Multiple sequence alignment - TraesCS2A01G042900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G042900 chr2A 100.000 2709 0 0 1 2709 17132325 17135033 0.000000e+00 5003.0
1 TraesCS2A01G042900 chr2A 96.332 627 23 0 1 627 748690046 748689420 0.000000e+00 1031.0
2 TraesCS2A01G042900 chr2A 94.904 628 28 4 1 628 204928199 204928822 0.000000e+00 979.0
3 TraesCS2A01G042900 chr2A 78.399 787 104 37 961 1704 17610294 17611057 4.110000e-123 451.0
4 TraesCS2A01G042900 chr2A 87.500 248 27 4 2080 2325 773216428 773216183 1.590000e-72 283.0
5 TraesCS2A01G042900 chr2A 79.808 104 12 7 2326 2424 475930445 475930544 1.740000e-07 67.6
6 TraesCS2A01G042900 chr2B 90.199 1306 72 20 681 1979 27070275 27071531 0.000000e+00 1652.0
7 TraesCS2A01G042900 chr2B 90.075 665 32 11 681 1339 27029725 27030361 0.000000e+00 832.0
8 TraesCS2A01G042900 chr2B 91.057 615 43 8 1372 1979 27017699 27018308 0.000000e+00 821.0
9 TraesCS2A01G042900 chr2B 89.507 629 45 15 1 628 501734664 501734056 0.000000e+00 776.0
10 TraesCS2A01G042900 chr2B 87.050 695 42 23 661 1339 27017036 27017698 0.000000e+00 741.0
11 TraesCS2A01G042900 chr2B 90.706 538 32 10 1372 1896 27030362 27030894 0.000000e+00 701.0
12 TraesCS2A01G042900 chr2B 77.947 789 128 27 951 1710 27636064 27636835 4.110000e-123 451.0
13 TraesCS2A01G042900 chr2B 88.095 294 23 10 1624 1910 27031851 27032139 3.340000e-89 339.0
14 TraesCS2A01G042900 chr2B 82.105 95 11 4 2336 2424 95481861 95481955 2.890000e-10 76.8
15 TraesCS2A01G042900 chr2D 88.986 1253 93 28 661 1898 14976369 14977591 0.000000e+00 1507.0
16 TraesCS2A01G042900 chr2D 94.125 834 39 5 957 1789 15015726 15016550 0.000000e+00 1260.0
17 TraesCS2A01G042900 chr2D 80.094 638 82 21 1099 1710 15583196 15583814 1.490000e-117 433.0
18 TraesCS2A01G042900 chr2D 85.393 267 33 5 2063 2326 528593810 528593547 3.440000e-69 272.0
19 TraesCS2A01G042900 chr2D 94.771 153 8 0 1786 1938 15018677 15018829 3.490000e-59 239.0
20 TraesCS2A01G042900 chr6A 97.611 628 15 0 1 628 59948273 59948900 0.000000e+00 1077.0
21 TraesCS2A01G042900 chr4A 97.143 630 17 1 1 629 242781401 242780772 0.000000e+00 1062.0
22 TraesCS2A01G042900 chr4A 79.808 104 12 7 2326 2424 555557703 555557802 1.740000e-07 67.6
23 TraesCS2A01G042900 chr4A 79.808 104 12 7 2326 2424 609633497 609633398 1.740000e-07 67.6
24 TraesCS2A01G042900 chr4D 96.986 564 17 0 1 564 321821693 321821130 0.000000e+00 948.0
25 TraesCS2A01G042900 chr4D 86.861 274 28 8 2055 2325 422233822 422234090 1.580000e-77 300.0
26 TraesCS2A01G042900 chr7A 93.641 629 37 3 1 628 315523403 315524029 0.000000e+00 937.0
27 TraesCS2A01G042900 chr7A 90.833 240 20 2 2089 2326 115270547 115270786 1.210000e-83 320.0
28 TraesCS2A01G042900 chr7A 81.633 98 16 2 2329 2424 669026287 669026384 2.240000e-11 80.5
29 TraesCS2A01G042900 chr5D 93.185 631 38 4 1 630 527836734 527837360 0.000000e+00 922.0
30 TraesCS2A01G042900 chr5B 92.982 627 38 4 3 628 613040869 613041490 0.000000e+00 909.0
31 TraesCS2A01G042900 chr1D 92.846 629 38 4 1 629 9246107 9245486 0.000000e+00 905.0
32 TraesCS2A01G042900 chr6D 88.973 263 25 4 2064 2325 459267008 459266749 3.360000e-84 322.0
33 TraesCS2A01G042900 chr6D 88.258 264 26 4 2064 2326 412309760 412310019 7.280000e-81 311.0
34 TraesCS2A01G042900 chr6D 83.333 102 14 3 2326 2424 2958573 2958674 1.030000e-14 91.6
35 TraesCS2A01G042900 chr3A 90.535 243 21 2 2090 2330 535716612 535716370 1.210000e-83 320.0
36 TraesCS2A01G042900 chr3A 80.808 99 17 2 2329 2425 10446139 10446237 2.890000e-10 76.8
37 TraesCS2A01G042900 chr3B 87.692 260 23 6 2068 2324 778546494 778546747 7.340000e-76 294.0
38 TraesCS2A01G042900 chr1B 88.797 241 21 5 2089 2325 112413562 112413800 9.490000e-75 291.0
39 TraesCS2A01G042900 chr6B 85.859 99 12 2 2326 2422 6171975 6172073 1.330000e-18 104.0
40 TraesCS2A01G042900 chr6B 83.333 102 12 5 2326 2424 172376019 172376118 3.720000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G042900 chr2A 17132325 17135033 2708 False 5003.0 5003 100.000000 1 2709 1 chr2A.!!$F1 2708
1 TraesCS2A01G042900 chr2A 748689420 748690046 626 True 1031.0 1031 96.332000 1 627 1 chr2A.!!$R1 626
2 TraesCS2A01G042900 chr2A 204928199 204928822 623 False 979.0 979 94.904000 1 628 1 chr2A.!!$F3 627
3 TraesCS2A01G042900 chr2A 17610294 17611057 763 False 451.0 451 78.399000 961 1704 1 chr2A.!!$F2 743
4 TraesCS2A01G042900 chr2B 27070275 27071531 1256 False 1652.0 1652 90.199000 681 1979 1 chr2B.!!$F1 1298
5 TraesCS2A01G042900 chr2B 27017036 27018308 1272 False 781.0 821 89.053500 661 1979 2 chr2B.!!$F4 1318
6 TraesCS2A01G042900 chr2B 501734056 501734664 608 True 776.0 776 89.507000 1 628 1 chr2B.!!$R1 627
7 TraesCS2A01G042900 chr2B 27029725 27032139 2414 False 624.0 832 89.625333 681 1910 3 chr2B.!!$F5 1229
8 TraesCS2A01G042900 chr2B 27636064 27636835 771 False 451.0 451 77.947000 951 1710 1 chr2B.!!$F2 759
9 TraesCS2A01G042900 chr2D 14976369 14977591 1222 False 1507.0 1507 88.986000 661 1898 1 chr2D.!!$F1 1237
10 TraesCS2A01G042900 chr2D 15015726 15018829 3103 False 749.5 1260 94.448000 957 1938 2 chr2D.!!$F3 981
11 TraesCS2A01G042900 chr2D 15583196 15583814 618 False 433.0 433 80.094000 1099 1710 1 chr2D.!!$F2 611
12 TraesCS2A01G042900 chr6A 59948273 59948900 627 False 1077.0 1077 97.611000 1 628 1 chr6A.!!$F1 627
13 TraesCS2A01G042900 chr4A 242780772 242781401 629 True 1062.0 1062 97.143000 1 629 1 chr4A.!!$R1 628
14 TraesCS2A01G042900 chr4D 321821130 321821693 563 True 948.0 948 96.986000 1 564 1 chr4D.!!$R1 563
15 TraesCS2A01G042900 chr7A 315523403 315524029 626 False 937.0 937 93.641000 1 628 1 chr7A.!!$F2 627
16 TraesCS2A01G042900 chr5D 527836734 527837360 626 False 922.0 922 93.185000 1 630 1 chr5D.!!$F1 629
17 TraesCS2A01G042900 chr5B 613040869 613041490 621 False 909.0 909 92.982000 3 628 1 chr5B.!!$F1 625
18 TraesCS2A01G042900 chr1D 9245486 9246107 621 True 905.0 905 92.846000 1 629 1 chr1D.!!$R1 628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
652 657 0.033504 ATCACTTCGCGTCCAACTGT 59.966 50.0 5.77 0.0 0.0 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2144 5188 0.03601 ATTGTCGGGAGCTGACTTGG 60.036 55.0 0.0 0.0 40.15 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
171 172 2.950975 TGCAACTGCTGAAGTCATTTGA 59.049 40.909 2.95 0.00 38.56 2.69
219 221 5.157781 GGGATCAAGAAGAATCGTATCTCG 58.842 45.833 0.00 0.00 41.41 4.04
359 362 8.622948 AAGAAACTTGAGATTCGGTTTATTCT 57.377 30.769 0.00 0.00 30.66 2.40
480 483 5.957132 AGGGAGGGTGTTAGAATATACGTA 58.043 41.667 0.00 0.00 0.00 3.57
515 519 3.068873 CCTCCTTCCCTCTCTTGTATTCG 59.931 52.174 0.00 0.00 0.00 3.34
630 635 8.085296 AGTAGGAACGCTTGATATCTTTCATAG 58.915 37.037 3.98 0.00 0.00 2.23
631 636 7.055667 AGGAACGCTTGATATCTTTCATAGA 57.944 36.000 3.98 0.00 37.28 1.98
632 637 7.675062 AGGAACGCTTGATATCTTTCATAGAT 58.325 34.615 3.98 0.00 45.59 1.98
644 649 6.073327 TCTTTCATAGATATCACTTCGCGT 57.927 37.500 5.77 0.00 0.00 6.01
645 650 6.143496 TCTTTCATAGATATCACTTCGCGTC 58.857 40.000 5.77 0.00 0.00 5.19
646 651 4.421033 TCATAGATATCACTTCGCGTCC 57.579 45.455 5.77 0.00 0.00 4.79
647 652 3.818773 TCATAGATATCACTTCGCGTCCA 59.181 43.478 5.77 0.00 0.00 4.02
648 653 4.277423 TCATAGATATCACTTCGCGTCCAA 59.723 41.667 5.77 0.00 0.00 3.53
649 654 2.810650 AGATATCACTTCGCGTCCAAC 58.189 47.619 5.77 0.00 0.00 3.77
650 655 2.427453 AGATATCACTTCGCGTCCAACT 59.573 45.455 5.77 0.00 0.00 3.16
651 656 1.990799 TATCACTTCGCGTCCAACTG 58.009 50.000 5.77 0.00 0.00 3.16
652 657 0.033504 ATCACTTCGCGTCCAACTGT 59.966 50.000 5.77 0.00 0.00 3.55
653 658 0.669619 TCACTTCGCGTCCAACTGTA 59.330 50.000 5.77 0.00 0.00 2.74
654 659 1.060713 CACTTCGCGTCCAACTGTAG 58.939 55.000 5.77 0.00 0.00 2.74
655 660 0.956633 ACTTCGCGTCCAACTGTAGA 59.043 50.000 5.77 0.00 0.00 2.59
656 661 1.544691 ACTTCGCGTCCAACTGTAGAT 59.455 47.619 5.77 0.00 0.00 1.98
657 662 2.751259 ACTTCGCGTCCAACTGTAGATA 59.249 45.455 5.77 0.00 0.00 1.98
658 663 3.380637 ACTTCGCGTCCAACTGTAGATAT 59.619 43.478 5.77 0.00 0.00 1.63
659 664 3.349488 TCGCGTCCAACTGTAGATATG 57.651 47.619 5.77 0.00 0.00 1.78
748 757 0.250252 TCGTGCATCCAAAGCAGTGA 60.250 50.000 0.00 0.00 43.63 3.41
772 781 1.679680 CCACTTGATGCATGGATGGAC 59.320 52.381 2.46 0.00 35.33 4.02
815 826 5.532406 ACAGGAAATTCCGTATGAATCCATG 59.468 40.000 6.35 0.00 42.97 3.66
816 827 5.048504 CAGGAAATTCCGTATGAATCCATGG 60.049 44.000 4.97 4.97 42.97 3.66
847 863 2.577059 GCAGTTGCATGCATGGCT 59.423 55.556 27.34 16.74 45.77 4.75
