Multiple sequence alignment - TraesCS2A01G040100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G040100 chr2A 100.000 4310 0 0 1 4310 16549300 16553609 0.000000e+00 7960.0
1 TraesCS2A01G040100 chr2A 97.727 88 2 0 3634 3721 81757314 81757227 7.460000e-33 152.0
2 TraesCS2A01G040100 chr2A 94.048 84 3 2 4038 4120 16553279 16553361 4.520000e-25 126.0
3 TraesCS2A01G040100 chr2A 94.048 84 3 2 3980 4062 16553337 16553419 4.520000e-25 126.0
4 TraesCS2A01G040100 chr2D 86.823 2254 159 59 20 2211 14252214 14254391 0.000000e+00 2390.0
5 TraesCS2A01G040100 chr2D 94.051 1412 62 5 2235 3638 14254445 14255842 0.000000e+00 2122.0
6 TraesCS2A01G040100 chr2D 98.592 284 3 1 3718 4001 14255842 14256124 6.430000e-138 501.0
7 TraesCS2A01G040100 chr2B 86.578 1885 137 38 27 1862 26098012 26099829 0.000000e+00 1973.0
8 TraesCS2A01G040100 chr2B 93.029 746 40 6 2904 3638 26100991 26101735 0.000000e+00 1079.0
9 TraesCS2A01G040100 chr2B 93.056 720 35 7 2201 2907 26100240 26100957 0.000000e+00 1038.0
10 TraesCS2A01G040100 chr2B 90.826 327 20 6 1899 2217 26099898 26100222 3.080000e-116 429.0
11 TraesCS2A01G040100 chr2B 93.000 100 5 2 3626 3724 435504860 435504958 1.250000e-30 145.0
12 TraesCS2A01G040100 chr2B 97.959 49 1 0 3745 3793 26101920 26101968 7.680000e-13 86.1
13 TraesCS2A01G040100 chr2B 100.000 29 0 0 4106 4134 26102131 26102159 2.000000e-03 54.7
14 TraesCS2A01G040100 chr3A 97.006 167 3 2 3293 3459 692356820 692356984 3.280000e-71 279.0
15 TraesCS2A01G040100 chr3A 96.875 64 2 0 3018 3081 692343856 692343919 1.640000e-19 108.0
16 TraesCS2A01G040100 chr1A 97.753 89 2 0 3633 3721 561611239 561611327 2.080000e-33 154.0
17 TraesCS2A01G040100 chr1A 94.845 97 3 2 3626 3721 448929836 448929741 2.680000e-32 150.0
18 TraesCS2A01G040100 chr4B 96.667 90 3 0 3632 3721 1994974 1994885 2.680000e-32 150.0
19 TraesCS2A01G040100 chr1B 94.845 97 4 1 3632 3728 436383754 436383659 2.680000e-32 150.0
20 TraesCS2A01G040100 chr1B 88.793 116 10 2 3637 3749 117282827 117282712 5.810000e-29 139.0
21 TraesCS2A01G040100 chr7D 91.429 105 9 0 3634 3738 463109041 463109145 1.250000e-30 145.0
22 TraesCS2A01G040100 chr7D 92.079 101 8 0 3631 3731 217476860 217476960 4.490000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G040100 chr2A 16549300 16553609 4309 False 2737.333333 7960 96.032000 1 4310 3 chr2A.!!$F1 4309
1 TraesCS2A01G040100 chr2D 14252214 14256124 3910 False 1671.000000 2390 93.155333 20 4001 3 chr2D.!!$F1 3981
2 TraesCS2A01G040100 chr2B 26098012 26102159 4147 False 776.633333 1973 93.574667 27 4134 6 chr2B.!!$F2 4107

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 124 0.250234 CTTGCAACTCCCCGATCTCA 59.750 55.0 0.00 0.0 0.0 3.27 F
990 1014 0.383949 GGAGATCTGACTGACGAGGC 59.616 60.0 0.00 0.0 0.0 4.70 F
991 1015 0.383949 GAGATCTGACTGACGAGGCC 59.616 60.0 0.00 0.0 0.0 5.19 F
2420 2572 0.618981 AACCACCAGCTAGCTAACCC 59.381 55.0 18.86 0.0 0.0 4.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1709 1766 0.451783 CTTGCTCAATGTAACCGGCC 59.548 55.000 0.00 0.00 0.00 6.13 R
2504 2656 0.315251 GGAGCTCAAGGTTTGGCAAC 59.685 55.000 17.19 0.00 31.84 4.17 R
2928 3130 3.685139 TTAGTTCAGAAGCTGGGTCAG 57.315 47.619 0.00 0.00 31.51 3.51 R
4185 4568 0.109597 GGAACTGTTCGGCATTGCAG 60.110 55.000 13.89 6.72 35.31 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.684413 GCCCCTTTAATCGAGATGAACCA 60.684 47.826 0.00 0.00 0.00 3.67
58 59 6.477033 CCAGATATTCTAACTTGTCTTCACCG 59.523 42.308 0.00 0.00 0.00 4.94
116 124 0.250234 CTTGCAACTCCCCGATCTCA 59.750 55.000 0.00 0.00 0.00 3.27
144 152 6.549433 TCCCCGAGTATAACTGTAACAATT 57.451 37.500 0.00 0.00 0.00 2.32
223 231 8.704668 TGCCTCTTGTTGAACTATATTATGAGA 58.295 33.333 0.00 0.00 0.00 3.27
300 308 4.565166 TCATATGTGTTTTCGTCGATGACC 59.435 41.667 6.88 0.00 0.00 4.02
340 349 2.628559 CCCCCTAGACCTACAACATCCA 60.629 54.545 0.00 0.00 0.00 3.41
348 357 4.080863 AGACCTACAACATCCATGTCTTCC 60.081 45.833 0.00 0.00 40.80 3.46
349 358 3.587061 ACCTACAACATCCATGTCTTCCA 59.413 43.478 0.00 0.00 40.80 3.53
351 360 5.428457 ACCTACAACATCCATGTCTTCCATA 59.572 40.000 0.00 0.00 40.80 2.74
363 372 4.017126 TGTCTTCCATATGACTCGACTGT 58.983 43.478 3.65 0.00 34.57 3.55
364 373 4.462834 TGTCTTCCATATGACTCGACTGTT 59.537 41.667 3.65 0.00 34.57 3.16
366 375 5.289675 GTCTTCCATATGACTCGACTGTTTG 59.710 44.000 3.65 0.00 0.00 2.93
404 413 2.554142 TCTCTAACATGCTCGCCATTG 58.446 47.619 0.00 0.00 29.71 2.82
435 444 4.697756 CGCCTTCCCCACTTCGCA 62.698 66.667 0.00 0.00 0.00 5.10
553 564 0.601841 GGTGGTGTCCATCGAAACGT 60.602 55.000 0.00 0.00 35.28 3.99
608 620 9.673454 CTTTTATTGGGTAGTTAAACAGTGTTC 57.327 33.333 9.40 0.00 0.00 3.18
630 642 1.953686 CGAGCCTCCTTCAAACCAAAA 59.046 47.619 0.00 0.00 0.00 2.44
634 646 2.287608 GCCTCCTTCAAACCAAAACTCG 60.288 50.000 0.00 0.00 0.00 4.18
650 662 1.368345 CTCGCATCCGCACCAATTCA 61.368 55.000 0.00 0.00 38.40 2.57
658 670 2.026641 CCGCACCAATTCAGATTCCAT 58.973 47.619 0.00 0.00 0.00 3.41
715 728 1.134965 CGGTTGACTTTTTGGTGGCAA 60.135 47.619 0.00 0.00 0.00 4.52
772 790 5.286082 CCACAATTAATTAAGAAGCGTGTGC 59.714 40.000 0.00 0.00 43.24 4.57
784 802 1.626654 GCGTGTGCGTGCTCAGTAAT 61.627 55.000 0.00 0.00 40.81 1.89
787 805 2.222508 CGTGTGCGTGCTCAGTAATTAC 60.223 50.000 7.57 7.57 0.00 1.89
854 875 2.746671 CAGTGAGCCAGCCAGCAG 60.747 66.667 0.00 0.00 34.23 4.24
855 876 4.719106 AGTGAGCCAGCCAGCAGC 62.719 66.667 0.00 0.00 44.25 5.25
861 882 3.060615 CCAGCCAGCAGCCACTTC 61.061 66.667 0.00 0.00 45.47 3.01
862 883 2.033757 CAGCCAGCAGCCACTTCT 59.966 61.111 0.00 0.00 45.47 2.85
863 884 1.602888 CAGCCAGCAGCCACTTCTT 60.603 57.895 0.00 0.00 45.47 2.52
864 885 1.303155 AGCCAGCAGCCACTTCTTC 60.303 57.895 0.00 0.00 45.47 2.87
865 886 1.303155 GCCAGCAGCCACTTCTTCT 60.303 57.895 0.00 0.00 34.35 2.85
988 1012 1.946768 GAGGGAGATCTGACTGACGAG 59.053 57.143 0.00 0.00 0.00 4.18
990 1014 0.383949 GGAGATCTGACTGACGAGGC 59.616 60.000 0.00 0.00 0.00 4.70
991 1015 0.383949 GAGATCTGACTGACGAGGCC 59.616 60.000 0.00 0.00 0.00 5.19
995 1019 2.997315 TGACTGACGAGGCCAGGG 60.997 66.667 5.01 0.00 36.03 4.45
1119 1143 2.914536 AGCTCTCTTCTTTCCCCTCTT 58.085 47.619 0.00 0.00 0.00 2.85
1120 1144 2.571202 AGCTCTCTTCTTTCCCCTCTTG 59.429 50.000 0.00 0.00 0.00 3.02
1122 1146 2.571202 CTCTCTTCTTTCCCCTCTTGCT 59.429 50.000 0.00 0.00 0.00 3.91
1130 1170 1.075482 CCCCTCTTGCTTTGCCTGA 59.925 57.895 0.00 0.00 0.00 3.86
1409 1456 0.997932 GCTCAGATCTGCGTCTGTTG 59.002 55.000 18.36 8.34 44.66 3.33
1410 1457 1.638133 CTCAGATCTGCGTCTGTTGG 58.362 55.000 18.36 0.00 44.66 3.77
1411 1458 0.969149 TCAGATCTGCGTCTGTTGGT 59.031 50.000 18.36 0.00 44.66 3.67
1412 1459 1.067565 TCAGATCTGCGTCTGTTGGTC 60.068 52.381 18.36 0.00 44.66 4.02
1413 1460 0.969149 AGATCTGCGTCTGTTGGTCA 59.031 50.000 0.00 0.00 0.00 4.02
1414 1461 1.344438 AGATCTGCGTCTGTTGGTCAA 59.656 47.619 0.00 0.00 0.00 3.18
1421 1468 1.398451 CGTCTGTTGGTCAATTGTCGC 60.398 52.381 5.13 0.00 0.00 5.19
1432 1479 3.372206 GTCAATTGTCGCTGATGCTTACT 59.628 43.478 5.13 0.00 36.97 2.24
1433 1480 3.618594 TCAATTGTCGCTGATGCTTACTC 59.381 43.478 5.13 0.00 36.97 2.59
1434 1481 2.741759 TTGTCGCTGATGCTTACTCA 57.258 45.000 0.00 0.00 36.97 3.41
1435 1482 1.996292 TGTCGCTGATGCTTACTCAC 58.004 50.000 0.00 0.00 36.97 3.51
1436 1483 1.546029 TGTCGCTGATGCTTACTCACT 59.454 47.619 0.00 0.00 36.97 3.41
1437 1484 1.923204 GTCGCTGATGCTTACTCACTG 59.077 52.381 0.00 0.00 36.97 3.66
1438 1485 1.134995 TCGCTGATGCTTACTCACTGG 60.135 52.381 0.00 0.00 36.97 4.00
1439 1486 1.404717 CGCTGATGCTTACTCACTGGT 60.405 52.381 0.00 0.00 36.97 4.00
1455 1502 2.233271 CTGGTGGTGATGCTTTCTGTT 58.767 47.619 0.00 0.00 0.00 3.16
1552 1599 3.847602 CTGCTCCAGCTCCTCCCG 61.848 72.222 0.00 0.00 42.66 5.14
1606 1663 1.308047 AGTGCGTCAACTGAATTGCA 58.692 45.000 0.00 0.00 38.29 4.08
1620 1677 7.223260 ACTGAATTGCATCTCTGAATTTTGA 57.777 32.000 8.75 0.00 0.00 2.69
