 CTAACACAACATCTTTATGGGAATTTT 57.072 29.630 0.00 0.00 37.43 1.82
6263 11387 4.519540 TTTTGCCACTCTAGATTTTGCC 57.480 40.909 0.00 0.00 0.00 4.52
6264 11388 2.877097 TGCCACTCTAGATTTTGCCA 57.123 45.000 0.00 0.00 0.00 4.92
6265 11389 3.153369 TGCCACTCTAGATTTTGCCAA 57.847 42.857 0.00 0.00 0.00 4.52
6266 11390 3.700538 TGCCACTCTAGATTTTGCCAAT 58.299 40.909 0.00 0.00 0.00 3.16
6267 11391 4.088634 TGCCACTCTAGATTTTGCCAATT 58.911 39.130 0.00 0.00 0.00 2.32
6268 11392 4.527816 TGCCACTCTAGATTTTGCCAATTT 59.472 37.500 0.00 0.00 0.00 1.82
6269 11393 5.105063 GCCACTCTAGATTTTGCCAATTTC 58.895 41.667 0.00 0.00 0.00 2.17
6270 11394 5.654497 CCACTCTAGATTTTGCCAATTTCC 58.346 41.667 0.00 0.00 0.00 3.13
6271 11395 5.394553 CCACTCTAGATTTTGCCAATTTCCC 60.395 44.000 0.00 0.00 0.00 3.97
6272 11396 5.420104 CACTCTAGATTTTGCCAATTTCCCT 59.580 40.000 0.00 0.00 0.00 4.20
6273 11397 6.019108 ACTCTAGATTTTGCCAATTTCCCTT 58.981 36.000 0.00 0.00 0.00 3.95
6274 11398 7.122650 CACTCTAGATTTTGCCAATTTCCCTTA 59.877 37.037 0.00 0.00 0.00 2.69
6275 11399 7.841222 ACTCTAGATTTTGCCAATTTCCCTTAT 59.159 33.333 0.00 0.00 0.00 1.73
6276 11400 8.010733 TCTAGATTTTGCCAATTTCCCTTATG 57.989 34.615 0.00 0.00 0.00 1.90
6277 11401 5.430886 AGATTTTGCCAATTTCCCTTATGC 58.569 37.500 0.00 0.00 0.00 3.14
6278 11402 3.625649 TTTGCCAATTTCCCTTATGCC 57.374 42.857 0.00 0.00 0.00 4.40
6279 11403 2.244486 TGCCAATTTCCCTTATGCCA 57.756 45.000 0.00 0.00 0.00 4.92
6280 11404 1.830477 TGCCAATTTCCCTTATGCCAC 59.170 47.619 0.00 0.00 0.00 5.01
6281 11405 2.110578 GCCAATTTCCCTTATGCCACT 58.889 47.619 0.00 0.00 0.00 4.00
6282 11406 2.101415 GCCAATTTCCCTTATGCCACTC 59.899 50.000 0.00 0.00 0.00 3.51
6283 11407 3.635591 CCAATTTCCCTTATGCCACTCT 58.364 45.455 0.00 0.00 0.00 3.24
6284 11408 4.792068 CCAATTTCCCTTATGCCACTCTA 58.208 43.478 0.00 0.00 0.00 2.43
6285 11409 4.823989 CCAATTTCCCTTATGCCACTCTAG 59.176 45.833 0.00 0.00 0.00 2.43
6286 11410 5.397899 CCAATTTCCCTTATGCCACTCTAGA 60.398 44.000 0.00 0.00 0.00 2.43
6287 11411 6.302269 CAATTTCCCTTATGCCACTCTAGAT 58.698 40.000 0.00 0.00 0.00 1.98
6288 11412 5.975988 TTTCCCTTATGCCACTCTAGATT 57.024 39.130 0.00 0.00 0.00 2.40
6289 11413 5.975988 TTCCCTTATGCCACTCTAGATTT 57.024 39.130 0.00 0.00 0.00 2.17
6290 11414 5.975988 TCCCTTATGCCACTCTAGATTTT 57.024 39.130 0.00 0.00 0.00 1.82
6291 11415 5.684704 TCCCTTATGCCACTCTAGATTTTG 58.315 41.667 0.00 0.00 0.00 2.44
6292 11416 5.428457 TCCCTTATGCCACTCTAGATTTTGA 59.572 40.000 0.00 0.00 0.00 2.69
6293 11417 5.529060 CCCTTATGCCACTCTAGATTTTGAC 59.471 44.000 0.00 0.00 0.00 3.18
6294 11418 6.115446 CCTTATGCCACTCTAGATTTTGACA 58.885 40.000 0.00 0.00 0.00 3.58
6295 11419 6.769822 CCTTATGCCACTCTAGATTTTGACAT 59.230 38.462 0.00 0.00 0.00 3.06
6296 11420 7.284034 CCTTATGCCACTCTAGATTTTGACATT 59.716 37.037 0.00 0.00 0.00 2.71
6297 11421 8.579850 TTATGCCACTCTAGATTTTGACATTT 57.420 30.769 0.00 0.00 0.00 2.32
6298 11422 6.500684 TGCCACTCTAGATTTTGACATTTC 57.499 37.500 0.00 0.00 0.00 2.17
6299 11423 6.003326 TGCCACTCTAGATTTTGACATTTCA 58.997 36.000 0.00 0.00 0.00 2.69
6300 11424 6.072508 TGCCACTCTAGATTTTGACATTTCAC 60.073 38.462 0.00 0.00 0.00 3.18
6301 11425 6.150140 GCCACTCTAGATTTTGACATTTCACT 59.850 38.462 0.00 0.00 0.00 3.41
6302 11426 7.308830 GCCACTCTAGATTTTGACATTTCACTT 60.309 37.037 0.00 0.00 0.00 3.16
6303 11427 8.571336 CCACTCTAGATTTTGACATTTCACTTT 58.429 33.333 0.00 0.00 0.00 2.66
6304 11428 9.956720 CACTCTAGATTTTGACATTTCACTTTT 57.043 29.630 0.00 0.00 0.00 2.27
6305 11429 9.956720 ACTCTAGATTTTGACATTTCACTTTTG 57.043 29.630 0.00 0.00 0.00 2.44
6306 11430 8.801715 TCTAGATTTTGACATTTCACTTTTGC 57.198 30.769 0.00 0.00 0.00 3.68
6307 11431 8.632679 TCTAGATTTTGACATTTCACTTTTGCT 58.367 29.630 0.00 0.00 0.00 3.91
6308 11432 9.897744 CTAGATTTTGACATTTCACTTTTGCTA 57.102 29.630 0.00 0.00 0.00 3.49
6309 11433 8.579682 AGATTTTGACATTTCACTTTTGCTAC 57.420 30.769 0.00 0.00 0.00 3.58
6310 11434 8.416329 AGATTTTGACATTTCACTTTTGCTACT 58.584 29.630 0.00 0.00 0.00 2.57
6311 11435 7.985634 TTTTGACATTTCACTTTTGCTACTC 57.014 32.000 0.00 0.00 0.00 2.59
6312 11436 6.942532 TTGACATTTCACTTTTGCTACTCT 57.057 33.333 0.00 0.00 0.00 3.24
6313 11437 6.942532 TGACATTTCACTTTTGCTACTCTT 57.057 33.333 0.00 0.00 0.00 2.85
6314 11438 8.445275 TTGACATTTCACTTTTGCTACTCTTA 57.555 30.769 0.00 0.00 0.00 2.10
6315 11439 8.087982 TGACATTTCACTTTTGCTACTCTTAG 57.912 34.615 0.00 0.00 0.00 2.18
6316 11440 7.715249 TGACATTTCACTTTTGCTACTCTTAGT 59.285 33.333 0.00 0.00 0.00 2.24
