Multiple sequence alignment - TraesCS2A01G036300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G036300 chr2A 100.000 4540 0 0 1 4540 15606548 15611087 0.000000e+00 8384.0
1 TraesCS2A01G036300 chr2A 100.000 2405 0 0 4775 7179 15611322 15613726 0.000000e+00 4442.0
2 TraesCS2A01G036300 chr2A 89.247 279 22 6 4247 4521 62388301 62388027 6.900000e-90 342.0
3 TraesCS2A01G036300 chr2D 92.600 4000 190 48 332 4250 13525763 13529737 0.000000e+00 5650.0
4 TraesCS2A01G036300 chr2D 95.238 609 19 5 5117 5720 13530138 13530741 0.000000e+00 955.0
5 TraesCS2A01G036300 chr2D 93.429 350 18 3 4775 5119 13529759 13530108 1.380000e-141 514.0
6 TraesCS2A01G036300 chr2D 78.799 849 93 43 5716 6507 13531563 13532381 2.330000e-134 490.0
7 TraesCS2A01G036300 chr2D 91.221 262 20 2 6809 7068 13532684 13532944 3.190000e-93 353.0
8 TraesCS2A01G036300 chr2D 88.929 280 21 8 4247 4521 62063204 62062930 3.210000e-88 337.0
9 TraesCS2A01G036300 chr2B 91.757 2402 133 33 2160 4539 24239728 24242086 0.000000e+00 3278.0
10 TraesCS2A01G036300 chr2B 88.906 1262 99 23 4775 6007 24242121 24243370 0.000000e+00 1517.0
11 TraesCS2A01G036300 chr2B 88.506 783 68 7 1364 2143 24238900 24239663 0.000000e+00 928.0
12 TraesCS2A01G036300 chr2B 83.453 973 67 27 6055 6986 24243372 24244291 0.000000e+00 819.0
13 TraesCS2A01G036300 chr2B 84.511 807 68 22 336 1096 24237825 24238620 0.000000e+00 745.0
14 TraesCS2A01G036300 chr2B 91.176 136 10 2 6932 7066 24688189 24688055 4.420000e-42 183.0
15 TraesCS2A01G036300 chr7B 86.279 809 78 15 1181 1968 611521385 611522181 0.000000e+00 848.0
16 TraesCS2A01G036300 chr7B 91.011 267 19 3 4245 4508 540063195 540063459 8.860000e-94 355.0
17 TraesCS2A01G036300 chr3B 87.794 680 47 17 3206 3881 84437818 84437171 0.000000e+00 763.0
18 TraesCS2A01G036300 chr3B 86.131 274 27 5 3882 4153 84437106 84436842 1.180000e-72 285.0
19 TraesCS2A01G036300 chr3B 100.000 31 0 0 366 396 771423498 771423468 2.800000e-04 58.4
20 TraesCS2A01G036300 chr5B 78.092 1237 209 48 1365 2565 308227190 308228400 0.000000e+00 726.0
21 TraesCS2A01G036300 chr5B 79.725 291 45 10 5123 5404 308230648 308230933 1.580000e-46 198.0
22 TraesCS2A01G036300 chr5B 88.272 162 16 3 38 198 111903837 111903996 2.640000e-44 191.0
23 TraesCS2A01G036300 chr5A 78.105 1224 205 44 1365 2562 361870040 361871226 0.000000e+00 717.0
24 TraesCS2A01G036300 chr5A 93.671 158 7 3 38 194 540399929 540399774 4.330000e-57 233.0
25 TraesCS2A01G036300 chr3A 86.337 688 52 16 3206 3881 64994644 64993987 0.000000e+00 712.0
26 TraesCS2A01G036300 chr3A 94.304 158 7 2 38 194 548149196 548149352 2.590000e-59 241.0
27 TraesCS2A01G036300 chr3A 78.832 274 26 13 3882 4153 64993924 64993681 9.640000e-34 156.0
28 TraesCS2A01G036300 chr3A 87.778 90 10 1 7080 7169 692485162 692485250 3.540000e-18 104.0
29 TraesCS2A01G036300 chr3A 86.301 73 9 1 397 469 727191820 727191891 2.150000e-10 78.7
30 TraesCS2A01G036300 chr3D 86.192 688 53 18 3206 3881 53615735 53615078 0.000000e+00 706.0
31 TraesCS2A01G036300 chr3D 83.212 274 31 7 3882 4153 53615015 53614755 3.350000e-58 237.0
32 TraesCS2A01G036300 chr3D 91.358 162 13 1 35 196 333516014 333516174 3.370000e-53 220.0
33 TraesCS2A01G036300 chr5D 77.958 1234 197 59 1365 2562 272136654 272137848 0.000000e+00 702.0
34 TraesCS2A01G036300 chr5D 91.667 72 5 1 4166 4236 289080565 289080636 1.650000e-16 99.0
35 TraesCS2A01G036300 chr7D 90.262 267 21 3 4246 4509 199607139 199606875 1.920000e-90 344.0
36 TraesCS2A01G036300 chr7D 89.706 272 22 4 4240 4508 485106452 485106720 6.900000e-90 342.0
37 TraesCS2A01G036300 chr7D 84.615 78 9 3 4155 4232 182808258 182808332 2.780000e-09 75.0
38 TraesCS2A01G036300 chr6D 89.259 270 18 6 4248 4512 411402239 411402502 1.930000e-85 327.0
39 TraesCS2A01G036300 chr6D 89.441 161 13 3 38 197 47784575 47784732 4.390000e-47 200.0
40 TraesCS2A01G036300 chr6D 96.939 98 2 1 7082 7179 458328828 458328732 5.760000e-36 163.0
41 TraesCS2A01G036300 chr4D 88.192 271 25 5 4241 4508 380282225 380281959 4.180000e-82 316.0
42 TraesCS2A01G036300 chr4D 86.250 160 11 6 38 188 357533353 357533510 5.760000e-36 163.0
43 TraesCS2A01G036300 chr4A 87.778 270 26 6 4239 4505 83722148 83722413 6.990000e-80 309.0
44 TraesCS2A01G036300 chr7A 91.813 171 12 2 32 201 77469028 77469197 3.350000e-58 237.0
45 TraesCS2A01G036300 chr7A 85.714 77 9 2 4156 4232 188892221 188892147 5.970000e-11 80.5
46 TraesCS2A01G036300 chr1A 92.994 157 10 1 38 194 510456551 510456396 2.010000e-55 228.0
47 TraesCS2A01G036300 chr1D 90.260 154 11 4 36 188 474066932 474067082 1.580000e-46 198.0
48 TraesCS2A01G036300 chr1D 83.784 74 12 0 4157 4230 19263741 19263668 3.590000e-08 71.3
49 TraesCS2A01G036300 chr1D 91.489 47 4 0 4156 4202 247528668 247528714 1.670000e-06 65.8
50 TraesCS2A01G036300 chr1D 100.000 29 0 0 6619 6647 493900162 493900134 4.000000e-03 54.7
51 TraesCS2A01G036300 chr6A 89.474 76 8 0 4157 4232 464514282 464514357 5.930000e-16 97.1
52 TraesCS2A01G036300 chrUn 87.143 70 8 1 400 469 277302875 277302807 2.150000e-10 78.7
53 TraesCS2A01G036300 chrUn 87.143 70 8 1 400 469 283234092 283234024 2.150000e-10 78.7
54 TraesCS2A01G036300 chr1B 84.286 70 11 0 4163 4232 28816057 28815988 1.290000e-07 69.4
55 TraesCS2A01G036300 chr1B 100.000 29 0 0 6619 6647 686882357 686882329 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G036300 chr2A 15606548 15613726 7178 False 6413.0 8384 100.0000 1 7179 2 chr2A.!!$F1 7178
1 TraesCS2A01G036300 chr2D 13525763 13532944 7181 False 1592.4 5650 90.2574 332 7068 5 chr2D.!!$F1 6736
2 TraesCS2A01G036300 chr2B 24237825 24244291 6466 False 1457.4 3278 87.4266 336 6986 5 chr2B.!!$F1 6650
3 TraesCS2A01G036300 chr7B 611521385 611522181 796 False 848.0 848 86.2790 1181 1968 1 chr7B.!!$F2 787
4 TraesCS2A01G036300 chr3B 84436842 84437818 976 True 524.0 763 86.9625 3206 4153 2 chr3B.!!$R2 947
5 TraesCS2A01G036300 chr5B 308227190 308230933 3743 False 462.0 726 78.9085 1365 5404 2 chr5B.!!$F2 4039
6 TraesCS2A01G036300 chr5A 361870040 361871226 1186 False 717.0 717 78.1050 1365 2562 1 chr5A.!!$F1 1197
7 TraesCS2A01G036300 chr3A 64993681 64994644 963 True 434.0 712 82.5845 3206 4153 2 chr3A.!!$R1 947
8 TraesCS2A01G036300 chr3D 53614755 53615735 980 True 471.5 706 84.7020 3206 4153 2 chr3D.!!$R1 947
9 TraesCS2A01G036300 chr5D 272136654 272137848 1194 False 702.0 702 77.9580 1365 2562 1 chr5D.!!$F1 1197

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
163 164 0.179018 AAGCTGTGGGGTCAACTGAC 60.179 55.000 0.98 0.98 44.04 3.51 F
191 192 0.179081 CTAACACCTAGCTTCGCCCC 60.179 60.000 0.00 0.00 0.00 5.80 F