1622 1679 8.311836 ACTGAATTGCATCTCTGAATTTTGATT 58.688 29.630 8.75 0.00 0.00 2.57
1624 1681 8.092068 TGAATTGCATCTCTGAATTTTGATTGT 58.908 29.630 0.00 0.00 0.00 2.71
1625 1682 8.475331 AATTGCATCTCTGAATTTTGATTGTC 57.525 30.769 0.00 0.00 0.00 3.18
1636 1693 8.633075 TGAATTTTGATTGTCTTCAAAGTGTC 57.367 30.769 0.58 1.60 44.12 3.67
1648 1705 4.472691 TCAAAGTGTCAGCTGAATTTCG 57.527 40.909 20.19 13.37 0.00 3.46
1654 1711 3.122613 GTGTCAGCTGAATTTCGTCTCTG 59.877 47.826 20.19 0.00 0.00 3.35
1656 1713 3.990469 GTCAGCTGAATTTCGTCTCTGAA 59.010 43.478 20.19 0.00 33.15 3.02
1662 1719 6.038714 AGCTGAATTTCGTCTCTGAAAGTTTT 59.961 34.615 0.00 0.00 40.86 2.43
1709 1766 2.357327 TTGTATGGACCGTCTTCACG 57.643 50.000 0.00 0.00 46.29 4.35
1773 1830 5.988310 AGCTAGATCTCTCTCCAATCATG 57.012 43.478 0.00 0.00 32.66 3.07
1793 1851 8.668510 ATCATGTTCAATTACTACTCCATCAC 57.331 34.615 0.00 0.00 0.00 3.06
1797 1855 3.704566 TCAATTACTACTCCATCACGGCT 59.295 43.478 0.00 0.00 33.14 5.52
1811 1869 3.013921 TCACGGCTATGAAATGGAAACC 58.986 45.455 0.00 0.00 0.00 3.27
1813 1871 3.065371 CACGGCTATGAAATGGAAACCTC 59.935 47.826 0.00 0.00 0.00 3.85
1814 1872 3.054361 ACGGCTATGAAATGGAAACCTCT 60.054 43.478 0.00 0.00 0.00 3.69
1815 1873 3.313526 CGGCTATGAAATGGAAACCTCTG 59.686 47.826 0.00 0.00 0.00 3.35
1818 1876 5.189180 GCTATGAAATGGAAACCTCTGACT 58.811 41.667 0.00 0.00 0.00 3.41
1819 1877 5.295540 GCTATGAAATGGAAACCTCTGACTC 59.704 44.000 0.00 0.00 0.00 3.36
1823 1881 2.398754 TGGAAACCTCTGACTCCTCA 57.601 50.000 0.00 0.00 0.00 3.86
1824 1882 2.689658 TGGAAACCTCTGACTCCTCAA 58.310 47.619 0.00 0.00 0.00 3.02
1826 1884 2.635427 GGAAACCTCTGACTCCTCAAGT 59.365 50.000 0.00 0.00 42.42 3.16
1827 1885 3.833070 GGAAACCTCTGACTCCTCAAGTA 59.167 47.826 0.00 0.00 38.74 2.24
1828 1886 4.081917 GGAAACCTCTGACTCCTCAAGTAG 60.082 50.000 0.00 0.00 38.74 2.57
1829 1887 2.452505 ACCTCTGACTCCTCAAGTAGC 58.547 52.381 0.00 0.00 38.74 3.58
1831 1889 2.451490 CTCTGACTCCTCAAGTAGCCA 58.549 52.381 0.00 0.00 38.74 4.75
1832 1890 3.030291 CTCTGACTCCTCAAGTAGCCAT 58.970 50.000 0.00 0.00 38.74 4.40
1833 1891 3.027412 TCTGACTCCTCAAGTAGCCATC 58.973 50.000 0.00 0.00 38.74 3.51
1834 1892 2.102252 CTGACTCCTCAAGTAGCCATCC 59.898 54.545 0.00 0.00 38.74 3.51
1835 1893 2.111384 GACTCCTCAAGTAGCCATCCA 58.889 52.381 0.00 0.00 38.74 3.41
1840 1899 5.191722 ACTCCTCAAGTAGCCATCCAATTAA 59.808 40.000 0.00 0.00 36.07 1.40
1866 1925 5.332743 TCCAAATAAAGAACCATTGGAGCT 58.667 37.500 10.37 2.94 43.33 4.09
1867 1926 5.185635 TCCAAATAAAGAACCATTGGAGCTG 59.814 40.000 10.37 0.00 43.33 4.24
1868 1927 5.185635 CCAAATAAAGAACCATTGGAGCTGA 59.814 40.000 10.37 0.00 42.46 4.26
1869 1928 6.295236 CCAAATAAAGAACCATTGGAGCTGAA 60.295 38.462 10.37 0.00 42.46 3.02
1870 1929 6.521151 AATAAAGAACCATTGGAGCTGAAG 57.479 37.500 10.37 0.00 0.00 3.02
1871 1930 2.503895 AGAACCATTGGAGCTGAAGG 57.496 50.000 10.37 0.00 0.00 3.46
1872 1931 1.988107 AGAACCATTGGAGCTGAAGGA 59.012 47.619 10.37 0.00 0.00 3.36
1873 1932 2.376518 AGAACCATTGGAGCTGAAGGAA 59.623 45.455 10.37 0.00 0.00 3.36
1874 1933 2.978156 ACCATTGGAGCTGAAGGAAA 57.022 45.000 10.37 0.00 0.00 3.13
1875 1934 3.243359 ACCATTGGAGCTGAAGGAAAA 57.757 42.857 10.37 0.00 0.00 2.29
1876 1935 3.782992 ACCATTGGAGCTGAAGGAAAAT 58.217 40.909 10.37 0.00 0.00 1.82
1877 1936 3.512724 ACCATTGGAGCTGAAGGAAAATG 59.487 43.478 10.37 0.00 0.00 2.32
1878 1937 3.518590 CATTGGAGCTGAAGGAAAATGC 58.481 45.455 0.00 0.00 0.00 3.56
1879 1938 2.291209 TGGAGCTGAAGGAAAATGCA 57.709 45.000 0.00 0.00 0.00 3.96
1880 1939 2.811410 TGGAGCTGAAGGAAAATGCAT 58.189 42.857 0.00 0.00 0.00 3.96
1881 1940 2.494471 TGGAGCTGAAGGAAAATGCATG 59.506 45.455 0.00 0.00 0.00 4.06
1882 1941 2.756760 GGAGCTGAAGGAAAATGCATGA 59.243 45.455 0.00 0.00 0.00 3.07
1883 1942 3.428589 GGAGCTGAAGGAAAATGCATGAC 60.429 47.826 0.00 0.00 0.00 3.06
1884 1943 3.428532 AGCTGAAGGAAAATGCATGACT 58.571 40.909 0.00 0.00 0.00 3.41
1892 1951 6.409524 AGGAAAATGCATGACTTTGAAAGA 57.590 33.333 12.53 0.00 0.00 2.52
1895 1954 7.935210 AGGAAAATGCATGACTTTGAAAGAATT 59.065 29.630 12.53 0.00 0.00 2.17
1896 1955 8.562052 GGAAAATGCATGACTTTGAAAGAATTT 58.438 29.630 12.53 5.17 43.98 1.82
1902 1961 6.919662 GCATGACTTTGAAAGAATTTGTCAGA 59.080 34.615 12.53 0.00 39.54 3.27
1912 1971 9.119418 TGAAAGAATTTGTCAGACATCACTTTA 57.881 29.630 3.45 2.66 39.27 1.85
1915 1974 8.545229 AGAATTTGTCAGACATCACTTTAGAG 57.455 34.615 3.45 0.00 0.00 2.43
1916 1975 8.153550 AGAATTTGTCAGACATCACTTTAGAGT 58.846 33.333 3.45 0.00 36.25 3.24
1921 2006 6.153510 TGTCAGACATCACTTTAGAGTAGCAT 59.846 38.462 0.00 0.00 33.90 3.79
1975 2091 2.223572 GGAACAGCCTTTGTGTGTTCTG 60.224 50.000 12.70 0.00 46.16 3.02
1976 2092 0.740737 ACAGCCTTTGTGTGTTCTGC 59.259 50.000 0.00 0.00 38.99 4.26
1979 2095 2.024918 CCTTTGTGTGTTCTGCGCT 58.975 52.632 9.73 0.00 0.00 5.92
2249 2401 9.679661 TGCTTATTTCCATTTAGAACACATAGA 57.320 29.630 0.00 0.00 0.00 1.98
2286 2438 3.788937 TGTGCGCTTATTACCCTTCTAC 58.211 45.455 9.73 0.00 0.00 2.59
2347 2499 5.897377 ACTATGATTGTTTGGGCTTACAC 57.103 39.130 0.00 0.00 0.00 2.90
2357 2509 3.343941 TGGGCTTACACACTATTGTCC 57.656 47.619 0.00 0.00 31.66 4.02
2398 2550 3.181484 TGCTGGCTGAAATATTGCACATC 60.181 43.478 0.00 0.00 0.00 3.06
2420 2572 0.618981 AACCACCAGCTAGCTAACCC 59.381 55.000 18.86 0.00 0.00 4.11
2427 2579 2.370189 CCAGCTAGCTAACCCTGCTATT 59.630 50.000 18.86 0.00 41.45 1.73
2504 2656 2.633509 GGTTGGCCTGAAGCAGCTG 61.634 63.158 10.11 10.11 46.50 4.24
2616 2768 9.485206 CTAAGGCGGTAATTATACTGTTGTATT 57.515 33.333 0.00 0.00 40.04 1.89
2662 2816 3.732212 TGTTGATGTGGAGTTCTCTGTG 58.268 45.455 0.00 0.00 0.00 3.66
2899 3064 4.119136 CCATGCGGTAATTTTGAATTCCC 58.881 43.478 2.27 0.00 0.00 3.97
2928 3130 0.179018 ACTGGCAAAGTCTGTCCCAC 60.179 55.000 0.00 0.00 31.64 4.61
2961 3170 7.934120 AGCTTCTGAACTAATCTTTACTGTGTT 59.066 33.333 0.00 0.00 0.00 3.32
2998 3207 2.143925 GTCACAGACCCAGTTGCTAAC 58.856 52.381 0.00 0.00 0.00 2.34
3097 3306 4.523173 TCGAGAAGAAGGTACAGTTCACAT 59.477 41.667 9.24 0.00 0.00 3.21
3101 3310 4.292186 AGAAGGTACAGTTCACATGCAT 57.708 40.909 0.00 0.00 0.00 3.96
3138 3347 7.176515 ACATGAATCCACAAAATGCTAGTACAA 59.823 33.333 0.00 0.00 0.00 2.41
3172 3381 5.152623 ACTCGAAATCATGAGTTCTTGGA 57.847 39.130 27.64 18.60 42.61 3.53
3174 3383 6.176183 ACTCGAAATCATGAGTTCTTGGAAT 58.824 36.000 27.64 10.05 42.61 3.01
3194 3403 7.961351 TGGAATACATTTCATTGTTCCAAAGT 58.039 30.769 2.40 0.00 34.90 2.66
3205 3414 2.158957 TGTTCCAAAGTTCACGAGCTCT 60.159 45.455 12.85 0.00 0.00 4.09
3207 3416 4.246458 GTTCCAAAGTTCACGAGCTCTAT 58.754 43.478 12.85 0.00 0.00 1.98
3264 3473 3.202706 GAAAGGATGGCCGCGGAC 61.203 66.667 33.48 31.04 39.96 4.79
3313 3525 3.259064 CACTCCGCGGAAGATTAAGAAA 58.741 45.455 30.53 1.31 0.00 2.52
3334 3546 2.775032 TTTCCCCTGTGCTACGTCGC 62.775 60.000 4.90 4.90 0.00 5.19
3382 3594 2.930682 GTGCTTTGTAACTCCTCGGATC 59.069 50.000 0.00 0.00 0.00 3.36
3641 3854 9.774742 GTGATTTCAGTCAAACAATAATACTCC 57.225 33.333 0.00 0.00 0.00 3.85
3642 3855 8.956426 TGATTTCAGTCAAACAATAATACTCCC 58.044 33.333 0.00 0.00 0.00 4.30
3643 3856 9.178758 GATTTCAGTCAAACAATAATACTCCCT 57.821 33.333 0.00 0.00 0.00 4.20
3644 3857 8.561738 TTTCAGTCAAACAATAATACTCCCTC 57.438 34.615 0.00 0.00 0.00 4.30
3645 3858 6.650120 TCAGTCAAACAATAATACTCCCTCC 58.350 40.000 0.00 0.00 0.00 4.30
3646 3859 5.523916 CAGTCAAACAATAATACTCCCTCCG 59.476 44.000 0.00 0.00 0.00 4.63
3647 3860 5.189145 AGTCAAACAATAATACTCCCTCCGT 59.811 40.000 0.00 0.00 0.00 4.69
3648 3861 5.522824 GTCAAACAATAATACTCCCTCCGTC 59.477 44.000 0.00 0.00 0.00 4.79
3649 3862 4.684484 AACAATAATACTCCCTCCGTCC 57.316 45.455 0.00 0.00 0.00 4.79
3650 3863 2.970640 ACAATAATACTCCCTCCGTCCC 59.029 50.000 0.00 0.00 0.00 4.46
3651 3864 2.969950 CAATAATACTCCCTCCGTCCCA 59.030 50.000 0.00 0.00 0.00 4.37
3652 3865 3.562108 ATAATACTCCCTCCGTCCCAT 57.438 47.619 0.00 0.00 0.00 4.00
3653 3866 4.687262 ATAATACTCCCTCCGTCCCATA 57.313 45.455 0.00 0.00 0.00 2.74