6317 11441 8.451908 ACATTTCACTTTTGCTACTCTTAGTT 57.548 30.769 0.00 0.00 0.00 2.24
6318 11442 8.903820 ACATTTCACTTTTGCTACTCTTAGTTT 58.096 29.630 0.00 0.00 0.00 2.66
6319 11443 9.736023 CATTTCACTTTTGCTACTCTTAGTTTT 57.264 29.630 0.00 0.00 0.00 2.43
6321 11445 9.567848 TTTCACTTTTGCTACTCTTAGTTTTTG 57.432 29.630 0.00 0.00 0.00 2.44
6322 11446 8.500753 TCACTTTTGCTACTCTTAGTTTTTGA 57.499 30.769 0.00 0.00 0.00 2.69
6323 11447 8.395633 TCACTTTTGCTACTCTTAGTTTTTGAC 58.604 33.333 0.00 0.00 0.00 3.18
6324 11448 8.181573 CACTTTTGCTACTCTTAGTTTTTGACA 58.818 33.333 0.00 0.00 0.00 3.58
6325 11449 8.736244 ACTTTTGCTACTCTTAGTTTTTGACAA 58.264 29.630 0.00 0.00 0.00 3.18
6326 11450 9.736023 CTTTTGCTACTCTTAGTTTTTGACAAT 57.264 29.630 0.00 0.00 0.00 2.71
6338 11462 7.566858 AGTTTTTGACAATTATCACAATCGC 57.433 32.000 0.00 0.00 0.00 4.58
6339 11463 6.586082 AGTTTTTGACAATTATCACAATCGCC 59.414 34.615 0.00 0.00 0.00 5.54
6340 11464 5.635417 TTTGACAATTATCACAATCGCCA 57.365 34.783 0.00 0.00 0.00 5.69
6341 11465 5.833406 TTGACAATTATCACAATCGCCAT 57.167 34.783 0.00 0.00 0.00 4.40
6342 11466 5.833406 TGACAATTATCACAATCGCCATT 57.167 34.783 0.00 0.00 0.00 3.16
6343 11467 6.206395 TGACAATTATCACAATCGCCATTT 57.794 33.333 0.00 0.00 0.00 2.32
6344 11468 6.264832 TGACAATTATCACAATCGCCATTTC 58.735 36.000 0.00 0.00 0.00 2.17
6345 11469 5.591099 ACAATTATCACAATCGCCATTTCC 58.409 37.500 0.00 0.00 0.00 3.13
6346 11470 3.961477 TTATCACAATCGCCATTTCCG 57.039 42.857 0.00 0.00 0.00 4.30
6347 11471 1.750193 ATCACAATCGCCATTTCCGT 58.250 45.000 0.00 0.00 0.00 4.69
6348 11472 0.801872 TCACAATCGCCATTTCCGTG 59.198 50.000 0.00 0.00 0.00 4.94
6349 11473 0.179166 CACAATCGCCATTTCCGTGG 60.179 55.000 0.00 0.00 42.35 4.94
6356 11480 2.826277 CCATTTCCGTGGCAAAAGC 58.174 52.632 0.00 0.00 31.43 3.51
6357 11481 0.033228 CCATTTCCGTGGCAAAAGCA 59.967 50.000 0.00 0.00 31.43 3.91
6358 11482 1.539929 CCATTTCCGTGGCAAAAGCAA 60.540 47.619 0.00 0.00 31.43 3.91
6359 11483 2.208431 CATTTCCGTGGCAAAAGCAAA 58.792 42.857 0.00 0.00 0.00 3.68
6360 11484 2.386661 TTTCCGTGGCAAAAGCAAAA 57.613 40.000 0.00 0.00 0.00 2.44
6361 11485 2.611225 TTCCGTGGCAAAAGCAAAAT 57.389 40.000 0.00 0.00 0.00 1.82
6362 11486 2.611225 TCCGTGGCAAAAGCAAAATT 57.389 40.000 0.00 0.00 0.00 1.82
6363 11487 2.911484 TCCGTGGCAAAAGCAAAATTT 58.089 38.095 0.00 0.00 0.00 1.82
6364 11488 3.274288 TCCGTGGCAAAAGCAAAATTTT 58.726 36.364 0.00 0.00 32.65 1.82
6365 11489 3.311048 TCCGTGGCAAAAGCAAAATTTTC 59.689 39.130 0.00 0.00 30.01 2.29
6366 11490 3.064545 CCGTGGCAAAAGCAAAATTTTCA 59.935 39.130 0.00 0.00 30.01 2.69
6367 11491 4.273274 CGTGGCAAAAGCAAAATTTTCAG 58.727 39.130 0.00 0.00 30.01 3.02
6368 11492 4.033817 CGTGGCAAAAGCAAAATTTTCAGA 59.966 37.500 0.00 0.00 30.01 3.27
6369 11493 5.504392 GTGGCAAAAGCAAAATTTTCAGAG 58.496 37.500 0.00 0.00 30.01 3.35
6370 11494 5.065090 GTGGCAAAAGCAAAATTTTCAGAGT 59.935 36.000 0.00 0.00 30.01 3.24
6371 11495 5.064962 TGGCAAAAGCAAAATTTTCAGAGTG 59.935 36.000 0.00 0.00 30.01 3.51
6372 11496 5.294060 GGCAAAAGCAAAATTTTCAGAGTGA 59.706 36.000 0.00 0.00 30.01 3.41
6373 11497 6.017687 GGCAAAAGCAAAATTTTCAGAGTGAT 60.018 34.615 0.00 0.00 30.01 3.06
6374 11498 7.171337 GGCAAAAGCAAAATTTTCAGAGTGATA 59.829 33.333 0.00 0.00 30.01 2.15
6375 11499 8.550376 GCAAAAGCAAAATTTTCAGAGTGATAA 58.450 29.630 0.00 0.00 30.01 1.75
6379 11503 9.768662 AAGCAAAATTTTCAGAGTGATAATTGT 57.231 25.926 0.00 0.00 37.82 2.71
6380 11504 9.199982 AGCAAAATTTTCAGAGTGATAATTGTG 57.800 29.630 14.10 14.10 41.66 3.33
6381 11505 9.195411 GCAAAATTTTCAGAGTGATAATTGTGA 57.805 29.630 19.17 0.00 41.46 3.58
6390 11514 9.889128 TCAGAGTGATAATTGTGATACATTTCA 57.111 29.630 0.00 0.00 0.00 2.69
6402 11526 8.621532 TGTGATACATTTCAAAAGCTAAGAGT 57.378 30.769 0.00 0.00 0.00 3.24
6403 11527 8.506437 TGTGATACATTTCAAAAGCTAAGAGTG 58.494 33.333 0.00 0.00 0.00 3.51
6404 11528 7.965107 GTGATACATTTCAAAAGCTAAGAGTGG 59.035 37.037 0.00 0.00 0.00 4.00
6405 11529 5.126396 ACATTTCAAAAGCTAAGAGTGGC 57.874 39.130 0.00 0.00 0.00 5.01
6406 11530 4.584325 ACATTTCAAAAGCTAAGAGTGGCA 59.416 37.500 0.00 0.00 32.62 4.92
6407 11531 5.068987 ACATTTCAAAAGCTAAGAGTGGCAA 59.931 36.000 0.00 0.00 32.62 4.52
6408 11532 5.590530 TTTCAAAAGCTAAGAGTGGCAAA 57.409 34.783 0.00 0.00 32.62 3.68
6409 11533 5.590530 TTCAAAAGCTAAGAGTGGCAAAA 57.409 34.783 0.00 0.00 32.62 2.44
6410 11534 5.590530 TCAAAAGCTAAGAGTGGCAAAAA 57.409 34.783 0.00 0.00 32.62 1.94
6411 11535 6.160576 TCAAAAGCTAAGAGTGGCAAAAAT 57.839 33.333 0.00 0.00 32.62 1.82
6412 11536 5.984926 TCAAAAGCTAAGAGTGGCAAAAATG 59.015 36.000 0.00 0.00 32.62 2.32