848 864 1.811195 GCAGTTGCATGCATGGCTA 59.189 52.632 27.34 13.76 45.77 3.93
849 865 0.526954 GCAGTTGCATGCATGGCTAC 60.527 55.000 27.34 22.71 45.77 3.58
850 866 0.248336 CAGTTGCATGCATGGCTACG 60.248 55.000 27.34 16.38 40.97 3.51
851 867 0.677731 AGTTGCATGCATGGCTACGT 60.678 50.000 27.34 12.77 40.97 3.57
852 868 1.013596 GTTGCATGCATGGCTACGTA 58.986 50.000 27.34 0.00 0.00 3.57
853 869 1.013596 TTGCATGCATGGCTACGTAC 58.986 50.000 27.34 9.08 0.00 3.67
854 870 1.151172 TGCATGCATGGCTACGTACG 61.151 55.000 27.34 15.01 0.00 3.67
855 871 1.831389 GCATGCATGGCTACGTACGG 61.831 60.000 27.34 3.45 0.00 4.02
856 872 0.529773 CATGCATGGCTACGTACGGT 60.530 55.000 21.06 7.87 0.00 4.83
857 873 1.034356 ATGCATGGCTACGTACGGTA 58.966 50.000 21.06 8.62 0.00 4.02
858 874 0.101040 TGCATGGCTACGTACGGTAC 59.899 55.000 21.06 8.25 0.00 3.34
921 963 1.756538 GGGGTTGTCATAAGCCATTGG 59.243 52.381 4.61 0.00 39.46 3.16
943 986 2.022764 TGACATGATAAGGCACACCG 57.977 50.000 0.00 0.00 42.76 4.94
1035 1091 1.680249 GCCTTCCCTGCAAAGACCTAG 60.680 57.143 0.00 0.00 0.00 3.02
1213 1284 4.699522 GGAGCACACCGGGTCACC 62.700 72.222 6.32 0.00 37.03 4.02
1322 1393 1.275291 TCAGAAAAGCCAGGTACTCCG 59.725 52.381 0.00 0.00 34.60 4.63
1339 1421 4.843728 ACTCCGTCCATGTCAAAATACAT 58.156 39.130 0.00 0.00 40.75 2.29
1417 1500 6.842163 ACTTCATGAATGTAAATCACGGAAC 58.158 36.000 8.96 0.00 0.00 3.62
1731 1820 5.902613 TCCCTCGTATGTTTATATACCCG 57.097 43.478 0.00 0.00 31.33 5.28
1867 4894 0.822811 TGCATGTGCTTGGTTGTGTT 59.177 45.000 6.55 0.00 42.66 3.32
1917 4944 9.685828 GTTTGATGTATTGGTTAAGCTTGTAAA 57.314 29.630 9.86 0.00 0.00 2.01
1954 4982 7.094506 GGAAACTAAGTAATTTCCGGACAACAT 60.095 37.037 1.83 0.00 43.26 2.71
1956 4984 6.469410 ACTAAGTAATTTCCGGACAACATGA 58.531 36.000 1.83 0.00 0.00 3.07
1967 4995 3.063997 CGGACAACATGAAATCCTGCTAC 59.936 47.826 0.00 0.00 0.00 3.58
1989 5032 0.441533 GCATATGCAGCTCGAATCGG 59.558 55.000 22.84 0.00 41.59 4.18
1990 5033 0.441533 CATATGCAGCTCGAATCGGC 59.558 55.000 1.76 5.38 0.00 5.54
2017 5060 1.959042 AACATGCATGGAGATCCGAC 58.041 50.000 29.41 0.00 39.43 4.79
2019 5062 1.210234 ACATGCATGGAGATCCGACAA 59.790 47.619 29.41 0.00 39.43 3.18
2020 5063 1.600957 CATGCATGGAGATCCGACAAC 59.399 52.381 19.40 0.00 39.43 3.32
2024 5067 1.667724 CATGGAGATCCGACAACAAGC 59.332 52.381 0.00 0.00 39.43 4.01
2025 5068 0.976641 TGGAGATCCGACAACAAGCT 59.023 50.000 0.00 0.00 39.43 3.74
2026 5069 1.338105 TGGAGATCCGACAACAAGCTG 60.338 52.381 0.00 0.00 39.43 4.24
2027 5070 1.066858 GGAGATCCGACAACAAGCTGA 60.067 52.381 0.00 0.00 0.00 4.26
2028 5071 2.612972 GGAGATCCGACAACAAGCTGAA 60.613 50.000 0.00 0.00 0.00 3.02
2029 5072 3.067106 GAGATCCGACAACAAGCTGAAA 58.933 45.455 0.00 0.00 0.00 2.69
2030 5073 3.476552 AGATCCGACAACAAGCTGAAAA 58.523 40.909 0.00 0.00 0.00 2.29
2031 5074 3.882888 AGATCCGACAACAAGCTGAAAAA 59.117 39.130 0.00 0.00 0.00 1.94
2032 5075 4.520492 AGATCCGACAACAAGCTGAAAAAT 59.480 37.500 0.00 0.00 0.00 1.82
2033 5076 4.223320 TCCGACAACAAGCTGAAAAATC 57.777 40.909 0.00 0.00 0.00 2.17
2034 5077 2.973224 CCGACAACAAGCTGAAAAATCG 59.027 45.455 0.00 0.00 0.00 3.34
2035 5078 3.303725 CCGACAACAAGCTGAAAAATCGA 60.304 43.478 7.79 0.00 0.00 3.59
2036 5079 3.902465 CGACAACAAGCTGAAAAATCGAG 59.098 43.478 0.00 0.00 0.00 4.04
2037 5080 4.552767 CGACAACAAGCTGAAAAATCGAGT 60.553 41.667 0.00 0.00 0.00 4.18
2039 5082 3.795561 ACAAGCTGAAAAATCGAGTCG 57.204 42.857 6.09 6.09 0.00 4.18
2040 5083 2.096218 ACAAGCTGAAAAATCGAGTCGC 60.096 45.455 7.92 0.00 0.00 5.19
2041 5084 1.079503 AGCTGAAAAATCGAGTCGCC 58.920 50.000 7.92 0.00 0.00 5.54
2042 5085 0.097150 GCTGAAAAATCGAGTCGCCC 59.903 55.000 7.92 0.00 0.00 6.13
2043 5086 0.727398 CTGAAAAATCGAGTCGCCCC 59.273 55.000 7.92 0.00 0.00 5.80
2044 5087 0.675522 TGAAAAATCGAGTCGCCCCC 60.676 55.000 7.92 0.00 0.00 5.40
2045 5088 1.702491 GAAAAATCGAGTCGCCCCCG 61.702 60.000 7.92 0.00 0.00 5.73
2060 5104 1.453745 CCCGCCTAACATGCATGGT 60.454 57.895 29.41 26.41 0.00 3.55
2061 5105 1.447317 CCCGCCTAACATGCATGGTC 61.447 60.000 29.41 11.53 0.00 4.02
2062 5106 1.643292 CGCCTAACATGCATGGTCG 59.357 57.895 29.41 19.73 0.00 4.79
2063 5107 1.775039 CGCCTAACATGCATGGTCGG 61.775 60.000 26.87 26.87 33.75 4.79
2065 5109 1.586422 CCTAACATGCATGGTCGGAG 58.414 55.000 27.10 16.57 32.42 4.63
2067 5111 0.541392 TAACATGCATGGTCGGAGCT 59.459 50.000 29.41 3.93 0.00 4.09
2068 5112 1.028330 AACATGCATGGTCGGAGCTG 61.028 55.000 29.41 3.23 0.00 4.24
2069 5113 1.450848 CATGCATGGTCGGAGCTGT 60.451 57.895 19.40 0.00 0.00 4.40
2070 5114 1.028330 CATGCATGGTCGGAGCTGTT 61.028 55.000 19.40 0.00 0.00 3.16
2071 5115 1.028330 ATGCATGGTCGGAGCTGTTG 61.028 55.000 8.82 5.12 0.00 3.33
2072 5116 1.672356 GCATGGTCGGAGCTGTTGT 60.672 57.895 8.82 0.00 0.00 3.32
2073 5117 1.639298 GCATGGTCGGAGCTGTTGTC 61.639 60.000 8.82 0.00 0.00 3.18
2074 5118 1.021390 CATGGTCGGAGCTGTTGTCC 61.021 60.000 8.82 0.00 0.00 4.02
2092 5136 3.086600 GCAGGGGGAGGTGAGAGG 61.087 72.222 0.00 0.00 0.00 3.69
2093 5137 2.366167 CAGGGGGAGGTGAGAGGG 60.366 72.222 0.00 0.00 0.00 4.30
2094 5138 3.700350 AGGGGGAGGTGAGAGGGG 61.700 72.222 0.00 0.00 0.00 4.79
2095 5139 4.825679 GGGGGAGGTGAGAGGGGG 62.826 77.778 0.00 0.00 0.00 5.40
2096 5140 4.026357 GGGGAGGTGAGAGGGGGT 62.026 72.222 0.00 0.00 0.00 4.95
2097 5141 2.125225 GGGAGGTGAGAGGGGGTT 59.875 66.667 0.00 0.00 0.00 4.11
2098 5142 2.301738 GGGAGGTGAGAGGGGGTTG 61.302 68.421 0.00 0.00 0.00 3.77
2099 5143 1.229529 GGAGGTGAGAGGGGGTTGA 60.230 63.158 0.00 0.00 0.00 3.18
2100 5144 0.621862 GGAGGTGAGAGGGGGTTGAT 60.622 60.000 0.00 0.00 0.00 2.57
2101 5145 1.290134 GAGGTGAGAGGGGGTTGATT 58.710 55.000 0.00 0.00 0.00 2.57
2102 5146 0.995024 AGGTGAGAGGGGGTTGATTG 59.005 55.000 0.00 0.00 0.00 2.67
2103 5147 0.681243 GGTGAGAGGGGGTTGATTGC 60.681 60.000 0.00 0.00 0.00 3.56
2104 5148 0.329596 GTGAGAGGGGGTTGATTGCT 59.670 55.000 0.00 0.00 0.00 3.91
2105 5149 1.075601 TGAGAGGGGGTTGATTGCTT 58.924 50.000 0.00 0.00 0.00 3.91
2106 5150 1.428912 TGAGAGGGGGTTGATTGCTTT 59.571 47.619 0.00 0.00 0.00 3.51
2108 5152 2.232208 GAGAGGGGGTTGATTGCTTTTG 59.768 50.000 0.00 0.00 0.00 2.44
2109 5153 1.970640 GAGGGGGTTGATTGCTTTTGT 59.029 47.619 0.00 0.00 0.00 2.83
2110 5154 2.368548 GAGGGGGTTGATTGCTTTTGTT 59.631 45.455 0.00 0.00 0.00 2.83
2112 5156 3.201930 AGGGGGTTGATTGCTTTTGTTTT 59.798 39.130 0.00 0.00 0.00 2.43
2113 5157 3.951037 GGGGGTTGATTGCTTTTGTTTTT 59.049 39.130 0.00 0.00 0.00 1.94
2114 5158 5.104318 AGGGGGTTGATTGCTTTTGTTTTTA 60.104 36.000 0.00 0.00 0.00 1.52
2115 5159 5.238432 GGGGGTTGATTGCTTTTGTTTTTAG 59.762 40.000 0.00 0.00 0.00 1.85
2117 5161 6.710295 GGGGTTGATTGCTTTTGTTTTTAGAT 59.290 34.615 0.00 0.00 0.00 1.98
2118 5162 7.095229 GGGGTTGATTGCTTTTGTTTTTAGATC 60.095 37.037 0.00 0.00 0.00 2.75
2119 5163 7.657354 GGGTTGATTGCTTTTGTTTTTAGATCT 59.343 33.333 0.00 0.00 0.00 2.75
2120 5164 9.691362 GGTTGATTGCTTTTGTTTTTAGATCTA 57.309 29.630 0.00 0.00 0.00 1.98
2123 5167 9.912634 TGATTGCTTTTGTTTTTAGATCTAAGG 57.087 29.630 14.63 0.00 0.00 2.69
2124 5168 9.358872 GATTGCTTTTGTTTTTAGATCTAAGGG 57.641 33.333 14.63 3.12 0.00 3.95
2125 5169 7.227049 TGCTTTTGTTTTTAGATCTAAGGGG 57.773 36.000 14.63 3.56 0.00 4.79
2126 5170 6.210584 TGCTTTTGTTTTTAGATCTAAGGGGG 59.789 38.462 14.63 3.98 0.00 5.40
2127 5171 6.210784 GCTTTTGTTTTTAGATCTAAGGGGGT 59.789 38.462 14.63 0.00 0.00 4.95
2128 5172 7.256190 GCTTTTGTTTTTAGATCTAAGGGGGTT 60.256 37.037 14.63 0.00 0.00 4.11
2129 5173 8.555896 TTTTGTTTTTAGATCTAAGGGGGTTT 57.444 30.769 14.63 0.00 0.00 3.27
2130 5174 9.657728 TTTTGTTTTTAGATCTAAGGGGGTTTA 57.342 29.630 14.63 0.00 0.00 2.01
2131 5175 9.831682 TTTGTTTTTAGATCTAAGGGGGTTTAT 57.168 29.630 14.63 0.00 0.00 1.40
2132 5176 8.817092 TGTTTTTAGATCTAAGGGGGTTTATG 57.183 34.615 14.63 0.00 0.00 1.90
2133 5177 8.395605 TGTTTTTAGATCTAAGGGGGTTTATGT 58.604 33.333 14.63 0.00 0.00 2.29
2134 5178 9.910267 GTTTTTAGATCTAAGGGGGTTTATGTA 57.090 33.333 14.63 0.00 0.00 2.29
2139 5183 8.114301 AGATCTAAGGGGGTTTATGTAAATGT 57.886 34.615 0.00 0.00 0.00 2.71
2140 5184 8.566109 AGATCTAAGGGGGTTTATGTAAATGTT 58.434 33.333 0.00 0.00 0.00 2.71
2141 5185 9.197306 GATCTAAGGGGGTTTATGTAAATGTTT 57.803 33.333 0.00 0.00 0.00 2.83
2142 5186 8.959676 TCTAAGGGGGTTTATGTAAATGTTTT 57.040 30.769 0.00 0.00 0.00 2.43
2143 5187 8.808092 TCTAAGGGGGTTTATGTAAATGTTTTG 58.192 33.333 0.00 0.00 0.00 2.44
2144 5188 5.800296 AGGGGGTTTATGTAAATGTTTTGC 58.200 37.500 0.00 0.00 0.00 3.68
2145 5189 4.938832 GGGGGTTTATGTAAATGTTTTGCC 59.061 41.667 0.00 0.00 0.00 4.52