3654 3867 3.339713 AATACTCCCTCCGTCCCATAA 57.660 47.619 0.00 0.00 0.00 1.90
3655 3868 3.562108 ATACTCCCTCCGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
3656 3869 4.687262 ATACTCCCTCCGTCCCATAATA 57.313 45.455 0.00 0.00 0.00 0.98
3657 3870 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3658 3871 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3659 3872 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3660 3873 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3661 3874 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3662 3875 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
3663 3876 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
3664 3877 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
3665 3878 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
3666 3879 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
3667 3880 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
3668 3881 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
3669 3882 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
3670 3883 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
3671 3884 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
3672 3885 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
3673 3886 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
3674 3887 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
3681 3894 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
3682 3895 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
3683 3896 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
3697 3910 6.827727 ACTAGTGTAGTGTCAAAAATGTCCT 58.172 36.000 0.00 0.00 37.69 3.85
3698 3911 7.280356 ACTAGTGTAGTGTCAAAAATGTCCTT 58.720 34.615 0.00 0.00 37.69 3.36
3699 3912 8.426489 ACTAGTGTAGTGTCAAAAATGTCCTTA 58.574 33.333 0.00 0.00 37.69 2.69
3700 3913 9.436957 CTAGTGTAGTGTCAAAAATGTCCTTAT 57.563 33.333 0.00 0.00 0.00 1.73
3702 3915 9.959721 AGTGTAGTGTCAAAAATGTCCTTATAT 57.040 29.630 0.00 0.00 0.00 0.86
3708 3921 9.965824 GTGTCAAAAATGTCCTTATATTATGGG 57.034 33.333 0.00 0.00 0.00 4.00
3709 3922 9.928618 TGTCAAAAATGTCCTTATATTATGGGA 57.071 29.630 0.00 0.00 0.00 4.37
3787 4161 5.163561 GCCCAAAGTATTCGGATCAAATTGA 60.164 40.000 0.00 0.00 0.00 2.57
3969 4352 4.591202 CCACAATTGTTATGCAGATCGAC 58.409 43.478 8.77 0.00 0.00 4.20
3972 4355 5.961843 CACAATTGTTATGCAGATCGACTTC 59.038 40.000 8.77 0.00 0.00 3.01
4003 4386 8.085296 ACTTATTGTGTATAGTCTGCTCATAGC 58.915 37.037 0.00 0.00 42.82 2.97
4004 4387 6.662865 ATTGTGTATAGTCTGCTCATAGCT 57.337 37.500 0.00 0.00 42.97 3.32
4005 4388 6.471233 TTGTGTATAGTCTGCTCATAGCTT 57.529 37.500 0.00 0.00 42.97 3.74
4006 4389 5.836347 TGTGTATAGTCTGCTCATAGCTTG 58.164 41.667 0.00 0.00 42.97 4.01
4007 4390 4.683781 GTGTATAGTCTGCTCATAGCTTGC 59.316 45.833 0.00 0.00 42.97 4.01
4008 4391 4.586421 TGTATAGTCTGCTCATAGCTTGCT 59.414 41.667 0.00 0.00 42.97 3.91
4009 4392 4.686191 ATAGTCTGCTCATAGCTTGCTT 57.314 40.909 0.00 0.00 42.97 3.91
4010 4393 3.347077 AGTCTGCTCATAGCTTGCTTT 57.653 42.857 0.00 0.00 42.97 3.51
4011 4394 4.478206 AGTCTGCTCATAGCTTGCTTTA 57.522 40.909 0.00 0.00 42.97 1.85
4012 4395 5.033589 AGTCTGCTCATAGCTTGCTTTAT 57.966 39.130 0.00 0.00 42.97 1.40
4013 4396 6.166984 AGTCTGCTCATAGCTTGCTTTATA 57.833 37.500 0.00 0.00 42.97 0.98
4014 4397 6.586344 AGTCTGCTCATAGCTTGCTTTATAA 58.414 36.000 0.00 0.00 42.97 0.98
4015 4398 7.222872 AGTCTGCTCATAGCTTGCTTTATAAT 58.777 34.615 0.00 0.00 42.97 1.28
4016 4399 7.387397 AGTCTGCTCATAGCTTGCTTTATAATC 59.613 37.037 0.00 0.00 42.97 1.75
4017 4400 7.387397 GTCTGCTCATAGCTTGCTTTATAATCT 59.613 37.037 0.00 0.00 42.97 2.40
4018 4401 7.387122 TCTGCTCATAGCTTGCTTTATAATCTG 59.613 37.037 0.00 0.00 42.97 2.90
4019 4402 7.219322 TGCTCATAGCTTGCTTTATAATCTGA 58.781 34.615 0.00 0.00 42.97 3.27
4020 4403 7.716560 TGCTCATAGCTTGCTTTATAATCTGAA 59.283 33.333 0.00 0.00 42.97 3.02
4021 4404 8.229137 GCTCATAGCTTGCTTTATAATCTGAAG 58.771 37.037 0.00 0.00 38.45 3.02
4022 4405 8.092521 TCATAGCTTGCTTTATAATCTGAAGC 57.907 34.615 0.00 0.00 44.54 3.86
4023 4406 5.415415 AGCTTGCTTTATAATCTGAAGCG 57.585 39.130 0.00 0.00 46.61 4.68
4024 4407 4.274459 AGCTTGCTTTATAATCTGAAGCGG 59.726 41.667 0.00 4.89 46.61 5.52
4025 4408 4.555511 GCTTGCTTTATAATCTGAAGCGGG 60.556 45.833 0.00 0.00 46.61 6.13
4026 4409 3.476552 TGCTTTATAATCTGAAGCGGGG 58.523 45.455 0.00 0.00 46.61 5.73
4027 4410 2.814336 GCTTTATAATCTGAAGCGGGGG 59.186 50.000 0.00 0.00 36.82 5.40
4028 4411 3.496160 GCTTTATAATCTGAAGCGGGGGA 60.496 47.826 0.00 0.00 36.82 4.81
4029 4412 4.714632 CTTTATAATCTGAAGCGGGGGAA 58.285 43.478 0.00 0.00 0.00 3.97
4030 4413 4.781775 TTATAATCTGAAGCGGGGGAAA 57.218 40.909 0.00 0.00 0.00 3.13
4031 4414 2.413310 TAATCTGAAGCGGGGGAAAC 57.587 50.000 0.00 0.00 0.00 2.78
4063 4446 7.870509 TTTTTGTCATATTCTGCTCATAGCT 57.129 32.000 0.00 0.00 42.97 3.32
4064 4447 7.870509 TTTTGTCATATTCTGCTCATAGCTT 57.129 32.000 0.00 0.00 42.97 3.74
4065 4448 6.856135 TTGTCATATTCTGCTCATAGCTTG 57.144 37.500 0.00 0.00 42.97 4.01
4066 4449 4.753610 TGTCATATTCTGCTCATAGCTTGC 59.246 41.667 0.00 0.00 42.97 4.01
4067 4450 4.996122 GTCATATTCTGCTCATAGCTTGCT 59.004 41.667 0.00 0.00 42.97 3.91
4068 4451 5.469421 GTCATATTCTGCTCATAGCTTGCTT 59.531 40.000 0.00 0.00 42.97 3.91
4069 4452 6.017275 GTCATATTCTGCTCATAGCTTGCTTT 60.017 38.462 0.00 0.00 42.97 3.51
4070 4453 7.172190 GTCATATTCTGCTCATAGCTTGCTTTA 59.828 37.037 0.00 0.00 42.97 1.85
4071 4454 7.881751 TCATATTCTGCTCATAGCTTGCTTTAT 59.118 33.333 0.00 0.00 42.97 1.40
4072 4455 9.159364 CATATTCTGCTCATAGCTTGCTTTATA 57.841 33.333 0.00 0.00 42.97 0.98
4073 4456 9.730705 ATATTCTGCTCATAGCTTGCTTTATAA 57.269 29.630 0.00 0.00 42.97 0.98
4074 4457 8.632906 ATTCTGCTCATAGCTTGCTTTATAAT 57.367 30.769 0.00 0.00 42.97 1.28
4075 4458 7.664082 TCTGCTCATAGCTTGCTTTATAATC 57.336 36.000 0.00 0.00 42.97 1.75
4076 4459 7.448420 TCTGCTCATAGCTTGCTTTATAATCT 58.552 34.615 0.00 0.00 42.97 2.40
4077 4460 7.387122 TCTGCTCATAGCTTGCTTTATAATCTG 59.613 37.037 0.00 0.00 42.97 2.90
4078 4461 7.219322 TGCTCATAGCTTGCTTTATAATCTGA 58.781 34.615 0.00 0.00 42.97 3.27
4079 4462 7.716560 TGCTCATAGCTTGCTTTATAATCTGAA 59.283 33.333 0.00 0.00 42.97 3.02
4080 4463 8.229137 GCTCATAGCTTGCTTTATAATCTGAAG 58.771 37.037 0.00 0.00 38.45 3.02
4081 4464 8.092521 TCATAGCTTGCTTTATAATCTGAAGC 57.907 34.615 0.00 0.00 44.54 3.86
4082 4465 5.415415 AGCTTGCTTTATAATCTGAAGCG 57.585 39.130 0.00 0.00 46.61 4.68
4083 4466 4.274459 AGCTTGCTTTATAATCTGAAGCGG 59.726 41.667 0.00 4.89 46.61 5.52
4084 4467 4.555511 GCTTGCTTTATAATCTGAAGCGGG 60.556 45.833 0.00 0.00 46.61 6.13
4085 4468 3.476552 TGCTTTATAATCTGAAGCGGGG 58.523 45.455 0.00 0.00 46.61 5.73
4086 4469 2.814336 GCTTTATAATCTGAAGCGGGGG 59.186 50.000 0.00 0.00 36.82 5.40
4087 4470 3.496160 GCTTTATAATCTGAAGCGGGGGA 60.496 47.826 0.00 0.00 36.82 4.81
4088 4471 4.714632 CTTTATAATCTGAAGCGGGGGAA 58.285 43.478 0.00 0.00 0.00 3.97
4089 4472 4.781775 TTATAATCTGAAGCGGGGGAAA 57.218 40.909 0.00 0.00 0.00 3.13
4090 4473 2.413310 TAATCTGAAGCGGGGGAAAC 57.587 50.000 0.00 0.00 0.00 2.78
4134 4517 6.704937 TCTGCTCATAGTATCAAAAGCTGATG 59.295 38.462 0.00 0.00 44.84 3.07
4135 4518 5.761726 TGCTCATAGTATCAAAAGCTGATGG 59.238 40.000 0.00 0.00 44.84 3.51
4136 4519 5.762218 GCTCATAGTATCAAAAGCTGATGGT 59.238 40.000 0.00 0.00 44.84 3.55
4137 4520 6.073331 GCTCATAGTATCAAAAGCTGATGGTC 60.073 42.308 0.00 0.00 44.84 4.02
4138 4521 6.888105 TCATAGTATCAAAAGCTGATGGTCA 58.112 36.000 0.00 0.00 44.84 4.02
4139 4522 7.337938 TCATAGTATCAAAAGCTGATGGTCAA 58.662 34.615 0.00 0.00 44.84 3.18
4140 4523 7.828717 TCATAGTATCAAAAGCTGATGGTCAAA 59.171 33.333 0.00 0.00 44.84 2.69
4141 4524 8.627403 CATAGTATCAAAAGCTGATGGTCAAAT 58.373 33.333 0.00 0.00 44.84 2.32
4142 4525 6.860080 AGTATCAAAAGCTGATGGTCAAATG 58.140 36.000 0.00 0.00 44.84 2.32