6413 11537 5.789643 AAAGCTAAGAGTGGCAAAAATGA 57.210 34.783 0.00 0.00 32.62 2.57
6414 11538 5.789643 AAGCTAAGAGTGGCAAAAATGAA 57.210 34.783 0.00 0.00 32.62 2.57
6415 11539 5.789643 AGCTAAGAGTGGCAAAAATGAAA 57.210 34.783 0.00 0.00 32.62 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.083774 GTTCGCTCATTGGTCAATGGA 58.916 47.619 19.67 9.47 46.08 3.41
1 2 1.811965 TGTTCGCTCATTGGTCAATGG 59.188 47.619 19.67 13.07 46.08 3.16
3 4 3.005554 CTCTGTTCGCTCATTGGTCAAT 58.994 45.455 0.00 0.00 0.00 2.57
4 5 2.416747 CTCTGTTCGCTCATTGGTCAA 58.583 47.619 0.00 0.00 0.00 3.18
5 6 1.338105 CCTCTGTTCGCTCATTGGTCA 60.338 52.381 0.00 0.00 0.00 4.02
6 7 1.363744 CCTCTGTTCGCTCATTGGTC 58.636 55.000 0.00 0.00 0.00 4.02
7 8 0.674895 GCCTCTGTTCGCTCATTGGT 60.675 55.000 0.00 0.00 0.00 3.67
8 9 1.372087 GGCCTCTGTTCGCTCATTGG 61.372 60.000 0.00 0.00 0.00 3.16
9 10 0.674581 TGGCCTCTGTTCGCTCATTG 60.675 55.000 3.32 0.00 0.00 2.82
10 11 0.036732 TTGGCCTCTGTTCGCTCATT 59.963 50.000 3.32 0.00 0.00 2.57
11 12 0.036732 TTTGGCCTCTGTTCGCTCAT 59.963 50.000 3.32 0.00 0.00 2.90
12 13 0.603707 CTTTGGCCTCTGTTCGCTCA 60.604 55.000 3.32 0.00 0.00 4.26
44 45 2.100631 GTGCATCTTGGTCGGACGG 61.101 63.158 1.43 0.00 0.00 4.79
68 69 0.907704 ACTGGATTCCCCTGTGCGTA 60.908 55.000 0.00 0.00 44.25 4.42
124 126 3.012560 GCATGGGCCTAGTTGCTAG 57.987 57.895 4.53 0.00 34.16 3.42
138 140 2.872557 CAGTTGGTCAGCGGCATG 59.127 61.111 1.45 0.00 0.00 4.06
139 141 3.058160 GCAGTTGGTCAGCGGCAT 61.058 61.111 1.45 0.00 33.51 4.40
146 148 0.178995 TGCTTGATGGCAGTTGGTCA 60.179 50.000 0.00 0.00 37.29 4.02
148 150 1.181098 GGTGCTTGATGGCAGTTGGT 61.181 55.000 0.00 0.00 43.25 3.67
179 181 1.526917 GATGGGGAGTTGGGCGATG 60.527 63.158 0.00 0.00 0.00 3.84
180 182 1.355718 ATGATGGGGAGTTGGGCGAT 61.356 55.000 0.00 0.00 0.00 4.58
181 183 0.692756 TATGATGGGGAGTTGGGCGA 60.693 55.000 0.00 0.00 0.00 5.54
182 184 0.401738 ATATGATGGGGAGTTGGGCG 59.598 55.000 0.00 0.00 0.00 6.13
184 186 3.625716 GCCATATATGATGGGGAGTTGGG 60.626 52.174 14.54 0.00 39.53 4.12
212 220 2.439507 GCTCCCCTTGGTTCATGATCTA 59.560 50.000 0.00 0.00 0.00 1.98
218 226 0.846427 TGAGGCTCCCCTTGGTTCAT 60.846 55.000 12.86 0.00 43.12 2.57
226 234 2.976490 GCACACATGAGGCTCCCCT 61.976 63.158 12.86 0.00 46.74 4.79
230 239 0.801251 GACTTGCACACATGAGGCTC 59.199 55.000 7.79 7.79 0.00 4.70
239 249 1.298339 GTGGCGTTGACTTGCACAC 60.298 57.895 0.00 0.00 0.00 3.82
303 314 2.358247 GTTGTGACCGGATGGCGT 60.358 61.111 9.46 0.00 39.70 5.68
316 327 4.889409 ACAGGAGTGTTGATTTGATGTTGT 59.111 37.500 0.00 0.00 30.30 3.32
319 330 3.822735 CCACAGGAGTGTTGATTTGATGT 59.177 43.478 0.00 0.00 44.39 3.06
336 348 2.583441 TTCGGGCTCTCCACCACAG 61.583 63.158 0.00 0.00 34.36 3.66
356 368 3.500448 TTAGGTGACATTGAACTGGCA 57.500 42.857 0.00 0.00 0.00 4.92
360 372 3.689649 GCGGATTTAGGTGACATTGAACT 59.310 43.478 0.00 0.00 0.00 3.01
438 450 1.546923 TGGTGTGGTGTCGATCGTTAT 59.453 47.619 15.94 0.00 0.00 1.89
441 453 0.389817 CATGGTGTGGTGTCGATCGT 60.390 55.000 15.94 0.00 0.00 3.73
452 464 3.129502 CGCCTCTGCCATGGTGTG 61.130 66.667 14.67 7.68 0.00 3.82
453 465 4.415150 CCGCCTCTGCCATGGTGT 62.415 66.667 14.67 0.00 32.37 4.16
540 560 1.035932 CGAGATGTCGGTAGTGGGGT 61.036 60.000 3.96 0.00 42.87 4.95
581 601 2.284331 TAGCTTGGGGTGCGGAGA 60.284 61.111 0.00 0.00 35.28 3.71
593 613 3.470888 AGGATGCGGCGGTAGCTT 61.471 61.111 9.78 0.00 44.37 3.74
623 643 1.678123 CCTTCTCGTCTCCCACTCGTA 60.678 57.143 0.00 0.00 0.00 3.43
719 772 1.221909 AAAATGTCCCCTCCCTCCCC 61.222 60.000 0.00 0.00 0.00 4.81
720 773 0.710588 AAAAATGTCCCCTCCCTCCC 59.289 55.000 0.00 0.00 0.00 4.30
737 790 6.337356 GGATGAGTCCTGAAACAAACAAAAA 58.663 36.000 0.00 0.00 41.60 1.94
738 791 5.163457 GGGATGAGTCCTGAAACAAACAAAA 60.163 40.000 0.00 0.00 44.44 2.44
739 792 4.340950 GGGATGAGTCCTGAAACAAACAAA 59.659 41.667 0.00 0.00 44.44 2.83
740 793 3.888930 GGGATGAGTCCTGAAACAAACAA 59.111 43.478 0.00 0.00 44.44 2.83
741 794 3.117701 TGGGATGAGTCCTGAAACAAACA 60.118 43.478 0.00 0.00 44.44 2.83
742 795 3.486383 TGGGATGAGTCCTGAAACAAAC 58.514 45.455 0.00 0.00 44.44 2.93
746 799 5.104259 ACTTATGGGATGAGTCCTGAAAC 57.896 43.478 0.00 0.00 44.44 2.78
785 838 1.091537 TCCGCCGTTGGATTGAAATC 58.908 50.000 0.00 0.00 31.53 2.17
981 1045 0.033781 TGGTTTGTCCGTCCGGTTAG 59.966 55.000 0.00 0.00 39.52 2.34
990 1058 2.046285 GGCCTCCATGGTTTGTCCG 61.046 63.158 12.58 0.00 39.52 4.79
991 1059 1.682344 GGGCCTCCATGGTTTGTCC 60.682 63.158 12.58 8.67 38.35 4.02