327 328 0.515564 CCGGCGTCGACTTTGATTTT 59.484 50.000 12.93 0.00 39.00 1.82 F
1782 1928 0.371645 GCATGAAAGGTTCGAGCTCG 59.628 55.000 30.03 30.03 41.45 5.03 F
1788 1934 0.603569 AAGGTTCGAGCTCGTGTGAT 59.396 50.000 33.33 16.70 40.80 3.06 F
1856 2005 0.949397 GAACCGTGGTCCTGTTTTCC 59.051 55.000 0.00 0.00 0.00 3.13 F
2400 2630 1.375268 GGGAGTGTGTGCTGAGCTC 60.375 63.158 6.82 6.82 0.00 4.09 F
2444 2674 5.125367 ACAAGGGAAGACCAAGTAAGTTT 57.875 39.130 0.00 0.00 43.89 2.66 F
4476 5200 2.689983 AGTTTGACCCAAGACAAAGCTG 59.310 45.455 0.00 0.00 38.11 4.24 F
5425 6218 0.671163 ATTCCGTGTCCGCGCTAAAA 60.671 50.000 5.56 0.00 0.00 1.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1225 1310 0.037326 CATCACGCCACACCAGTAGT 60.037 55.000 0.00 0.0 0.00 2.73 R
1226 1311 0.037326 ACATCACGCCACACCAGTAG 60.037 55.000 0.00 0.0 0.00 2.57 R
1838 1987 0.466739 GGGAAAACAGGACCACGGTT 60.467 55.000 0.00 0.0 39.22 4.44 R
3177 3639 7.243487 CGCTCATTACTTTGAATAGCAAAAGA 58.757 34.615 2.38 0.0 45.26 2.52 R
3290 3772 8.093927 CAGAGGGCATTAGGAAAACAAATAAAA 58.906 33.333 0.00 0.0 0.00 1.52 R
3944 4543 6.064717 ACAGAGGACAGCAAGAAAACTAATT 58.935 36.000 0.00 0.0 0.00 1.40 R
4268 4987 3.118408 TGGTCAAAGCTAATATGCGGAGT 60.118 43.478 0.00 0.0 38.13 3.85 R
4496 5220 5.047235 ACAATGAACTATATACTCCCTCCGC 60.047 44.000 0.00 0.0 0.00 5.54 R
6082 7754 0.487325 TCTCCCTGAGGACCTGTTGA 59.513 55.000 0.00 0.0 37.19 3.18 R
7129 8947 0.036388 TAGCGCTGTTGGGAAGGAAG 60.036 55.000 22.90 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.306902 TCCCGCTCATCTTCCTCTT 57.693 52.632 0.00 0.00 0.00 2.85
19 20 0.826715 TCCCGCTCATCTTCCTCTTG 59.173 55.000 0.00 0.00 0.00 3.02
20 21 0.826715 CCCGCTCATCTTCCTCTTGA 59.173 55.000 0.00 0.00 0.00 3.02
21 22 1.415659 CCCGCTCATCTTCCTCTTGAT 59.584 52.381 0.00 0.00 0.00 2.57
22 23 2.547642 CCCGCTCATCTTCCTCTTGATC 60.548 54.545 0.00 0.00 0.00 2.92
23 24 2.364970 CCGCTCATCTTCCTCTTGATCT 59.635 50.000 0.00 0.00 0.00 2.75
24 25 3.382855 CGCTCATCTTCCTCTTGATCTG 58.617 50.000 0.00 0.00 0.00 2.90
25 26 3.067883 CGCTCATCTTCCTCTTGATCTGA 59.932 47.826 0.00 0.00 0.00 3.27
26 27 4.370917 GCTCATCTTCCTCTTGATCTGAC 58.629 47.826 0.00 0.00 0.00 3.51
27 28 4.740334 GCTCATCTTCCTCTTGATCTGACC 60.740 50.000 0.00 0.00 0.00 4.02
28 29 4.356436 TCATCTTCCTCTTGATCTGACCA 58.644 43.478 0.00 0.00 0.00 4.02
29 30 4.161189 TCATCTTCCTCTTGATCTGACCAC 59.839 45.833 0.00 0.00 0.00 4.16
30 31 2.834549 TCTTCCTCTTGATCTGACCACC 59.165 50.000 0.00 0.00 0.00 4.61
31 32 2.630889 TCCTCTTGATCTGACCACCT 57.369 50.000 0.00 0.00 0.00 4.00
32 33 2.461695 TCCTCTTGATCTGACCACCTC 58.538 52.381 0.00 0.00 0.00 3.85
33 34 1.135915 CCTCTTGATCTGACCACCTCG 59.864 57.143 0.00 0.00 0.00 4.63
34 35 0.532573 TCTTGATCTGACCACCTCGC 59.467 55.000 0.00 0.00 0.00 5.03
35 36 0.803768 CTTGATCTGACCACCTCGCG 60.804 60.000 0.00 0.00 0.00 5.87
36 37 1.532604 TTGATCTGACCACCTCGCGT 61.533 55.000 5.77 0.00 0.00 6.01
37 38 1.226717 GATCTGACCACCTCGCGTC 60.227 63.158 5.77 0.00 0.00 5.19
38 39 1.934220 GATCTGACCACCTCGCGTCA 61.934 60.000 5.77 0.00 37.44 4.35
40 41 4.357947 TGACCACCTCGCGTCAGC 62.358 66.667 5.77 0.00 34.14 4.26
65 66 2.482494 AGGCCAGCCTAAAGTATCTGT 58.518 47.619 10.11 0.00 46.14 3.41
66 67 2.171448 AGGCCAGCCTAAAGTATCTGTG 59.829 50.000 10.11 0.00 46.14 3.66
67 68 2.565841 GCCAGCCTAAAGTATCTGTGG 58.434 52.381 0.00 0.00 0.00 4.17
68 69 2.746472 GCCAGCCTAAAGTATCTGTGGG 60.746 54.545 0.00 0.00 0.00 4.61
69 70 2.158755 CCAGCCTAAAGTATCTGTGGGG 60.159 54.545 0.00 0.00 0.00 4.96
70 71 2.505819 CAGCCTAAAGTATCTGTGGGGT 59.494 50.000 0.00 0.00 0.00 4.95
71 72 2.772515 AGCCTAAAGTATCTGTGGGGTC 59.227 50.000 0.00 0.00 0.00 4.46
72 73 2.504175 GCCTAAAGTATCTGTGGGGTCA 59.496 50.000 0.00 0.00 0.00 4.02
73 74 3.054655 GCCTAAAGTATCTGTGGGGTCAA 60.055 47.826 0.00 0.00 0.00 3.18
74 75 4.385310 GCCTAAAGTATCTGTGGGGTCAAT 60.385 45.833 0.00 0.00 0.00 2.57
75 76 5.126067 CCTAAAGTATCTGTGGGGTCAATG 58.874 45.833 0.00 0.00 0.00 2.82
76 77 3.652057 AAGTATCTGTGGGGTCAATGG 57.348 47.619 0.00 0.00 0.00 3.16
77 78 2.562296 AGTATCTGTGGGGTCAATGGT 58.438 47.619 0.00 0.00 0.00 3.55
78 79 3.731431 AGTATCTGTGGGGTCAATGGTA 58.269 45.455 0.00 0.00 0.00 3.25
79 80 4.307259 AGTATCTGTGGGGTCAATGGTAT 58.693 43.478 0.00 0.00 0.00 2.73
80 81 4.726825 AGTATCTGTGGGGTCAATGGTATT 59.273 41.667 0.00 0.00 0.00 1.89
81 82 4.608170 ATCTGTGGGGTCAATGGTATTT 57.392 40.909 0.00 0.00 0.00 1.40
82 83 3.696045 TCTGTGGGGTCAATGGTATTTG 58.304 45.455 0.00 0.00 0.00 2.32
83 84 3.075283 TCTGTGGGGTCAATGGTATTTGT 59.925 43.478 0.00 0.00 0.00 2.83
84 85 3.831911 CTGTGGGGTCAATGGTATTTGTT 59.168 43.478 0.00 0.00 0.00 2.83
85 86 3.576118 TGTGGGGTCAATGGTATTTGTTG 59.424 43.478 0.00 0.00 0.00 3.33
86 87 3.056179 GTGGGGTCAATGGTATTTGTTGG 60.056 47.826 0.00 0.00 0.00 3.77
87 88 3.181417 TGGGGTCAATGGTATTTGTTGGA 60.181 43.478 0.00 0.00 0.00 3.53
88 89 4.030216 GGGGTCAATGGTATTTGTTGGAT 58.970 43.478 0.00 0.00 0.00 3.41
89 90 4.469586 GGGGTCAATGGTATTTGTTGGATT 59.530 41.667 0.00 0.00 0.00 3.01
90 91 5.045942 GGGGTCAATGGTATTTGTTGGATTT 60.046 40.000 0.00 0.00 0.00 2.17
91 92 6.472016 GGGTCAATGGTATTTGTTGGATTTT 58.528 36.000 0.00 0.00 0.00 1.82
92 93 6.939730 GGGTCAATGGTATTTGTTGGATTTTT 59.060 34.615 0.00 0.00 0.00 1.94
122 123 8.310406 TCAGTATGAACAGTAATTGAACAGTG 57.690 34.615 0.00 0.00 45.97 3.66
123 124 7.931407 TCAGTATGAACAGTAATTGAACAGTGT 59.069 33.333 0.00 0.00 45.97 3.55
124 125 8.559536 CAGTATGAACAGTAATTGAACAGTGTT 58.440 33.333 8.61 8.61 40.21 3.32
125 126 9.120538 AGTATGAACAGTAATTGAACAGTGTTT 57.879 29.630 10.45 0.00 38.19 2.83
126 127 9.730420 GTATGAACAGTAATTGAACAGTGTTTT 57.270 29.630 10.45 3.31 38.19 2.43
129 130 9.781834 TGAACAGTAATTGAACAGTGTTTTTAG 57.218 29.630 10.45 2.16 38.19 1.85
130 131 9.233232 GAACAGTAATTGAACAGTGTTTTTAGG 57.767 33.333 10.45 7.02 38.19 2.69
131 132 7.200455 ACAGTAATTGAACAGTGTTTTTAGGC 58.800 34.615 10.45 0.00 0.00 3.93
132 133 7.068226 ACAGTAATTGAACAGTGTTTTTAGGCT 59.932 33.333 10.45 2.98 0.00 4.58
133 134 8.564574 CAGTAATTGAACAGTGTTTTTAGGCTA 58.435 33.333 10.45 0.00 0.00 3.93
134 135 9.127277 AGTAATTGAACAGTGTTTTTAGGCTAA 57.873 29.630 10.45 2.04 0.00 3.09
135 136 9.908152 GTAATTGAACAGTGTTTTTAGGCTAAT 57.092 29.630 10.45 0.00 0.00 1.73
137 138 9.830975 AATTGAACAGTGTTTTTAGGCTAATTT 57.169 25.926 10.45 0.00 0.00 1.82
138 139 9.830975 ATTGAACAGTGTTTTTAGGCTAATTTT 57.169 25.926 10.45 0.00 0.00 1.82
139 140 8.865590 TGAACAGTGTTTTTAGGCTAATTTTC 57.134 30.769 10.45 2.06 0.00 2.29
140 141 8.691797 TGAACAGTGTTTTTAGGCTAATTTTCT 58.308 29.630 10.45 1.41 0.00 2.52
151 152 9.691362 TTTAGGCTAATTTTCTAAAAAGCTGTG 57.309 29.630 7.96 0.00 34.06 3.66