4143 4526 5.988310 ATCAAAAGCTGATGGTCAAATGA 57.012 34.783 0.00 0.00 43.49 2.57
4144 4527 5.787953 TCAAAAGCTGATGGTCAAATGAA 57.212 34.783 0.00 0.00 0.00 2.57
4145 4528 6.159299 TCAAAAGCTGATGGTCAAATGAAA 57.841 33.333 0.00 0.00 0.00 2.69
4146 4529 6.580788 TCAAAAGCTGATGGTCAAATGAAAA 58.419 32.000 0.00 0.00 0.00 2.29
4147 4530 7.046652 TCAAAAGCTGATGGTCAAATGAAAAA 58.953 30.769 0.00 0.00 0.00 1.94
4166 4549 2.749340 AAAAATGCAGCTGAGCCCA 58.251 47.368 20.43 5.99 0.00 5.36
4167 4550 0.319405 AAAAATGCAGCTGAGCCCAC 59.681 50.000 20.43 0.00 0.00 4.61
4168 4551 1.870055 AAAATGCAGCTGAGCCCACG 61.870 55.000 20.43 0.00 0.00 4.94
4169 4552 2.753009 AAATGCAGCTGAGCCCACGA 62.753 55.000 20.43 0.00 0.00 4.35
4170 4553 2.753009 AATGCAGCTGAGCCCACGAA 62.753 55.000 20.43 0.00 0.00 3.85
4171 4554 2.437359 GCAGCTGAGCCCACGAAT 60.437 61.111 20.43 0.00 0.00 3.34
4172 4555 2.758089 GCAGCTGAGCCCACGAATG 61.758 63.158 20.43 0.00 0.00 2.67
4173 4556 1.078918 CAGCTGAGCCCACGAATGA 60.079 57.895 8.42 0.00 0.00 2.57
4174 4557 0.674581 CAGCTGAGCCCACGAATGAA 60.675 55.000 8.42 0.00 0.00 2.57
4175 4558 0.254178 AGCTGAGCCCACGAATGAAT 59.746 50.000 0.00 0.00 0.00 2.57
4176 4559 1.486310 AGCTGAGCCCACGAATGAATA 59.514 47.619 0.00 0.00 0.00 1.75
4177 4560 2.105477 AGCTGAGCCCACGAATGAATAT 59.895 45.455 0.00 0.00 0.00 1.28
4178 4561 2.880890 GCTGAGCCCACGAATGAATATT 59.119 45.455 0.00 0.00 0.00 1.28
4179 4562 4.065088 GCTGAGCCCACGAATGAATATTA 58.935 43.478 0.00 0.00 0.00 0.98
4180 4563 4.153117 GCTGAGCCCACGAATGAATATTAG 59.847 45.833 0.00 0.00 0.00 1.73
4181 4564 5.290493 TGAGCCCACGAATGAATATTAGT 57.710 39.130 0.00 0.00 33.18 2.24
4182 4565 5.297547 TGAGCCCACGAATGAATATTAGTC 58.702 41.667 0.00 0.00 30.96 2.59
4183 4566 4.642429 AGCCCACGAATGAATATTAGTCC 58.358 43.478 0.00 0.00 30.96 3.85
4184 4567 4.102524 AGCCCACGAATGAATATTAGTCCA 59.897 41.667 0.00 0.00 30.96 4.02
4185 4568 4.213482 GCCCACGAATGAATATTAGTCCAC 59.787 45.833 0.00 0.00 30.96 4.02
4186 4569 5.611374 CCCACGAATGAATATTAGTCCACT 58.389 41.667 0.00 0.00 30.96 4.00
4187 4570 5.466728 CCCACGAATGAATATTAGTCCACTG 59.533 44.000 0.00 0.00 30.96 3.66
4188 4571 5.050091 CCACGAATGAATATTAGTCCACTGC 60.050 44.000 0.00 0.00 30.96 4.40
4189 4572 5.523552 CACGAATGAATATTAGTCCACTGCA 59.476 40.000 0.00 0.00 30.96 4.41
4190 4573 6.037062 CACGAATGAATATTAGTCCACTGCAA 59.963 38.462 0.00 0.00 30.96 4.08
4191 4574 6.767902 ACGAATGAATATTAGTCCACTGCAAT 59.232 34.615 0.00 0.00 27.56 3.56
4192 4575 7.073883 CGAATGAATATTAGTCCACTGCAATG 58.926 38.462 0.00 0.00 0.00 2.82
4193 4576 5.756195 TGAATATTAGTCCACTGCAATGC 57.244 39.130 0.00 0.00 0.00 3.56
4194 4577 4.580167 TGAATATTAGTCCACTGCAATGCC 59.420 41.667 1.53 0.00 0.00 4.40
4195 4578 1.382522 ATTAGTCCACTGCAATGCCG 58.617 50.000 1.53 0.00 0.00 5.69
4196 4579 0.323302 TTAGTCCACTGCAATGCCGA 59.677 50.000 1.53 0.00 0.00 5.54
4197 4580 0.323302 TAGTCCACTGCAATGCCGAA 59.677 50.000 1.53 0.00 0.00 4.30
4198 4581 1.210155 GTCCACTGCAATGCCGAAC 59.790 57.895 1.53 0.00 0.00 3.95
4199 4582 1.228094 TCCACTGCAATGCCGAACA 60.228 52.632 1.53 0.00 0.00 3.18
4200 4583 1.210931 CCACTGCAATGCCGAACAG 59.789 57.895 1.53 0.00 36.22 3.16
4201 4584 1.518056 CCACTGCAATGCCGAACAGT 61.518 55.000 1.53 0.00 43.92 3.55
4202 4585 0.311790 CACTGCAATGCCGAACAGTT 59.688 50.000 1.53 0.00 41.28 3.16
4203 4586 0.593128 ACTGCAATGCCGAACAGTTC 59.407 50.000 1.53 2.85 40.35 3.01
4204 4587 0.109597 CTGCAATGCCGAACAGTTCC 60.110 55.000 7.76 0.00 0.00 3.62
4205 4588 0.821301 TGCAATGCCGAACAGTTCCA 60.821 50.000 7.76 1.34 0.00 3.53
4206 4589 0.527565 GCAATGCCGAACAGTTCCAT 59.472 50.000 7.76 3.70 0.00 3.41
4207 4590 1.067635 GCAATGCCGAACAGTTCCATT 60.068 47.619 7.76 9.35 0.00 3.16
4208 4591 2.610232 GCAATGCCGAACAGTTCCATTT 60.610 45.455 12.61 0.00 0.00 2.32
4209 4592 3.366883 GCAATGCCGAACAGTTCCATTTA 60.367 43.478 12.61 0.00 0.00 1.40
4210 4593 4.804108 CAATGCCGAACAGTTCCATTTAA 58.196 39.130 12.61 0.00 0.00 1.52
4211 4594 5.226396 CAATGCCGAACAGTTCCATTTAAA 58.774 37.500 12.61 0.00 0.00 1.52
4212 4595 4.920640 TGCCGAACAGTTCCATTTAAAA 57.079 36.364 7.76 0.00 0.00 1.52
4213 4596 5.263968 TGCCGAACAGTTCCATTTAAAAA 57.736 34.783 7.76 0.00 0.00 1.94
4214 4597 5.848406 TGCCGAACAGTTCCATTTAAAAAT 58.152 33.333 7.76 0.00 0.00 1.82
4215 4598 6.982852 TGCCGAACAGTTCCATTTAAAAATA 58.017 32.000 7.76 0.00 0.00 1.40
4216 4599 7.607250 TGCCGAACAGTTCCATTTAAAAATAT 58.393 30.769 7.76 0.00 0.00 1.28
4217 4600 8.091449 TGCCGAACAGTTCCATTTAAAAATATT 58.909 29.630 7.76 0.00 0.00 1.28
4218 4601 8.592155 GCCGAACAGTTCCATTTAAAAATATTC 58.408 33.333 7.76 0.00 0.00 1.75
4219 4602 9.855021 CCGAACAGTTCCATTTAAAAATATTCT 57.145 29.630 7.76 0.00 0.00 2.40
4227 4610 8.925161 TCCATTTAAAAATATTCTTTGCTCGG 57.075 30.769 0.00 0.00 0.00 4.63
4228 4611 7.978975 TCCATTTAAAAATATTCTTTGCTCGGG 59.021 33.333 0.00 0.00 0.00 5.14
4229 4612 7.763985 CCATTTAAAAATATTCTTTGCTCGGGT 59.236 33.333 0.00 0.00 0.00 5.28
4230 4613 8.594687 CATTTAAAAATATTCTTTGCTCGGGTG 58.405 33.333 0.00 0.00 0.00 4.61
4231 4614 4.718940 AAAATATTCTTTGCTCGGGTGG 57.281 40.909 0.00 0.00 0.00 4.61
4232 4615 3.644966 AATATTCTTTGCTCGGGTGGA 57.355 42.857 0.00 0.00 0.00 4.02
4233 4616 3.644966 ATATTCTTTGCTCGGGTGGAA 57.355 42.857 0.00 0.00 0.00 3.53
4234 4617 2.286365 ATTCTTTGCTCGGGTGGAAA 57.714 45.000 0.00 0.00 0.00 3.13
4235 4618 2.286365 TTCTTTGCTCGGGTGGAAAT 57.714 45.000 0.00 0.00 0.00 2.17
4236 4619 2.286365 TCTTTGCTCGGGTGGAAATT 57.714 45.000 0.00 0.00 0.00 1.82
4237 4620 2.593026 TCTTTGCTCGGGTGGAAATTT 58.407 42.857 0.00 0.00 0.00 1.82
4238 4621 3.757270 TCTTTGCTCGGGTGGAAATTTA 58.243 40.909 0.00 0.00 0.00 1.40
4239 4622 3.504520 TCTTTGCTCGGGTGGAAATTTAC 59.495 43.478 0.00 0.00 0.00 2.01
4240 4623 2.570415 TGCTCGGGTGGAAATTTACA 57.430 45.000 0.00 0.00 0.00 2.41
4241 4624 2.865079 TGCTCGGGTGGAAATTTACAA 58.135 42.857 4.20 0.00 0.00 2.41
4242 4625 2.817258 TGCTCGGGTGGAAATTTACAAG 59.183 45.455 4.20 0.00 0.00 3.16
4243 4626 3.078837 GCTCGGGTGGAAATTTACAAGA 58.921 45.455 4.20 4.65 0.00 3.02
4244 4627 3.504520 GCTCGGGTGGAAATTTACAAGAA 59.495 43.478 4.20 0.00 0.00 2.52
4245 4628 4.615223 GCTCGGGTGGAAATTTACAAGAAC 60.615 45.833 4.20 0.00 0.00 3.01
4246 4629 4.462133 TCGGGTGGAAATTTACAAGAACA 58.538 39.130 4.20 0.00 0.00 3.18
4247 4630 5.074115 TCGGGTGGAAATTTACAAGAACAT 58.926 37.500 4.20 0.00 0.00 2.71
4248 4631 5.048364 TCGGGTGGAAATTTACAAGAACATG 60.048 40.000 4.20 0.00 0.00 3.21
4249 4632 5.478407 GGGTGGAAATTTACAAGAACATGG 58.522 41.667 4.20 0.00 0.00 3.66
4250 4633 5.245075 GGGTGGAAATTTACAAGAACATGGA 59.755 40.000 4.20 0.00 0.00 3.41
4251 4634 6.389906 GGTGGAAATTTACAAGAACATGGAG 58.610 40.000 4.20 0.00 0.00 3.86
4252 4635 6.208599 GGTGGAAATTTACAAGAACATGGAGA 59.791 38.462 4.20 0.00 0.00 3.71
4253 4636 7.093771 GGTGGAAATTTACAAGAACATGGAGAT 60.094 37.037 4.20 0.00 0.00 2.75
4254 4637 7.756722 GTGGAAATTTACAAGAACATGGAGATG 59.243 37.037 4.20 0.00 35.49 2.90
4255 4638 6.753744 GGAAATTTACAAGAACATGGAGATGC 59.246 38.462 0.00 0.00 32.14 3.91
4256 4639 6.839124 AATTTACAAGAACATGGAGATGCA 57.161 33.333 0.00 0.00 32.14 3.96
4257 4640 5.627499 TTTACAAGAACATGGAGATGCAC 57.373 39.130 0.00 0.00 32.14 4.57
4258 4641 3.144657 ACAAGAACATGGAGATGCACA 57.855 42.857 0.00 0.00 32.14 4.57
4259 4642 3.693807 ACAAGAACATGGAGATGCACAT 58.306 40.909 0.00 0.00 32.14 3.21
4260 4643 4.084287 ACAAGAACATGGAGATGCACATT 58.916 39.130 0.00 0.00 32.14 2.71
4261 4644 4.525487 ACAAGAACATGGAGATGCACATTT 59.475 37.500 0.00 0.00 32.14 2.32
4262 4645 5.011329 ACAAGAACATGGAGATGCACATTTT 59.989 36.000 0.00 0.00 32.14 1.82
4263 4646 6.209192 ACAAGAACATGGAGATGCACATTTTA 59.791 34.615 0.00 0.00 32.14 1.52
4264 4647 7.093640 ACAAGAACATGGAGATGCACATTTTAT 60.094 33.333 0.00 0.00 32.14 1.40
4265 4648 8.407832 CAAGAACATGGAGATGCACATTTTATA 58.592 33.333 0.00 0.00 32.14 0.98
4266 4649 7.934457 AGAACATGGAGATGCACATTTTATAC 58.066 34.615 0.00 0.00 32.14 1.47
4267 4650 6.304356 ACATGGAGATGCACATTTTATACG 57.696 37.500 0.00 0.00 32.14 3.06