992 1060 0.541764 TTGGGCCTCCATGGTTTGTC 60.542 55.000 12.58 2.74 43.63 3.18
993 1061 0.831711 GTTGGGCCTCCATGGTTTGT 60.832 55.000 12.58 0.00 43.63 2.83
1008 1076 4.335647 AGCCGGGACAGCAGTTGG 62.336 66.667 2.18 0.00 0.00 3.77
1034 1105 1.007600 TGATGAAGCTGAGGAGGAGGA 59.992 52.381 0.00 0.00 0.00 3.71
1035 1106 1.493861 TGATGAAGCTGAGGAGGAGG 58.506 55.000 0.00 0.00 0.00 4.30
1036 1107 2.288334 CGATGATGAAGCTGAGGAGGAG 60.288 54.545 0.00 0.00 0.00 3.69
1037 1108 1.685517 CGATGATGAAGCTGAGGAGGA 59.314 52.381 0.00 0.00 0.00 3.71
1038 1109 1.411977 ACGATGATGAAGCTGAGGAGG 59.588 52.381 0.00 0.00 0.00 4.30
1039 1110 2.361757 AGACGATGATGAAGCTGAGGAG 59.638 50.000 0.00 0.00 0.00 3.69
1175 1246 3.153919 TGGAGGTAAATTGGTGCAGTTC 58.846 45.455 0.00 0.00 0.00 3.01
1194 1265 1.796190 CTATGCATGCAGCTGGCTGG 61.796 60.000 26.69 6.09 45.94 4.85
1203 1274 3.381045 GAGTACGTTAGCTATGCATGCA 58.619 45.455 25.04 25.04 0.00 3.96
1204 1275 2.731976 GGAGTACGTTAGCTATGCATGC 59.268 50.000 11.82 11.82 0.00 4.06
1205 1276 3.243737 TGGGAGTACGTTAGCTATGCATG 60.244 47.826 10.16 0.26 0.00 4.06
1206 1277 2.963101 TGGGAGTACGTTAGCTATGCAT 59.037 45.455 3.79 3.79 0.00 3.96
1495 1568 4.395583 ACGGGCGAGTCGACGAAC 62.396 66.667 28.42 9.66 34.63 3.95
1767 1958 3.569701 CCCCCGACATAGAAATGATTTGG 59.430 47.826 0.00 0.00 36.54 3.28
1884 2078 5.067674 TGGACTTTCTTTCAAGTGAATGTGG 59.932 40.000 6.77 2.78 37.11 4.17
1906 2100 3.317993 CCTGTCCAAAGTAAACACCTTGG 59.682 47.826 0.00 0.00 0.00 3.61
2233 3863 6.037940 CACCTCATACAACTGATCAGAAATGG 59.962 42.308 29.27 18.60 0.00 3.16
2240 3870 7.423844 ACTAATCACCTCATACAACTGATCA 57.576 36.000 0.00 0.00 0.00 2.92
2281 3911 2.807967 GCGCATAGGTGATTGAGCAATA 59.192 45.455 0.30 0.00 38.36 1.90
2282 3912 1.605710 GCGCATAGGTGATTGAGCAAT 59.394 47.619 0.30 0.00 38.36 3.56
2411 4047 3.077359 GCAGTGCTCCACTATTGTCTTT 58.923 45.455 8.18 0.00 43.43 2.52
2421 4057 2.753043 CCCATGGCAGTGCTCCAC 60.753 66.667 16.11 0.00 36.26 4.02
2477 4113 1.340017 GCCTTGAACCTGTCCATAGCA 60.340 52.381 0.00 0.00 0.00 3.49
2509 4145 6.617953 GCCGTTAATTGTAAGTTGAGTGACTC 60.618 42.308 5.47 5.47 0.00 3.36
2521 4157 3.263261 TGATCAGCGCCGTTAATTGTAA 58.737 40.909 2.29 0.00 0.00 2.41
2623 4279 7.536855 AGGTTCGTGTTCTTAGTATGTAGAAG 58.463 38.462 0.00 0.00 31.45 2.85
2642 4298 2.623889 AGGAGATACGATGGAAGGTTCG 59.376 50.000 0.00 0.00 41.04 3.95
2761 4417 9.587772 CATATTAGGATGGAAGTCGTATTTAGG 57.412 37.037 0.00 0.00 0.00 2.69
2765 4421 8.088981 GTGACATATTAGGATGGAAGTCGTATT 58.911 37.037 0.00 0.00 0.00 1.89
2820 4476 8.082852 ACATATGAGGATGAAAGTCGTATGTAC 58.917 37.037 10.38 0.00 0.00 2.90
2929 4585 3.311106 TGGAAGTCGTACGTAAGCAAAG 58.689 45.455 16.05 0.00 45.62 2.77
2939 4595 7.450124 TGATAGATTAGGATGGAAGTCGTAC 57.550 40.000 0.00 0.00 0.00 3.67
2998 4654 9.461312 AGCCAACAACTAAATATTGTGATAGAA 57.539 29.630 0.00 0.00 40.16 2.10
2999 4655 8.892723 CAGCCAACAACTAAATATTGTGATAGA 58.107 33.333 0.00 0.00 40.16 1.98
3000 4656 7.645340 GCAGCCAACAACTAAATATTGTGATAG 59.355 37.037 0.00 0.00 40.16 2.08
3001 4657 7.416213 GGCAGCCAACAACTAAATATTGTGATA 60.416 37.037 6.55 0.00 40.16 2.15
3002 4658 6.332630 GCAGCCAACAACTAAATATTGTGAT 58.667 36.000 0.00 0.00 40.16 3.06
3003 4659 5.336372 GGCAGCCAACAACTAAATATTGTGA 60.336 40.000 6.55 0.00 40.16 3.58
3004 4660 4.864247 GGCAGCCAACAACTAAATATTGTG 59.136 41.667 6.55 0.00 40.16 3.33
3005 4661 4.526262 TGGCAGCCAACAACTAAATATTGT 59.474 37.500 13.33 0.00 42.07 2.71
3006 4662 5.070770 TGGCAGCCAACAACTAAATATTG 57.929 39.130 13.33 0.00 0.00 1.90
3007 4663 5.736951 TTGGCAGCCAACAACTAAATATT 57.263 34.783 23.88 0.00 38.75 1.28
3008 4664 5.736951 TTTGGCAGCCAACAACTAAATAT 57.263 34.783 27.40 0.00 43.82 1.28
3009 4665 5.736951 ATTTGGCAGCCAACAACTAAATA 57.263 34.783 27.40 9.18 43.82 1.40
3010 4666 4.622260 ATTTGGCAGCCAACAACTAAAT 57.378 36.364 27.40 12.74 43.82 1.40
3011 4667 4.376146 GAATTTGGCAGCCAACAACTAAA 58.624 39.130 27.40 10.77 43.82 1.85
3012 4668 3.551863 CGAATTTGGCAGCCAACAACTAA 60.552 43.478 27.40 11.56 43.82 2.24
3013 4669 2.030363 CGAATTTGGCAGCCAACAACTA 60.030 45.455 27.40 12.37 43.82 2.24
3014 4670 1.269726 CGAATTTGGCAGCCAACAACT 60.270 47.619 27.40 11.08 43.82 3.16
3125 8187 4.666512 ACTGCAGGGAAACATCAAATAGT 58.333 39.130 19.93 0.00 0.00 2.12
3166 8232 7.035612 GCACTTCTTATACAAAATTTGGGAGG 58.964 38.462 10.71 3.85 34.12 4.30
3185 8251 4.333926 GTGGGAGACAGATAATTGCACTTC 59.666 45.833 0.00 0.00 0.00 3.01
3215 8281 2.234661 CCTGCCTTGTGTAGTCTCATCA 59.765 50.000 0.00 0.00 0.00 3.07
3279 8345 0.112995 TGGCAATCCACTTGAGGCTT 59.887 50.000 0.00 0.00 37.47 4.35