2146 5190 5.513267 GGGGGTTTATGTAAATGTTTTGCCA 60.513 40.000 0.00 0.00 0.00 4.92
2147 5191 5.998363 GGGGTTTATGTAAATGTTTTGCCAA 59.002 36.000 0.00 0.00 0.00 4.52
2148 5192 6.148645 GGGGTTTATGTAAATGTTTTGCCAAG 59.851 38.462 0.00 0.00 0.00 3.61
2149 5193 6.708502 GGGTTTATGTAAATGTTTTGCCAAGT 59.291 34.615 0.00 0.00 0.00 3.16
2150 5194 7.095397 GGGTTTATGTAAATGTTTTGCCAAGTC 60.095 37.037 0.00 0.00 0.00 3.01
2151 5195 7.439655 GGTTTATGTAAATGTTTTGCCAAGTCA 59.560 33.333 0.00 0.00 0.00 3.41
2152 5196 8.487176 GTTTATGTAAATGTTTTGCCAAGTCAG 58.513 33.333 0.00 0.00 0.00 3.51
2153 5197 4.367450 TGTAAATGTTTTGCCAAGTCAGC 58.633 39.130 0.00 0.00 0.00 4.26
2154 5198 3.825143 AAATGTTTTGCCAAGTCAGCT 57.175 38.095 0.00 0.00 0.00 4.24
2155 5199 3.375782 AATGTTTTGCCAAGTCAGCTC 57.624 42.857 0.00 0.00 0.00 4.09
2156 5200 1.032014 TGTTTTGCCAAGTCAGCTCC 58.968 50.000 0.00 0.00 0.00 4.70
2157 5201 0.315251 GTTTTGCCAAGTCAGCTCCC 59.685 55.000 0.00 0.00 0.00 4.30
2158 5202 1.172180 TTTTGCCAAGTCAGCTCCCG 61.172 55.000 0.00 0.00 0.00 5.14
2159 5203 2.050836 TTTGCCAAGTCAGCTCCCGA 62.051 55.000 0.00 0.00 0.00 5.14
2160 5204 2.435059 GCCAAGTCAGCTCCCGAC 60.435 66.667 0.00 0.00 0.00 4.79
2161 5205 3.059982 CCAAGTCAGCTCCCGACA 58.940 61.111 5.57 0.00 35.77 4.35
2162 5206 1.371183 CCAAGTCAGCTCCCGACAA 59.629 57.895 5.57 0.00 35.77 3.18
2163 5207 0.036010 CCAAGTCAGCTCCCGACAAT 60.036 55.000 5.57 0.00 35.77 2.71
2164 5208 1.363744 CAAGTCAGCTCCCGACAATC 58.636 55.000 5.57 0.00 35.77 2.67
2165 5209 0.250513 AAGTCAGCTCCCGACAATCC 59.749 55.000 5.57 0.00 35.77 3.01
2166 5210 1.519455 GTCAGCTCCCGACAATCCG 60.519 63.158 0.00 0.00 33.43 4.18
2174 5218 4.096003 CGACAATCCGGCCCCACT 62.096 66.667 0.00 0.00 0.00 4.00
2175 5219 2.355115 GACAATCCGGCCCCACTT 59.645 61.111 0.00 0.00 0.00 3.16
2176 5220 2.035626 ACAATCCGGCCCCACTTG 59.964 61.111 0.00 0.00 0.00 3.16
2177 5221 2.035626 CAATCCGGCCCCACTTGT 59.964 61.111 0.00 0.00 0.00 3.16
2178 5222 2.046285 CAATCCGGCCCCACTTGTC 61.046 63.158 0.00 0.00 0.00 3.18
2179 5223 2.534396 AATCCGGCCCCACTTGTCA 61.534 57.895 0.00 0.00 0.00 3.58
2180 5224 2.484287 AATCCGGCCCCACTTGTCAG 62.484 60.000 0.00 0.00 0.00 3.51
2181 5225 3.636231 CCGGCCCCACTTGTCAGA 61.636 66.667 0.00 0.00 0.00 3.27
2182 5226 2.429930 CGGCCCCACTTGTCAGAA 59.570 61.111 0.00 0.00 0.00 3.02
2183 5227 1.228124 CGGCCCCACTTGTCAGAAA 60.228 57.895 0.00 0.00 0.00 2.52
2184 5228 0.821711 CGGCCCCACTTGTCAGAAAA 60.822 55.000 0.00 0.00 0.00 2.29
2185 5229 1.632589 GGCCCCACTTGTCAGAAAAT 58.367 50.000 0.00 0.00 0.00 1.82
2186 5230 1.273327 GGCCCCACTTGTCAGAAAATG 59.727 52.381 0.00 0.00 0.00 2.32
2187 5231 2.238521 GCCCCACTTGTCAGAAAATGA 58.761 47.619 0.00 0.00 34.79 2.57
2188 5232 2.827921 GCCCCACTTGTCAGAAAATGAT 59.172 45.455 0.00 0.00 40.92 2.45
2189 5233 3.259123 GCCCCACTTGTCAGAAAATGATT 59.741 43.478 0.00 0.00 40.92 2.57
2190 5234 4.462483 GCCCCACTTGTCAGAAAATGATTA 59.538 41.667 0.00 0.00 40.92 1.75
2191 5235 5.047377 GCCCCACTTGTCAGAAAATGATTAA 60.047 40.000 0.00 0.00 40.92 1.40
2192 5236 6.518200 GCCCCACTTGTCAGAAAATGATTAAA 60.518 38.462 0.00 0.00 40.92 1.52
2193 5237 6.868339 CCCCACTTGTCAGAAAATGATTAAAC 59.132 38.462 0.00 0.00 40.92 2.01
2194 5238 6.582295 CCCACTTGTCAGAAAATGATTAAACG 59.418 38.462 0.00 0.00 40.92 3.60
2195 5239 7.359595 CCACTTGTCAGAAAATGATTAAACGA 58.640 34.615 0.00 0.00 40.92 3.85
2196 5240 7.323656 CCACTTGTCAGAAAATGATTAAACGAC 59.676 37.037 0.00 0.00 40.92 4.34
2197 5241 7.323656 CACTTGTCAGAAAATGATTAAACGACC 59.676 37.037 0.00 0.00 40.92 4.79
2198 5242 7.228706 ACTTGTCAGAAAATGATTAAACGACCT 59.771 33.333 0.00 0.00 40.92 3.85
2199 5243 8.610248 TTGTCAGAAAATGATTAAACGACCTA 57.390 30.769 0.00 0.00 40.92 3.08
2200 5244 8.610248 TGTCAGAAAATGATTAAACGACCTAA 57.390 30.769 0.00 0.00 40.92 2.69
2201 5245 9.058174 TGTCAGAAAATGATTAAACGACCTAAA 57.942 29.630 0.00 0.00 40.92 1.85
2208 5252 9.840427 AAATGATTAAACGACCTAAATCACTTG 57.160 29.630 0.00 0.00 40.18 3.16
2209 5253 8.786826 ATGATTAAACGACCTAAATCACTTGA 57.213 30.769 0.00 0.00 40.18 3.02
2210 5254 8.786826 TGATTAAACGACCTAAATCACTTGAT 57.213 30.769 0.00 0.00 34.34 2.57
2211 5255 9.226606 TGATTAAACGACCTAAATCACTTGATT 57.773 29.630 0.00 0.00 45.91 2.57
2216 5260 7.016361 ACGACCTAAATCACTTGATTAATGC 57.984 36.000 4.89 0.00 43.41 3.56
2217 5261 6.823689 ACGACCTAAATCACTTGATTAATGCT 59.176 34.615 4.89 0.00 43.41 3.79
2218 5262 7.336931 ACGACCTAAATCACTTGATTAATGCTT 59.663 33.333 4.89 0.00 43.41 3.91
2219 5263 8.184192 CGACCTAAATCACTTGATTAATGCTTT 58.816 33.333 4.89 0.00 43.41 3.51
2220 5264 9.860898 GACCTAAATCACTTGATTAATGCTTTT 57.139 29.630 4.89 0.00 43.41 2.27
2244 5288 7.672351 TTACAAAAAGTTTACTGAATGTGCG 57.328 32.000 4.97 0.00 0.00 5.34
2245 5289 5.040635 ACAAAAAGTTTACTGAATGTGCGG 58.959 37.500 4.97 0.00 0.00 5.69
2246 5290 4.911514 AAAAGTTTACTGAATGTGCGGT 57.088 36.364 0.00 0.00 0.00 5.68
2247 5291 3.896648 AAGTTTACTGAATGTGCGGTG 57.103 42.857 0.00 0.00 0.00 4.94
2248 5292 2.846193 AGTTTACTGAATGTGCGGTGT 58.154 42.857 0.00 0.00 0.00 4.16
2249 5293 3.211045 AGTTTACTGAATGTGCGGTGTT 58.789 40.909 0.00 0.00 0.00 3.32
2250 5294 3.250040 AGTTTACTGAATGTGCGGTGTTC 59.750 43.478 0.00 0.00 0.00 3.18
2251 5295 2.831685 TACTGAATGTGCGGTGTTCT 57.168 45.000 0.00 0.00 0.00 3.01
2252 5296 1.967319 ACTGAATGTGCGGTGTTCTT 58.033 45.000 0.00 0.00 0.00 2.52
2253 5297 2.297701 ACTGAATGTGCGGTGTTCTTT 58.702 42.857 0.00 0.00 0.00 2.52
2254 5298 2.033299 ACTGAATGTGCGGTGTTCTTTG 59.967 45.455 0.00 0.00 0.00 2.77
2255 5299 1.268999 TGAATGTGCGGTGTTCTTTGC 60.269 47.619 0.00 0.00 0.00 3.68
2256 5300 0.743688 AATGTGCGGTGTTCTTTGCA 59.256 45.000 0.00 0.00 34.44 4.08
2257 5301 0.743688 ATGTGCGGTGTTCTTTGCAA 59.256 45.000 0.00 0.00 39.34 4.08
2258 5302 0.528017 TGTGCGGTGTTCTTTGCAAA 59.472 45.000 12.14 12.14 39.34 3.68
2259 5303 1.067565 TGTGCGGTGTTCTTTGCAAAA 60.068 42.857 13.84 1.75 39.34 2.44
2260 5304 1.996191 GTGCGGTGTTCTTTGCAAAAA 59.004 42.857 13.84 7.86 39.34 1.94
2288 5332 3.245518 ACCTGTTGGTTTTCTGCAAAC 57.754 42.857 0.00 0.00 46.05 2.93
2292 5336 3.443037 TGTTGGTTTTCTGCAAACGATG 58.557 40.909 0.00 0.00 45.25 3.84
2303 5347 2.267188 CAAACGATGCCTCCAATGTG 57.733 50.000 0.00 0.00 0.00 3.21
2304 5348 1.135315 CAAACGATGCCTCCAATGTGG 60.135 52.381 0.00 0.00 39.43 4.17
2315 5503 1.137872 TCCAATGTGGTGGTTTTGTGC 59.862 47.619 0.00 0.00 39.03 4.57
2316 5504 1.134580 CCAATGTGGTGGTTTTGTGCA 60.135 47.619 0.00 0.00 33.63 4.57
2317 5505 2.625737 CAATGTGGTGGTTTTGTGCAA 58.374 42.857 0.00 0.00 0.00 4.08
2320 5508 4.679373 ATGTGGTGGTTTTGTGCAATTA 57.321 36.364 0.00 0.00 0.00 1.40
2322 5510 4.184629 TGTGGTGGTTTTGTGCAATTAAC 58.815 39.130 0.00 0.00 0.00 2.01
2324 5512 4.506288 GTGGTGGTTTTGTGCAATTAACTC 59.494 41.667 0.00 0.00 0.00 3.01
2325 5513 3.733727 GGTGGTTTTGTGCAATTAACTCG 59.266 43.478 0.00 0.00 0.00 4.18
2327 5515 3.381908 TGGTTTTGTGCAATTAACTCGGT 59.618 39.130 0.00 0.00 0.00 4.69
2330 5518 3.634568 TTGTGCAATTAACTCGGTTGG 57.365 42.857 0.00 0.00 0.00 3.77
2331 5519 1.268352 TGTGCAATTAACTCGGTTGGC 59.732 47.619 0.00 0.00 0.00 4.52
2332 5520 0.885196 TGCAATTAACTCGGTTGGCC 59.115 50.000 0.00 0.00 0.00 5.36
2342 5530 3.578456 GGTTGGCCGTCATGTCTG 58.422 61.111 0.00 0.00 0.00 3.51
2344 5532 1.302511 GTTGGCCGTCATGTCTGGT 60.303 57.895 0.00 0.00 0.00 4.00
2346 5534 0.687920 TTGGCCGTCATGTCTGGTTA 59.312 50.000 0.00 0.00 0.00 2.85
2347 5535 0.249120 TGGCCGTCATGTCTGGTTAG 59.751 55.000 0.00 0.00 0.00 2.34
2348 5536 0.462047 GGCCGTCATGTCTGGTTAGG 60.462 60.000 0.00 0.00 0.00 2.69
2349 5537 1.090052 GCCGTCATGTCTGGTTAGGC 61.090 60.000 0.00 0.00 36.32 3.93
2350 5538 0.462047 CCGTCATGTCTGGTTAGGCC 60.462 60.000 0.00 0.00 37.90 5.19
2351 5539 0.249120 CGTCATGTCTGGTTAGGCCA 59.751 55.000 5.01 0.00 46.95 5.36
2360 5548 2.751688 GTTAGGCCAACCCGGTGA 59.248 61.111 5.01 0.00 39.21 4.02
2361 5549 1.301954 GTTAGGCCAACCCGGTGAT 59.698 57.895 5.01 0.00 39.21 3.06
2362 5550 0.746923 GTTAGGCCAACCCGGTGATC 60.747 60.000 5.01 0.00 39.21 2.92
2363 5551 0.912487 TTAGGCCAACCCGGTGATCT 60.912 55.000 5.01 0.00 39.21 2.75
2364 5552 0.912487 TAGGCCAACCCGGTGATCTT 60.912 55.000 5.01 0.00 39.21 2.40
2365 5553 1.304134 GGCCAACCCGGTGATCTTT 60.304 57.895 0.00 0.00 36.97 2.52
2366 5554 0.898326 GGCCAACCCGGTGATCTTTT 60.898 55.000 0.00 0.00 36.97 2.27
2367 5555 0.243636 GCCAACCCGGTGATCTTTTG 59.756 55.000 0.00 0.00 36.97 2.44
2368 5556 1.616159 CCAACCCGGTGATCTTTTGT 58.384 50.000 0.00 0.00 0.00 2.83
2369 5557 1.539827 CCAACCCGGTGATCTTTTGTC 59.460 52.381 0.00 0.00 0.00 3.18