4268 4651 6.054941 ACATGGAGATGCACATTTTATACGA 58.945 36.000 0.00 0.00 32.14 3.43
4269 4652 6.203530 ACATGGAGATGCACATTTTATACGAG 59.796 38.462 0.00 0.00 32.14 4.18
4270 4653 5.670485 TGGAGATGCACATTTTATACGAGT 58.330 37.500 0.00 0.00 0.00 4.18
4271 4654 5.523552 TGGAGATGCACATTTTATACGAGTG 59.476 40.000 0.00 0.00 0.00 3.51
4272 4655 5.753438 GGAGATGCACATTTTATACGAGTGA 59.247 40.000 0.00 0.00 32.14 3.41
4273 4656 6.425114 GGAGATGCACATTTTATACGAGTGAT 59.575 38.462 0.00 0.00 32.14 3.06
4274 4657 7.359598 GGAGATGCACATTTTATACGAGTGATC 60.360 40.741 0.00 0.00 32.14 2.92
4275 4658 7.212976 AGATGCACATTTTATACGAGTGATCT 58.787 34.615 0.00 0.00 32.14 2.75
4276 4659 7.712639 AGATGCACATTTTATACGAGTGATCTT 59.287 33.333 0.00 0.00 30.41 2.40
4277 4660 7.609760 TGCACATTTTATACGAGTGATCTTT 57.390 32.000 0.00 0.00 32.14 2.52
4278 4661 7.684670 TGCACATTTTATACGAGTGATCTTTC 58.315 34.615 0.00 0.00 32.14 2.62
4279 4662 7.549134 TGCACATTTTATACGAGTGATCTTTCT 59.451 33.333 0.00 0.00 32.14 2.52
4280 4663 7.848051 GCACATTTTATACGAGTGATCTTTCTG 59.152 37.037 0.00 0.00 32.14 3.02
4281 4664 8.873830 CACATTTTATACGAGTGATCTTTCTGT 58.126 33.333 0.00 0.00 32.14 3.41
4282 4665 8.873830 ACATTTTATACGAGTGATCTTTCTGTG 58.126 33.333 0.00 0.00 0.00 3.66
4283 4666 9.087424 CATTTTATACGAGTGATCTTTCTGTGA 57.913 33.333 0.00 0.00 0.00 3.58
4284 4667 8.462143 TTTTATACGAGTGATCTTTCTGTGAC 57.538 34.615 0.00 0.00 0.00 3.67
4285 4668 5.906113 ATACGAGTGATCTTTCTGTGACT 57.094 39.130 0.00 0.00 0.00 3.41
4286 4669 4.592485 ACGAGTGATCTTTCTGTGACTT 57.408 40.909 0.00 0.00 0.00 3.01
4287 4670 4.950050 ACGAGTGATCTTTCTGTGACTTT 58.050 39.130 0.00 0.00 0.00 2.66
4288 4671 5.360591 ACGAGTGATCTTTCTGTGACTTTT 58.639 37.500 0.00 0.00 0.00 2.27
4289 4672 5.817816 ACGAGTGATCTTTCTGTGACTTTTT 59.182 36.000 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.433436 GATTAAAGGGGCACGTTCAGT 58.567 47.619 0.00 0.00 0.00 3.41
5 6 1.396996 CGATTAAAGGGGCACGTTCAG 59.603 52.381 0.00 0.00 0.00 3.02
6 7 1.002201 TCGATTAAAGGGGCACGTTCA 59.998 47.619 0.00 0.00 0.00 3.18
7 8 1.664151 CTCGATTAAAGGGGCACGTTC 59.336 52.381 0.00 0.00 0.00 3.95
8 9 1.276989 TCTCGATTAAAGGGGCACGTT 59.723 47.619 0.00 0.00 0.00 3.99
9 10 0.899720 TCTCGATTAAAGGGGCACGT 59.100 50.000 0.00 0.00 0.00 4.49
10 11 1.867233 CATCTCGATTAAAGGGGCACG 59.133 52.381 0.00 0.00 0.00 5.34
11 12 3.194005 TCATCTCGATTAAAGGGGCAC 57.806 47.619 0.00 0.00 0.00 5.01
12 13 3.541632 GTTCATCTCGATTAAAGGGGCA 58.458 45.455 0.00 0.00 0.00 5.36
13 14 2.879026 GGTTCATCTCGATTAAAGGGGC 59.121 50.000 0.00 0.00 0.00 5.80
14 15 4.130118 CTGGTTCATCTCGATTAAAGGGG 58.870 47.826 0.00 0.00 0.00 4.79
15 16 5.023533 TCTGGTTCATCTCGATTAAAGGG 57.976 43.478 0.00 0.00 0.00 3.95
16 17 8.839310 AATATCTGGTTCATCTCGATTAAAGG 57.161 34.615 0.00 0.00 0.00 3.11
17 18 9.703892 AGAATATCTGGTTCATCTCGATTAAAG 57.296 33.333 0.00 0.00 0.00 1.85
35 36 6.574350 CCGGTGAAGACAAGTTAGAATATCT 58.426 40.000 0.00 0.00 0.00 1.98
58 59 3.750130 TCATAGTCGTCCTTATCGTAGCC 59.250 47.826 0.00 0.00 0.00 3.93
97 101 0.250234 TGAGATCGGGGAGTTGCAAG 59.750 55.000 0.00 0.00 0.00 4.01
98 102 0.250234 CTGAGATCGGGGAGTTGCAA 59.750 55.000 0.00 0.00 0.00 4.08
116 124 3.912248 ACAGTTATACTCGGGGATGTCT 58.088 45.455 0.00 0.00 0.00 3.41
144 152 5.728637 AGCTCATCGGTTACATCATGATA 57.271 39.130 8.15 0.00 0.00 2.15
249 257 3.823873 TCATTGTTGATGGTGGTGGTTAC 59.176 43.478 0.00 0.00 36.37 2.50
277 285 4.565166 GGTCATCGACGAAAACACATATGA 59.435 41.667 10.38 0.00 32.65 2.15
300 308 1.202154 GGAGACGTCGATGTGTAGGTG 60.202 57.143 16.54 0.00 0.00 4.00
340 349 4.646945 ACAGTCGAGTCATATGGAAGACAT 59.353 41.667 17.23 0.00 43.68 3.06
363 372 4.748102 AGAAACTATCGTTCTTGCGACAAA 59.252 37.500 0.00 0.00 43.99 2.83
364 373 4.304110 AGAAACTATCGTTCTTGCGACAA 58.696 39.130 0.00 0.00 43.99 3.18
366 375 4.167268 AGAGAAACTATCGTTCTTGCGAC 58.833 43.478 0.00 0.00 43.99 5.19
371 380 7.324178 AGCATGTTAGAGAAACTATCGTTCTT 58.676 34.615 0.00 0.00 38.99 2.52
420 429 1.002134 ATGTGCGAAGTGGGGAAGG 60.002 57.895 0.00 0.00 0.00 3.46
427 436 1.012086 CTGGATCCATGTGCGAAGTG 58.988 55.000 16.63 0.00 0.00 3.16
428 437 0.904649 TCTGGATCCATGTGCGAAGT 59.095 50.000 16.63 0.00 0.00 3.01
435 444 0.318441 CGCCGTATCTGGATCCATGT 59.682 55.000 16.63 9.57 0.00 3.21
536 547 2.223994 TGTTACGTTTCGATGGACACCA 60.224 45.455 0.00 0.00 38.19 4.17
585 596 6.716173 GGGAACACTGTTTAACTACCCAATAA 59.284 38.462 8.57 0.00 35.41 1.40
591 603 3.992427 CTCGGGAACACTGTTTAACTACC 59.008 47.826 0.00 0.00 0.00 3.18
608 620 1.377333 GGTTTGAAGGAGGCTCGGG 60.377 63.158 8.69 0.00 0.00 5.14
634 646 1.027357 ATCTGAATTGGTGCGGATGC 58.973 50.000 0.00 0.00 43.20 3.91
650 662 3.524095 TGTGTTTGGGTGATGGAATCT 57.476 42.857 0.00 0.00 45.81 2.40
658 670 5.761234 GTCTATGTAAGTTGTGTTTGGGTGA 59.239 40.000 0.00 0.00 0.00 4.02
715 728 2.235650 GTTAACCTCGCCTACCTTTCCT 59.764 50.000 0.00 0.00 0.00 3.36
758 776 0.878523 AGCACGCACACGCTTCTTAA 60.879 50.000 0.00 0.00 45.53 1.85
759 777 1.282248 GAGCACGCACACGCTTCTTA 61.282 55.000 0.00 0.00 45.53 2.10
784 802 0.034337 GACCACCCAACGCTCAGTAA 59.966 55.000 0.00 0.00 0.00 2.24
787 805 2.738521 CGACCACCCAACGCTCAG 60.739 66.667 0.00 0.00 0.00 3.35
789 807 3.524648 TTCCGACCACCCAACGCTC 62.525 63.158 0.00 0.00 0.00 5.03
826 847 2.496817 CTCACTGCCTACCTCGCC 59.503 66.667 0.00 0.00 0.00 5.54
827 848 2.202810 GCTCACTGCCTACCTCGC 60.203 66.667 0.00 0.00 35.15 5.03
851 872 1.377856 GGGGAGAAGAAGTGGCTGC 60.378 63.158 0.00 0.00 0.00 5.25
852 873 1.204113 AGGGGGAGAAGAAGTGGCTG 61.204 60.000 0.00 0.00 0.00 4.85
853 874 0.912006 GAGGGGGAGAAGAAGTGGCT 60.912 60.000 0.00 0.00 0.00 4.75
854 875 1.604915 GAGGGGGAGAAGAAGTGGC 59.395 63.158 0.00 0.00 0.00 5.01
855 876 1.617947 CGGAGGGGGAGAAGAAGTGG 61.618 65.000 0.00 0.00 0.00 4.00
856 877 1.901085 CGGAGGGGGAGAAGAAGTG 59.099 63.158 0.00 0.00 0.00 3.16
857 878 1.990614 GCGGAGGGGGAGAAGAAGT 60.991 63.158 0.00 0.00 0.00 3.01
858 879 1.268283 AAGCGGAGGGGGAGAAGAAG 61.268 60.000 0.00 0.00 0.00 2.85
859 880 0.042131 TAAGCGGAGGGGGAGAAGAA 59.958 55.000 0.00 0.00 0.00 2.52
860 881 0.686769 GTAAGCGGAGGGGGAGAAGA 60.687 60.000 0.00 0.00 0.00 2.87
861 882 1.687297 GGTAAGCGGAGGGGGAGAAG 61.687 65.000 0.00 0.00 0.00 2.85
862 883 1.688187 GGTAAGCGGAGGGGGAGAA 60.688 63.158 0.00 0.00 0.00 2.87
863 884 2.042230 GGTAAGCGGAGGGGGAGA 60.042 66.667 0.00 0.00 0.00 3.71
864 885 3.162154 GGGTAAGCGGAGGGGGAG 61.162 72.222 0.00 0.00 0.00 4.30
988 1012 2.838467 CCATCATCCCTCCCTGGCC 61.838 68.421 0.00 0.00 0.00 5.36
990 1014 0.104777 TCTCCATCATCCCTCCCTGG 60.105 60.000 0.00 0.00 0.00 4.45
991 1015 1.350071 CTCTCCATCATCCCTCCCTG 58.650 60.000 0.00 0.00 0.00 4.45
995 1019 0.686224 CTGGCTCTCCATCATCCCTC 59.314 60.000 0.00 0.00 42.51 4.30
1130 1170 4.175337 CCCATCCCACACGCCGAT 62.175 66.667 0.00 0.00 0.00 4.18
1183 1223 4.458829 AGGATCCAGCCGTCCGGA 62.459 66.667 15.82 0.00 39.54 5.14
1364 1411 2.669569 ACGCAATGAGCTGCCGTT 60.670 55.556 0.00 0.00 42.61 4.44
1365 1412 3.121030 GACGCAATGAGCTGCCGT 61.121 61.111 0.00 0.00 42.61 5.68
1366 1413 2.806856 GAGACGCAATGAGCTGCCG 61.807 63.158 0.00 0.00 42.61 5.69
1409 1456 3.611433 GCATCAGCGACAATTGACC 57.389 52.632 13.59 2.50 0.00 4.02
1421 1468 2.027745 ACCACCAGTGAGTAAGCATCAG 60.028 50.000 0.00 0.00 0.00 2.90
1434 1481 1.143684 ACAGAAAGCATCACCACCAGT 59.856 47.619 0.00 0.00 0.00 4.00
1435 1482 1.901591 ACAGAAAGCATCACCACCAG 58.098 50.000 0.00 0.00 0.00 4.00
1436 1483 1.955778 CAACAGAAAGCATCACCACCA 59.044 47.619 0.00 0.00 0.00 4.17
1437 1484 1.270550 CCAACAGAAAGCATCACCACC 59.729 52.381 0.00 0.00 0.00 4.61
1438 1485 1.336240 GCCAACAGAAAGCATCACCAC 60.336 52.381 0.00 0.00 0.00 4.16
1439 1486 0.961019 GCCAACAGAAAGCATCACCA 59.039 50.000 0.00 0.00 0.00 4.17
1477 1524 2.027625 GGTCCGCGTGAACTCCTTG 61.028 63.158 4.92 0.00 0.00 3.61
1552 1599 1.104630 CGAGGTAGTTGAGGGAGGAC 58.895 60.000 0.00 0.00 0.00 3.85