3280 8346 0.333993 ATGGCAATCCACTTGAGGCT 59.666 50.000 0.00 0.00 46.92 4.58
3323 8389 5.348179 TCGCGATTTCACTTATTCGGTAAAA 59.652 36.000 3.71 0.00 32.45 1.52
3329 8395 4.692371 TCATCGCGATTTCACTTATTCG 57.308 40.909 21.14 3.43 34.83 3.34
3394 8460 9.710900 ATATTTTTCTCTTGTTCCCAATGTTTC 57.289 29.630 0.00 0.00 0.00 2.78
3544 8612 7.828508 ACGTGGTAATATATACTCTTGTGGA 57.171 36.000 0.00 0.00 0.00 4.02
3587 8655 5.760193 TTTGATTGCGTGCAAATATTGAC 57.240 34.783 11.75 0.00 39.55 3.18
3589 8657 6.763101 TGAATTTGATTGCGTGCAAATATTG 58.237 32.000 11.75 0.00 42.17 1.90
3595 8663 5.058149 AGTATGAATTTGATTGCGTGCAA 57.942 34.783 10.02 10.02 40.47 4.08
3634 8707 3.502455 ATGTCAGCCGCATGCACG 61.502 61.111 19.57 8.02 44.83 5.34
3706 8779 7.137490 TCATTGTGAAGCTTAGAATCAACAG 57.863 36.000 0.00 0.00 0.00 3.16
3707 8780 7.229306 AGTTCATTGTGAAGCTTAGAATCAACA 59.771 33.333 0.00 0.00 37.00 3.33
3771 8844 4.089361 GGACTTTTCTTCCATTGGGTGAT 58.911 43.478 2.09 0.00 32.82 3.06
3783 8858 4.058817 GTCATCACAGTCGGACTTTTCTT 58.941 43.478 8.18 0.00 0.00 2.52
3799 8874 3.522759 TGTTAGGTGGTTAGGGTCATCA 58.477 45.455 0.00 0.00 0.00 3.07
3829 8906 4.575236 GCTCATCGTCGATATGGACCTATA 59.425 45.833 7.56 0.00 33.30 1.31
3843 8920 4.935885 AATTCAGTTCTTGCTCATCGTC 57.064 40.909 0.00 0.00 0.00 4.20
3844 8921 5.482908 ACTAATTCAGTTCTTGCTCATCGT 58.517 37.500 0.00 0.00 31.59 3.73
3845 8922 5.006165 GGACTAATTCAGTTCTTGCTCATCG 59.994 44.000 0.00 0.00 37.72 3.84
3888 8965 6.910433 CGACACATAAATTTATACCTTGTGGC 59.090 38.462 23.11 20.99 36.63 5.01
3906 8983 2.079158 CTGCTCAAACATCCGACACAT 58.921 47.619 0.00 0.00 0.00 3.21
3937 9014 3.367292 CGTGGCTGGTTGAAATTAAGCAT 60.367 43.478 0.00 0.00 37.42 3.79
3958 9035 0.742990 TCTACTGCAATTTCGGGGCG 60.743 55.000 0.00 0.00 0.00 6.13
3959 9036 1.401905 CTTCTACTGCAATTTCGGGGC 59.598 52.381 0.00 0.00 0.00 5.80
4030 9108 9.230122 CCTGGCATATGTATGAAATATTGTGTA 57.770 33.333 4.29 0.00 35.75 2.90
4031 9109 7.309377 GCCTGGCATATGTATGAAATATTGTGT 60.309 37.037 15.17 0.00 35.75 3.72
4032 9110 7.031372 GCCTGGCATATGTATGAAATATTGTG 58.969 38.462 15.17 0.00 35.75 3.33
4096 9174 9.436957 ACAACATCTTAGTAAGTGGAATAACTG 57.563 33.333 9.71 0.61 0.00 3.16
4190 9277 3.287222 GTTAGCCCAAACATATGCCAGA 58.713 45.455 1.58 0.00 0.00 3.86
4307 9395 9.708222 GCATAGTGATACAAAATTAGAGTGTTG 57.292 33.333 0.00 0.00 0.00 3.33
4317 9405 4.397730 TGTTGGCGCATAGTGATACAAAAT 59.602 37.500 10.83 0.00 0.00 1.82
4558 9646 3.482436 ACCATCTTTTGTTCCGCTGTTA 58.518 40.909 0.00 0.00 0.00 2.41
4862 9972 5.109903 CAGTTGGAAAACTATACTCCCTCG 58.890 45.833 0.00 0.00 0.00 4.63
4890 10000 4.461081 TCTCCACTGTAGAAGAAAGAGAGC 59.539 45.833 0.00 0.00 30.61 4.09
4980 10090 0.396139 GCCAAGCCCTCCATTCATCA 60.396 55.000 0.00 0.00 0.00 3.07
5212 10322 4.668138 AGAGAGTCTCCTAAGTGAAGGT 57.332 45.455 16.74 0.00 37.91 3.50
5293 10406 3.882888 TGGTCAATGAGAACTGTCCAAAC 59.117 43.478 0.00 0.00 34.06 2.93
5355 10468 2.769209 AGGCATCTCTCAGGTTGGTAT 58.231 47.619 0.00 0.00 0.00 2.73
5376 10489 0.607762 TCCAACGCCTAAGCATTGCA 60.608 50.000 11.91 0.00 40.80 4.08
5403 10516 2.620115 ACAAACACATCAGAGTGGCTTG 59.380 45.455 0.00 0.00 43.72 4.01
5404 10517 2.620115 CACAAACACATCAGAGTGGCTT 59.380 45.455 0.00 0.00 43.72 4.35
5431 10544 6.714278 TCACCCTATCCAACATCATGATATG 58.286 40.000 8.15 10.43 0.00 1.78
5463 10576 7.708322 ACACATAGAACATACTCACACATCATC 59.292 37.037 0.00 0.00 0.00 2.92
5627 10744 1.410153 ACCTTGTCGTTACCTTGTCGT 59.590 47.619 0.00 0.00 0.00 4.34
5638 10755 2.098770 GTCGATAGCCTAACCTTGTCGT 59.901 50.000 0.00 0.00 0.00 4.34
5654 10771 7.602644 TCAGTCAAGCTTAATTAGTTTGTCGAT 59.397 33.333 0.00 0.00 43.33 3.59
5657 10774 8.089115 ACTCAGTCAAGCTTAATTAGTTTGTC 57.911 34.615 0.00 0.00 43.33 3.18
5724 10842 4.517285 AGCTTTGTGTCTTCAACTCTTCA 58.483 39.130 0.00 0.00 0.00 3.02
5725 10843 4.318404 CGAGCTTTGTGTCTTCAACTCTTC 60.318 45.833 0.00 0.00 0.00 2.87
5726 10844 3.557595 CGAGCTTTGTGTCTTCAACTCTT 59.442 43.478 0.00 0.00 0.00 2.85
5727 10845 3.126831 CGAGCTTTGTGTCTTCAACTCT 58.873 45.455 0.00 0.00 0.00 3.24
5728 10846 2.221981 CCGAGCTTTGTGTCTTCAACTC 59.778 50.000 0.00 0.00 0.00 3.01
5729 10847 2.213499 CCGAGCTTTGTGTCTTCAACT 58.787 47.619 0.00 0.00 0.00 3.16
5730 10848 1.940613 ACCGAGCTTTGTGTCTTCAAC 59.059 47.619 0.00 0.00 0.00 3.18
5731 10849 2.325583 ACCGAGCTTTGTGTCTTCAA 57.674 45.000 0.00 0.00 0.00 2.69
5732 10850 2.325583 AACCGAGCTTTGTGTCTTCA 57.674 45.000 0.00 0.00 0.00 3.02
5840 10959 3.261643 TGCTTGAGCCTACTTCAGATTCA 59.738 43.478 0.00 0.00 41.18 2.57