2370 5558 1.539827 CAACCCGGTGATCTTTTGTCC 59.460 52.381 0.00 0.00 0.00 4.02
2371 5559 0.321298 ACCCGGTGATCTTTTGTCCG 60.321 55.000 0.00 0.00 40.72 4.79
2372 5560 0.321298 CCCGGTGATCTTTTGTCCGT 60.321 55.000 0.00 0.00 39.62 4.69
2373 5561 1.076332 CCGGTGATCTTTTGTCCGTC 58.924 55.000 0.00 0.00 39.62 4.79
2374 5562 1.076332 CGGTGATCTTTTGTCCGTCC 58.924 55.000 0.00 0.00 36.99 4.79
2375 5563 1.337823 CGGTGATCTTTTGTCCGTCCT 60.338 52.381 0.00 0.00 36.99 3.85
2376 5564 2.076863 GGTGATCTTTTGTCCGTCCTG 58.923 52.381 0.00 0.00 0.00 3.86
2377 5565 2.550208 GGTGATCTTTTGTCCGTCCTGT 60.550 50.000 0.00 0.00 0.00 4.00
2378 5566 3.306502 GGTGATCTTTTGTCCGTCCTGTA 60.307 47.826 0.00 0.00 0.00 2.74
2379 5567 4.312443 GTGATCTTTTGTCCGTCCTGTAA 58.688 43.478 0.00 0.00 0.00 2.41
2380 5568 4.753107 GTGATCTTTTGTCCGTCCTGTAAA 59.247 41.667 0.00 0.00 0.00 2.01
2381 5569 4.753107 TGATCTTTTGTCCGTCCTGTAAAC 59.247 41.667 0.00 0.00 0.00 2.01
2382 5570 3.125316 TCTTTTGTCCGTCCTGTAAACG 58.875 45.455 0.00 0.00 39.78 3.60
2383 5571 2.600470 TTTGTCCGTCCTGTAAACGT 57.400 45.000 0.00 0.00 38.44 3.99
2384 5572 2.600470 TTGTCCGTCCTGTAAACGTT 57.400 45.000 0.00 0.00 38.44 3.99
2385 5573 1.855513 TGTCCGTCCTGTAAACGTTG 58.144 50.000 0.00 0.00 38.44 4.10
2386 5574 1.136695 TGTCCGTCCTGTAAACGTTGT 59.863 47.619 0.00 0.00 38.44 3.32
2387 5575 1.523934 GTCCGTCCTGTAAACGTTGTG 59.476 52.381 0.00 0.00 38.44 3.33
2388 5576 1.408340 TCCGTCCTGTAAACGTTGTGA 59.592 47.619 0.00 0.00 38.44 3.58
2389 5577 2.036217 TCCGTCCTGTAAACGTTGTGAT 59.964 45.455 0.00 0.00 38.44 3.06
2390 5578 2.156891 CCGTCCTGTAAACGTTGTGATG 59.843 50.000 0.00 0.14 38.44 3.07
2391 5579 3.054166 CGTCCTGTAAACGTTGTGATGA 58.946 45.455 0.00 0.00 35.47 2.92
2392 5580 3.678072 CGTCCTGTAAACGTTGTGATGAT 59.322 43.478 0.00 0.00 35.47 2.45
2393 5581 4.151689 CGTCCTGTAAACGTTGTGATGATT 59.848 41.667 0.00 0.00 35.47 2.57
2394 5582 5.618561 GTCCTGTAAACGTTGTGATGATTC 58.381 41.667 0.00 0.00 0.00 2.52
2395 5583 5.178623 GTCCTGTAAACGTTGTGATGATTCA 59.821 40.000 0.00 0.00 0.00 2.57
2396 5584 5.760743 TCCTGTAAACGTTGTGATGATTCAA 59.239 36.000 0.00 0.00 32.48 2.69
2397 5585 6.429692 TCCTGTAAACGTTGTGATGATTCAAT 59.570 34.615 0.00 0.00 32.48 2.57
2398 5586 7.604545 TCCTGTAAACGTTGTGATGATTCAATA 59.395 33.333 0.00 0.00 32.48 1.90
2399 5587 8.233868 CCTGTAAACGTTGTGATGATTCAATAA 58.766 33.333 0.00 0.00 32.48 1.40
2400 5588 9.605955 CTGTAAACGTTGTGATGATTCAATAAA 57.394 29.630 0.00 0.00 32.48 1.40
2401 5589 9.605955 TGTAAACGTTGTGATGATTCAATAAAG 57.394 29.630 0.00 0.00 32.48 1.85
2402 5590 7.566858 AAACGTTGTGATGATTCAATAAAGC 57.433 32.000 0.00 0.00 32.48 3.51
2403 5591 6.500684 ACGTTGTGATGATTCAATAAAGCT 57.499 33.333 0.00 0.00 32.48 3.74
2404 5592 6.913170 ACGTTGTGATGATTCAATAAAGCTT 58.087 32.000 0.00 0.00 32.48 3.74
2405 5593 7.023575 ACGTTGTGATGATTCAATAAAGCTTC 58.976 34.615 0.00 0.00 32.48 3.86
2406 5594 6.193410 CGTTGTGATGATTCAATAAAGCTTCG 59.807 38.462 0.00 0.00 31.86 3.79
2407 5595 5.572211 TGTGATGATTCAATAAAGCTTCGC 58.428 37.500 0.00 0.00 38.02 4.70
2408 5596 4.667948 GTGATGATTCAATAAAGCTTCGCG 59.332 41.667 0.00 0.00 31.21 5.87
2409 5597 4.570369 TGATGATTCAATAAAGCTTCGCGA 59.430 37.500 3.71 3.71 31.86 5.87
2410 5598 4.520743 TGATTCAATAAAGCTTCGCGAG 57.479 40.909 9.59 4.97 0.00 5.03
2411 5599 4.180817 TGATTCAATAAAGCTTCGCGAGA 58.819 39.130 9.59 0.00 39.20 4.04
2412 5600 4.811024 TGATTCAATAAAGCTTCGCGAGAT 59.189 37.500 9.59 0.00 41.60 2.75
2413 5601 5.294306 TGATTCAATAAAGCTTCGCGAGATT 59.706 36.000 9.59 6.06 41.60 2.40
2414 5602 4.520743 TCAATAAAGCTTCGCGAGATTG 57.479 40.909 9.59 12.89 41.60 2.67
2415 5603 3.031812 CAATAAAGCTTCGCGAGATTGC 58.968 45.455 9.59 12.72 41.60 3.56
2416 5604 1.006832 TAAAGCTTCGCGAGATTGCC 58.993 50.000 9.59 0.00 41.60 4.52
2417 5605 0.674895 AAAGCTTCGCGAGATTGCCT 60.675 50.000 9.59 0.00 41.60 4.75
2418 5606 0.175760 AAGCTTCGCGAGATTGCCTA 59.824 50.000 9.59 0.00 41.60 3.93
2419 5607 0.175760 AGCTTCGCGAGATTGCCTAA 59.824 50.000 9.59 0.00 41.60 2.69
2420 5608 1.006832 GCTTCGCGAGATTGCCTAAA 58.993 50.000 9.59 0.00 41.60 1.85
2421 5609 1.396996 GCTTCGCGAGATTGCCTAAAA 59.603 47.619 9.59 0.00 41.60 1.52
2422 5610 2.159572 GCTTCGCGAGATTGCCTAAAAA 60.160 45.455 9.59 0.00 41.60 1.94
2437 5625 3.087343 AAAAATGCTTGGGGGAGGG 57.913 52.632 0.00 0.00 0.00 4.30
2438 5626 0.547471 AAAAATGCTTGGGGGAGGGG 60.547 55.000 0.00 0.00 0.00 4.79
2439 5627 2.475660 AAAATGCTTGGGGGAGGGGG 62.476 60.000 0.00 0.00 0.00 5.40
2454 5642 2.621486 GGGGGTCCTACTTGATGCT 58.379 57.895 0.00 0.00 0.00 3.79
2455 5643 0.470341 GGGGGTCCTACTTGATGCTC 59.530 60.000 0.00 0.00 0.00 4.26
2456 5644 1.204146 GGGGTCCTACTTGATGCTCA 58.796 55.000 0.00 0.00 0.00 4.26
2457 5645 1.771255 GGGGTCCTACTTGATGCTCAT 59.229 52.381 0.00 0.00 0.00 2.90
2458 5646 2.972713 GGGGTCCTACTTGATGCTCATA 59.027 50.000 0.00 0.00 0.00 2.15
2459 5647 3.391296 GGGGTCCTACTTGATGCTCATAA 59.609 47.826 0.00 0.00 0.00 1.90
2460 5648 4.042187 GGGGTCCTACTTGATGCTCATAAT 59.958 45.833 0.00 0.00 0.00 1.28
2461 5649 5.248477 GGGGTCCTACTTGATGCTCATAATA 59.752 44.000 0.00 0.00 0.00 0.98
2462 5650 6.239887 GGGGTCCTACTTGATGCTCATAATAA 60.240 42.308 0.00 0.00 0.00 1.40
2463 5651 7.398024 GGGTCCTACTTGATGCTCATAATAAT 58.602 38.462 0.00 0.00 0.00 1.28
2464 5652 8.540388 GGGTCCTACTTGATGCTCATAATAATA 58.460 37.037 0.00 0.00 0.00 0.98
2465 5653 9.944376 GGTCCTACTTGATGCTCATAATAATAA 57.056 33.333 0.00 0.00 0.00 1.40
2488 5676 9.935241 ATAAATAAGTGCATCTACAGTGATAGG 57.065 33.333 0.00 0.00 0.00 2.57
2489 5677 3.742433 AGTGCATCTACAGTGATAGGC 57.258 47.619 0.00 0.00 0.00 3.93
2490 5678 3.033909 AGTGCATCTACAGTGATAGGCA 58.966 45.455 0.00 0.00 0.00 4.75
2491 5679 3.452264 AGTGCATCTACAGTGATAGGCAA 59.548 43.478 0.00 0.00 30.67 4.52
2492 5680 3.557595 GTGCATCTACAGTGATAGGCAAC 59.442 47.826 0.00 0.00 30.67 4.17
2493 5681 3.134458 GCATCTACAGTGATAGGCAACC 58.866 50.000 0.00 0.00 37.17 3.77
2494 5682 3.181461 GCATCTACAGTGATAGGCAACCT 60.181 47.826 0.00 0.00 37.71 3.50
2495 5683 4.684485 GCATCTACAGTGATAGGCAACCTT 60.684 45.833 0.00 0.00 34.61 3.50
2496 5684 5.431765 CATCTACAGTGATAGGCAACCTTT 58.568 41.667 0.00 0.00 34.61 3.11
2497 5685 5.499004 TCTACAGTGATAGGCAACCTTTT 57.501 39.130 0.00 0.00 34.61 2.27
2498 5686 5.488341 TCTACAGTGATAGGCAACCTTTTC 58.512 41.667 0.00 0.00 34.61 2.29
2499 5687 4.373156 ACAGTGATAGGCAACCTTTTCT 57.627 40.909 0.00 0.00 34.61 2.52
2500 5688 4.729868 ACAGTGATAGGCAACCTTTTCTT 58.270 39.130 0.00 0.00 34.61 2.52
2501 5689 5.876357 ACAGTGATAGGCAACCTTTTCTTA 58.124 37.500 0.00 0.00 34.61 2.10
2502 5690 5.705905 ACAGTGATAGGCAACCTTTTCTTAC 59.294 40.000 0.00 0.00 34.61 2.34
2503 5691 5.123979 CAGTGATAGGCAACCTTTTCTTACC 59.876 44.000 0.00 0.00 34.61 2.85
2504 5692 5.014228 AGTGATAGGCAACCTTTTCTTACCT 59.986 40.000 0.00 0.00 34.61 3.08
2505 5693 6.214819 AGTGATAGGCAACCTTTTCTTACCTA 59.785 38.462 0.00 0.00 34.61 3.08
2506 5694 7.054751 GTGATAGGCAACCTTTTCTTACCTAT 58.945 38.462 0.00 0.00 40.76 2.57
2507 5695 7.556635 GTGATAGGCAACCTTTTCTTACCTATT 59.443 37.037 0.00 0.00 38.74 1.73
2508 5696 8.113462 TGATAGGCAACCTTTTCTTACCTATTT 58.887 33.333 0.00 0.00 38.74 1.40
2509 5697 6.835819 AGGCAACCTTTTCTTACCTATTTC 57.164 37.500 0.00 0.00 37.17 2.17
2510 5698 6.311735 AGGCAACCTTTTCTTACCTATTTCA 58.688 36.000 0.00 0.00 37.17 2.69
2511 5699 6.208797 AGGCAACCTTTTCTTACCTATTTCAC 59.791 38.462 0.00 0.00 37.17 3.18
2512 5700 6.015772 GGCAACCTTTTCTTACCTATTTCACA 60.016 38.462 0.00 0.00 0.00 3.58
2513 5701 7.309805 GGCAACCTTTTCTTACCTATTTCACAT 60.310 37.037 0.00 0.00 0.00 3.21
2514 5702 7.755373 GCAACCTTTTCTTACCTATTTCACATC 59.245 37.037 0.00 0.00 0.00 3.06
2515 5703 8.792633 CAACCTTTTCTTACCTATTTCACATCA 58.207 33.333 0.00 0.00 0.00 3.07
2516 5704 9.533831 AACCTTTTCTTACCTATTTCACATCAT 57.466 29.630 0.00 0.00 0.00 2.45
2554 5742 9.444600 ACAAAACATGTTATAGTAGAACGGATT 57.555 29.630 12.39 0.00 40.06 3.01
2594 5782 9.920946 ATCTCTACCATTAAATTTTAAGAGGCA 57.079 29.630 16.90 8.49 32.09 4.75
2595 5783 9.174166 TCTCTACCATTAAATTTTAAGAGGCAC 57.826 33.333 16.90 0.00 32.09 5.01
2608 5796 8.658840 TTTTAAGAGGCACTAAATTATTGGGT 57.341 30.769 0.00 0.00 41.55 4.51
2609 5797 7.639113 TTAAGAGGCACTAAATTATTGGGTG 57.361 36.000 6.30 6.30 41.55 4.61
2610 5798 5.450818 AGAGGCACTAAATTATTGGGTGA 57.549 39.130 12.32 0.00 41.55 4.02
2611 5799 6.018433 AGAGGCACTAAATTATTGGGTGAT 57.982 37.500 12.32 3.12 41.55 3.06
2612 5800 7.149202 AGAGGCACTAAATTATTGGGTGATA 57.851 36.000 12.32 0.00 41.55 2.15