1594 1641 7.597369 TCAAAATTCAGAGATGCAATTCAGTTG 59.403 33.333 0.00 0.00 40.90 3.16
1597 1644 8.595533 CAATCAAAATTCAGAGATGCAATTCAG 58.404 33.333 0.00 0.00 0.00 3.02
1606 1663 9.909644 CTTTGAAGACAATCAAAATTCAGAGAT 57.090 29.630 4.29 0.00 45.75 2.75
1620 1677 4.454678 TCAGCTGACACTTTGAAGACAAT 58.545 39.130 13.74 0.00 35.85 2.71
1622 1679 3.541996 TCAGCTGACACTTTGAAGACA 57.458 42.857 13.74 0.00 0.00 3.41
1624 1681 5.277490 CGAAATTCAGCTGACACTTTGAAGA 60.277 40.000 18.03 0.00 33.53 2.87
1625 1682 4.908156 CGAAATTCAGCTGACACTTTGAAG 59.092 41.667 18.03 6.85 33.53 3.02
1636 1693 4.450419 ACTTTCAGAGACGAAATTCAGCTG 59.550 41.667 7.63 7.63 34.50 4.24
1662 1719 1.211703 TGTCCTGCCAAGACACAGAAA 59.788 47.619 0.00 0.00 39.29 2.52
1665 1722 1.901591 ATTGTCCTGCCAAGACACAG 58.098 50.000 0.00 0.00 43.70 3.66
1674 1731 1.632589 ACAAAGGGAATTGTCCTGCC 58.367 50.000 0.00 0.00 44.28 4.85
1675 1732 3.131046 CCATACAAAGGGAATTGTCCTGC 59.869 47.826 0.00 0.00 44.28 4.85
1709 1766 0.451783 CTTGCTCAATGTAACCGGCC 59.548 55.000 0.00 0.00 0.00 6.13
1773 1830 4.270325 GCCGTGATGGAGTAGTAATTGAAC 59.730 45.833 0.00 0.00 42.00 3.18
1793 1851 3.313526 CAGAGGTTTCCATTTCATAGCCG 59.686 47.826 0.00 0.00 0.00 5.52
1797 1855 5.488919 AGGAGTCAGAGGTTTCCATTTCATA 59.511 40.000 0.00 0.00 32.02 2.15
1811 1869 2.451490 TGGCTACTTGAGGAGTCAGAG 58.549 52.381 0.00 0.00 39.86 3.35
1813 1871 2.102252 GGATGGCTACTTGAGGAGTCAG 59.898 54.545 3.65 0.00 39.86 3.51
1814 1872 2.111384 GGATGGCTACTTGAGGAGTCA 58.889 52.381 0.00 0.00 39.86 3.41
1815 1873 2.111384 TGGATGGCTACTTGAGGAGTC 58.889 52.381 0.00 0.00 39.86 3.36
1818 1876 5.708736 TTAATTGGATGGCTACTTGAGGA 57.291 39.130 0.00 0.00 0.00 3.71
1819 1877 6.966534 ATTTAATTGGATGGCTACTTGAGG 57.033 37.500 0.00 0.00 0.00 3.86
1823 1881 7.732222 TTGGAATTTAATTGGATGGCTACTT 57.268 32.000 0.00 0.00 0.00 2.24
1824 1882 7.732222 TTTGGAATTTAATTGGATGGCTACT 57.268 32.000 0.00 0.00 0.00 2.57
1827 1885 9.617523 CTTTATTTGGAATTTAATTGGATGGCT 57.382 29.630 0.00 0.00 0.00 4.75
1828 1886 9.612066 TCTTTATTTGGAATTTAATTGGATGGC 57.388 29.630 0.00 0.00 0.00 4.40
1840 1899 7.038088 AGCTCCAATGGTTCTTTATTTGGAATT 60.038 33.333 0.00 0.00 0.00 2.17
1862 1921 3.442977 AGTCATGCATTTTCCTTCAGCTC 59.557 43.478 0.00 0.00 0.00 4.09
1864 1923 3.863142 AGTCATGCATTTTCCTTCAGC 57.137 42.857 0.00 0.00 0.00 4.26
1866 1925 5.787953 TCAAAGTCATGCATTTTCCTTCA 57.212 34.783 0.00 0.00 0.00 3.02
1867 1926 6.925165 TCTTTCAAAGTCATGCATTTTCCTTC 59.075 34.615 0.00 0.00 0.00 3.46
1868 1927 6.819284 TCTTTCAAAGTCATGCATTTTCCTT 58.181 32.000 0.00 0.00 0.00 3.36
1869 1928 6.409524 TCTTTCAAAGTCATGCATTTTCCT 57.590 33.333 0.00 0.00 0.00 3.36
1870 1929 7.662604 ATTCTTTCAAAGTCATGCATTTTCC 57.337 32.000 0.00 0.00 0.00 3.13
1871 1930 9.377383 CAAATTCTTTCAAAGTCATGCATTTTC 57.623 29.630 0.00 0.00 0.00 2.29
1872 1931 8.895737 ACAAATTCTTTCAAAGTCATGCATTTT 58.104 25.926 0.00 0.00 0.00 1.82
1873 1932 8.441312 ACAAATTCTTTCAAAGTCATGCATTT 57.559 26.923 0.00 0.00 0.00 2.32
1874 1933 7.711772 TGACAAATTCTTTCAAAGTCATGCATT 59.288 29.630 0.00 0.00 30.43 3.56
1875 1934 7.211573 TGACAAATTCTTTCAAAGTCATGCAT 58.788 30.769 0.00 0.00 30.43 3.96
1876 1935 6.571605 TGACAAATTCTTTCAAAGTCATGCA 58.428 32.000 0.00 0.00 30.43 3.96
1877 1936 6.919662 TCTGACAAATTCTTTCAAAGTCATGC 59.080 34.615 0.00 0.00 34.47 4.06
1878 1937 7.916977 TGTCTGACAAATTCTTTCAAAGTCATG 59.083 33.333 8.27 0.00 34.47 3.07
1879 1938 7.999679 TGTCTGACAAATTCTTTCAAAGTCAT 58.000 30.769 8.27 0.00 34.47 3.06
1880 1939 7.389803 TGTCTGACAAATTCTTTCAAAGTCA 57.610 32.000 8.27 0.00 33.92 3.41
1881 1940 8.131100 TGATGTCTGACAAATTCTTTCAAAGTC 58.869 33.333 15.31 3.20 0.00 3.01
1882 1941 7.917505 GTGATGTCTGACAAATTCTTTCAAAGT 59.082 33.333 15.31 0.00 0.00 2.66
1883 1942 8.133627 AGTGATGTCTGACAAATTCTTTCAAAG 58.866 33.333 15.31 0.00 0.00 2.77
1884 1943 7.999679 AGTGATGTCTGACAAATTCTTTCAAA 58.000 30.769 15.31 0.00 0.00 2.69
1892 1951 9.429359 CTACTCTAAAGTGATGTCTGACAAATT 57.571 33.333 15.31 1.89 36.92 1.82
1895 1954 6.015434 TGCTACTCTAAAGTGATGTCTGACAA 60.015 38.462 15.31 0.00 36.92 3.18
1896 1955 5.476945 TGCTACTCTAAAGTGATGTCTGACA 59.523 40.000 13.60 13.60 36.92 3.58
1902 1961 9.539825 CTGAATTATGCTACTCTAAAGTGATGT 57.460 33.333 0.00 0.00 36.92 3.06
1948 2059 3.131046 CACACAAAGGCTGTTCCTCTTTT 59.869 43.478 0.00 0.00 46.94 2.27
1954 2065 2.024414 AGAACACACAAAGGCTGTTCC 58.976 47.619 10.36 0.00 43.21 3.62
1955 2066 2.796032 GCAGAACACACAAAGGCTGTTC 60.796 50.000 6.88 6.88 42.74 3.18
1956 2067 1.134946 GCAGAACACACAAAGGCTGTT 59.865 47.619 0.00 0.00 35.47 3.16
1998 2118 4.929211 CCAATAGCCTACAAAACCAAAAGC 59.071 41.667 0.00 0.00 0.00 3.51
1999 2119 4.929211 GCCAATAGCCTACAAAACCAAAAG 59.071 41.667 0.00 0.00 34.35 2.27
2005 2125 4.380550 GGAACTGCCAATAGCCTACAAAAC 60.381 45.833 0.00 0.00 42.71 2.43
2055 2175 1.450312 GCCCCAGACTGGTTCGATG 60.450 63.158 20.24 3.57 35.17 3.84
2249 2401 1.382522 CACAAATGGAGCCGCTATGT 58.617 50.000 0.00 0.00 0.00 2.29
2347 2499 4.695455 ACGTCATTTTCAGGGACAATAGTG 59.305 41.667 0.00 0.00 0.00 2.74
2357 2509 1.136252 CAGCGTCACGTCATTTTCAGG 60.136 52.381 0.00 0.00 0.00 3.86
2398 2550 3.467803 GGTTAGCTAGCTGGTGGTTATG 58.532 50.000 27.68 0.00 0.00 1.90
2420 2572 3.066369 CTGCACAGCATGAAATAGCAG 57.934 47.619 0.00 5.05 39.69 4.24
2427 2579 1.530720 CGTTACACTGCACAGCATGAA 59.469 47.619 0.00 0.00 39.69 2.57
2504 2656 0.315251 GGAGCTCAAGGTTTGGCAAC 59.685 55.000 17.19 0.00 31.84 4.17
2585 2737 7.376615 ACAGTATAATTACCGCCTTAGACATC 58.623 38.462 0.00 0.00 0.00 3.06
2625 2777 8.349245 CCACATCAACAAACTTATAACTTGTCA 58.651 33.333 8.10 1.54 32.21 3.58
2899 3064 6.398918 ACAGACTTTGCCAGTGTAGTATAAG 58.601 40.000 0.00 0.00 35.01 1.73
2928 3130 3.685139 TTAGTTCAGAAGCTGGGTCAG 57.315 47.619 0.00 0.00 31.51 3.51
2998 3207 0.320421 ACAACATCCGGTCGAACAGG 60.320 55.000 0.00 2.81 34.60 4.00
3097 3306 7.226523 GTGGATTCATGTATACTGTGTTATGCA 59.773 37.037 4.17 9.43 0.00 3.96
3101 3310 9.508642 TTTTGTGGATTCATGTATACTGTGTTA 57.491 29.630 4.17 0.00 0.00 2.41
3138 3347 5.947228 TGATTTCGAGTTTTCAGCTTCAT 57.053 34.783 0.00 0.00 0.00 2.57
3194 3403 3.089284 TGGTGAGAATAGAGCTCGTGAA 58.911 45.455 8.37 0.00 35.15 3.18
3205 3414 2.421952 GCTCCCTGCAATGGTGAGAATA 60.422 50.000 12.00 0.00 42.31 1.75
3207 3416 0.322816 GCTCCCTGCAATGGTGAGAA 60.323 55.000 12.00 0.00 42.31 2.87
3313 3525 1.674817 CGACGTAGCACAGGGGAAAAT 60.675 52.381 0.00 0.00 0.00 1.82
3334 3546 2.202878 CGACCGTGGCCACTATGG 60.203 66.667 32.28 27.06 41.55 2.74
3382 3594 3.209410 GAATATGCTCCCCAGAACACAG 58.791 50.000 0.00 0.00 0.00 3.66
3638 3851 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
3639 3852 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
3640 3853 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
3641 3854 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
3642 3855 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
3643 3856 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
3644 3857 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
3645 3858 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
3646 3859 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
3647 3860 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
3648 3861 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
3654 3867 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
3655 3868 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
3656 3869 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
3657 3870 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
3658 3871 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
3659 3872 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
3660 3873 6.579491 ACTACACTAGTGTCAAAAACGTTC 57.421 37.500 31.11 0.00 43.74 3.95
3673 3886 6.827727 AGGACATTTTTGACACTACACTAGT 58.172 36.000 0.00 0.00 40.28 2.57
3674 3887 7.730364 AAGGACATTTTTGACACTACACTAG 57.270 36.000 0.00 0.00 0.00 2.57