5865 10987 7.654022 AAATCTTTGGTTACTTTTGTGGAGA 57.346 32.000 0.00 0.00 0.00 3.71
5898 11022 5.880054 TTGCTATTTCTCTTTCCGGAAAG 57.120 39.130 39.76 39.76 46.82 2.62
5934 11058 9.847706 CTGTGCAATAGTTTATCGAGATATAGT 57.152 33.333 0.00 0.00 0.00 2.12
5989 11113 2.543861 CGAGCGAGCTTGATAAGGCTAA 60.544 50.000 4.70 0.00 39.05 3.09
6014 11138 5.509163 CCGTGGACTACTAGTATCCCAAATG 60.509 48.000 19.18 13.81 0.00 2.32
6019 11143 3.145286 GTCCGTGGACTACTAGTATCCC 58.855 54.545 19.96 16.20 41.57 3.85
6020 11144 3.813443 TGTCCGTGGACTACTAGTATCC 58.187 50.000 19.17 17.69 44.80 2.59
6021 11145 6.039047 TCAAATGTCCGTGGACTACTAGTATC 59.961 42.308 19.17 3.76 44.80 2.24
6022 11146 5.889853 TCAAATGTCCGTGGACTACTAGTAT 59.110 40.000 19.17 0.72 44.80 2.12
6023 11147 5.255687 TCAAATGTCCGTGGACTACTAGTA 58.744 41.667 19.17 1.89 44.80 1.82
6024 11148 4.084287 TCAAATGTCCGTGGACTACTAGT 58.916 43.478 19.17 0.00 44.80 2.57
6025 11149 4.713824 TCAAATGTCCGTGGACTACTAG 57.286 45.455 19.17 6.66 44.80 2.57
6028 11152 6.920569 ATATTTCAAATGTCCGTGGACTAC 57.079 37.500 19.17 0.00 44.80 2.73
6029 11153 7.931578 AAATATTTCAAATGTCCGTGGACTA 57.068 32.000 19.17 7.05 44.80 2.59
6033 11157 5.063312 GGCAAAATATTTCAAATGTCCGTGG 59.937 40.000 0.10 0.00 0.00 4.94
6034 11158 5.636965 TGGCAAAATATTTCAAATGTCCGTG 59.363 36.000 0.10 0.00 0.00 4.94
6035 11159 5.788450 TGGCAAAATATTTCAAATGTCCGT 58.212 33.333 0.10 0.00 0.00 4.69
6036 11160 6.907206 ATGGCAAAATATTTCAAATGTCCG 57.093 33.333 0.10 0.00 0.00 4.79
6038 11162 9.654417 GCATTATGGCAAAATATTTCAAATGTC 57.346 29.630 0.10 0.00 0.00 3.06
6039 11163 9.175312 TGCATTATGGCAAAATATTTCAAATGT 57.825 25.926 0.10 0.00 41.65 2.71
6055 11179 7.536895 TGTAAAATTCAACATGCATTATGGC 57.463 32.000 0.00 0.00 41.25 4.40
6103 11227 9.430399 AGAAGTGATGGATTTGGATGATATTTT 57.570 29.630 0.00 0.00 0.00 1.82
6104 11228 9.430399 AAGAAGTGATGGATTTGGATGATATTT 57.570 29.630 0.00 0.00 0.00 1.40
6107 11231 9.730705 GATAAGAAGTGATGGATTTGGATGATA 57.269 33.333 0.00 0.00 0.00 2.15
6108 11232 8.446394 AGATAAGAAGTGATGGATTTGGATGAT 58.554 33.333 0.00 0.00 0.00 2.45
6109 11233 7.809238 AGATAAGAAGTGATGGATTTGGATGA 58.191 34.615 0.00 0.00 0.00 2.92
6110 11234 7.937942 AGAGATAAGAAGTGATGGATTTGGATG 59.062 37.037 0.00 0.00 0.00 3.51
6111 11235 8.043429 AGAGATAAGAAGTGATGGATTTGGAT 57.957 34.615 0.00 0.00 0.00 3.41
6112 11236 7.443302 AGAGATAAGAAGTGATGGATTTGGA 57.557 36.000 0.00 0.00 0.00 3.53
6113 11237 9.434420 GATAGAGATAAGAAGTGATGGATTTGG 57.566 37.037 0.00 0.00 0.00 3.28
6114 11238 9.138062 CGATAGAGATAAGAAGTGATGGATTTG 57.862 37.037 0.00 0.00 39.76 2.32
6115 11239 9.083422 TCGATAGAGATAAGAAGTGATGGATTT 57.917 33.333 0.00 0.00 42.67 2.17
6116 11240 8.642935 TCGATAGAGATAAGAAGTGATGGATT 57.357 34.615 0.00 0.00 42.67 3.01
6197 11321 9.562583 GTTGTGTTAGTCTCACATTTGTTTTTA 57.437 29.630 0.00 0.00 43.74 1.52
6198 11322 8.085296 TGTTGTGTTAGTCTCACATTTGTTTTT 58.915 29.630 0.00 0.00 43.74 1.94
6199 11323 7.598278 TGTTGTGTTAGTCTCACATTTGTTTT 58.402 30.769 0.00 0.00 43.74 2.43
6200 11324 7.151999 TGTTGTGTTAGTCTCACATTTGTTT 57.848 32.000 0.00 0.00 43.74 2.83
6201 11325 6.751514 TGTTGTGTTAGTCTCACATTTGTT 57.248 33.333 0.00 0.00 43.74 2.83
6202 11326 6.767902 AGATGTTGTGTTAGTCTCACATTTGT 59.232 34.615 0.00 0.00 43.74 2.83
6203 11327 7.194607 AGATGTTGTGTTAGTCTCACATTTG 57.805 36.000 0.00 0.00 43.74 2.32
6204 11328 7.807977 AAGATGTTGTGTTAGTCTCACATTT 57.192 32.000 0.00 0.00 43.74 2.32
6205 11329 7.807977 AAAGATGTTGTGTTAGTCTCACATT 57.192 32.000 0.00 0.00 43.74 2.71
6206 11330 8.939929 CATAAAGATGTTGTGTTAGTCTCACAT 58.060 33.333 0.00 0.00 43.74 3.21
6207 11331 7.387673 CCATAAAGATGTTGTGTTAGTCTCACA 59.612 37.037 0.00 0.00 42.84 3.58
6208 11332 7.148407 CCCATAAAGATGTTGTGTTAGTCTCAC 60.148 40.741 0.00 0.00 36.48 3.51
6209 11333 6.878923 CCCATAAAGATGTTGTGTTAGTCTCA 59.121 38.462 0.00 0.00 0.00 3.27
6210 11334 7.103641 TCCCATAAAGATGTTGTGTTAGTCTC 58.896 38.462 0.00 0.00 0.00 3.36
6211 11335 7.016153 TCCCATAAAGATGTTGTGTTAGTCT 57.984 36.000 0.00 0.00 0.00 3.24
6212 11336 7.681939 TTCCCATAAAGATGTTGTGTTAGTC 57.318 36.000 0.00 0.00 0.00 2.59
6213 11337 8.650143 AATTCCCATAAAGATGTTGTGTTAGT 57.350 30.769 0.00 0.00 0.00 2.24
6214 11338 9.927668 AAAATTCCCATAAAGATGTTGTGTTAG 57.072 29.630 0.00 0.00 0.00 2.34
6241 11365 4.343526 TGGCAAAATCTAGAGTGGCAAAAA 59.656 37.500 20.86 4.99 42.78 1.94
6242 11366 3.894427 TGGCAAAATCTAGAGTGGCAAAA 59.106 39.130 20.86 5.26 42.78 2.44
6243 11367 3.495331 TGGCAAAATCTAGAGTGGCAAA 58.505 40.909 20.86 7.34 42.78 3.68