2613 5801 7.582719 AGAGGCACTAAATTATTGGGTGATAA 58.417 34.615 12.32 0.00 41.55 1.75
2614 5802 8.058847 AGAGGCACTAAATTATTGGGTGATAAA 58.941 33.333 12.32 0.00 41.55 1.40
2615 5803 8.602472 AGGCACTAAATTATTGGGTGATAAAA 57.398 30.769 12.32 0.00 36.02 1.52
2616 5804 8.695456 AGGCACTAAATTATTGGGTGATAAAAG 58.305 33.333 12.32 0.00 36.02 2.27
2617 5805 7.926018 GGCACTAAATTATTGGGTGATAAAAGG 59.074 37.037 12.32 0.00 0.00 3.11
2618 5806 7.438160 GCACTAAATTATTGGGTGATAAAAGGC 59.562 37.037 12.32 0.00 0.00 4.35
2619 5807 8.474025 CACTAAATTATTGGGTGATAAAAGGCA 58.526 33.333 5.15 0.00 0.00 4.75
2620 5808 9.212593 ACTAAATTATTGGGTGATAAAAGGCAT 57.787 29.630 0.00 0.00 0.00 4.40
2621 5809 9.696917 CTAAATTATTGGGTGATAAAAGGCATC 57.303 33.333 0.00 0.00 0.00 3.91
2622 5810 7.919385 AATTATTGGGTGATAAAAGGCATCT 57.081 32.000 0.00 0.00 0.00 2.90
2623 5811 6.959639 TTATTGGGTGATAAAAGGCATCTC 57.040 37.500 0.00 0.00 0.00 2.75
2624 5812 2.917933 TGGGTGATAAAAGGCATCTCG 58.082 47.619 0.00 0.00 0.00 4.04
2625 5813 2.238646 TGGGTGATAAAAGGCATCTCGT 59.761 45.455 0.00 0.00 0.00 4.18
2626 5814 3.452990 TGGGTGATAAAAGGCATCTCGTA 59.547 43.478 0.00 0.00 0.00 3.43
2627 5815 3.808174 GGGTGATAAAAGGCATCTCGTAC 59.192 47.826 0.00 0.00 0.00 3.67
2628 5816 3.489785 GGTGATAAAAGGCATCTCGTACG 59.510 47.826 9.53 9.53 0.00 3.67
2629 5817 4.357142 GTGATAAAAGGCATCTCGTACGA 58.643 43.478 18.41 18.41 0.00 3.43
2630 5818 4.802039 GTGATAAAAGGCATCTCGTACGAA 59.198 41.667 20.00 10.69 0.00 3.85
2631 5819 5.462398 GTGATAAAAGGCATCTCGTACGAAT 59.538 40.000 20.00 12.47 0.00 3.34
2632 5820 6.018994 GTGATAAAAGGCATCTCGTACGAATT 60.019 38.462 20.00 6.61 0.00 2.17
2633 5821 4.600012 AAAAGGCATCTCGTACGAATTG 57.400 40.909 20.00 18.86 0.00 2.32
2634 5822 3.520290 AAGGCATCTCGTACGAATTGA 57.480 42.857 23.77 16.83 0.00 2.57
2635 5823 3.520290 AGGCATCTCGTACGAATTGAA 57.480 42.857 23.77 8.34 0.00 2.69
2636 5824 3.857052 AGGCATCTCGTACGAATTGAAA 58.143 40.909 23.77 6.86 0.00 2.69
2637 5825 4.250464 AGGCATCTCGTACGAATTGAAAA 58.750 39.130 23.77 5.41 0.00 2.29
2638 5826 4.693566 AGGCATCTCGTACGAATTGAAAAA 59.306 37.500 23.77 0.13 0.00 1.94
2639 5827 5.354234 AGGCATCTCGTACGAATTGAAAAAT 59.646 36.000 23.77 2.20 0.00 1.82
2640 5828 5.452302 GGCATCTCGTACGAATTGAAAAATG 59.548 40.000 23.77 12.93 0.00 2.32
2641 5829 6.021596 GCATCTCGTACGAATTGAAAAATGT 58.978 36.000 23.77 1.29 0.00 2.71
2642 5830 6.523201 GCATCTCGTACGAATTGAAAAATGTT 59.477 34.615 23.77 2.48 0.00 2.71
2643 5831 7.060633 GCATCTCGTACGAATTGAAAAATGTTT 59.939 33.333 23.77 0.09 0.00 2.83
2644 5832 8.901748 CATCTCGTACGAATTGAAAAATGTTTT 58.098 29.630 20.00 0.00 0.00 2.43
2677 5865 9.443283 CTTTTTAAGGAATCATCTATTTGCTCG 57.557 33.333 0.00 0.00 0.00 5.03
2678 5866 8.731275 TTTTAAGGAATCATCTATTTGCTCGA 57.269 30.769 0.00 0.00 0.00 4.04
2679 5867 7.953158 TTAAGGAATCATCTATTTGCTCGAG 57.047 36.000 8.45 8.45 0.00 4.04
2680 5868 5.798125 AGGAATCATCTATTTGCTCGAGA 57.202 39.130 18.75 0.00 0.00 4.04
2681 5869 6.166984 AGGAATCATCTATTTGCTCGAGAA 57.833 37.500 18.75 1.15 0.00 2.87
2682 5870 6.222389 AGGAATCATCTATTTGCTCGAGAAG 58.778 40.000 18.75 4.80 0.00 2.85
2683 5871 5.407995 GGAATCATCTATTTGCTCGAGAAGG 59.592 44.000 18.75 0.32 0.00 3.46
2684 5872 3.722147 TCATCTATTTGCTCGAGAAGGC 58.278 45.455 18.75 1.14 0.00 4.35
2685 5873 3.132824 TCATCTATTTGCTCGAGAAGGCA 59.867 43.478 18.75 4.47 36.62 4.75
2686 5874 3.610040 TCTATTTGCTCGAGAAGGCAA 57.390 42.857 18.75 11.42 45.06 4.52
2687 5875 3.525537 TCTATTTGCTCGAGAAGGCAAG 58.474 45.455 18.75 5.73 46.75 4.01
2688 5876 1.457346 ATTTGCTCGAGAAGGCAAGG 58.543 50.000 18.75 0.00 46.75 3.61
2689 5877 0.606401 TTTGCTCGAGAAGGCAAGGG 60.606 55.000 18.75 0.00 46.75 3.95
2690 5878 1.768684 TTGCTCGAGAAGGCAAGGGT 61.769 55.000 18.75 0.00 42.45 4.34
2691 5879 0.902984 TGCTCGAGAAGGCAAGGGTA 60.903 55.000 18.75 0.00 35.40 3.69
2692 5880 0.466124 GCTCGAGAAGGCAAGGGTAT 59.534 55.000 18.75 0.00 0.00 2.73
2693 5881 1.808133 GCTCGAGAAGGCAAGGGTATG 60.808 57.143 18.75 0.00 0.00 2.39
2694 5882 1.482593 CTCGAGAAGGCAAGGGTATGT 59.517 52.381 6.58 0.00 0.00 2.29
2695 5883 1.906574 TCGAGAAGGCAAGGGTATGTT 59.093 47.619 0.00 0.00 0.00 2.71
2696 5884 2.093658 TCGAGAAGGCAAGGGTATGTTC 60.094 50.000 0.00 0.00 0.00 3.18
2697 5885 2.093447 CGAGAAGGCAAGGGTATGTTCT 60.093 50.000 0.00 0.00 0.00 3.01
2698 5886 3.619979 CGAGAAGGCAAGGGTATGTTCTT 60.620 47.826 0.00 0.00 0.00 2.52
2699 5887 3.942115 GAGAAGGCAAGGGTATGTTCTTC 59.058 47.826 0.00 0.00 35.23 2.87
2700 5888 3.330701 AGAAGGCAAGGGTATGTTCTTCA 59.669 43.478 0.00 0.00 36.31 3.02
2701 5889 4.018050 AGAAGGCAAGGGTATGTTCTTCAT 60.018 41.667 0.00 0.00 36.31 2.57
2702 5890 4.322057 AGGCAAGGGTATGTTCTTCATT 57.678 40.909 0.00 0.00 37.91 2.57
2703 5891 4.677182 AGGCAAGGGTATGTTCTTCATTT 58.323 39.130 0.00 0.00 37.91 2.32
2704 5892 5.086621 AGGCAAGGGTATGTTCTTCATTTT 58.913 37.500 0.00 0.00 37.91 1.82
2705 5893 5.543790 AGGCAAGGGTATGTTCTTCATTTTT 59.456 36.000 0.00 0.00 37.91 1.94
2706 5894 5.869344 GGCAAGGGTATGTTCTTCATTTTTC 59.131 40.000 0.00 0.00 37.91 2.29
2707 5895 6.454795 GCAAGGGTATGTTCTTCATTTTTCA 58.545 36.000 0.00 0.00 37.91 2.69
2708 5896 7.099120 GCAAGGGTATGTTCTTCATTTTTCAT 58.901 34.615 0.00 0.00 37.91 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 7.791766 TCCAGGAGATAAGATTAGATCCAAAGT 59.208 37.037 8.00 0.00 0.00 2.66
112 113 4.899352 ATTCAGCTTCTGTACTTGACCT 57.101 40.909 0.00 0.00 32.61 3.85
219 221 7.698130 GCTCTCAAATTATCACACCATAAACAC 59.302 37.037 0.00 0.00 0.00 3.32
359 362 1.886222 CGGCCACTTGATCCTTGGAAA 60.886 52.381 2.24 0.00 31.39 3.13
439 442 6.042208 CCCTCCCTTAATCTCAACTAACCTAG 59.958 46.154 0.00 0.00 0.00 3.02
480 483 4.790790 AGGGAAGGAGGTTGAGATTACAAT 59.209 41.667 0.00 0.00 32.36 2.71
515 519 9.092876 CAAGATAATACAAGAGGAGTTTGAGAC 57.907 37.037 0.00 0.00 0.00 3.36
630 635 2.535984 CAGTTGGACGCGAAGTGATATC 59.464 50.000 15.93 0.00 43.07 1.63
631 636 2.094182 ACAGTTGGACGCGAAGTGATAT 60.094 45.455 15.93 0.00 43.07 1.63
632 637 1.271379 ACAGTTGGACGCGAAGTGATA 59.729 47.619 15.93 0.00 43.07 2.15
633 638 0.033504 ACAGTTGGACGCGAAGTGAT 59.966 50.000 15.93 0.00 43.07 3.06
634 639 0.669619 TACAGTTGGACGCGAAGTGA 59.330 50.000 15.93 0.00 43.07 3.41
636 641 0.956633 TCTACAGTTGGACGCGAAGT 59.043 50.000 15.93 0.00 0.00 3.01
637 642 2.279582 ATCTACAGTTGGACGCGAAG 57.720 50.000 15.93 0.00 0.00 3.79
638 643 3.702330 CATATCTACAGTTGGACGCGAA 58.298 45.455 15.93 0.00 0.00 4.70
639 644 2.543031 GCATATCTACAGTTGGACGCGA 60.543 50.000 15.93 0.00 0.00 5.87
640 645 1.787155 GCATATCTACAGTTGGACGCG 59.213 52.381 3.53 3.53 0.00 6.01
641 646 2.135933 GGCATATCTACAGTTGGACGC 58.864 52.381 0.00 0.00 0.00 5.19
642 647 3.384668 CTGGCATATCTACAGTTGGACG 58.615 50.000 0.00 0.00 0.00 4.79
643 648 3.134458 GCTGGCATATCTACAGTTGGAC 58.866 50.000 0.00 0.00 34.79 4.02
644 649 2.104792 GGCTGGCATATCTACAGTTGGA 59.895 50.000 0.00 0.00 34.79 3.53
645 650 2.498167 GGCTGGCATATCTACAGTTGG 58.502 52.381 0.00 0.00 34.79 3.77
646 651 2.138320 CGGCTGGCATATCTACAGTTG 58.862 52.381 1.08 0.00 34.79 3.16
647 652 1.070758 CCGGCTGGCATATCTACAGTT 59.929 52.381 0.00 0.00 34.79 3.16
648 653 0.681733 CCGGCTGGCATATCTACAGT 59.318 55.000 0.00 0.00 34.79 3.55
649 654 3.521995 CCGGCTGGCATATCTACAG 57.478 57.895 0.00 0.00 35.40 2.74
677 682 2.374184 TGAATTTGTAATCCTGGCCGG 58.626 47.619 3.88 3.88 0.00 6.13
679 684 6.691508 GGATTATGAATTTGTAATCCTGGCC 58.308 40.000 22.87 0.00 46.66 5.36
748 757 0.608856 TCCATGCATCAAGTGGCGTT 60.609 50.000 0.00 0.00 33.01 4.84
772 781 7.374975 TCCTGTAATTTGTTCTAGATAGGGG 57.625 40.000 0.00 0.00 0.00 4.79
841 857 3.153364 CGTACCGTACGTAGCCATG 57.847 57.895 20.61 0.00 46.41 3.66
860 876 1.800805 CCTTATCATGGCCTGCGTAG 58.199 55.000 3.32 0.00 0.00 3.51
921 963 2.098117 GGTGTGCCTTATCATGTCAAGC 59.902 50.000 0.00 0.00 0.00 4.01
1035 1091 3.007635 GGGAGTATGTTTGTGTGGTAGC 58.992 50.000 0.00 0.00 0.00 3.58
1213 1284 3.047877 GGCGTTGACGACCCCTTG 61.048 66.667 7.85 0.00 42.67 3.61
1322 1393 6.578020 CATGCAATGTATTTTGACATGGAC 57.422 37.500 0.00 0.00 39.99 4.02
1391 1474 7.534085 TCCGTGATTTACATTCATGAAGTAC 57.466 36.000 14.54 6.18 32.89 2.73
1392 1475 7.822334 AGTTCCGTGATTTACATTCATGAAGTA 59.178 33.333 14.54 12.65 32.89 2.24
1393 1476 6.655003 AGTTCCGTGATTTACATTCATGAAGT 59.345 34.615 14.54 13.57 32.89 3.01
1731 1820 4.773149 ACATATAGAGTAACCAGCTAGGCC 59.227 45.833 0.00 0.00 43.14 5.19
1867 4894 8.735692 ACATCACACACATCATATTCAACATA 57.264 30.769 0.00 0.00 0.00 2.29
1927 4954 5.867330 TGTCCGGAAATTACTTAGTTTCCA 58.133 37.500 5.23 0.00 46.43 3.53