152 153 6.691508 AGGCTAATTTTCTAAAAAGCTGTGG 58.308 36.000 10.21 0.00 34.06 4.17
153 154 5.869344 GGCTAATTTTCTAAAAAGCTGTGGG 59.131 40.000 10.21 0.00 34.06 4.61
154 155 5.869344 GCTAATTTTCTAAAAAGCTGTGGGG 59.131 40.000 0.00 0.00 32.01 4.96
155 156 5.887214 AATTTTCTAAAAAGCTGTGGGGT 57.113 34.783 0.00 0.00 0.00 4.95
156 157 4.929819 TTTTCTAAAAAGCTGTGGGGTC 57.070 40.909 0.00 0.00 0.00 4.46
157 158 3.586470 TTCTAAAAAGCTGTGGGGTCA 57.414 42.857 0.00 0.00 0.00 4.02
158 159 3.586470 TCTAAAAAGCTGTGGGGTCAA 57.414 42.857 0.00 0.00 0.00 3.18
159 160 3.219281 TCTAAAAAGCTGTGGGGTCAAC 58.781 45.455 0.00 0.00 0.00 3.18
160 161 2.159179 AAAAAGCTGTGGGGTCAACT 57.841 45.000 0.00 0.00 0.00 3.16
161 162 1.402787 AAAAGCTGTGGGGTCAACTG 58.597 50.000 0.00 0.00 0.00 3.16
162 163 0.550914 AAAGCTGTGGGGTCAACTGA 59.449 50.000 0.00 0.00 0.00 3.41
163 164 0.179018 AAGCTGTGGGGTCAACTGAC 60.179 55.000 0.98 0.98 44.04 3.51
172 173 3.307379 GTCAACTGACCCCACAGAC 57.693 57.895 0.00 0.00 40.63 3.51
173 174 0.759346 GTCAACTGACCCCACAGACT 59.241 55.000 0.00 0.00 40.63 3.24
174 175 1.968493 GTCAACTGACCCCACAGACTA 59.032 52.381 0.00 0.00 40.63 2.59
175 176 2.367567 GTCAACTGACCCCACAGACTAA 59.632 50.000 0.00 0.00 40.63 2.24
176 177 2.367567 TCAACTGACCCCACAGACTAAC 59.632 50.000 0.00 0.00 40.63 2.34
177 178 2.097110 ACTGACCCCACAGACTAACA 57.903 50.000 0.00 0.00 40.63 2.41
178 179 1.692519 ACTGACCCCACAGACTAACAC 59.307 52.381 0.00 0.00 40.63 3.32
179 180 1.002087 CTGACCCCACAGACTAACACC 59.998 57.143 0.00 0.00 39.94 4.16
180 181 1.349067 GACCCCACAGACTAACACCT 58.651 55.000 0.00 0.00 0.00 4.00
181 182 2.158279 TGACCCCACAGACTAACACCTA 60.158 50.000 0.00 0.00 0.00 3.08
182 183 2.496470 GACCCCACAGACTAACACCTAG 59.504 54.545 0.00 0.00 0.00 3.02
183 184 1.207329 CCCCACAGACTAACACCTAGC 59.793 57.143 0.00 0.00 0.00 3.42
184 185 2.180276 CCCACAGACTAACACCTAGCT 58.820 52.381 0.00 0.00 0.00 3.32
185 186 2.567615 CCCACAGACTAACACCTAGCTT 59.432 50.000 0.00 0.00 0.00 3.74
186 187 3.368531 CCCACAGACTAACACCTAGCTTC 60.369 52.174 0.00 0.00 0.00 3.86
187 188 3.502920 CACAGACTAACACCTAGCTTCG 58.497 50.000 0.00 0.00 0.00 3.79
188 189 2.094649 ACAGACTAACACCTAGCTTCGC 60.095 50.000 0.00 0.00 0.00 4.70
189 190 1.477295 AGACTAACACCTAGCTTCGCC 59.523 52.381 0.00 0.00 0.00 5.54
190 191 0.535797 ACTAACACCTAGCTTCGCCC 59.464 55.000 0.00 0.00 0.00 6.13
191 192 0.179081 CTAACACCTAGCTTCGCCCC 60.179 60.000 0.00 0.00 0.00 5.80
192 193 0.616679 TAACACCTAGCTTCGCCCCT 60.617 55.000 0.00 0.00 0.00 4.79
193 194 2.185310 AACACCTAGCTTCGCCCCTG 62.185 60.000 0.00 0.00 0.00 4.45
194 195 3.787001 ACCTAGCTTCGCCCCTGC 61.787 66.667 0.00 0.00 0.00 4.85
195 196 4.554036 CCTAGCTTCGCCCCTGCC 62.554 72.222 0.00 0.00 0.00 4.85
196 197 3.474570 CTAGCTTCGCCCCTGCCT 61.475 66.667 0.00 0.00 0.00 4.75
197 198 3.453070 CTAGCTTCGCCCCTGCCTC 62.453 68.421 0.00 0.00 0.00 4.70
206 207 4.814294 CCCTGCCTCGCGTACCAC 62.814 72.222 5.77 0.00 0.00 4.16
207 208 4.814294 CCTGCCTCGCGTACCACC 62.814 72.222 5.77 0.00 0.00 4.61
216 217 4.360964 CGTACCACCGGCCGAACA 62.361 66.667 30.73 3.42 0.00 3.18
217 218 2.433664 GTACCACCGGCCGAACAG 60.434 66.667 30.73 12.89 0.00 3.16
218 219 4.382320 TACCACCGGCCGAACAGC 62.382 66.667 30.73 0.00 0.00 4.40
227 228 4.697756 CCGAACAGCCGGCTTCCA 62.698 66.667 30.60 0.00 43.25 3.53
228 229 3.423154 CGAACAGCCGGCTTCCAC 61.423 66.667 30.60 17.25 0.00 4.02
229 230 3.056328 GAACAGCCGGCTTCCACC 61.056 66.667 30.60 10.85 0.00 4.61
230 231 3.553095 GAACAGCCGGCTTCCACCT 62.553 63.158 30.60 7.37 0.00 4.00
231 232 3.553095 AACAGCCGGCTTCCACCTC 62.553 63.158 30.60 0.00 0.00 3.85
232 233 4.785453 CAGCCGGCTTCCACCTCC 62.785 72.222 30.60 0.00 0.00 4.30
301 302 4.499116 CCTCCCCCGGACATCCCT 62.499 72.222 0.73 0.00 0.00 4.20
302 303 2.844839 CTCCCCCGGACATCCCTC 60.845 72.222 0.73 0.00 0.00 4.30
303 304 3.364964 TCCCCCGGACATCCCTCT 61.365 66.667 0.73 0.00 0.00 3.69
304 305 2.016315 TCCCCCGGACATCCCTCTA 61.016 63.158 0.73 0.00 0.00 2.43
305 306 1.534235 CCCCCGGACATCCCTCTAG 60.534 68.421 0.73 0.00 0.00 2.43
306 307 2.210711 CCCCGGACATCCCTCTAGC 61.211 68.421 0.73 0.00 0.00 3.42
307 308 2.210711 CCCGGACATCCCTCTAGCC 61.211 68.421 0.73 0.00 0.00 3.93
308 309 2.210711 CCGGACATCCCTCTAGCCC 61.211 68.421 0.00 0.00 0.00 5.19
309 310 2.210711 CGGACATCCCTCTAGCCCC 61.211 68.421 0.00 0.00 0.00 5.80
310 311 2.210711 GGACATCCCTCTAGCCCCG 61.211 68.421 0.00 0.00 0.00 5.73
311 312 2.122813 ACATCCCTCTAGCCCCGG 60.123 66.667 0.00 0.00 0.00 5.73
312 313 3.631046 CATCCCTCTAGCCCCGGC 61.631 72.222 0.00 0.00 42.33 6.13
323 324 4.367023 CCCCGGCGTCGACTTTGA 62.367 66.667 12.93 0.00 39.00 2.69
324 325 2.125673 CCCGGCGTCGACTTTGAT 60.126 61.111 12.93 0.00 39.00 2.57
325 326 1.740296 CCCGGCGTCGACTTTGATT 60.740 57.895 12.93 0.00 39.00 2.57
326 327 1.296056 CCCGGCGTCGACTTTGATTT 61.296 55.000 12.93 0.00 39.00 2.17
327 328 0.515564 CCGGCGTCGACTTTGATTTT 59.484 50.000 12.93 0.00 39.00 1.82
328 329 1.463528 CCGGCGTCGACTTTGATTTTC 60.464 52.381 12.93 0.00 39.00 2.29
329 330 1.463528 CGGCGTCGACTTTGATTTTCC 60.464 52.381 14.70 0.20 39.00 3.13
330 331 1.533731 GGCGTCGACTTTGATTTTCCA 59.466 47.619 14.70 0.00 0.00 3.53
360 361 3.706373 ACCATCCGCCGTTCTGCT 61.706 61.111 0.00 0.00 0.00 4.24
370 371 4.284550 GTTCTGCTGCCCCCACCA 62.285 66.667 0.00 0.00 0.00 4.17
415 418 4.840680 CACCCATCCTAAGATAGATGGTGA 59.159 45.833 15.80 0.00 42.10 4.02
449 452 0.686112 CGAGCTCCTTCCTTCCCTCT 60.686 60.000 8.47 0.00 0.00 3.69
504 507 1.512926 CCCAAACCGAAGTCAGTCAG 58.487 55.000 0.00 0.00 0.00 3.51
524 527 2.069273 GCTGACATTTAGCTGACGTGT 58.931 47.619 0.00 0.00 38.14 4.49
525 528 2.480419 GCTGACATTTAGCTGACGTGTT 59.520 45.455 0.00 0.00 38.14 3.32
526 529 3.058914 GCTGACATTTAGCTGACGTGTTT 60.059 43.478 0.00 0.00 38.14 2.83
668 681 1.469308 CCCCGTTATAAACAGCGCAAA 59.531 47.619 11.47 0.00 0.00 3.68
669 682 2.095161 CCCCGTTATAAACAGCGCAAAA 60.095 45.455 11.47 0.00 0.00 2.44
792 838 0.998945 CCCTCCCTCCCTCTCTCTCT 60.999 65.000 0.00 0.00 0.00 3.10
970 1027 4.396790 AGTTTGTTTTTGTTCGCCTGACTA 59.603 37.500 0.00 0.00 0.00 2.59
984 1041 2.420022 CCTGACTAATTTTGCAGGTCGG 59.580 50.000 0.00 0.00 42.26 4.79
986 1043 3.745799 TGACTAATTTTGCAGGTCGGAA 58.254 40.909 0.00 0.00 0.00 4.30
1009 1066 2.048603 GGAGCTGCCATGGGTTCAC 61.049 63.158 15.13 0.00 36.34 3.18
1032 1089 2.446036 ATCGGCCCCAGAGGTACC 60.446 66.667 2.73 2.73 38.26 3.34
1052 1109 1.741770 CCCGCTTCCTTGTTCCTCG 60.742 63.158 0.00 0.00 0.00 4.63
1066 1133 2.638154 CTCGTCTCGCCCCGTATC 59.362 66.667 0.00 0.00 0.00 2.24
1073 1140 1.228215 TCGCCCCGTATCGTATCCA 60.228 57.895 0.00 0.00 0.00 3.41