6244 11368 3.153369 TGGCAAAATCTAGAGTGGCAA 57.847 42.857 20.86 8.40 42.78 4.52
6245 11369 2.877097 TGGCAAAATCTAGAGTGGCA 57.123 45.000 19.84 19.84 43.41 4.92
6246 11370 4.725790 AATTGGCAAAATCTAGAGTGGC 57.274 40.909 3.01 16.21 37.09 5.01
6247 11371 5.394553 GGGAAATTGGCAAAATCTAGAGTGG 60.395 44.000 3.01 0.00 0.00 4.00
6248 11372 5.420104 AGGGAAATTGGCAAAATCTAGAGTG 59.580 40.000 3.01 0.00 0.00 3.51
6249 11373 5.583932 AGGGAAATTGGCAAAATCTAGAGT 58.416 37.500 3.01 0.00 0.00 3.24
6250 11374 6.535963 AAGGGAAATTGGCAAAATCTAGAG 57.464 37.500 3.01 0.00 0.00 2.43
6251 11375 7.417797 GCATAAGGGAAATTGGCAAAATCTAGA 60.418 37.037 3.01 0.00 0.00 2.43
6252 11376 6.703165 GCATAAGGGAAATTGGCAAAATCTAG 59.297 38.462 3.01 0.00 0.00 2.43
6253 11377 6.407979 GGCATAAGGGAAATTGGCAAAATCTA 60.408 38.462 3.01 0.00 35.00 1.98
6254 11378 5.430886 GCATAAGGGAAATTGGCAAAATCT 58.569 37.500 3.01 0.00 0.00 2.40
6255 11379 4.576053 GGCATAAGGGAAATTGGCAAAATC 59.424 41.667 3.01 5.52 35.00 2.17
6256 11380 4.018597 TGGCATAAGGGAAATTGGCAAAAT 60.019 37.500 3.01 0.00 41.05 1.82
6257 11381 3.328931 TGGCATAAGGGAAATTGGCAAAA 59.671 39.130 3.01 0.00 41.05 2.44
6258 11382 2.909006 TGGCATAAGGGAAATTGGCAAA 59.091 40.909 3.01 0.00 41.05 3.68
6259 11383 2.235898 GTGGCATAAGGGAAATTGGCAA 59.764 45.455 0.68 0.68 44.76 4.52
6260 11384 1.830477 GTGGCATAAGGGAAATTGGCA 59.170 47.619 0.00 0.00 41.64 4.92
6261 11385 2.101415 GAGTGGCATAAGGGAAATTGGC 59.899 50.000 0.00 0.00 35.41 4.52
6262 11386 3.635591 AGAGTGGCATAAGGGAAATTGG 58.364 45.455 0.00 0.00 0.00 3.16
6263 11387 5.684704 TCTAGAGTGGCATAAGGGAAATTG 58.315 41.667 0.00 0.00 0.00 2.32
6264 11388 5.975988 TCTAGAGTGGCATAAGGGAAATT 57.024 39.130 0.00 0.00 0.00 1.82
6265 11389 6.521527 AATCTAGAGTGGCATAAGGGAAAT 57.478 37.500 0.00 0.00 0.00 2.17
6266 11390 5.975988 AATCTAGAGTGGCATAAGGGAAA 57.024 39.130 0.00 0.00 0.00 3.13
6267 11391 5.975988 AAATCTAGAGTGGCATAAGGGAA 57.024 39.130 0.00 0.00 0.00 3.97
6268 11392 5.428457 TCAAAATCTAGAGTGGCATAAGGGA 59.572 40.000 0.00 0.00 0.00 4.20
6269 11393 5.529060 GTCAAAATCTAGAGTGGCATAAGGG 59.471 44.000 0.00 0.00 0.00 3.95
6270 11394 6.115446 TGTCAAAATCTAGAGTGGCATAAGG 58.885 40.000 0.00 0.00 0.00 2.69
6271 11395 7.798596 ATGTCAAAATCTAGAGTGGCATAAG 57.201 36.000 15.58 0.00 34.66 1.73
6272 11396 8.579850 AAATGTCAAAATCTAGAGTGGCATAA 57.420 30.769 16.82 0.00 35.34 1.90
6273 11397 7.828717 TGAAATGTCAAAATCTAGAGTGGCATA 59.171 33.333 16.82 4.28 35.34 3.14
6274 11398 6.660521 TGAAATGTCAAAATCTAGAGTGGCAT 59.339 34.615 12.72 12.72 37.91 4.40
6275 11399 6.003326 TGAAATGTCAAAATCTAGAGTGGCA 58.997 36.000 9.74 9.74 0.00 4.92
6276 11400 6.150140 AGTGAAATGTCAAAATCTAGAGTGGC 59.850 38.462 0.00 0.00 34.87 5.01
6277 11401 7.678947 AGTGAAATGTCAAAATCTAGAGTGG 57.321 36.000 0.00 0.00 34.87 4.00
6278 11402 9.956720 AAAAGTGAAATGTCAAAATCTAGAGTG 57.043 29.630 0.00 0.00 34.87 3.51
6279 11403 9.956720 CAAAAGTGAAATGTCAAAATCTAGAGT 57.043 29.630 0.00 0.00 34.87 3.24
6280 11404 8.909671 GCAAAAGTGAAATGTCAAAATCTAGAG 58.090 33.333 0.00 0.00 34.87 2.43
6281 11405 8.632679 AGCAAAAGTGAAATGTCAAAATCTAGA 58.367 29.630 0.00 0.00 34.87 2.43
6282 11406 8.807667 AGCAAAAGTGAAATGTCAAAATCTAG 57.192 30.769 0.00 0.00 34.87 2.43
6283 11407 9.677567 GTAGCAAAAGTGAAATGTCAAAATCTA 57.322 29.630 0.00 0.00 34.87 1.98
6284 11408 8.416329 AGTAGCAAAAGTGAAATGTCAAAATCT 58.584 29.630 0.00 0.00 34.87 2.40
6285 11409 8.579682 AGTAGCAAAAGTGAAATGTCAAAATC 57.420 30.769 0.00 0.00 34.87 2.17
6286 11410 8.416329 AGAGTAGCAAAAGTGAAATGTCAAAAT 58.584 29.630 0.00 0.00 34.87 1.82
6287 11411 7.771183 AGAGTAGCAAAAGTGAAATGTCAAAA 58.229 30.769 0.00 0.00 34.87 2.44
6288 11412 7.333528 AGAGTAGCAAAAGTGAAATGTCAAA 57.666 32.000 0.00 0.00 34.87 2.69
6289 11413 6.942532 AGAGTAGCAAAAGTGAAATGTCAA 57.057 33.333 0.00 0.00 34.87 3.18
6290 11414 6.942532 AAGAGTAGCAAAAGTGAAATGTCA 57.057 33.333 0.00 0.00 0.00 3.58
6291 11415 8.089115 ACTAAGAGTAGCAAAAGTGAAATGTC 57.911 34.615 0.00 0.00 0.00 3.06
6292 11416 8.451908 AACTAAGAGTAGCAAAAGTGAAATGT 57.548 30.769 0.00 0.00 0.00 2.71
6293 11417 9.736023 AAAACTAAGAGTAGCAAAAGTGAAATG 57.264 29.630 0.00 0.00 0.00 2.32
6295 11419 9.567848 CAAAAACTAAGAGTAGCAAAAGTGAAA 57.432 29.630 0.00 0.00 0.00 2.69
6296 11420 8.952278 TCAAAAACTAAGAGTAGCAAAAGTGAA 58.048 29.630 0.00 0.00 0.00 3.18
6297 11421 8.395633 GTCAAAAACTAAGAGTAGCAAAAGTGA 58.604 33.333 0.00 0.00 0.00 3.41
6298 11422 8.181573 TGTCAAAAACTAAGAGTAGCAAAAGTG 58.818 33.333 0.00 0.00 0.00 3.16