3676 3889 9.959721 ATATAAGGACATTTTTGACACTACACT 57.040 29.630 0.00 0.00 0.00 3.55
3682 3895 9.965824 CCCATAATATAAGGACATTTTTGACAC 57.034 33.333 0.00 0.00 0.00 3.67
3683 3896 9.928618 TCCCATAATATAAGGACATTTTTGACA 57.071 29.630 0.00 0.00 0.00 3.58
3694 3907 6.183361 ACTCCCTCTGTCCCATAATATAAGGA 60.183 42.308 0.00 0.00 0.00 3.36
3695 3908 6.026186 ACTCCCTCTGTCCCATAATATAAGG 58.974 44.000 0.00 0.00 0.00 2.69
3696 3909 7.147811 GCTACTCCCTCTGTCCCATAATATAAG 60.148 44.444 0.00 0.00 0.00 1.73
3697 3910 6.668283 GCTACTCCCTCTGTCCCATAATATAA 59.332 42.308 0.00 0.00 0.00 0.98
3698 3911 6.010650 AGCTACTCCCTCTGTCCCATAATATA 60.011 42.308 0.00 0.00 0.00 0.86
3699 3912 5.026790 GCTACTCCCTCTGTCCCATAATAT 58.973 45.833 0.00 0.00 0.00 1.28
3700 3913 4.108124 AGCTACTCCCTCTGTCCCATAATA 59.892 45.833 0.00 0.00 0.00 0.98
3701 3914 3.116551 AGCTACTCCCTCTGTCCCATAAT 60.117 47.826 0.00 0.00 0.00 1.28
3702 3915 2.247635 AGCTACTCCCTCTGTCCCATAA 59.752 50.000 0.00 0.00 0.00 1.90
3703 3916 1.860240 AGCTACTCCCTCTGTCCCATA 59.140 52.381 0.00 0.00 0.00 2.74
3704 3917 0.639392 AGCTACTCCCTCTGTCCCAT 59.361 55.000 0.00 0.00 0.00 4.00
3705 3918 0.413832 AAGCTACTCCCTCTGTCCCA 59.586 55.000 0.00 0.00 0.00 4.37
3706 3919 0.827368 CAAGCTACTCCCTCTGTCCC 59.173 60.000 0.00 0.00 0.00 4.46
3707 3920 0.827368 CCAAGCTACTCCCTCTGTCC 59.173 60.000 0.00 0.00 0.00 4.02
3708 3921 1.853963 TCCAAGCTACTCCCTCTGTC 58.146 55.000 0.00 0.00 0.00 3.51
3709 3922 2.114616 CATCCAAGCTACTCCCTCTGT 58.885 52.381 0.00 0.00 0.00 3.41
3710 3923 1.415659 CCATCCAAGCTACTCCCTCTG 59.584 57.143 0.00 0.00 0.00 3.35
3711 3924 1.292242 TCCATCCAAGCTACTCCCTCT 59.708 52.381 0.00 0.00 0.00 3.69
3712 3925 1.414550 GTCCATCCAAGCTACTCCCTC 59.585 57.143 0.00 0.00 0.00 4.30
3713 3926 1.273838 TGTCCATCCAAGCTACTCCCT 60.274 52.381 0.00 0.00 0.00 4.20
3714 3927 1.139853 CTGTCCATCCAAGCTACTCCC 59.860 57.143 0.00 0.00 0.00 4.30
3715 3928 1.139853 CCTGTCCATCCAAGCTACTCC 59.860 57.143 0.00 0.00 0.00 3.85
3716 3929 1.474143 GCCTGTCCATCCAAGCTACTC 60.474 57.143 0.00 0.00 0.00 2.59
3717 3930 0.543749 GCCTGTCCATCCAAGCTACT 59.456 55.000 0.00 0.00 0.00 2.57
3787 4161 8.600668 TCTGCCAATATCTTTAGAGCAATAGAT 58.399 33.333 0.00 0.00 0.00 1.98
3972 4355 9.672086 GAGCAGACTATACACAATAAGTAAGAG 57.328 37.037 0.00 0.00 0.00 2.85
3991 4374 6.851222 TTATAAAGCAAGCTATGAGCAGAC 57.149 37.500 0.64 0.00 45.56 3.51
4001 4384 4.274459 CCGCTTCAGATTATAAAGCAAGCT 59.726 41.667 14.72 0.00 44.39 3.74
4002 4385 4.531332 CCGCTTCAGATTATAAAGCAAGC 58.469 43.478 7.06 8.53 44.39 4.01
4003 4386 4.023707 CCCCGCTTCAGATTATAAAGCAAG 60.024 45.833 7.06 1.32 44.39 4.01
4004 4387 3.882888 CCCCGCTTCAGATTATAAAGCAA 59.117 43.478 7.06 0.00 44.39 3.91
4005 4388 3.476552 CCCCGCTTCAGATTATAAAGCA 58.523 45.455 7.06 0.00 44.39 3.91
4006 4389 2.814336 CCCCCGCTTCAGATTATAAAGC 59.186 50.000 0.00 0.00 41.51 3.51
4007 4390 4.351874 TCCCCCGCTTCAGATTATAAAG 57.648 45.455 0.00 0.00 0.00 1.85
4008 4391 4.781775 TTCCCCCGCTTCAGATTATAAA 57.218 40.909 0.00 0.00 0.00 1.40
4009 4392 4.457466 GTTTCCCCCGCTTCAGATTATAA 58.543 43.478 0.00 0.00 0.00 0.98
4010 4393 3.181448 GGTTTCCCCCGCTTCAGATTATA 60.181 47.826 0.00 0.00 0.00 0.98
4011 4394 2.422945 GGTTTCCCCCGCTTCAGATTAT 60.423 50.000 0.00 0.00 0.00 1.28
4012 4395 1.064979 GGTTTCCCCCGCTTCAGATTA 60.065 52.381 0.00 0.00 0.00 1.75
4013 4396 0.323451 GGTTTCCCCCGCTTCAGATT 60.323 55.000 0.00 0.00 0.00 2.40
4014 4397 1.303282 GGTTTCCCCCGCTTCAGAT 59.697 57.895 0.00 0.00 0.00 2.90
4015 4398 2.754375 GGTTTCCCCCGCTTCAGA 59.246 61.111 0.00 0.00 0.00 3.27
4016 4399 2.361230 GGGTTTCCCCCGCTTCAG 60.361 66.667 0.00 0.00 45.80 3.02
4039 4422 7.870509 AGCTATGAGCAGAATATGACAAAAA 57.129 32.000 0.64 0.00 45.56 1.94
4040 4423 7.680350 GCAAGCTATGAGCAGAATATGACAAAA 60.680 37.037 0.64 0.00 45.56 2.44
4041 4424 6.238566 GCAAGCTATGAGCAGAATATGACAAA 60.239 38.462 0.64 0.00 45.56 2.83
4042 4425 5.237996 GCAAGCTATGAGCAGAATATGACAA 59.762 40.000 0.64 0.00 45.56 3.18
4043 4426 4.753610 GCAAGCTATGAGCAGAATATGACA 59.246 41.667 0.64 0.00 45.56 3.58
4044 4427 4.996122 AGCAAGCTATGAGCAGAATATGAC 59.004 41.667 0.64 0.00 45.56 3.06
4045 4428 5.224821 AGCAAGCTATGAGCAGAATATGA 57.775 39.130 0.64 0.00 45.56 2.15
4046 4429 5.943706 AAGCAAGCTATGAGCAGAATATG 57.056 39.130 0.64 0.00 45.56 1.78
4047 4430 9.730705 TTATAAAGCAAGCTATGAGCAGAATAT 57.269 29.630 0.64 0.00 45.56 1.28
4048 4431 9.730705 ATTATAAAGCAAGCTATGAGCAGAATA 57.269 29.630 0.64 0.00 45.56 1.75
4049 4432 8.632906 ATTATAAAGCAAGCTATGAGCAGAAT 57.367 30.769 0.64 0.00 45.56 2.40
4050 4433 7.935755 AGATTATAAAGCAAGCTATGAGCAGAA 59.064 33.333 0.64 0.00 45.56 3.02
4051 4434 7.387122 CAGATTATAAAGCAAGCTATGAGCAGA 59.613 37.037 0.64 0.00 45.56 4.26
4052 4435 7.387122 TCAGATTATAAAGCAAGCTATGAGCAG 59.613 37.037 0.64 0.00 45.56 4.24
4053 4436 7.219322 TCAGATTATAAAGCAAGCTATGAGCA 58.781 34.615 0.64 0.00 45.56 4.26
4054 4437 7.664082 TCAGATTATAAAGCAAGCTATGAGC 57.336 36.000 0.00 0.00 42.84 4.26
4055 4438 8.229137 GCTTCAGATTATAAAGCAAGCTATGAG 58.771 37.037 11.64 0.00 43.77 2.90
4056 4439 7.095481 CGCTTCAGATTATAAAGCAAGCTATGA 60.095 37.037 14.72 0.00 44.39 2.15
4057 4440 7.014115 CGCTTCAGATTATAAAGCAAGCTATG 58.986 38.462 14.72 0.00 44.39 2.23
4058 4441 6.148480 CCGCTTCAGATTATAAAGCAAGCTAT 59.852 38.462 14.72 0.00 44.39 2.97
4059 4442 5.466728 CCGCTTCAGATTATAAAGCAAGCTA 59.533 40.000 14.72 0.00 44.39 3.32
4060 4443 4.274459 CCGCTTCAGATTATAAAGCAAGCT 59.726 41.667 14.72 0.00 44.39 3.74
4061 4444 4.531332 CCGCTTCAGATTATAAAGCAAGC 58.469 43.478 7.06 8.53 44.39 4.01
4062 4445 4.023707 CCCCGCTTCAGATTATAAAGCAAG 60.024 45.833 7.06 1.32 44.39 4.01
4063 4446 3.882888 CCCCGCTTCAGATTATAAAGCAA 59.117 43.478 7.06 0.00 44.39 3.91
4064 4447 3.476552 CCCCGCTTCAGATTATAAAGCA 58.523 45.455 7.06 0.00 44.39 3.91
4065 4448 2.814336 CCCCCGCTTCAGATTATAAAGC 59.186 50.000 0.00 0.00 41.51 3.51
4066 4449 4.351874 TCCCCCGCTTCAGATTATAAAG 57.648 45.455 0.00 0.00 0.00 1.85
4067 4450 4.781775 TTCCCCCGCTTCAGATTATAAA 57.218 40.909 0.00 0.00 0.00 1.40
4068 4451 4.457466 GTTTCCCCCGCTTCAGATTATAA 58.543 43.478 0.00 0.00 0.00 0.98
4069 4452 3.181448 GGTTTCCCCCGCTTCAGATTATA 60.181 47.826 0.00 0.00 0.00 0.98
4070 4453 2.422945 GGTTTCCCCCGCTTCAGATTAT 60.423 50.000 0.00 0.00 0.00 1.28
4071 4454 1.064979 GGTTTCCCCCGCTTCAGATTA 60.065 52.381 0.00 0.00 0.00 1.75
4072 4455 0.323451 GGTTTCCCCCGCTTCAGATT 60.323 55.000 0.00 0.00 0.00 2.40
4073 4456 1.303282 GGTTTCCCCCGCTTCAGAT 59.697 57.895 0.00 0.00 0.00 2.90
4074 4457 2.754375 GGTTTCCCCCGCTTCAGA 59.246 61.111 0.00 0.00 0.00 3.27
4075 4458 2.361230 GGGTTTCCCCCGCTTCAG 60.361 66.667 0.00 0.00 45.80 3.02
4103 4486 9.212641 GCTTTTGATACTATGAGCAGAATATGA 57.787 33.333 0.00 0.00 0.00 2.15
4104 4487 9.217278 AGCTTTTGATACTATGAGCAGAATATG 57.783 33.333 0.00 0.00 32.78 1.78
4148 4531 0.319405 GTGGGCTCAGCTGCATTTTT 59.681 50.000 9.47 0.00 34.04 1.94
4149 4532 1.870055 CGTGGGCTCAGCTGCATTTT 61.870 55.000 9.47 0.00 34.04 1.82
4150 4533 2.338015 CGTGGGCTCAGCTGCATTT 61.338 57.895 9.47 0.00 34.04 2.32
4151 4534 2.749044 CGTGGGCTCAGCTGCATT 60.749 61.111 9.47 0.00 34.04 3.56
4152 4535 2.547640 ATTCGTGGGCTCAGCTGCAT 62.548 55.000 9.47 0.00 34.04 3.96
4153 4536 3.258228 ATTCGTGGGCTCAGCTGCA 62.258 57.895 9.47 0.00 34.04 4.41
4154 4537 2.437359 ATTCGTGGGCTCAGCTGC 60.437 61.111 9.47 0.00 0.00 5.25
4155 4538 0.674581 TTCATTCGTGGGCTCAGCTG 60.675 55.000 7.63 7.63 0.00 4.24
4156 4539 0.254178 ATTCATTCGTGGGCTCAGCT 59.746 50.000 0.00 0.00 0.00 4.24
4157 4540 1.953559 TATTCATTCGTGGGCTCAGC 58.046 50.000 0.00 0.00 0.00 4.26
4158 4541 5.300752 ACTAATATTCATTCGTGGGCTCAG 58.699 41.667 0.00 0.00 0.00 3.35
4159 4542 5.290493 ACTAATATTCATTCGTGGGCTCA 57.710 39.130 0.00 0.00 0.00 4.26
4160 4543 4.691216 GGACTAATATTCATTCGTGGGCTC 59.309 45.833 0.00 0.00 0.00 4.70
4161 4544 4.102524 TGGACTAATATTCATTCGTGGGCT 59.897 41.667 0.00 0.00 0.00 5.19