1941 4969 3.505680 CAGGATTTCATGTTGTCCGGAAA 59.494 43.478 5.23 0.00 35.89 3.13
1989 5032 2.519302 ATGCATGTTAGGCGGGGC 60.519 61.111 0.00 0.00 0.00 5.80
1990 5033 2.195567 CCATGCATGTTAGGCGGGG 61.196 63.158 24.58 2.67 0.00 5.73
1995 5038 2.037641 TCGGATCTCCATGCATGTTAGG 59.962 50.000 24.58 10.13 35.14 2.69
1999 5042 0.832626 TGTCGGATCTCCATGCATGT 59.167 50.000 24.58 6.59 35.14 3.21
2000 5043 1.600957 GTTGTCGGATCTCCATGCATG 59.399 52.381 20.19 20.19 35.14 4.06
2004 5047 1.667724 GCTTGTTGTCGGATCTCCATG 59.332 52.381 0.00 0.00 35.14 3.66
2017 5060 3.902465 CGACTCGATTTTTCAGCTTGTTG 59.098 43.478 0.00 0.00 0.00 3.33
2019 5062 2.096218 GCGACTCGATTTTTCAGCTTGT 60.096 45.455 1.63 0.00 0.00 3.16
2020 5063 2.499896 GCGACTCGATTTTTCAGCTTG 58.500 47.619 1.63 0.00 0.00 4.01
2024 5067 0.727398 GGGGCGACTCGATTTTTCAG 59.273 55.000 1.63 0.00 0.00 3.02
2025 5068 0.675522 GGGGGCGACTCGATTTTTCA 60.676 55.000 1.63 0.00 0.00 2.69
2026 5069 1.702491 CGGGGGCGACTCGATTTTTC 61.702 60.000 1.63 0.00 0.00 2.29
2027 5070 1.743995 CGGGGGCGACTCGATTTTT 60.744 57.895 1.63 0.00 0.00 1.94
2028 5071 2.125269 CGGGGGCGACTCGATTTT 60.125 61.111 1.63 0.00 0.00 1.82
2029 5072 4.832608 GCGGGGGCGACTCGATTT 62.833 66.667 1.63 0.00 0.00 2.17
2034 5077 4.525949 GTTAGGCGGGGGCGACTC 62.526 72.222 0.00 0.00 0.00 3.36
2036 5079 4.171103 ATGTTAGGCGGGGGCGAC 62.171 66.667 0.00 0.00 0.00 5.19
2037 5080 4.169696 CATGTTAGGCGGGGGCGA 62.170 66.667 0.00 0.00 0.00 5.54
2039 5082 4.813235 TGCATGTTAGGCGGGGGC 62.813 66.667 0.00 0.00 0.00 5.80
2040 5083 2.195567 CATGCATGTTAGGCGGGGG 61.196 63.158 18.91 0.00 0.00 5.40
2041 5084 2.195567 CCATGCATGTTAGGCGGGG 61.196 63.158 24.58 2.67 0.00 5.73
2042 5085 1.447317 GACCATGCATGTTAGGCGGG 61.447 60.000 24.58 9.74 35.28 6.13
2043 5086 1.775039 CGACCATGCATGTTAGGCGG 61.775 60.000 24.58 10.48 0.00 6.13
2044 5087 1.643292 CGACCATGCATGTTAGGCG 59.357 57.895 24.58 19.07 0.00 5.52
2045 5088 0.463654 TCCGACCATGCATGTTAGGC 60.464 55.000 24.58 11.31 0.00 3.93
2049 5093 1.028330 CAGCTCCGACCATGCATGTT 61.028 55.000 24.58 11.76 0.00 2.71
2050 5094 1.450848 CAGCTCCGACCATGCATGT 60.451 57.895 24.58 13.09 0.00 3.21
2062 5106 2.743928 CCTGCGGACAACAGCTCC 60.744 66.667 0.00 0.00 38.02 4.70
2063 5107 2.743928 CCCTGCGGACAACAGCTC 60.744 66.667 0.00 0.00 38.02 4.09
2067 5111 3.636231 CTCCCCCTGCGGACAACA 61.636 66.667 0.00 0.00 0.00 3.33
2068 5112 4.410400 CCTCCCCCTGCGGACAAC 62.410 72.222 0.00 0.00 0.00 3.32
2069 5113 4.974438 ACCTCCCCCTGCGGACAA 62.974 66.667 0.00 0.00 0.00 3.18
2074 5118 3.465403 CTCTCACCTCCCCCTGCG 61.465 72.222 0.00 0.00 0.00 5.18
2075 5119 3.086600 CCTCTCACCTCCCCCTGC 61.087 72.222 0.00 0.00 0.00 4.85
2076 5120 2.366167 CCCTCTCACCTCCCCCTG 60.366 72.222 0.00 0.00 0.00 4.45
2077 5121 3.700350 CCCCTCTCACCTCCCCCT 61.700 72.222 0.00 0.00 0.00 4.79
2078 5122 4.825679 CCCCCTCTCACCTCCCCC 62.826 77.778 0.00 0.00 0.00 5.40
2080 5124 2.125225 AACCCCCTCTCACCTCCC 59.875 66.667 0.00 0.00 0.00 4.30
2081 5125 0.621862 ATCAACCCCCTCTCACCTCC 60.622 60.000 0.00 0.00 0.00 4.30
2082 5126 1.065126 CAATCAACCCCCTCTCACCTC 60.065 57.143 0.00 0.00 0.00 3.85
2084 5128 0.681243 GCAATCAACCCCCTCTCACC 60.681 60.000 0.00 0.00 0.00 4.02
2086 5130 1.075601 AAGCAATCAACCCCCTCTCA 58.924 50.000 0.00 0.00 0.00 3.27
2087 5131 2.222227 AAAGCAATCAACCCCCTCTC 57.778 50.000 0.00 0.00 0.00 3.20
2088 5132 2.250924 CAAAAGCAATCAACCCCCTCT 58.749 47.619 0.00 0.00 0.00 3.69
2089 5133 1.970640 ACAAAAGCAATCAACCCCCTC 59.029 47.619 0.00 0.00 0.00 4.30
2090 5134 2.101640 ACAAAAGCAATCAACCCCCT 57.898 45.000 0.00 0.00 0.00 4.79
2092 5136 6.052360 TCTAAAAACAAAAGCAATCAACCCC 58.948 36.000 0.00 0.00 0.00 4.95
2093 5137 7.657354 AGATCTAAAAACAAAAGCAATCAACCC 59.343 33.333 0.00 0.00 0.00 4.11
2094 5138 8.593492 AGATCTAAAAACAAAAGCAATCAACC 57.407 30.769 0.00 0.00 0.00 3.77
2097 5141 9.912634 CCTTAGATCTAAAAACAAAAGCAATCA 57.087 29.630 15.85 0.00 0.00 2.57
2098 5142 9.358872 CCCTTAGATCTAAAAACAAAAGCAATC 57.641 33.333 15.85 0.00 0.00 2.67
2099 5143 8.314021 CCCCTTAGATCTAAAAACAAAAGCAAT 58.686 33.333 15.85 0.00 0.00 3.56
2100 5144 7.256154 CCCCCTTAGATCTAAAAACAAAAGCAA 60.256 37.037 15.85 0.00 0.00 3.91
2101 5145 6.210584 CCCCCTTAGATCTAAAAACAAAAGCA 59.789 38.462 15.85 0.00 0.00 3.91
2102 5146 6.210784 ACCCCCTTAGATCTAAAAACAAAAGC 59.789 38.462 15.85 0.00 0.00 3.51
2103 5147 7.776618 ACCCCCTTAGATCTAAAAACAAAAG 57.223 36.000 15.85 3.91 0.00 2.27
2104 5148 8.555896 AAACCCCCTTAGATCTAAAAACAAAA 57.444 30.769 15.85 0.00 0.00 2.44
2105 5149 9.831682 ATAAACCCCCTTAGATCTAAAAACAAA 57.168 29.630 15.85 0.00 0.00 2.83
2106 5150 9.250246 CATAAACCCCCTTAGATCTAAAAACAA 57.750 33.333 15.85 0.00 0.00 2.83
2108 5152 8.818622 ACATAAACCCCCTTAGATCTAAAAAC 57.181 34.615 15.85 0.00 0.00 2.43
2113 5157 9.232882 ACATTTACATAAACCCCCTTAGATCTA 57.767 33.333 0.00 0.00 0.00 1.98
2114 5158 8.114301 ACATTTACATAAACCCCCTTAGATCT 57.886 34.615 0.00 0.00 0.00 2.75
2115 5159 8.762481 AACATTTACATAAACCCCCTTAGATC 57.238 34.615 0.00 0.00 0.00 2.75
2117 5161 8.808092 CAAAACATTTACATAAACCCCCTTAGA 58.192 33.333 0.00 0.00 0.00 2.10
2118 5162 7.547722 GCAAAACATTTACATAAACCCCCTTAG 59.452 37.037 0.00 0.00 0.00 2.18
2119 5163 7.387643 GCAAAACATTTACATAAACCCCCTTA 58.612 34.615 0.00 0.00 0.00 2.69
2120 5164 6.234920 GCAAAACATTTACATAAACCCCCTT 58.765 36.000 0.00 0.00 0.00 3.95
2121 5165 5.280266 GGCAAAACATTTACATAAACCCCCT 60.280 40.000 0.00 0.00 0.00 4.79
2122 5166 4.938832 GGCAAAACATTTACATAAACCCCC 59.061 41.667 0.00 0.00 0.00 5.40
2123 5167 5.552178 TGGCAAAACATTTACATAAACCCC 58.448 37.500 0.00 0.00 0.00 4.95
2124 5168 6.708502 ACTTGGCAAAACATTTACATAAACCC 59.291 34.615 0.00 0.00 0.00 4.11
2125 5169 7.439655 TGACTTGGCAAAACATTTACATAAACC 59.560 33.333 0.00 0.00 0.00 3.27
2126 5170 8.359060 TGACTTGGCAAAACATTTACATAAAC 57.641 30.769 0.00 0.00 0.00 2.01
2127 5171 7.170658 GCTGACTTGGCAAAACATTTACATAAA 59.829 33.333 0.00 0.00 0.00 1.40
2128 5172 6.644592 GCTGACTTGGCAAAACATTTACATAA 59.355 34.615 0.00 0.00 0.00 1.90
2129 5173 6.015519 AGCTGACTTGGCAAAACATTTACATA 60.016 34.615 0.00 0.00 0.00 2.29
2130 5174 4.990426 GCTGACTTGGCAAAACATTTACAT 59.010 37.500 0.00 0.00 0.00 2.29
2131 5175 4.099266 AGCTGACTTGGCAAAACATTTACA 59.901 37.500 0.00 0.00 0.00 2.41
2132 5176 4.620982 AGCTGACTTGGCAAAACATTTAC 58.379 39.130 0.00 0.00 0.00 2.01
2133 5177 4.261994 GGAGCTGACTTGGCAAAACATTTA 60.262 41.667 0.00 0.00 0.00 1.40
2134 5178 3.493176 GGAGCTGACTTGGCAAAACATTT 60.493 43.478 0.00 0.00 0.00 2.32
2135 5179 2.036346 GGAGCTGACTTGGCAAAACATT 59.964 45.455 0.00 0.00 0.00 2.71
2136 5180 1.615392 GGAGCTGACTTGGCAAAACAT 59.385 47.619 0.00 0.00 0.00 2.71
2137 5181 1.032014 GGAGCTGACTTGGCAAAACA 58.968 50.000 0.00 3.68 0.00 2.83
2138 5182 0.315251 GGGAGCTGACTTGGCAAAAC 59.685 55.000 0.00 0.00 0.00 2.43
2139 5183 1.172180 CGGGAGCTGACTTGGCAAAA 61.172 55.000 0.00 0.00 0.00 2.44
2140 5184 1.600636 CGGGAGCTGACTTGGCAAA 60.601 57.895 0.00 0.00 0.00 3.68
2141 5185 2.032528 CGGGAGCTGACTTGGCAA 59.967 61.111 0.00 0.00 0.00 4.52
2142 5186 2.922503 TCGGGAGCTGACTTGGCA 60.923 61.111 0.00 0.00 0.00 4.92
2143 5187 2.435059 GTCGGGAGCTGACTTGGC 60.435 66.667 0.00 0.00 36.86 4.52
2144 5188 0.036010 ATTGTCGGGAGCTGACTTGG 60.036 55.000 0.00 0.00 40.15 3.61
2145 5189 1.363744 GATTGTCGGGAGCTGACTTG 58.636 55.000 0.00 0.00 40.15 3.16
2146 5190 0.250513 GGATTGTCGGGAGCTGACTT 59.749 55.000 0.00 0.00 40.15 3.01
2147 5191 1.901085 GGATTGTCGGGAGCTGACT 59.099 57.895 0.00 0.00 40.15 3.41
2148 5192 1.519455 CGGATTGTCGGGAGCTGAC 60.519 63.158 0.00 0.00 39.93 3.51
2149 5193 2.721167 CCGGATTGTCGGGAGCTGA 61.721 63.158 0.00 0.00 45.78 4.26
2150 5194 2.202932 CCGGATTGTCGGGAGCTG 60.203 66.667 0.00 0.00 45.78 4.24
2157 5201 3.622060 AAGTGGGGCCGGATTGTCG 62.622 63.158 5.05 0.00 0.00 4.35
2158 5202 2.046285 CAAGTGGGGCCGGATTGTC 61.046 63.158 5.05 0.00 0.00 3.18
2159 5203 2.035626 CAAGTGGGGCCGGATTGT 59.964 61.111 5.05 0.00 0.00 2.71
2160 5204 2.035626 ACAAGTGGGGCCGGATTG 59.964 61.111 5.05 10.57 0.00 2.67
2161 5205 2.355115 GACAAGTGGGGCCGGATT 59.645 61.111 5.05 0.00 0.00 3.01
2162 5206 2.933287 TGACAAGTGGGGCCGGAT 60.933 61.111 5.05 0.00 0.00 4.18
2163 5207 3.636231 CTGACAAGTGGGGCCGGA 61.636 66.667 5.05 0.00 0.00 5.14
2164 5208 2.690653 TTTCTGACAAGTGGGGCCGG 62.691 60.000 0.00 0.00 0.00 6.13
2165 5209 0.821711 TTTTCTGACAAGTGGGGCCG 60.822 55.000 0.00 0.00 0.00 6.13
2166 5210 1.273327 CATTTTCTGACAAGTGGGGCC 59.727 52.381 0.00 0.00 0.00 5.80