6299 11423 8.276252 TGTCAAAAACTAAGAGTAGCAAAAGT 57.724 30.769 0.00 0.00 0.00 2.66
6300 11424 9.736023 ATTGTCAAAAACTAAGAGTAGCAAAAG 57.264 29.630 0.00 0.00 0.00 2.27
6312 11436 9.123709 GCGATTGTGATAATTGTCAAAAACTAA 57.876 29.630 11.35 0.50 29.63 2.24
6313 11437 7.753132 GGCGATTGTGATAATTGTCAAAAACTA 59.247 33.333 11.35 0.00 29.63 2.24
6314 11438 6.586082 GGCGATTGTGATAATTGTCAAAAACT 59.414 34.615 11.35 0.00 29.63 2.66
6315 11439 6.364706 TGGCGATTGTGATAATTGTCAAAAAC 59.635 34.615 11.35 8.27 29.63 2.43
6316 11440 6.450545 TGGCGATTGTGATAATTGTCAAAAA 58.549 32.000 11.35 7.72 29.63 1.94
6317 11441 6.018589 TGGCGATTGTGATAATTGTCAAAA 57.981 33.333 9.92 9.92 30.34 2.44
6318 11442 5.635417 TGGCGATTGTGATAATTGTCAAA 57.365 34.783 6.45 0.00 0.00 2.69
6319 11443 5.833406 ATGGCGATTGTGATAATTGTCAA 57.167 34.783 6.45 0.00 30.30 3.18
6320 11444 5.833406 AATGGCGATTGTGATAATTGTCA 57.167 34.783 0.03 0.03 30.98 3.58
6321 11445 5.687285 GGAAATGGCGATTGTGATAATTGTC 59.313 40.000 0.00 0.00 0.00 3.18
6322 11446 5.591099 GGAAATGGCGATTGTGATAATTGT 58.409 37.500 0.00 0.00 0.00 2.71
6323 11447 4.676471 CGGAAATGGCGATTGTGATAATTG 59.324 41.667 0.00 0.00 0.00 2.32
6324 11448 4.338118 ACGGAAATGGCGATTGTGATAATT 59.662 37.500 0.00 0.00 0.00 1.40
6325 11449 3.882888 ACGGAAATGGCGATTGTGATAAT 59.117 39.130 0.00 0.00 0.00 1.28
6326 11450 3.064682 CACGGAAATGGCGATTGTGATAA 59.935 43.478 4.92 0.00 0.00 1.75
6327 11451 2.611751 CACGGAAATGGCGATTGTGATA 59.388 45.455 4.92 0.00 0.00 2.15
6328 11452 1.401552 CACGGAAATGGCGATTGTGAT 59.598 47.619 4.92 0.00 0.00 3.06
6329 11453 0.801872 CACGGAAATGGCGATTGTGA 59.198 50.000 4.92 0.00 0.00 3.58
6330 11454 0.179166 CCACGGAAATGGCGATTGTG 60.179 55.000 0.00 0.00 31.52 3.33
6331 11455 2.179764 CCACGGAAATGGCGATTGT 58.820 52.632 0.00 0.00 31.52 2.71
6338 11462 0.033228 TGCTTTTGCCACGGAAATGG 59.967 50.000 0.00 0.00 46.87 3.16
6339 11463 1.863267 TTGCTTTTGCCACGGAAATG 58.137 45.000 0.00 0.00 46.87 2.32
6340 11464 2.611225 TTTGCTTTTGCCACGGAAAT 57.389 40.000 0.00 0.00 46.87 2.17
6341 11465 2.386661 TTTTGCTTTTGCCACGGAAA 57.613 40.000 0.00 0.00 46.87 3.13
6342 11466 2.611225 ATTTTGCTTTTGCCACGGAA 57.389 40.000 0.00 0.00 46.87 4.30
6343 11467 2.611225 AATTTTGCTTTTGCCACGGA 57.389 40.000 0.00 0.00 46.87 4.69
6344 11468 3.064545 TGAAAATTTTGCTTTTGCCACGG 59.935 39.130 8.47 0.00 46.87 4.94
6345 11469 4.033817 TCTGAAAATTTTGCTTTTGCCACG 59.966 37.500 8.47 0.00 46.87 4.94
6346 11470 5.065090 ACTCTGAAAATTTTGCTTTTGCCAC 59.935 36.000 8.47 0.00 46.87 5.01
6347 11471 5.064962 CACTCTGAAAATTTTGCTTTTGCCA 59.935 36.000 8.47 0.00 46.87 4.92
6348 11472 5.294060 TCACTCTGAAAATTTTGCTTTTGCC 59.706 36.000 8.47 0.00 46.87 4.52
6353 11477 9.768662 ACAATTATCACTCTGAAAATTTTGCTT 57.231 25.926 8.47 0.00 0.00 3.91
6354 11478 9.199982 CACAATTATCACTCTGAAAATTTTGCT 57.800 29.630 8.47 0.00 0.00 3.91
6355 11479 9.195411 TCACAATTATCACTCTGAAAATTTTGC 57.805 29.630 8.47 1.07 0.00 3.68
6364 11488 9.889128 TGAAATGTATCACAATTATCACTCTGA 57.111 29.630 0.00 0.00 0.00 3.27
6376 11500 9.066892 ACTCTTAGCTTTTGAAATGTATCACAA 57.933 29.630 0.00 0.00 0.00 3.33
6377 11501 8.506437 CACTCTTAGCTTTTGAAATGTATCACA 58.494 33.333 0.00 0.00 0.00 3.58
6378 11502 7.965107 CCACTCTTAGCTTTTGAAATGTATCAC 59.035 37.037 0.00 0.00 0.00 3.06
6379 11503 7.362056 GCCACTCTTAGCTTTTGAAATGTATCA 60.362 37.037 0.00 0.00 0.00 2.15
6380 11504 6.969473 GCCACTCTTAGCTTTTGAAATGTATC 59.031 38.462 0.00 0.00 0.00 2.24
6381 11505 6.434028 TGCCACTCTTAGCTTTTGAAATGTAT 59.566 34.615 0.00 0.00 0.00 2.29
6382 11506 5.767665 TGCCACTCTTAGCTTTTGAAATGTA 59.232 36.000 0.00 0.00 0.00 2.29
6383 11507 4.584325 TGCCACTCTTAGCTTTTGAAATGT 59.416 37.500 0.00 0.00 0.00 2.71
6384 11508 5.125100 TGCCACTCTTAGCTTTTGAAATG 57.875 39.130 0.00 0.00 0.00 2.32
6385 11509 5.789643 TTGCCACTCTTAGCTTTTGAAAT 57.210 34.783 0.00 0.00 0.00 2.17
6386 11510 5.590530 TTTGCCACTCTTAGCTTTTGAAA 57.409 34.783 0.00 0.00 0.00 2.69
6387 11511 5.590530 TTTTGCCACTCTTAGCTTTTGAA 57.409 34.783 0.00 0.00 0.00 2.69
6388 11512 5.590530 TTTTTGCCACTCTTAGCTTTTGA 57.409 34.783 0.00 0.00 0.00 2.69
6389 11513 5.984926 TCATTTTTGCCACTCTTAGCTTTTG 59.015 36.000 0.00 0.00 0.00 2.44
6390 11514 6.160576 TCATTTTTGCCACTCTTAGCTTTT 57.839 33.333 0.00 0.00 0.00 2.27
6391 11515 5.789643 TCATTTTTGCCACTCTTAGCTTT 57.210 34.783 0.00 0.00 0.00 3.51
6392 11516 5.789643 TTCATTTTTGCCACTCTTAGCTT 57.210 34.783 0.00 0.00 0.00 3.74
6393 11517 5.789643 TTTCATTTTTGCCACTCTTAGCT 57.210 34.783 0.00 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.