1123 1190 4.453819 GGGCAGCTTGTCTATGATAATGTC 59.546 45.833 0.00 0.00 0.00 3.06
1154 1238 4.707934 AGCTCCTTCTTACTAGTTCAGACC 59.292 45.833 0.00 0.00 0.00 3.85
1222 1307 9.743057 CAAAGGTGTAAACAAATGATTCACTAA 57.257 29.630 0.00 0.00 0.00 2.24
1283 1407 7.149031 GGTTTTATTTTCTTGTGTGCACGTATC 60.149 37.037 13.13 3.39 0.00 2.24
1357 1488 4.678509 AATTTACTGTATGTGGTGTGCG 57.321 40.909 0.00 0.00 0.00 5.34
1487 1630 0.736325 CTACCAAACTCGGCTCCGTG 60.736 60.000 8.28 8.46 40.74 4.94
1523 1668 6.753279 GTGAGATCAGCATCTTCTCTATATGC 59.247 42.308 0.00 0.00 45.02 3.14
1740 1886 0.963355 ACACGGTTGTTTGCACCACT 60.963 50.000 0.00 0.00 28.43 4.00
1782 1928 0.371645 GCATGAAAGGTTCGAGCTCG 59.628 55.000 30.03 30.03 41.45 5.03
1788 1934 0.603569 AAGGTTCGAGCTCGTGTGAT 59.396 50.000 33.33 16.70 40.80 3.06
1804 1950 4.389992 CGTGTGATCATGCCTGTATAATCC 59.610 45.833 0.00 0.00 0.00 3.01
1809 1955 1.460743 CATGCCTGTATAATCCGTGCG 59.539 52.381 0.00 0.00 0.00 5.34
1826 1975 4.221342 CGTGCGTACAGTTTCTGTAACTA 58.779 43.478 10.55 0.00 46.55 2.24
1832 1981 7.061634 GCGTACAGTTTCTGTAACTAAAACAG 58.938 38.462 10.55 0.00 46.55 3.16
1838 1987 9.834628 CAGTTTCTGTAACTAAAACAGTTTTGA 57.165 29.630 19.77 5.28 45.54 2.69
1842 1991 7.465989 TCTGTAACTAAAACAGTTTTGAACCG 58.534 34.615 19.77 9.48 45.54 4.44
1845 1994 4.989044 ACTAAAACAGTTTTGAACCGTGG 58.011 39.130 19.77 0.00 31.59 4.94
1856 2005 0.949397 GAACCGTGGTCCTGTTTTCC 59.051 55.000 0.00 0.00 0.00 3.13
1901 2055 1.532868 GTTTGCTGCACAGTCGATTCT 59.467 47.619 0.00 0.00 0.00 2.40
2071 2225 5.984233 TGCCTGAATAAACTAAGCATACG 57.016 39.130 0.00 0.00 0.00 3.06
2104 2258 6.715718 AGAGAATGCCAAGATATCCATTTGAG 59.284 38.462 0.00 0.00 0.00 3.02
2163 2370 8.339714 TCTGTTTTGTACTTTGTATTGCTACAC 58.660 33.333 0.00 0.00 37.58 2.90
2171 2378 6.966021 ACTTTGTATTGCTACACGAACAAAT 58.034 32.000 0.00 0.00 37.58 2.32
2172 2379 7.422399 ACTTTGTATTGCTACACGAACAAATT 58.578 30.769 0.00 0.00 37.58 1.82
2174 2381 8.716619 TTTGTATTGCTACACGAACAAATTAC 57.283 30.769 0.00 0.00 37.58 1.89
2185 2392 7.871853 ACACGAACAAATTACTCAGCTAAAAT 58.128 30.769 0.00 0.00 0.00 1.82
2254 2484 8.360390 CAGTACAATGATAGTGTATGCCTCTTA 58.640 37.037 0.00 0.00 34.15 2.10
2258 2488 9.094578 ACAATGATAGTGTATGCCTCTTATACT 57.905 33.333 0.00 0.00 33.29 2.12
2400 2630 1.375268 GGGAGTGTGTGCTGAGCTC 60.375 63.158 6.82 6.82 0.00 4.09
2444 2674 5.125367 ACAAGGGAAGACCAAGTAAGTTT 57.875 39.130 0.00 0.00 43.89 2.66
2450 2680 5.535030 GGGAAGACCAAGTAAGTTTTGACAT 59.465 40.000 0.00 0.00 39.85 3.06
3290 3772 9.125026 CTCTTTGCCAATATTAGTAACCATTCT 57.875 33.333 0.00 0.00 0.00 2.40
3560 4050 5.481824 TGTGTCTGTCTCCATTCTGTATCTT 59.518 40.000 0.00 0.00 0.00 2.40
4085 4693 9.762933 AACGGTAAAGTTTAGTATGTTACTTCA 57.237 29.630 0.00 0.00 40.14 3.02
4202 4810 8.910351 AGTTCTAGCTTTGTCTTAAGTCAAAT 57.090 30.769 22.40 14.24 33.88 2.32
4268 4987 9.603921 CTTATGTACTCCCTCCGTTTTTATTTA 57.396 33.333 0.00 0.00 0.00 1.40
4333 5052 7.763985 AGTTTGACCCAAGTTTATCAAAAACAG 59.236 33.333 7.27 0.00 41.40 3.16
4423 5147 8.865090 TGACTTGGTATTGTGGATGTTATTTTT 58.135 29.630 0.00 0.00 0.00 1.94
4476 5200 2.689983 AGTTTGACCCAAGACAAAGCTG 59.310 45.455 0.00 0.00 38.11 4.24
4497 5221 8.862550 AGCTGATATGCAAAGTAAATAAAAGC 57.137 30.769 0.00 0.00 34.99 3.51
4539 5263 2.079925 GTTGCCACAGATCCTCTTGTC 58.920 52.381 0.00 0.00 0.00 3.18
4833 5560 3.496130 GTCGACTGCCATTATCCAATCTG 59.504 47.826 8.70 0.00 0.00 2.90
4834 5561 3.387699 TCGACTGCCATTATCCAATCTGA 59.612 43.478 0.00 0.00 0.00 3.27
4835 5562 4.129380 CGACTGCCATTATCCAATCTGAA 58.871 43.478 0.00 0.00 0.00 3.02
4970 5712 3.160269 AGTTCTTGCAAGGATCAAAGGG 58.840 45.455 25.73 0.00 0.00 3.95
4995 5737 1.362768 CGATGCAGCTCAAGTAAGCA 58.637 50.000 0.00 0.00 45.00 3.91
5413 6206 3.365969 GCCTTGGTTCAACTAATTCCGTG 60.366 47.826 0.00 0.00 0.00 4.94
5425 6218 0.671163 ATTCCGTGTCCGCGCTAAAA 60.671 50.000 5.56 0.00 0.00 1.52
5485 6279 1.956043 TCCTGTTGGAAATGCACGC 59.044 52.632 0.00 0.00 39.87 5.34
5501 6296 3.936453 TGCACGCCGATCTTTACTATTTT 59.064 39.130 0.00 0.00 0.00 1.82
5695 6490 2.362717 TGTCCTGTGTTGTGATCACGTA 59.637 45.455 20.54 8.76 38.48 3.57
5696 6491 2.729882 GTCCTGTGTTGTGATCACGTAC 59.270 50.000 20.54 19.57 38.48 3.67
5697 6492 1.719246 CCTGTGTTGTGATCACGTACG 59.281 52.381 20.54 15.01 38.48 3.67
5698 6493 2.390938 CTGTGTTGTGATCACGTACGT 58.609 47.619 16.72 16.72 38.48 3.57
5709 6504 2.202623 CGTACGTGCCAGAGCCTC 60.203 66.667 7.22 0.00 38.69 4.70
5710 6505 2.184579 GTACGTGCCAGAGCCTCC 59.815 66.667 0.00 0.00 38.69 4.30
5790 7414 9.088512 ACATCGAAATCTAGTGATACTCAAAAC 57.911 33.333 0.00 0.00 31.70 2.43
5797 7421 6.864342 TCTAGTGATACTCAAAACTAGCACC 58.136 40.000 4.23 0.00 41.15 5.01
5815 7439 3.559242 GCACCAGACATCTTATCTTCAGC 59.441 47.826 0.00 0.00 0.00 4.26
5817 7441 4.036518 ACCAGACATCTTATCTTCAGCCT 58.963 43.478 0.00 0.00 0.00 4.58
5834 7462 8.526978 TCTTCAGCCTATATGACTGCTAATTAG 58.473 37.037 8.20 8.20 31.69 1.73
5932 7584 1.332195 TCGCCCACTCTGATATGAGG 58.668 55.000 0.00 0.00 38.32 3.86
5938 7591 4.262249 GCCCACTCTGATATGAGGAGTTAC 60.262 50.000 0.00 0.00 38.12 2.50
5962 7615 3.081804 CCTGTGGTTTCACTTACCATCC 58.918 50.000 0.00 0.00 46.63 3.51
5966 7619 3.264964 GTGGTTTCACTTACCATCCCCTA 59.735 47.826 0.00 0.00 46.63 3.53
5967 7620 3.917629 TGGTTTCACTTACCATCCCCTAA 59.082 43.478 0.00 0.00 40.65 2.69
5975 7628 2.950990 ACCATCCCCTAACTGTCTCT 57.049 50.000 0.00 0.00 0.00 3.10
5988 7641 2.092429 ACTGTCTCTGGTTTCCTTTGCA 60.092 45.455 0.00 0.00 0.00 4.08
6007 7660 6.395426 TTGCACTCACTTCATCAGATTTTT 57.605 33.333 0.00 0.00 0.00 1.94
6027 7680 5.970140 TTTTTCACACAACATTGCATCTG 57.030 34.783 0.00 0.00 0.00 2.90
6028 7681 2.710220 TCACACAACATTGCATCTGC 57.290 45.000 0.00 0.00 42.50 4.26
6039 7707 1.283793 GCATCTGCAGTGCGTGTTT 59.716 52.632 20.31 0.00 41.59 2.83
6047 7715 3.394719 TGCAGTGCGTGTTTATAGTTGA 58.605 40.909 11.20 0.00 0.00 3.18
6049 7717 5.172205 TGCAGTGCGTGTTTATAGTTGATA 58.828 37.500 11.20 0.00 0.00 2.15
6056 7724 9.417284 GTGCGTGTTTATAGTTGATAATGTAAC 57.583 33.333 0.00 0.00 29.93 2.50
6074 7746 7.611213 ATGTAACTGAACTAAGTAACCATGC 57.389 36.000 0.00 0.00 0.00 4.06
6076 7748 7.898918 TGTAACTGAACTAAGTAACCATGCTA 58.101 34.615 0.00 0.00 0.00 3.49
6079 7751 7.005709 ACTGAACTAAGTAACCATGCTACTT 57.994 36.000 17.56 17.56 41.40 2.24
6082 7754 7.676947 TGAACTAAGTAACCATGCTACTTCTT 58.323 34.615 17.15 11.94 39.66 2.52
6084 7756 7.241042 ACTAAGTAACCATGCTACTTCTTCA 57.759 36.000 17.15 4.70 39.66 3.02
6124 7796 2.750237 GGCAAAATCGGGGTCGCT 60.750 61.111 0.00 0.00 36.13 4.93
6127 7799 2.750237 AAAATCGGGGTCGCTGGC 60.750 61.111 0.00 0.00 36.13 4.85
6172 7844 0.946221 CCGCACTTGTTCTCGAGCTT 60.946 55.000 7.81 0.00 0.00 3.74