2167 5211 2.238521 TCATTTTCTGACAAGTGGGGC 58.761 47.619 0.00 0.00 0.00 5.80
2168 5212 6.588719 TTAATCATTTTCTGACAAGTGGGG 57.411 37.500 0.00 0.00 36.48 4.96
2169 5213 6.582295 CGTTTAATCATTTTCTGACAAGTGGG 59.418 38.462 0.00 0.00 36.48 4.61
2170 5214 7.323656 GTCGTTTAATCATTTTCTGACAAGTGG 59.676 37.037 0.00 0.00 36.48 4.00
2171 5215 7.323656 GGTCGTTTAATCATTTTCTGACAAGTG 59.676 37.037 0.00 0.00 36.48 3.16
2172 5216 7.228706 AGGTCGTTTAATCATTTTCTGACAAGT 59.771 33.333 0.00 0.00 36.48 3.16
2173 5217 7.584987 AGGTCGTTTAATCATTTTCTGACAAG 58.415 34.615 0.00 0.00 36.48 3.16
2174 5218 7.504924 AGGTCGTTTAATCATTTTCTGACAA 57.495 32.000 0.00 0.00 36.48 3.18
2175 5219 8.610248 TTAGGTCGTTTAATCATTTTCTGACA 57.390 30.769 0.00 0.00 36.48 3.58
2182 5226 9.840427 CAAGTGATTTAGGTCGTTTAATCATTT 57.160 29.630 0.00 0.00 38.73 2.32
2183 5227 9.226606 TCAAGTGATTTAGGTCGTTTAATCATT 57.773 29.630 0.00 0.00 38.73 2.57
2184 5228 8.786826 TCAAGTGATTTAGGTCGTTTAATCAT 57.213 30.769 0.00 0.00 38.73 2.45
2185 5229 8.786826 ATCAAGTGATTTAGGTCGTTTAATCA 57.213 30.769 0.00 0.00 35.33 2.57
2190 5234 7.968405 GCATTAATCAAGTGATTTAGGTCGTTT 59.032 33.333 11.58 0.00 41.64 3.60
2191 5235 7.336931 AGCATTAATCAAGTGATTTAGGTCGTT 59.663 33.333 11.58 0.00 41.64 3.85
2192 5236 6.823689 AGCATTAATCAAGTGATTTAGGTCGT 59.176 34.615 11.58 0.00 41.64 4.34
2193 5237 7.251704 AGCATTAATCAAGTGATTTAGGTCG 57.748 36.000 11.58 0.00 41.64 4.79
2194 5238 9.860898 AAAAGCATTAATCAAGTGATTTAGGTC 57.139 29.630 11.58 2.57 41.64 3.85
2218 5262 8.587950 CGCACATTCAGTAAACTTTTTGTAAAA 58.412 29.630 0.00 0.00 0.00 1.52
2219 5263 7.221067 CCGCACATTCAGTAAACTTTTTGTAAA 59.779 33.333 0.00 0.00 0.00 2.01
2220 5264 6.693545 CCGCACATTCAGTAAACTTTTTGTAA 59.306 34.615 0.00 0.00 0.00 2.41
2221 5265 6.183360 ACCGCACATTCAGTAAACTTTTTGTA 60.183 34.615 0.00 0.00 0.00 2.41
2222 5266 5.040635 CCGCACATTCAGTAAACTTTTTGT 58.959 37.500 0.00 0.00 0.00 2.83
2223 5267 5.040635 ACCGCACATTCAGTAAACTTTTTG 58.959 37.500 0.00 0.00 0.00 2.44
2224 5268 5.040635 CACCGCACATTCAGTAAACTTTTT 58.959 37.500 0.00 0.00 0.00 1.94
2225 5269 4.097286 ACACCGCACATTCAGTAAACTTTT 59.903 37.500 0.00 0.00 0.00 2.27
2226 5270 3.630312 ACACCGCACATTCAGTAAACTTT 59.370 39.130 0.00 0.00 0.00 2.66
2227 5271 3.211045 ACACCGCACATTCAGTAAACTT 58.789 40.909 0.00 0.00 0.00 2.66
2228 5272 2.846193 ACACCGCACATTCAGTAAACT 58.154 42.857 0.00 0.00 0.00 2.66
2229 5273 3.250040 AGAACACCGCACATTCAGTAAAC 59.750 43.478 0.00 0.00 0.00 2.01
2230 5274 3.472652 AGAACACCGCACATTCAGTAAA 58.527 40.909 0.00 0.00 0.00 2.01
2231 5275 3.120321 AGAACACCGCACATTCAGTAA 57.880 42.857 0.00 0.00 0.00 2.24
2232 5276 2.831685 AGAACACCGCACATTCAGTA 57.168 45.000 0.00 0.00 0.00 2.74
2233 5277 1.967319 AAGAACACCGCACATTCAGT 58.033 45.000 0.00 0.00 0.00 3.41
2234 5278 2.653890 CAAAGAACACCGCACATTCAG 58.346 47.619 0.00 0.00 0.00 3.02
2235 5279 1.268999 GCAAAGAACACCGCACATTCA 60.269 47.619 0.00 0.00 0.00 2.57
2236 5280 1.268999 TGCAAAGAACACCGCACATTC 60.269 47.619 0.00 0.00 0.00 2.67
2237 5281 0.743688 TGCAAAGAACACCGCACATT 59.256 45.000 0.00 0.00 0.00 2.71
2238 5282 0.743688 TTGCAAAGAACACCGCACAT 59.256 45.000 0.00 0.00 33.29 3.21
2239 5283 0.528017 TTTGCAAAGAACACCGCACA 59.472 45.000 8.05 0.00 33.29 4.57
2240 5284 1.634702 TTTTGCAAAGAACACCGCAC 58.365 45.000 12.41 0.00 33.29 5.34
2241 5285 2.370281 TTTTTGCAAAGAACACCGCA 57.630 40.000 12.41 0.00 0.00 5.69
2257 5301 9.594478 CAGAAAACCAACAGGTTACTAATTTTT 57.406 29.630 0.00 0.00 44.72 1.94
2258 5302 7.709182 GCAGAAAACCAACAGGTTACTAATTTT 59.291 33.333 0.00 0.00 44.72 1.82
2259 5303 7.147811 TGCAGAAAACCAACAGGTTACTAATTT 60.148 33.333 0.00 0.00 44.72 1.82
2260 5304 6.322712 TGCAGAAAACCAACAGGTTACTAATT 59.677 34.615 0.00 0.00 44.72 1.40
2261 5305 5.830991 TGCAGAAAACCAACAGGTTACTAAT 59.169 36.000 0.00 0.00 44.72 1.73
2262 5306 5.194432 TGCAGAAAACCAACAGGTTACTAA 58.806 37.500 0.00 0.00 44.72 2.24
2263 5307 4.783055 TGCAGAAAACCAACAGGTTACTA 58.217 39.130 0.00 0.00 44.72 1.82
2264 5308 3.626930 TGCAGAAAACCAACAGGTTACT 58.373 40.909 0.00 1.45 44.72 2.24
2265 5309 4.379339 TTGCAGAAAACCAACAGGTTAC 57.621 40.909 0.00 0.00 44.72 2.50
2266 5310 4.675671 CGTTTGCAGAAAACCAACAGGTTA 60.676 41.667 0.00 0.00 44.72 2.85
2268 5312 2.416701 CGTTTGCAGAAAACCAACAGGT 60.417 45.455 0.00 0.00 44.55 4.00
2269 5313 2.159310 TCGTTTGCAGAAAACCAACAGG 60.159 45.455 0.00 0.00 44.55 4.00
2270 5314 3.143807 TCGTTTGCAGAAAACCAACAG 57.856 42.857 0.00 0.00 44.55 3.16
2271 5315 3.443037 CATCGTTTGCAGAAAACCAACA 58.557 40.909 0.00 0.00 44.55 3.33
2283 5327 4.902552 CCACATTGGAGGCATCGTTTGC 62.903 54.545 4.80 4.80 45.46 3.68
2287 5331 0.677731 CACCACATTGGAGGCATCGT 60.678 55.000 0.00 0.00 40.96 3.73
2288 5332 1.378882 CCACCACATTGGAGGCATCG 61.379 60.000 0.00 0.00 41.28 3.84
2297 5341 2.306341 TGCACAAAACCACCACATTG 57.694 45.000 0.00 0.00 0.00 2.82
2303 5347 3.733727 CGAGTTAATTGCACAAAACCACC 59.266 43.478 0.00 0.00 0.00 4.61
2304 5348 3.733727 CCGAGTTAATTGCACAAAACCAC 59.266 43.478 0.00 0.00 0.00 4.16
2309 5497 3.797184 GCCAACCGAGTTAATTGCACAAA 60.797 43.478 0.00 0.00 0.00 2.83
2310 5498 2.287909 GCCAACCGAGTTAATTGCACAA 60.288 45.455 0.00 0.00 0.00 3.33
2325 5513 2.040544 CCAGACATGACGGCCAACC 61.041 63.158 2.24 0.00 0.00 3.77
2327 5515 0.687920 TAACCAGACATGACGGCCAA 59.312 50.000 2.24 0.00 0.00 4.52
2330 5518 1.090052 GCCTAACCAGACATGACGGC 61.090 60.000 0.00 0.00 0.00 5.68
2331 5519 0.462047 GGCCTAACCAGACATGACGG 60.462 60.000 0.00 1.98 38.86 4.79
2332 5520 0.249120 TGGCCTAACCAGACATGACG 59.751 55.000 3.32 0.00 46.36 4.35
2344 5532 0.912487 AGATCACCGGGTTGGCCTAA 60.912 55.000 6.32 0.00 43.94 2.69
2346 5534 1.789576 AAAGATCACCGGGTTGGCCT 61.790 55.000 6.32 0.00 43.94 5.19
2347 5535 0.898326 AAAAGATCACCGGGTTGGCC 60.898 55.000 6.32 0.00 43.94 5.36
2348 5536 0.243636 CAAAAGATCACCGGGTTGGC 59.756 55.000 6.32 0.00 43.94 4.52
2349 5537 1.539827 GACAAAAGATCACCGGGTTGG 59.460 52.381 6.32 0.00 46.41 3.77
2350 5538 1.539827 GGACAAAAGATCACCGGGTTG 59.460 52.381 6.32 0.00 0.00 3.77
2351 5539 1.880646 CGGACAAAAGATCACCGGGTT 60.881 52.381 6.32 0.00 39.92 4.11
2352 5540 0.321298 CGGACAAAAGATCACCGGGT 60.321 55.000 6.32 0.00 39.92 5.28
2353 5541 0.321298 ACGGACAAAAGATCACCGGG 60.321 55.000 6.32 0.00 46.45 5.73
2354 5542 1.076332 GACGGACAAAAGATCACCGG 58.924 55.000 0.00 0.00 46.45 5.28
2356 5544 2.076863 CAGGACGGACAAAAGATCACC 58.923 52.381 0.00 0.00 0.00 4.02
2357 5545 2.767505 ACAGGACGGACAAAAGATCAC 58.232 47.619 0.00 0.00 0.00 3.06
2358 5546 4.610605 TTACAGGACGGACAAAAGATCA 57.389 40.909 0.00 0.00 0.00 2.92
2359 5547 4.143179 CGTTTACAGGACGGACAAAAGATC 60.143 45.833 0.00 0.00 36.90 2.75
2360 5548 3.744426 CGTTTACAGGACGGACAAAAGAT 59.256 43.478 0.00 0.00 36.90 2.40
2361 5549 3.125316 CGTTTACAGGACGGACAAAAGA 58.875 45.455 0.00 0.00 36.90 2.52
2362 5550 2.867975 ACGTTTACAGGACGGACAAAAG 59.132 45.455 1.64 0.00 44.34 2.27
2363 5551 2.903798 ACGTTTACAGGACGGACAAAA 58.096 42.857 1.64 0.00 44.34 2.44
2364 5552 2.600470 ACGTTTACAGGACGGACAAA 57.400 45.000 1.64 0.00 44.34 2.83
2365 5553 2.203401 CAACGTTTACAGGACGGACAA 58.797 47.619 0.00 0.00 44.34 3.18
2366 5554 1.136695 ACAACGTTTACAGGACGGACA 59.863 47.619 0.00 0.00 44.34 4.02
2367 5555 1.523934 CACAACGTTTACAGGACGGAC 59.476 52.381 0.00 0.00 44.34 4.79
2368 5556 1.408340 TCACAACGTTTACAGGACGGA 59.592 47.619 0.00 0.00 44.34 4.69
2369 5557 1.855513 TCACAACGTTTACAGGACGG 58.144 50.000 0.00 0.00 44.34 4.79
2370 5558 3.054166 TCATCACAACGTTTACAGGACG 58.946 45.455 0.00 0.00 45.46 4.79
2371 5559 5.178623 TGAATCATCACAACGTTTACAGGAC 59.821 40.000 0.00 0.00 0.00 3.85
2372 5560 5.301555 TGAATCATCACAACGTTTACAGGA 58.698 37.500 0.00 0.00 0.00 3.86
2373 5561 5.605564 TGAATCATCACAACGTTTACAGG 57.394 39.130 0.00 0.00 0.00 4.00
2374 5562 9.605955 TTTATTGAATCATCACAACGTTTACAG 57.394 29.630 0.00 0.00 34.61 2.74
2375 5563 9.605955 CTTTATTGAATCATCACAACGTTTACA 57.394 29.630 0.00 0.00 34.61 2.41
2376 5564 8.575454 GCTTTATTGAATCATCACAACGTTTAC 58.425 33.333 0.00 0.00 34.61 2.01
2377 5565 8.511321 AGCTTTATTGAATCATCACAACGTTTA 58.489 29.630 0.00 0.00 34.61 2.01
2378 5566 7.370383 AGCTTTATTGAATCATCACAACGTTT 58.630 30.769 0.00 0.00 34.61 3.60
2379 5567 6.913170 AGCTTTATTGAATCATCACAACGTT 58.087 32.000 0.00 0.00 34.61 3.99
2380 5568 6.500684 AGCTTTATTGAATCATCACAACGT 57.499 33.333 0.00 0.00 34.61 3.99
2381 5569 6.193410 CGAAGCTTTATTGAATCATCACAACG 59.807 38.462 0.00 0.00 34.61 4.10
2382 5570 7.428562 CGAAGCTTTATTGAATCATCACAAC 57.571 36.000 0.00 0.00 34.61 3.32