4162 4545 4.213482 GTGGACTAATATTCATTCGTGGGC 59.787 45.833 0.00 0.00 0.00 5.36
4163 4546 5.466728 CAGTGGACTAATATTCATTCGTGGG 59.533 44.000 0.00 0.00 0.00 4.61
4164 4547 5.050091 GCAGTGGACTAATATTCATTCGTGG 60.050 44.000 0.00 0.00 0.00 4.94
4165 4548 5.523552 TGCAGTGGACTAATATTCATTCGTG 59.476 40.000 0.00 0.00 0.00 4.35
4166 4549 5.670485 TGCAGTGGACTAATATTCATTCGT 58.330 37.500 0.00 0.00 0.00 3.85
4167 4550 6.603237 TTGCAGTGGACTAATATTCATTCG 57.397 37.500 0.00 0.00 0.00 3.34
4168 4551 6.860023 GCATTGCAGTGGACTAATATTCATTC 59.140 38.462 11.53 0.00 0.00 2.67
4169 4552 6.239120 GGCATTGCAGTGGACTAATATTCATT 60.239 38.462 11.53 0.00 0.00 2.57
4170 4553 5.242393 GGCATTGCAGTGGACTAATATTCAT 59.758 40.000 11.53 0.00 0.00 2.57
4171 4554 4.580167 GGCATTGCAGTGGACTAATATTCA 59.420 41.667 11.53 0.00 0.00 2.57
4172 4555 4.319766 CGGCATTGCAGTGGACTAATATTC 60.320 45.833 11.53 0.00 0.00 1.75
4173 4556 3.565482 CGGCATTGCAGTGGACTAATATT 59.435 43.478 11.53 0.00 0.00 1.28
4174 4557 3.141398 CGGCATTGCAGTGGACTAATAT 58.859 45.455 11.53 0.00 0.00 1.28
4175 4558 2.169561 TCGGCATTGCAGTGGACTAATA 59.830 45.455 11.53 0.00 0.00 0.98
4176 4559 1.065491 TCGGCATTGCAGTGGACTAAT 60.065 47.619 11.53 0.00 0.00 1.73
4177 4560 0.323302 TCGGCATTGCAGTGGACTAA 59.677 50.000 11.53 0.00 0.00 2.24
4178 4561 0.323302 TTCGGCATTGCAGTGGACTA 59.677 50.000 11.53 0.00 0.00 2.59
4179 4562 1.073025 TTCGGCATTGCAGTGGACT 59.927 52.632 11.53 0.00 0.00 3.85
4180 4563 1.210155 GTTCGGCATTGCAGTGGAC 59.790 57.895 11.53 0.80 0.00 4.02
4181 4564 1.228094 TGTTCGGCATTGCAGTGGA 60.228 52.632 11.53 0.00 0.00 4.02
4182 4565 1.210931 CTGTTCGGCATTGCAGTGG 59.789 57.895 11.53 0.00 0.00 4.00
4183 4566 0.311790 AACTGTTCGGCATTGCAGTG 59.688 50.000 11.39 4.57 40.79 3.66
4184 4567 0.593128 GAACTGTTCGGCATTGCAGT 59.407 50.000 11.39 1.75 43.13 4.40
4185 4568 0.109597 GGAACTGTTCGGCATTGCAG 60.110 55.000 13.89 6.72 35.31 4.41
4186 4569 0.821301 TGGAACTGTTCGGCATTGCA 60.821 50.000 13.89 2.35 0.00 4.08
4187 4570 0.527565 ATGGAACTGTTCGGCATTGC 59.472 50.000 13.89 0.00 0.00 3.56
4188 4571 3.302365 AAATGGAACTGTTCGGCATTG 57.698 42.857 19.04 0.00 0.00 2.82
4189 4572 5.461032 TTTAAATGGAACTGTTCGGCATT 57.539 34.783 13.89 14.56 0.00 3.56
4190 4573 5.461032 TTTTAAATGGAACTGTTCGGCAT 57.539 34.783 13.89 9.85 0.00 4.40
4191 4574 4.920640 TTTTAAATGGAACTGTTCGGCA 57.079 36.364 13.89 8.01 0.00 5.69
4192 4575 8.474006 AATATTTTTAAATGGAACTGTTCGGC 57.526 30.769 13.89 2.51 0.00 5.54
4193 4576 9.855021 AGAATATTTTTAAATGGAACTGTTCGG 57.145 29.630 13.89 0.00 0.00 4.30
4201 4584 9.364989 CCGAGCAAAGAATATTTTTAAATGGAA 57.635 29.630 0.00 0.00 0.00 3.53
4202 4585 7.978975 CCCGAGCAAAGAATATTTTTAAATGGA 59.021 33.333 0.00 0.00 0.00 3.41
4203 4586 7.763985 ACCCGAGCAAAGAATATTTTTAAATGG 59.236 33.333 0.00 0.00 0.00 3.16
4204 4587 8.594687 CACCCGAGCAAAGAATATTTTTAAATG 58.405 33.333 0.00 0.00 0.00 2.32
4205 4588 7.763985 CCACCCGAGCAAAGAATATTTTTAAAT 59.236 33.333 0.00 0.00 0.00 1.40
4206 4589 7.039644 TCCACCCGAGCAAAGAATATTTTTAAA 60.040 33.333 0.00 0.00 0.00 1.52
4207 4590 6.434652 TCCACCCGAGCAAAGAATATTTTTAA 59.565 34.615 0.00 0.00 0.00 1.52
4208 4591 5.946972 TCCACCCGAGCAAAGAATATTTTTA 59.053 36.000 0.00 0.00 0.00 1.52
4209 4592 4.770010 TCCACCCGAGCAAAGAATATTTTT 59.230 37.500 0.00 0.00 0.00 1.94
4210 4593 4.340617 TCCACCCGAGCAAAGAATATTTT 58.659 39.130 0.00 0.00 0.00 1.82
4211 4594 3.963129 TCCACCCGAGCAAAGAATATTT 58.037 40.909 0.00 0.00 0.00 1.40
4212 4595 3.644966 TCCACCCGAGCAAAGAATATT 57.355 42.857 0.00 0.00 0.00 1.28
4213 4596 3.644966 TTCCACCCGAGCAAAGAATAT 57.355 42.857 0.00 0.00 0.00 1.28
4214 4597 3.426787 TTTCCACCCGAGCAAAGAATA 57.573 42.857 0.00 0.00 0.00 1.75
4215 4598 2.286365 TTTCCACCCGAGCAAAGAAT 57.714 45.000 0.00 0.00 0.00 2.40
4216 4599 2.286365 ATTTCCACCCGAGCAAAGAA 57.714 45.000 0.00 0.00 0.00 2.52
4217 4600 2.286365 AATTTCCACCCGAGCAAAGA 57.714 45.000 0.00 0.00 0.00 2.52
4218 4601 3.254657 TGTAAATTTCCACCCGAGCAAAG 59.745 43.478 0.00 0.00 0.00 2.77
4219 4602 3.223435 TGTAAATTTCCACCCGAGCAAA 58.777 40.909 0.00 0.00 0.00 3.68
4220 4603 2.865079 TGTAAATTTCCACCCGAGCAA 58.135 42.857 0.00 0.00 0.00 3.91
4221 4604 2.570415 TGTAAATTTCCACCCGAGCA 57.430 45.000 0.00 0.00 0.00 4.26
4222 4605 3.078837 TCTTGTAAATTTCCACCCGAGC 58.921 45.455 0.00 0.00 0.00 5.03
4223 4606 4.517453 TGTTCTTGTAAATTTCCACCCGAG 59.483 41.667 0.00 0.00 0.00 4.63
4224 4607 4.462133 TGTTCTTGTAAATTTCCACCCGA 58.538 39.130 0.00 0.00 0.00 5.14
4225 4608 4.839668 TGTTCTTGTAAATTTCCACCCG 57.160 40.909 0.00 0.00 0.00 5.28
4226 4609 5.245075 TCCATGTTCTTGTAAATTTCCACCC 59.755 40.000 0.00 0.00 0.00 4.61
4227 4610 6.208599 TCTCCATGTTCTTGTAAATTTCCACC 59.791 38.462 0.00 0.00 0.00 4.61
4228 4611 7.214467 TCTCCATGTTCTTGTAAATTTCCAC 57.786 36.000 0.00 0.00 0.00 4.02
4229 4612 7.577426 GCATCTCCATGTTCTTGTAAATTTCCA 60.577 37.037 0.00 0.00 31.86 3.53
4230 4613 6.753744 GCATCTCCATGTTCTTGTAAATTTCC 59.246 38.462 0.00 0.00 31.86 3.13
4231 4614 7.274250 GTGCATCTCCATGTTCTTGTAAATTTC 59.726 37.037 0.00 0.00 31.86 2.17
4232 4615 7.092716 GTGCATCTCCATGTTCTTGTAAATTT 58.907 34.615 0.00 0.00 31.86 1.82
4233 4616 6.209192 TGTGCATCTCCATGTTCTTGTAAATT 59.791 34.615 0.00 0.00 31.86 1.82
4234 4617 5.711506 TGTGCATCTCCATGTTCTTGTAAAT 59.288 36.000 0.00 0.00 31.86 1.40
4235 4618 5.069318 TGTGCATCTCCATGTTCTTGTAAA 58.931 37.500 0.00 0.00 31.86 2.01
4236 4619 4.650734 TGTGCATCTCCATGTTCTTGTAA 58.349 39.130 0.00 0.00 31.86 2.41
4237 4620 4.284829 TGTGCATCTCCATGTTCTTGTA 57.715 40.909 0.00 0.00 31.86 2.41
4238 4621 3.144657 TGTGCATCTCCATGTTCTTGT 57.855 42.857 0.00 0.00 31.86 3.16
4239 4622 4.713824 AATGTGCATCTCCATGTTCTTG 57.286 40.909 0.00 0.00 31.86 3.02
4240 4623 5.733620 AAAATGTGCATCTCCATGTTCTT 57.266 34.783 0.00 0.00 31.86 2.52
4241 4624 7.254898 CGTATAAAATGTGCATCTCCATGTTCT 60.255 37.037 0.00 0.00 31.86 3.01
4242 4625 6.852853 CGTATAAAATGTGCATCTCCATGTTC 59.147 38.462 0.00 0.00 31.86 3.18
4243 4626 6.542005 TCGTATAAAATGTGCATCTCCATGTT 59.458 34.615 0.00 0.00 31.86 2.71
4244 4627 6.054941 TCGTATAAAATGTGCATCTCCATGT 58.945 36.000 0.00 0.00 31.86 3.21
4245 4628 6.203530 ACTCGTATAAAATGTGCATCTCCATG 59.796 38.462 0.00 0.00 0.00 3.66
4246 4629 6.203530 CACTCGTATAAAATGTGCATCTCCAT 59.796 38.462 0.00 0.00 0.00 3.41
4247 4630 5.523552 CACTCGTATAAAATGTGCATCTCCA 59.476 40.000 0.00 0.00 0.00 3.86
4248 4631 5.753438 TCACTCGTATAAAATGTGCATCTCC 59.247 40.000 0.00 0.00 0.00 3.71
4249 4632 6.828502 TCACTCGTATAAAATGTGCATCTC 57.171 37.500 0.00 0.00 0.00 2.75
4250 4633 7.212976 AGATCACTCGTATAAAATGTGCATCT 58.787 34.615 0.00 0.00 0.00 2.90
4251 4634 7.413475 AGATCACTCGTATAAAATGTGCATC 57.587 36.000 0.00 0.00 0.00 3.91
4252 4635 7.792374 AAGATCACTCGTATAAAATGTGCAT 57.208 32.000 0.00 0.00 0.00 3.96
4253 4636 7.549134 AGAAAGATCACTCGTATAAAATGTGCA 59.451 33.333 0.00 0.00 0.00 4.57
4254 4637 7.848051 CAGAAAGATCACTCGTATAAAATGTGC 59.152 37.037 0.00 0.00 0.00 4.57
4255 4638 8.873830 ACAGAAAGATCACTCGTATAAAATGTG 58.126 33.333 0.00 0.00 0.00 3.21
4256 4639 8.873830 CACAGAAAGATCACTCGTATAAAATGT 58.126 33.333 0.00 0.00 0.00 2.71
4257 4640 9.087424 TCACAGAAAGATCACTCGTATAAAATG 57.913 33.333 0.00 0.00 0.00 2.32
4258 4641 9.088512 GTCACAGAAAGATCACTCGTATAAAAT 57.911 33.333 0.00 0.00 0.00 1.82
4259 4642 8.304596 AGTCACAGAAAGATCACTCGTATAAAA 58.695 33.333 0.00 0.00 0.00 1.52
4260 4643 7.827701 AGTCACAGAAAGATCACTCGTATAAA 58.172 34.615 0.00 0.00 0.00 1.40
4261 4644 7.392494 AGTCACAGAAAGATCACTCGTATAA 57.608 36.000 0.00 0.00 0.00 0.98
4262 4645 7.392494 AAGTCACAGAAAGATCACTCGTATA 57.608 36.000 0.00 0.00 0.00 1.47
4263 4646 5.906113 AGTCACAGAAAGATCACTCGTAT 57.094 39.130 0.00 0.00 0.00 3.06
4264 4647 5.707242 AAGTCACAGAAAGATCACTCGTA 57.293 39.130 0.00 0.00 0.00 3.43
4265 4648 4.592485 AAGTCACAGAAAGATCACTCGT 57.408 40.909 0.00 0.00 0.00 4.18
4266 4649 5.914085 AAAAGTCACAGAAAGATCACTCG 57.086 39.130 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.