6186 7858 0.718343 GAGCTTGCGTAGAAGTGCAG 59.282 55.000 0.00 0.00 42.89 4.41
6187 7859 1.133458 GCTTGCGTAGAAGTGCAGC 59.867 57.895 0.00 0.00 42.89 5.25
6201 7873 1.474077 GTGCAGCCCAAATCCTGTAAG 59.526 52.381 0.00 0.00 0.00 2.34
6310 7995 2.831685 TGTTTCGTGACAGTAGGCAT 57.168 45.000 0.00 0.00 0.00 4.40
6311 7996 2.412870 TGTTTCGTGACAGTAGGCATG 58.587 47.619 0.00 0.00 0.00 4.06
6313 7998 3.064207 GTTTCGTGACAGTAGGCATGAA 58.936 45.455 0.00 1.99 38.02 2.57
6315 8000 3.610040 TCGTGACAGTAGGCATGAATT 57.390 42.857 0.00 0.00 0.00 2.17
6316 8001 3.937814 TCGTGACAGTAGGCATGAATTT 58.062 40.909 0.00 0.00 0.00 1.82
6317 8002 3.684305 TCGTGACAGTAGGCATGAATTTG 59.316 43.478 0.00 0.00 0.00 2.32
6363 8050 0.397254 TTTTGGGCCAGTTTTCGGGA 60.397 50.000 6.23 0.00 37.34 5.14
6364 8051 0.178947 TTTGGGCCAGTTTTCGGGAT 60.179 50.000 6.23 0.00 37.34 3.85
6366 8053 1.304134 GGGCCAGTTTTCGGGATGT 60.304 57.895 4.39 0.00 37.34 3.06
6410 8106 6.183360 CCACTGTAGCTATCTGGATGCTATAG 60.183 46.154 21.43 21.43 46.61 1.31
6411 8107 5.359576 ACTGTAGCTATCTGGATGCTATAGC 59.640 44.000 18.18 18.18 45.78 2.97
6454 8150 6.347563 CGCAATAAAGCAATGTTTTGTCCATT 60.348 34.615 5.32 0.00 35.17 3.16
6458 8154 4.261578 AGCAATGTTTTGTCCATTCTGG 57.738 40.909 0.00 0.00 34.38 3.86
6459 8155 3.642848 AGCAATGTTTTGTCCATTCTGGT 59.357 39.130 0.00 0.00 34.57 4.00
6468 8164 6.669125 TTTGTCCATTCTGGTGAATTTCAT 57.331 33.333 1.78 0.00 40.61 2.57
6499 8195 9.316730 TGTACGTACTTGTGTAAATTTCTTTCT 57.683 29.630 25.12 0.00 0.00 2.52
6501 8197 7.858583 ACGTACTTGTGTAAATTTCTTTCTCC 58.141 34.615 0.00 0.00 0.00 3.71
6502 8198 7.496591 ACGTACTTGTGTAAATTTCTTTCTCCA 59.503 33.333 0.00 0.00 0.00 3.86
6503 8199 8.009974 CGTACTTGTGTAAATTTCTTTCTCCAG 58.990 37.037 0.00 0.00 0.00 3.86
6504 8200 7.881775 ACTTGTGTAAATTTCTTTCTCCAGT 57.118 32.000 0.00 0.00 0.00 4.00
6505 8201 7.931275 ACTTGTGTAAATTTCTTTCTCCAGTC 58.069 34.615 0.00 0.00 0.00 3.51
6506 8202 7.556275 ACTTGTGTAAATTTCTTTCTCCAGTCA 59.444 33.333 0.00 0.00 0.00 3.41
6507 8203 7.873719 TGTGTAAATTTCTTTCTCCAGTCAA 57.126 32.000 0.00 0.00 0.00 3.18
6508 8204 8.287439 TGTGTAAATTTCTTTCTCCAGTCAAA 57.713 30.769 0.00 0.00 0.00 2.69
6510 8206 9.185192 GTGTAAATTTCTTTCTCCAGTCAAATG 57.815 33.333 0.00 0.00 0.00 2.32
6511 8207 7.867403 TGTAAATTTCTTTCTCCAGTCAAATGC 59.133 33.333 0.00 0.00 0.00 3.56
6512 8208 6.661304 AATTTCTTTCTCCAGTCAAATGCT 57.339 33.333 0.00 0.00 0.00 3.79
6513 8209 5.695851 TTTCTTTCTCCAGTCAAATGCTC 57.304 39.130 0.00 0.00 0.00 4.26
6514 8210 4.356405 TCTTTCTCCAGTCAAATGCTCA 57.644 40.909 0.00 0.00 0.00 4.26
6515 8211 4.321718 TCTTTCTCCAGTCAAATGCTCAG 58.678 43.478 0.00 0.00 0.00 3.35
6519 8215 5.682234 TCTCCAGTCAAATGCTCAGATTA 57.318 39.130 0.00 0.00 0.00 1.75
6524 8220 8.125978 TCCAGTCAAATGCTCAGATTATTTTT 57.874 30.769 0.00 0.00 0.00 1.94
6529 8225 9.852091 GTCAAATGCTCAGATTATTTTTCTTCT 57.148 29.630 0.00 0.00 0.00 2.85
6698 8501 3.088532 AGCAGTGTTCAGGAGAGAGTAG 58.911 50.000 0.00 0.00 0.00 2.57
6748 8551 1.973515 TCTCTTGATGTGGAGCAGTGT 59.026 47.619 0.00 0.00 0.00 3.55
6769 8572 3.368843 GTGGCAATCAAAATTACTGCAGC 59.631 43.478 15.27 0.00 0.00 5.25
6808 8617 6.208402 TGAATGAATCGGAATGAAAACCAAGA 59.792 34.615 0.00 0.00 0.00 3.02
6825 8634 4.162690 ATTCTCGCGGACCCAGCC 62.163 66.667 6.13 0.00 0.00 4.85
6837 8646 0.988678 ACCCAGCCTACCATTCCTCC 60.989 60.000 0.00 0.00 0.00 4.30
6839 8648 0.181350 CCAGCCTACCATTCCTCCAC 59.819 60.000 0.00 0.00 0.00 4.02
6879 8690 4.648626 GCTCACAGCCCACAGCCA 62.649 66.667 0.00 0.00 45.47 4.75
6900 8711 2.039624 GACCTCAGCCCCTCCTCA 59.960 66.667 0.00 0.00 0.00 3.86
6920 8738 1.450531 CGAATGGGAATGGCCAGAGC 61.451 60.000 13.05 2.19 38.95 4.09
6951 8769 3.533079 TAGTCCCACCTCGGCCACA 62.533 63.158 2.24 0.00 0.00 4.17
6955 8773 3.625897 CCACCTCGGCCACACAGA 61.626 66.667 2.24 0.00 0.00 3.41
7061 8879 1.381165 GCCTCGTGTTGTGGTGGTTT 61.381 55.000 0.00 0.00 33.61 3.27
7068 8886 1.088306 GTTGTGGTGGTTTCGTGTGA 58.912 50.000 0.00 0.00 0.00 3.58
7069 8887 1.088306 TTGTGGTGGTTTCGTGTGAC 58.912 50.000 0.00 0.00 0.00 3.67
7070 8888 0.745128 TGTGGTGGTTTCGTGTGACC 60.745 55.000 0.00 0.00 36.45 4.02
7071 8889 1.153127 TGGTGGTTTCGTGTGACCC 60.153 57.895 0.00 0.00 34.99 4.46
7072 8890 1.153127 GGTGGTTTCGTGTGACCCA 60.153 57.895 0.00 0.00 34.99 4.51
7073 8891 0.748729 GGTGGTTTCGTGTGACCCAA 60.749 55.000 0.00 0.00 34.99 4.12
7074 8892 0.661020 GTGGTTTCGTGTGACCCAAG 59.339 55.000 0.00 0.00 34.99 3.61
7075 8893 0.253610 TGGTTTCGTGTGACCCAAGT 59.746 50.000 0.00 0.00 34.99 3.16
7076 8894 0.661020 GGTTTCGTGTGACCCAAGTG 59.339 55.000 0.00 0.00 0.00 3.16
7077 8895 1.658994 GTTTCGTGTGACCCAAGTGA 58.341 50.000 0.00 0.00 0.00 3.41
7078 8896 2.011222 GTTTCGTGTGACCCAAGTGAA 58.989 47.619 0.00 0.00 0.00 3.18
7079 8897 2.404923 TTCGTGTGACCCAAGTGAAA 57.595 45.000 0.00 0.00 0.00 2.69
7080 8898 2.404923 TCGTGTGACCCAAGTGAAAA 57.595 45.000 0.00 0.00 0.00 2.29
7081 8899 2.011222 TCGTGTGACCCAAGTGAAAAC 58.989 47.619 0.00 0.00 0.00 2.43
7082 8900 1.267832 CGTGTGACCCAAGTGAAAACG 60.268 52.381 0.00 0.00 0.00 3.60
7083 8901 2.011222 GTGTGACCCAAGTGAAAACGA 58.989 47.619 0.00 0.00 0.00 3.85
7084 8902 2.420722 GTGTGACCCAAGTGAAAACGAA 59.579 45.455 0.00 0.00 0.00 3.85
7085 8903 3.082548 TGTGACCCAAGTGAAAACGAAA 58.917 40.909 0.00 0.00 0.00 3.46
7086 8904 3.697045 TGTGACCCAAGTGAAAACGAAAT 59.303 39.130 0.00 0.00 0.00 2.17
7087 8905 4.158764 TGTGACCCAAGTGAAAACGAAATT 59.841 37.500 0.00 0.00 0.00 1.82
7088 8906 4.502645 GTGACCCAAGTGAAAACGAAATTG 59.497 41.667 0.00 0.00 0.00 2.32
7089 8907 3.453424 ACCCAAGTGAAAACGAAATTGC 58.547 40.909 0.00 0.00 0.00 3.56
7090 8908 3.132111 ACCCAAGTGAAAACGAAATTGCT 59.868 39.130 0.00 0.00 0.00 3.91
7091 8909 3.735746 CCCAAGTGAAAACGAAATTGCTC 59.264 43.478 0.00 0.00 0.00 4.26
7092 8910 3.735746 CCAAGTGAAAACGAAATTGCTCC 59.264 43.478 0.00 0.00 0.00 4.70
7093 8911 4.358851 CAAGTGAAAACGAAATTGCTCCA 58.641 39.130 0.00 0.00 0.00 3.86
7094 8912 4.853924 AGTGAAAACGAAATTGCTCCAT 57.146 36.364 0.00 0.00 0.00 3.41
7095 8913 4.549458 AGTGAAAACGAAATTGCTCCATG 58.451 39.130 0.00 0.00 0.00 3.66
7096 8914 3.674753 GTGAAAACGAAATTGCTCCATGG 59.325 43.478 4.97 4.97 0.00 3.66
7097 8915 3.571828 TGAAAACGAAATTGCTCCATGGA 59.428 39.130 15.27 15.27 0.00 3.41
7098 8916 3.575965 AAACGAAATTGCTCCATGGAC 57.424 42.857 11.44 8.83 0.00 4.02
7099 8917 1.086696 ACGAAATTGCTCCATGGACG 58.913 50.000 11.44 13.61 0.00 4.79
7100 8918 1.338674 ACGAAATTGCTCCATGGACGA 60.339 47.619 21.33 14.02 0.00 4.20
7101 8919 1.062587 CGAAATTGCTCCATGGACGAC 59.937 52.381 11.44 3.91 0.00 4.34
7102 8920 2.083774 GAAATTGCTCCATGGACGACA 58.916 47.619 11.44 6.81 0.00 4.35