2402 5590 3.740044 TTTTTAGGCAATCTCGCGAAG 57.260 42.857 11.33 4.62 0.00 3.79
2419 5607 0.547471 CCCCTCCCCCAAGCATTTTT 60.547 55.000 0.00 0.00 0.00 1.94
2420 5608 1.080907 CCCCTCCCCCAAGCATTTT 59.919 57.895 0.00 0.00 0.00 1.82
2421 5609 2.779981 CCCCTCCCCCAAGCATTT 59.220 61.111 0.00 0.00 0.00 2.32
2422 5610 3.358824 CCCCCTCCCCCAAGCATT 61.359 66.667 0.00 0.00 0.00 3.56
2436 5624 0.470341 GAGCATCAAGTAGGACCCCC 59.530 60.000 0.00 0.00 33.17 5.40
2437 5625 1.204146 TGAGCATCAAGTAGGACCCC 58.796 55.000 0.00 0.00 45.97 4.95
2462 5650 9.935241 CCTATCACTGTAGATGCACTTATTTAT 57.065 33.333 0.00 0.00 0.00 1.40
2463 5651 7.872993 GCCTATCACTGTAGATGCACTTATTTA 59.127 37.037 0.00 0.00 0.00 1.40
2464 5652 6.708054 GCCTATCACTGTAGATGCACTTATTT 59.292 38.462 0.00 0.00 0.00 1.40
2465 5653 6.183361 TGCCTATCACTGTAGATGCACTTATT 60.183 38.462 0.00 0.00 0.00 1.40
2466 5654 5.305386 TGCCTATCACTGTAGATGCACTTAT 59.695 40.000 0.00 0.00 0.00 1.73
2467 5655 4.649218 TGCCTATCACTGTAGATGCACTTA 59.351 41.667 0.00 0.00 0.00 2.24
2468 5656 3.452264 TGCCTATCACTGTAGATGCACTT 59.548 43.478 0.00 0.00 0.00 3.16
2469 5657 3.033909 TGCCTATCACTGTAGATGCACT 58.966 45.455 0.00 0.00 0.00 4.40
2470 5658 3.459232 TGCCTATCACTGTAGATGCAC 57.541 47.619 0.00 0.00 0.00 4.57
2471 5659 3.432186 GGTTGCCTATCACTGTAGATGCA 60.432 47.826 0.00 0.00 0.00 3.96
2472 5660 3.134458 GGTTGCCTATCACTGTAGATGC 58.866 50.000 0.00 0.00 0.00 3.91
2473 5661 4.679373 AGGTTGCCTATCACTGTAGATG 57.321 45.455 0.00 0.00 28.47 2.90
2474 5662 5.700402 AAAGGTTGCCTATCACTGTAGAT 57.300 39.130 0.00 0.00 31.13 1.98
2475 5663 5.248477 AGAAAAGGTTGCCTATCACTGTAGA 59.752 40.000 0.00 0.00 31.13 2.59
2476 5664 5.491982 AGAAAAGGTTGCCTATCACTGTAG 58.508 41.667 0.00 0.00 31.13 2.74
2477 5665 5.499004 AGAAAAGGTTGCCTATCACTGTA 57.501 39.130 0.00 0.00 31.13 2.74
2478 5666 4.373156 AGAAAAGGTTGCCTATCACTGT 57.627 40.909 0.00 0.00 31.13 3.55
2479 5667 5.123979 GGTAAGAAAAGGTTGCCTATCACTG 59.876 44.000 0.00 0.00 31.13 3.66
2480 5668 5.014228 AGGTAAGAAAAGGTTGCCTATCACT 59.986 40.000 0.00 0.00 38.15 3.41
2481 5669 5.254115 AGGTAAGAAAAGGTTGCCTATCAC 58.746 41.667 0.00 0.00 38.15 3.06
2482 5670 5.514500 AGGTAAGAAAAGGTTGCCTATCA 57.486 39.130 0.00 0.00 38.15 2.15
2483 5671 8.521170 AAATAGGTAAGAAAAGGTTGCCTATC 57.479 34.615 11.43 0.00 46.43 2.08
2485 5673 7.392393 GTGAAATAGGTAAGAAAAGGTTGCCTA 59.608 37.037 2.69 2.69 43.71 3.93
2486 5674 6.208797 GTGAAATAGGTAAGAAAAGGTTGCCT 59.791 38.462 0.00 0.00 42.14 4.75
2487 5675 6.015772 TGTGAAATAGGTAAGAAAAGGTTGCC 60.016 38.462 0.00 0.00 0.00 4.52
2488 5676 6.977213 TGTGAAATAGGTAAGAAAAGGTTGC 58.023 36.000 0.00 0.00 0.00 4.17
2489 5677 8.792633 TGATGTGAAATAGGTAAGAAAAGGTTG 58.207 33.333 0.00 0.00 0.00 3.77
2490 5678 8.934023 TGATGTGAAATAGGTAAGAAAAGGTT 57.066 30.769 0.00 0.00 0.00 3.50
2528 5716 9.444600 AATCCGTTCTACTATAACATGTTTTGT 57.555 29.630 17.78 14.69 41.53 2.83
2568 5756 9.920946 TGCCTCTTAAAATTTAATGGTAGAGAT 57.079 29.630 11.09 0.00 31.76 2.75
2569 5757 9.174166 GTGCCTCTTAAAATTTAATGGTAGAGA 57.826 33.333 11.09 0.00 31.76 3.10
2570 5758 9.178758 AGTGCCTCTTAAAATTTAATGGTAGAG 57.821 33.333 14.51 10.16 0.00 2.43
2582 5770 9.267071 ACCCAATAATTTAGTGCCTCTTAAAAT 57.733 29.630 0.00 0.00 0.00 1.82
2583 5771 8.527810 CACCCAATAATTTAGTGCCTCTTAAAA 58.472 33.333 0.00 0.00 0.00 1.52
2584 5772 7.891183 TCACCCAATAATTTAGTGCCTCTTAAA 59.109 33.333 0.00 0.00 0.00 1.52
2585 5773 7.406916 TCACCCAATAATTTAGTGCCTCTTAA 58.593 34.615 0.00 0.00 0.00 1.85
2586 5774 6.964464 TCACCCAATAATTTAGTGCCTCTTA 58.036 36.000 0.00 0.00 0.00 2.10
2587 5775 5.826643 TCACCCAATAATTTAGTGCCTCTT 58.173 37.500 0.00 0.00 0.00 2.85
2588 5776 5.450818 TCACCCAATAATTTAGTGCCTCT 57.549 39.130 0.00 0.00 0.00 3.69
2589 5777 7.817418 TTATCACCCAATAATTTAGTGCCTC 57.183 36.000 0.00 0.00 0.00 4.70
2590 5778 8.602472 TTTTATCACCCAATAATTTAGTGCCT 57.398 30.769 0.00 0.00 0.00 4.75
2591 5779 7.926018 CCTTTTATCACCCAATAATTTAGTGCC 59.074 37.037 0.00 0.00 0.00 5.01
2592 5780 7.438160 GCCTTTTATCACCCAATAATTTAGTGC 59.562 37.037 0.00 0.00 0.00 4.40
2593 5781 8.474025 TGCCTTTTATCACCCAATAATTTAGTG 58.526 33.333 0.00 0.00 0.00 2.74
2594 5782 8.602472 TGCCTTTTATCACCCAATAATTTAGT 57.398 30.769 0.00 0.00 0.00 2.24
2595 5783 9.696917 GATGCCTTTTATCACCCAATAATTTAG 57.303 33.333 0.00 0.00 0.00 1.85
2596 5784 9.432982 AGATGCCTTTTATCACCCAATAATTTA 57.567 29.630 0.00 0.00 0.00 1.40
2597 5785 8.322905 AGATGCCTTTTATCACCCAATAATTT 57.677 30.769 0.00 0.00 0.00 1.82
2598 5786 7.255590 CGAGATGCCTTTTATCACCCAATAATT 60.256 37.037 0.00 0.00 0.00 1.40
2599 5787 6.207417 CGAGATGCCTTTTATCACCCAATAAT 59.793 38.462 0.00 0.00 0.00 1.28
2600 5788 5.530915 CGAGATGCCTTTTATCACCCAATAA 59.469 40.000 0.00 0.00 0.00 1.40
2601 5789 5.063204 CGAGATGCCTTTTATCACCCAATA 58.937 41.667 0.00 0.00 0.00 1.90
2602 5790 3.885297 CGAGATGCCTTTTATCACCCAAT 59.115 43.478 0.00 0.00 0.00 3.16
2603 5791 3.278574 CGAGATGCCTTTTATCACCCAA 58.721 45.455 0.00 0.00 0.00 4.12
2604 5792 2.238646 ACGAGATGCCTTTTATCACCCA 59.761 45.455 0.00 0.00 0.00 4.51
2605 5793 2.919228 ACGAGATGCCTTTTATCACCC 58.081 47.619 0.00 0.00 0.00 4.61
2606 5794 3.489785 CGTACGAGATGCCTTTTATCACC 59.510 47.826 10.44 0.00 0.00 4.02
2607 5795 4.357142 TCGTACGAGATGCCTTTTATCAC 58.643 43.478 15.28 0.00 0.00 3.06
2608 5796 4.642445 TCGTACGAGATGCCTTTTATCA 57.358 40.909 15.28 0.00 0.00 2.15
2609 5797 6.200286 TCAATTCGTACGAGATGCCTTTTATC 59.800 38.462 18.64 0.00 0.00 1.75
2610 5798 6.046593 TCAATTCGTACGAGATGCCTTTTAT 58.953 36.000 18.64 1.94 0.00 1.40
2611 5799 5.412640 TCAATTCGTACGAGATGCCTTTTA 58.587 37.500 18.64 0.00 0.00 1.52
2612 5800 4.250464 TCAATTCGTACGAGATGCCTTTT 58.750 39.130 18.64 1.33 0.00 2.27
2613 5801 3.857052 TCAATTCGTACGAGATGCCTTT 58.143 40.909 18.64 2.63 0.00 3.11
2614 5802 3.520290 TCAATTCGTACGAGATGCCTT 57.480 42.857 18.64 4.11 0.00 4.35
2615 5803 3.520290 TTCAATTCGTACGAGATGCCT 57.480 42.857 18.64 0.00 0.00 4.75
2616 5804 4.593597 TTTTCAATTCGTACGAGATGCC 57.406 40.909 18.64 0.00 0.00 4.40
2617 5805 6.021596 ACATTTTTCAATTCGTACGAGATGC 58.978 36.000 18.64 0.00 0.00 3.91
2618 5806 8.434870 AAACATTTTTCAATTCGTACGAGATG 57.565 30.769 18.64 19.57 0.00 2.90
2651 5839 9.443283 CGAGCAAATAGATGATTCCTTAAAAAG 57.557 33.333 0.00 0.00 0.00 2.27
2652 5840 9.173021 TCGAGCAAATAGATGATTCCTTAAAAA 57.827 29.630 0.00 0.00 0.00 1.94
2653 5841 8.731275 TCGAGCAAATAGATGATTCCTTAAAA 57.269 30.769 0.00 0.00 0.00 1.52
2654 5842 8.204160 TCTCGAGCAAATAGATGATTCCTTAAA 58.796 33.333 7.81 0.00 0.00 1.52
2655 5843 7.726216 TCTCGAGCAAATAGATGATTCCTTAA 58.274 34.615 7.81 0.00 0.00 1.85
2656 5844 7.290110 TCTCGAGCAAATAGATGATTCCTTA 57.710 36.000 7.81 0.00 0.00 2.69
2657 5845 6.166984 TCTCGAGCAAATAGATGATTCCTT 57.833 37.500 7.81 0.00 0.00 3.36
2658 5846 5.798125 TCTCGAGCAAATAGATGATTCCT 57.202 39.130 7.81 0.00 0.00 3.36
2659 5847 5.407995 CCTTCTCGAGCAAATAGATGATTCC 59.592 44.000 7.81 0.00 0.00 3.01
2660 5848 5.107143 GCCTTCTCGAGCAAATAGATGATTC 60.107 44.000 7.81 0.00 0.00 2.52
2661 5849 4.754114 GCCTTCTCGAGCAAATAGATGATT 59.246 41.667 7.81 0.00 0.00 2.57
2662 5850 4.202295 TGCCTTCTCGAGCAAATAGATGAT 60.202 41.667 7.81 0.00 35.69 2.45
2663 5851 3.132824 TGCCTTCTCGAGCAAATAGATGA 59.867 43.478 7.81 0.00 35.69 2.92
2664 5852 3.461061 TGCCTTCTCGAGCAAATAGATG 58.539 45.455 7.81 0.00 35.69 2.90
2665 5853 3.827008 TGCCTTCTCGAGCAAATAGAT 57.173 42.857 7.81 0.00 35.69 1.98
2666 5854 3.610040 TTGCCTTCTCGAGCAAATAGA 57.390 42.857 7.81 0.00 45.51 1.98
2671 5859 1.003355 CCCTTGCCTTCTCGAGCAA 60.003 57.895 7.81 8.63 46.26 3.91
2672 5860 0.902984 TACCCTTGCCTTCTCGAGCA 60.903 55.000 7.81 0.00 37.18 4.26
2673 5861 0.466124 ATACCCTTGCCTTCTCGAGC 59.534 55.000 7.81 0.00 0.00 5.03
2674 5862 1.482593 ACATACCCTTGCCTTCTCGAG 59.517 52.381 5.93 5.93 0.00 4.04
2675 5863 1.568504 ACATACCCTTGCCTTCTCGA 58.431 50.000 0.00 0.00 0.00 4.04
2676 5864 2.093447 AGAACATACCCTTGCCTTCTCG 60.093 50.000 0.00 0.00 0.00 4.04
2677 5865 3.636153 AGAACATACCCTTGCCTTCTC 57.364 47.619 0.00 0.00 0.00 2.87
2678 5866 3.330701 TGAAGAACATACCCTTGCCTTCT 59.669 43.478 0.00 0.00 33.93 2.85
2679 5867 3.686016 TGAAGAACATACCCTTGCCTTC 58.314 45.455 0.00 0.00 33.65 3.46
2680 5868 3.806949 TGAAGAACATACCCTTGCCTT 57.193 42.857 0.00 0.00 0.00 4.35
2681 5869 4.322057 AATGAAGAACATACCCTTGCCT 57.678 40.909 0.00 0.00 38.38 4.75
2682 5870 5.405935 AAAATGAAGAACATACCCTTGCC 57.594 39.130 0.00 0.00 38.38 4.52
2683 5871 6.454795 TGAAAAATGAAGAACATACCCTTGC 58.545 36.000 0.00 0.00 38.38 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.