7103 8921 1.453155 AATTGCTCCATGGACGACAC 58.547 50.000 11.44 0.00 0.00 3.67
7104 8922 0.740868 ATTGCTCCATGGACGACACG 60.741 55.000 11.44 0.49 0.00 4.49
7105 8923 1.811645 TTGCTCCATGGACGACACGA 61.812 55.000 11.44 0.00 0.00 4.35
7106 8924 1.141881 GCTCCATGGACGACACGAT 59.858 57.895 11.44 0.00 0.00 3.73
7107 8925 0.872021 GCTCCATGGACGACACGATC 60.872 60.000 11.44 0.00 0.00 3.69
7108 8926 0.741326 CTCCATGGACGACACGATCT 59.259 55.000 11.44 0.00 0.00 2.75
7109 8927 0.455815 TCCATGGACGACACGATCTG 59.544 55.000 11.44 0.00 0.00 2.90
7110 8928 1.148157 CCATGGACGACACGATCTGC 61.148 60.000 5.56 0.00 0.00 4.26
7111 8929 0.458370 CATGGACGACACGATCTGCA 60.458 55.000 0.00 0.00 0.00 4.41
7112 8930 0.458543 ATGGACGACACGATCTGCAC 60.459 55.000 0.00 0.00 0.00 4.57
7113 8931 2.152699 GGACGACACGATCTGCACG 61.153 63.158 0.00 0.00 0.00 5.34
7114 8932 1.154282 GACGACACGATCTGCACGA 60.154 57.895 1.86 0.00 34.70 4.35
7115 8933 0.523546 GACGACACGATCTGCACGAT 60.524 55.000 1.86 0.37 34.25 3.73
7116 8934 0.523546 ACGACACGATCTGCACGATC 60.524 55.000 13.18 13.18 44.16 3.69
7117 8935 0.248255 CGACACGATCTGCACGATCT 60.248 55.000 18.07 5.73 45.19 2.75
7118 8936 1.003866 CGACACGATCTGCACGATCTA 60.004 52.381 18.07 0.00 45.19 1.98
7119 8937 2.376956 GACACGATCTGCACGATCTAC 58.623 52.381 18.07 7.92 45.19 2.59
7120 8938 1.268083 ACACGATCTGCACGATCTACG 60.268 52.381 18.07 11.58 45.19 3.51
7121 8939 0.308068 ACGATCTGCACGATCTACGG 59.692 55.000 18.07 9.34 45.19 4.02
7122 8940 0.586802 CGATCTGCACGATCTACGGA 59.413 55.000 18.07 0.00 45.19 4.69
7123 8941 1.660614 CGATCTGCACGATCTACGGAC 60.661 57.143 18.07 0.00 45.19 4.79
7124 8942 1.660614 GATCTGCACGATCTACGGACG 60.661 57.143 14.99 0.00 44.21 4.79
7125 8943 3.938628 GATCTGCACGATCTACGGACGA 61.939 54.545 14.99 0.00 44.21 4.20
7126 8944 5.946284 GATCTGCACGATCTACGGACGAC 62.946 56.522 14.99 0.00 44.21 4.34
7129 8947 4.991760 CGATCTACGGACGACACC 57.008 61.111 0.00 0.00 38.46 4.16
7130 8948 2.391469 CGATCTACGGACGACACCT 58.609 57.895 0.00 0.00 38.46 4.00
7131 8949 0.731417 CGATCTACGGACGACACCTT 59.269 55.000 0.00 0.00 38.46 3.50
7132 8950 1.267932 CGATCTACGGACGACACCTTC 60.268 57.143 0.00 0.00 38.46 3.46
7133 8951 1.065251 GATCTACGGACGACACCTTCC 59.935 57.143 0.00 0.00 0.00 3.46
7134 8952 0.037303 TCTACGGACGACACCTTCCT 59.963 55.000 0.00 0.00 0.00 3.36
7135 8953 0.886563 CTACGGACGACACCTTCCTT 59.113 55.000 0.00 0.00 0.00 3.36
7136 8954 0.883833 TACGGACGACACCTTCCTTC 59.116 55.000 0.00 0.00 0.00 3.46
7137 8955 1.080025 CGGACGACACCTTCCTTCC 60.080 63.158 0.00 0.00 0.00 3.46
7138 8956 1.295746 GGACGACACCTTCCTTCCC 59.704 63.158 0.00 0.00 0.00 3.97
7139 8957 1.477685 GGACGACACCTTCCTTCCCA 61.478 60.000 0.00 0.00 0.00 4.37
7140 8958 0.395312 GACGACACCTTCCTTCCCAA 59.605 55.000 0.00 0.00 0.00 4.12
7141 8959 0.108019 ACGACACCTTCCTTCCCAAC 59.892 55.000 0.00 0.00 0.00 3.77
7142 8960 0.107831 CGACACCTTCCTTCCCAACA 59.892 55.000 0.00 0.00 0.00 3.33
7143 8961 1.878102 CGACACCTTCCTTCCCAACAG 60.878 57.143 0.00 0.00 0.00 3.16
7144 8962 0.178990 ACACCTTCCTTCCCAACAGC 60.179 55.000 0.00 0.00 0.00 4.40
7145 8963 1.073199 ACCTTCCTTCCCAACAGCG 59.927 57.895 0.00 0.00 0.00 5.18
7146 8964 2.335712 CCTTCCTTCCCAACAGCGC 61.336 63.158 0.00 0.00 0.00 5.92
7147 8965 1.302832 CTTCCTTCCCAACAGCGCT 60.303 57.895 2.64 2.64 0.00 5.92
7148 8966 0.036388 CTTCCTTCCCAACAGCGCTA 60.036 55.000 10.99 0.00 0.00 4.26
7149 8967 0.036388 TTCCTTCCCAACAGCGCTAG 60.036 55.000 10.99 7.53 0.00 3.42
7150 8968 1.450312 CCTTCCCAACAGCGCTAGG 60.450 63.158 10.99 12.94 0.00 3.02
7151 8969 2.046314 TTCCCAACAGCGCTAGGC 60.046 61.111 10.99 0.00 44.05 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.826715 CAAGAGGAAGATGAGCGGGA 59.173 55.000 0.00 0.00 0.00 5.14
1 2 0.826715 TCAAGAGGAAGATGAGCGGG 59.173 55.000 0.00 0.00 0.00 6.13
2 3 2.364970 AGATCAAGAGGAAGATGAGCGG 59.635 50.000 0.00 0.00 34.82 5.52
3 4 3.067883 TCAGATCAAGAGGAAGATGAGCG 59.932 47.826 0.00 0.00 34.82 5.03
4 5 4.370917 GTCAGATCAAGAGGAAGATGAGC 58.629 47.826 0.00 0.00 0.00 4.26
5 6 4.405036 TGGTCAGATCAAGAGGAAGATGAG 59.595 45.833 0.00 0.00 0.00 2.90
6 7 4.161189 GTGGTCAGATCAAGAGGAAGATGA 59.839 45.833 0.00 0.00 0.00 2.92
7 8 4.440880 GTGGTCAGATCAAGAGGAAGATG 58.559 47.826 0.00 0.00 0.00 2.90
8 9 3.454082 GGTGGTCAGATCAAGAGGAAGAT 59.546 47.826 0.00 0.00 0.00 2.40
9 10 2.834549 GGTGGTCAGATCAAGAGGAAGA 59.165 50.000 0.00 0.00 0.00 2.87
10 11 2.836981 AGGTGGTCAGATCAAGAGGAAG 59.163 50.000 0.00 0.00 0.00 3.46
11 12 2.834549 GAGGTGGTCAGATCAAGAGGAA 59.165 50.000 0.00 0.00 0.00 3.36
12 13 2.461695 GAGGTGGTCAGATCAAGAGGA 58.538 52.381 0.00 0.00 0.00 3.71
13 14 1.135915 CGAGGTGGTCAGATCAAGAGG 59.864 57.143 0.00 0.00 0.00 3.69
14 15 1.470632 GCGAGGTGGTCAGATCAAGAG 60.471 57.143 0.00 0.00 0.00 2.85
15 16 0.532573 GCGAGGTGGTCAGATCAAGA 59.467 55.000 0.00 0.00 0.00 3.02
16 17 0.803768 CGCGAGGTGGTCAGATCAAG 60.804 60.000 0.00 0.00 0.00 3.02
17 18 1.215382 CGCGAGGTGGTCAGATCAA 59.785 57.895 0.00 0.00 0.00 2.57
18 19 1.934220 GACGCGAGGTGGTCAGATCA 61.934 60.000 15.93 0.00 33.41 2.92
19 20 1.226717 GACGCGAGGTGGTCAGATC 60.227 63.158 15.93 0.00 33.41 2.75
20 21 1.977009 TGACGCGAGGTGGTCAGAT 60.977 57.895 15.93 0.00 38.19 2.90
21 22 2.596338 TGACGCGAGGTGGTCAGA 60.596 61.111 15.93 0.00 38.19 3.27
23 24 4.357947 GCTGACGCGAGGTGGTCA 62.358 66.667 15.93 3.42 40.63 4.02
42 43 0.106894 ATACTTTAGGCTGGCCTCGC 59.893 55.000 18.06 6.69 44.43 5.03
43 44 1.689273 AGATACTTTAGGCTGGCCTCG 59.311 52.381 18.06 10.13 44.43 4.63
44 45 2.436173 ACAGATACTTTAGGCTGGCCTC 59.564 50.000 18.06 2.13 44.43 4.70
46 47 2.565841 CACAGATACTTTAGGCTGGCC 58.434 52.381 3.00 3.00 32.82 5.36
47 48 2.565841 CCACAGATACTTTAGGCTGGC 58.434 52.381 0.00 0.00 32.82 4.85
48 49 2.158755 CCCCACAGATACTTTAGGCTGG 60.159 54.545 0.00 0.00 32.82 4.85
49 50 2.505819 ACCCCACAGATACTTTAGGCTG 59.494 50.000 0.00 0.00 34.65 4.85
50 51 2.772515 GACCCCACAGATACTTTAGGCT 59.227 50.000 0.00 0.00 0.00 4.58
51 52 2.504175 TGACCCCACAGATACTTTAGGC 59.496 50.000 0.00 0.00 0.00 3.93
52 53 4.837093 TTGACCCCACAGATACTTTAGG 57.163 45.455 0.00 0.00 0.00 2.69
53 54 5.126067 CCATTGACCCCACAGATACTTTAG 58.874 45.833 0.00 0.00 0.00 1.85
54 55 4.538490 ACCATTGACCCCACAGATACTTTA 59.462 41.667 0.00 0.00 0.00 1.85
55 56 3.333680 ACCATTGACCCCACAGATACTTT 59.666 43.478 0.00 0.00 0.00 2.66
56 57 2.919602 ACCATTGACCCCACAGATACTT 59.080 45.455 0.00 0.00 0.00 2.24
57 58 2.562296 ACCATTGACCCCACAGATACT 58.438 47.619 0.00 0.00 0.00 2.12
58 59 4.706842 ATACCATTGACCCCACAGATAC 57.293 45.455 0.00 0.00 0.00 2.24
59 60 5.044476 ACAAATACCATTGACCCCACAGATA 60.044 40.000 0.00 0.00 34.38 1.98
60 61 4.264352 ACAAATACCATTGACCCCACAGAT 60.264 41.667 0.00 0.00 34.38 2.90
61 62 3.075283 ACAAATACCATTGACCCCACAGA 59.925 43.478 0.00 0.00 34.38 3.41
62 63 3.430453 ACAAATACCATTGACCCCACAG 58.570 45.455 0.00 0.00 34.38 3.66
63 64 3.534357 ACAAATACCATTGACCCCACA 57.466 42.857 0.00 0.00 34.38 4.17
64 65 3.056179 CCAACAAATACCATTGACCCCAC 60.056 47.826 0.00 0.00 34.38 4.61
65 66 3.169099 CCAACAAATACCATTGACCCCA 58.831 45.455 0.00 0.00 34.38 4.96
66 67 3.436243 TCCAACAAATACCATTGACCCC 58.564 45.455 0.00 0.00 34.38 4.95
67 68 5.675684 AATCCAACAAATACCATTGACCC 57.324 39.130 0.00 0.00 34.38 4.46
68 69 7.977789 AAAAATCCAACAAATACCATTGACC 57.022 32.000 0.00 0.00 34.38 4.02
93 94 9.554395 TGTTCAATTACTGTTCATACTGAAGAA 57.446 29.630 0.00 0.00 37.00 2.52
94 95 9.208022 CTGTTCAATTACTGTTCATACTGAAGA 57.792 33.333 0.00 0.00 37.00 2.87
95 96 8.993121 ACTGTTCAATTACTGTTCATACTGAAG 58.007 33.333 0.00 0.00 37.00 3.02
96 97 8.773645 CACTGTTCAATTACTGTTCATACTGAA 58.226 33.333 0.00 0.00 33.32 3.02
97 98 7.931407 ACACTGTTCAATTACTGTTCATACTGA 59.069 33.333 0.00 0.00 0.00 3.41
98 99 8.087982 ACACTGTTCAATTACTGTTCATACTG 57.912 34.615 0.00 0.00 0.00 2.74
99 100 8.677148 AACACTGTTCAATTACTGTTCATACT 57.323 30.769 0.00 0.00 0.00 2.12
100 101 9.730420 AAAACACTGTTCAATTACTGTTCATAC 57.270 29.630 0.00 0.00 0.00 2.39
103 104 9.781834 CTAAAAACACTGTTCAATTACTGTTCA 57.218 29.630 0.00 0.00 0.00 3.18
104 105 9.233232 CCTAAAAACACTGTTCAATTACTGTTC 57.767 33.333 0.00 0.00 0.00 3.18
105 106 7.704899 GCCTAAAAACACTGTTCAATTACTGTT 59.295 33.333 0.00 0.00 0.00 3.16
106 107 7.068226 AGCCTAAAAACACTGTTCAATTACTGT 59.932 33.333 0.00 0.00 0.00 3.55
107 108 7.425606 AGCCTAAAAACACTGTTCAATTACTG 58.574 34.615 0.00 0.00 0.00 2.74
108 109 7.582667 AGCCTAAAAACACTGTTCAATTACT 57.417 32.000 0.00 0.00 0.00 2.24
109 110 9.908152 ATTAGCCTAAAAACACTGTTCAATTAC 57.092 29.630 0.00 0.00 0.00 1.89
111 112 9.830975 AAATTAGCCTAAAAACACTGTTCAATT 57.169 25.926 0.00 0.00 0.00 2.32
112 113 9.830975 AAAATTAGCCTAAAAACACTGTTCAAT 57.169 25.926 0.00 0.00 0.00 2.57
113 114 9.308318 GAAAATTAGCCTAAAAACACTGTTCAA 57.692 29.630 0.00 0.00 0.00 2.69
114 115 8.691797 AGAAAATTAGCCTAAAAACACTGTTCA 58.308 29.630 0.00 0.00 0.00 3.18
125 126 9.691362 CACAGCTTTTTAGAAAATTAGCCTAAA 57.309 29.630 7.48 0.00 34.07 1.85
126 127 8.303876 CCACAGCTTTTTAGAAAATTAGCCTAA 58.696 33.333 7.48 0.00 34.07 2.69
127 128 7.093945 CCCACAGCTTTTTAGAAAATTAGCCTA 60.094 37.037 7.48 0.00 34.07 3.93
128 129 6.295292 CCCACAGCTTTTTAGAAAATTAGCCT 60.295 38.462 7.48 0.00 34.07 4.58
129 130 5.869344 CCCACAGCTTTTTAGAAAATTAGCC 59.131 40.000 7.48 0.00 34.07 3.93
130 131 5.869344 CCCCACAGCTTTTTAGAAAATTAGC 59.131 40.000 4.07 4.07 33.87 3.09
131 132 6.993079 ACCCCACAGCTTTTTAGAAAATTAG 58.007 36.000 0.00 0.00 0.00 1.73
132 133 6.551601 TGACCCCACAGCTTTTTAGAAAATTA 59.448 34.615 0.00 0.00 0.00 1.40
133 134 5.365314 TGACCCCACAGCTTTTTAGAAAATT 59.635 36.000 0.00 0.00 0.00 1.82
134 135 4.898861 TGACCCCACAGCTTTTTAGAAAAT 59.101 37.500 0.00 0.00 0.00 1.82
135 136 4.282496 TGACCCCACAGCTTTTTAGAAAA 58.718 39.130 0.00 0.00 0.00 2.29
136 137 3.904717 TGACCCCACAGCTTTTTAGAAA 58.095 40.909 0.00 0.00 0.00 2.52
137 138 3.586470 TGACCCCACAGCTTTTTAGAA 57.414 42.857 0.00 0.00 0.00 2.10
138 139 3.117663 AGTTGACCCCACAGCTTTTTAGA 60.118 43.478 0.00 0.00 0.00 2.10
139 140 3.004734 CAGTTGACCCCACAGCTTTTTAG 59.995 47.826 0.00 0.00 0.00 1.85
140 141 2.955660 CAGTTGACCCCACAGCTTTTTA 59.044 45.455 0.00 0.00 0.00 1.52
141 142 1.756538 CAGTTGACCCCACAGCTTTTT 59.243 47.619 0.00 0.00 0.00 1.94
142 143 1.064017 TCAGTTGACCCCACAGCTTTT 60.064 47.619 0.00 0.00 0.00 2.27
143 144 0.550914 TCAGTTGACCCCACAGCTTT 59.449 50.000 0.00 0.00 0.00 3.51
144 145 0.179018 GTCAGTTGACCCCACAGCTT 60.179 55.000 0.72 0.00 39.07 3.74
145 146 1.451936 GTCAGTTGACCCCACAGCT 59.548 57.895 0.72 0.00 39.07 4.24
146 147 4.065110 GTCAGTTGACCCCACAGC 57.935 61.111 0.72 0.00 39.07 4.40
154 155 0.759346 AGTCTGTGGGGTCAGTTGAC 59.241 55.000 3.67 3.67 44.04 3.18
155 156 2.367567 GTTAGTCTGTGGGGTCAGTTGA 59.632 50.000 0.00 0.00 36.85 3.18
156 157 2.104111 TGTTAGTCTGTGGGGTCAGTTG 59.896 50.000 0.00 0.00 36.85 3.16
157 158 2.104281 GTGTTAGTCTGTGGGGTCAGTT 59.896 50.000 0.00 0.00 36.85 3.16
158 159 1.692519 GTGTTAGTCTGTGGGGTCAGT 59.307 52.381 0.00 0.00 36.85 3.41
159 160 1.002087 GGTGTTAGTCTGTGGGGTCAG 59.998 57.143 0.00 0.00 36.85 3.51
160 161 1.053424 GGTGTTAGTCTGTGGGGTCA 58.947 55.000 0.00 0.00 0.00 4.02
161 162 1.349067 AGGTGTTAGTCTGTGGGGTC 58.651 55.000 0.00 0.00 0.00 4.46
162 163 2.537143 CTAGGTGTTAGTCTGTGGGGT 58.463 52.381 0.00 0.00 0.00 4.95
163 164 1.207329 GCTAGGTGTTAGTCTGTGGGG 59.793 57.143 0.00 0.00 0.00 4.96
164 165 2.180276 AGCTAGGTGTTAGTCTGTGGG 58.820 52.381 0.00 0.00 0.00 4.61
165 166 3.673594 CGAAGCTAGGTGTTAGTCTGTGG 60.674 52.174 0.00 0.00 0.00 4.17
166 167 3.502920 CGAAGCTAGGTGTTAGTCTGTG 58.497 50.000 0.00 0.00 0.00 3.66
167 168 3.851976 CGAAGCTAGGTGTTAGTCTGT 57.148 47.619 0.00 0.00 0.00 3.41
189 190 4.814294 GTGGTACGCGAGGCAGGG 62.814 72.222 15.93 0.00 0.00 4.45
190 191 4.814294 GGTGGTACGCGAGGCAGG 62.814 72.222 15.93 0.00 41.51 4.85
199 200 4.360964 TGTTCGGCCGGTGGTACG 62.361 66.667 27.83 0.00 0.00 3.67
200 201 2.433664 CTGTTCGGCCGGTGGTAC 60.434 66.667 27.83 15.65 0.00 3.34
201 202 4.382320 GCTGTTCGGCCGGTGGTA 62.382 66.667 27.83 1.12 0.00 3.25
211 212 3.423154 GTGGAAGCCGGCTGTTCG 61.423 66.667 33.60 0.00 0.00 3.95
212 213 3.056328 GGTGGAAGCCGGCTGTTC 61.056 66.667 33.60 24.87 0.00 3.18
213 214 3.553095 GAGGTGGAAGCCGGCTGTT 62.553 63.158 33.60 16.85 32.25 3.16
214 215 4.021925 GAGGTGGAAGCCGGCTGT 62.022 66.667 33.60 20.42 32.25 4.40
215 216 4.785453 GGAGGTGGAAGCCGGCTG 62.785 72.222 33.60 0.00 32.25 4.85
284 285 4.499116 AGGGATGTCCGGGGGAGG 62.499 72.222 0.00 0.00 41.52 4.30
285 286 2.020100 TAGAGGGATGTCCGGGGGAG 62.020 65.000 0.00 0.00 41.52 4.30
286 287 2.016315 TAGAGGGATGTCCGGGGGA 61.016 63.158 0.00 0.00 41.52 4.81
287 288 1.534235 CTAGAGGGATGTCCGGGGG 60.534 68.421 0.00 0.00 41.52 5.40
288 289 2.210711 GCTAGAGGGATGTCCGGGG 61.211 68.421 0.00 0.00 41.52 5.73
289 290 2.210711 GGCTAGAGGGATGTCCGGG 61.211 68.421 0.00 0.00 41.52 5.73
290 291 2.210711 GGGCTAGAGGGATGTCCGG 61.211 68.421 0.00 0.00 41.52 5.14
291 292 2.210711 GGGGCTAGAGGGATGTCCG 61.211 68.421 0.00 0.00 41.52 4.79
292 293 2.210711 CGGGGCTAGAGGGATGTCC 61.211 68.421 0.00 0.00 0.00 4.02
293 294 2.210711 CCGGGGCTAGAGGGATGTC 61.211 68.421 0.00 0.00 0.00 3.06
294 295 2.122813 CCGGGGCTAGAGGGATGT 60.123 66.667 0.00 0.00 0.00 3.06
295 296 3.631046 GCCGGGGCTAGAGGGATG 61.631 72.222 2.18 0.00 38.26 3.51
306 307 3.659089 ATCAAAGTCGACGCCGGGG 62.659 63.158 18.33 18.33 36.24 5.73
307 308 1.296056 AAATCAAAGTCGACGCCGGG 61.296 55.000 10.46 0.00 36.24 5.73
308 309 0.515564 AAAATCAAAGTCGACGCCGG 59.484 50.000 10.46 0.00 36.24 6.13
309 310 1.463528 GGAAAATCAAAGTCGACGCCG 60.464 52.381 10.46 2.23 37.07 6.46
310 311 1.533731 TGGAAAATCAAAGTCGACGCC 59.466 47.619 10.46 2.73 0.00 5.68
311 312 2.571206 GTGGAAAATCAAAGTCGACGC 58.429 47.619 10.46 0.00 0.00 5.19
312 313 2.411031 CCGTGGAAAATCAAAGTCGACG 60.411 50.000 10.46 0.00 41.39 5.12
313 314 2.664698 GCCGTGGAAAATCAAAGTCGAC 60.665 50.000 7.70 7.70 0.00 4.20
314 315 1.533731 GCCGTGGAAAATCAAAGTCGA 59.466 47.619 0.00 0.00 0.00 4.20
315 316 1.724654 CGCCGTGGAAAATCAAAGTCG 60.725 52.381 0.00 0.00 0.00 4.18
316 317 1.533731 TCGCCGTGGAAAATCAAAGTC 59.466 47.619 0.00 0.00 0.00 3.01
317 318 1.265905 GTCGCCGTGGAAAATCAAAGT 59.734 47.619 0.00 0.00 0.00 2.66
318 319 1.401018 GGTCGCCGTGGAAAATCAAAG 60.401 52.381 0.00 0.00 0.00 2.77
319 320 0.594110 GGTCGCCGTGGAAAATCAAA 59.406 50.000 0.00 0.00 0.00 2.69
320 321 0.250553 AGGTCGCCGTGGAAAATCAA 60.251 50.000 0.00 0.00 0.00 2.57
321 322 0.250553 AAGGTCGCCGTGGAAAATCA 60.251 50.000 0.00 0.00 0.00 2.57
322 323 0.168128 CAAGGTCGCCGTGGAAAATC 59.832 55.000 4.40 0.00 29.60 2.17
323 324 1.862602 GCAAGGTCGCCGTGGAAAAT 61.863 55.000 12.08 0.00 33.72 1.82
324 325 2.548295 GCAAGGTCGCCGTGGAAAA 61.548 57.895 12.08 0.00 33.72 2.29
325 326 2.975799 GCAAGGTCGCCGTGGAAA 60.976 61.111 12.08 0.00 33.72 3.13
326 327 4.243008 TGCAAGGTCGCCGTGGAA 62.243 61.111 12.08 0.00 33.72 3.53
327 328 4.980805 GTGCAAGGTCGCCGTGGA 62.981 66.667 12.08 7.66 33.72 4.02
330 331 4.329545 ATGGTGCAAGGTCGCCGT 62.330 61.111 0.00 0.00 39.42 5.68
397 398 5.955355 GCTACCTCACCATCTATCTTAGGAT 59.045 44.000 0.00 0.00 36.07 3.24
398 399 5.326069 GCTACCTCACCATCTATCTTAGGA 58.674 45.833 0.00 0.00 0.00 2.94
504 507 2.069273 ACACGTCAGCTAAATGTCAGC 58.931 47.619 0.00 0.00 39.41 4.26
668 681 0.034059 CGCTGGAGTCTGGACTTGTT 59.966 55.000 4.67 0.00 42.66 2.83
669 682 1.668294 CGCTGGAGTCTGGACTTGT 59.332 57.895 4.67 0.00 42.66 3.16
792 838 3.006110 CAGGCCAAGAAAATGCAGAGAAA 59.994 43.478 5.01 0.00 0.00 2.52
970 1027 1.472480 CCGATTCCGACCTGCAAAATT 59.528 47.619 0.00 0.00 38.22 1.82
984 1041 1.895707 CATGGCAGCTCCCCGATTC 60.896 63.158 0.00 0.00 0.00 2.52
986 1043 3.882326 CCATGGCAGCTCCCCGAT 61.882 66.667 0.00 0.00 0.00 4.18
1009 1066 1.153289 CTCTGGGGCCGATGTTCTG 60.153 63.158 0.00 0.00 0.00 3.02
1032 1089 0.955919 GAGGAACAAGGAAGCGGGTG 60.956 60.000 0.00 0.00 0.00 4.61
1052 1109 0.167689 GATACGATACGGGGCGAGAC 59.832 60.000 0.00 0.00 0.00 3.36
1066 1133 5.465390 TCAGAAGAACACAAACTTGGATACG 59.535 40.000 0.00 0.00 42.51 3.06
1123 1190 4.213564 AGTAAGAAGGAGCTCATTGTGG 57.786 45.455 19.88 0.00 0.00 4.17
1169 1253 8.061857 TGCAGATCGTCGTCAATTTTTATTATC 58.938 33.333 0.00 0.00 0.00 1.75
1171 1255 7.148557 TGTGCAGATCGTCGTCAATTTTTATTA 60.149 33.333 0.00 0.00 0.00 0.98
1173 1257 5.121611 TGTGCAGATCGTCGTCAATTTTTAT 59.878 36.000 0.00 0.00 0.00 1.40
1185 1270 1.512926 ACACCTTTGTGCAGATCGTC 58.487 50.000 0.00 0.00 46.86 4.20
1225 1310 0.037326 CATCACGCCACACCAGTAGT 60.037 55.000 0.00 0.00 0.00 2.73
1226 1311 0.037326 ACATCACGCCACACCAGTAG 60.037 55.000 0.00 0.00 0.00 2.57
1357 1488 6.428159 AGTTACTAACTGCAGCATATATTGCC 59.572 38.462 15.27 0.00 46.13 4.52
1487 1630 2.609244 GCTGATCTCACCTTCGATAGCC 60.609 54.545 0.00 0.00 0.00 3.93
1740 1886 2.098934 AGATGCGCAAACTTTGTTGACA 59.901 40.909 17.11 0.00 0.00 3.58
1782 1928 4.389992 CGGATTATACAGGCATGATCACAC 59.610 45.833 4.84 0.00 0.00 3.82
1788 1934 2.766313 GCACGGATTATACAGGCATGA 58.234 47.619 4.84 0.00 0.00 3.07
1804 1950 3.047796 AGTTACAGAAACTGTACGCACG 58.952 45.455 10.53 0.00 46.90 5.34
1832 1981 1.385528 ACAGGACCACGGTTCAAAAC 58.614 50.000 0.00 0.00 0.00 2.43
1838 1987 0.466739 GGGAAAACAGGACCACGGTT 60.467 55.000 0.00 0.00 39.22 4.44
1842 1991 4.513777 GGGGGAAAACAGGACCAC 57.486 61.111 0.00 0.00 0.00 4.16
1856 2005 2.679716 CTGCAGAAAGGGAGGGGG 59.320 66.667 8.42 0.00 0.00 5.40
1901 2055 4.169059 ACAATATCATTGCTGCCCAGTA 57.831 40.909 0.00 0.00 0.00 2.74
2010 2164 5.491070 TGAACTTCAGCTATGCACTACATT 58.509 37.500 0.00 0.00 40.38 2.71
2071 2225 4.213564 TCTTGGCATTCTCTTTCTCCTC 57.786 45.455 0.00 0.00 0.00 3.71
2104 2258 4.165779 CACAAGGTGTCAAACAAACTGTC 58.834 43.478 0.00 0.00 0.00 3.51
2155 2334 5.333798 GCTGAGTAATTTGTTCGTGTAGCAA 60.334 40.000 0.00 0.00 0.00 3.91
2200 2410 8.950403 TTATGTATCGATTCTAACAGATCACG 57.050 34.615 1.71 0.00 0.00 4.35
2238 2468 8.091449 GCAAGAAGTATAAGAGGCATACACTAT 58.909 37.037 0.00 0.00 32.35 2.12
2254 2484 2.200373 AAGTTGCCGGCAAGAAGTAT 57.800 45.000 40.97 20.23 36.52 2.12
2258 2488 1.202710 TCACTAAGTTGCCGGCAAGAA 60.203 47.619 40.97 26.48 36.52 2.52
2400 2630 2.096013 CAGAGCATGATTGTCAGCACAG 59.904 50.000 0.00 0.00 32.71 3.66
2565 2802 3.370104 ACCAACTTTCCATGTGTTCCAA 58.630 40.909 0.00 0.00 0.00 3.53
2566 2803 2.955660 GACCAACTTTCCATGTGTTCCA 59.044 45.455 0.00 0.00 0.00 3.53
2568 2805 4.918810 AAGACCAACTTTCCATGTGTTC 57.081 40.909 0.00 0.00 34.94 3.18
2575 2812 3.130340 GCACTCAAAAGACCAACTTTCCA 59.870 43.478 0.00 0.00 46.55 3.53
3177 3639 7.243487 CGCTCATTACTTTGAATAGCAAAAGA 58.757 34.615 2.38 0.00 45.26 2.52
3290 3772 8.093927 CAGAGGGCATTAGGAAAACAAATAAAA 58.906 33.333 0.00 0.00 0.00 1.52
3944 4543 6.064717 ACAGAGGACAGCAAGAAAACTAATT 58.935 36.000 0.00 0.00 0.00 1.40
4035 4643 9.620660 GTTAACTGGATTGTAAAAACATACCAG 57.379 33.333 20.01 20.01 42.81 4.00
4202 4810 4.832248 AGACTTGGTCAAATATCGAGCAA 58.168 39.130 15.14 15.14 45.73 3.91
4268 4987 3.118408 TGGTCAAAGCTAATATGCGGAGT 60.118 43.478 0.00 0.00 38.13 3.85
4306 5025 7.547370 TGTTTTTGATAAACTTGGGTCAAACTG 59.453 33.333 0.58 0.00 39.48 3.16
4307 5026 7.616313 TGTTTTTGATAAACTTGGGTCAAACT 58.384 30.769 0.58 0.00 39.48 2.66
4309 5028 7.616313 ACTGTTTTTGATAAACTTGGGTCAAA 58.384 30.769 0.58 0.00 38.41 2.69
4464 5188 5.706916 ACTTTGCATATCAGCTTTGTCTTG 58.293 37.500 0.00 0.00 34.99 3.02
4465 5189 5.972107 ACTTTGCATATCAGCTTTGTCTT 57.028 34.783 0.00 0.00 34.99 3.01
4476 5200 7.591426 CCTCCGCTTTTATTTACTTTGCATATC 59.409 37.037 0.00 0.00 0.00 1.63
4496 5220 5.047235 ACAATGAACTATATACTCCCTCCGC 60.047 44.000 0.00 0.00 0.00 5.54
4497 5221 6.591750 ACAATGAACTATATACTCCCTCCG 57.408 41.667 0.00 0.00 0.00 4.63
4833 5560 8.677300 TCACATATTCAGTTAAATTCTGGCTTC 58.323 33.333 0.00 0.00 34.15 3.86
4834 5561 8.579850 TCACATATTCAGTTAAATTCTGGCTT 57.420 30.769 0.00 0.00 34.15 4.35
4835 5562 8.627403 CATCACATATTCAGTTAAATTCTGGCT 58.373 33.333 0.00 0.00 34.15 4.75
4934 5676 3.439440 AACTTCCAGCCCAAGTTCC 57.561 52.632 0.53 0.00 39.42 3.62
5323 6112 3.434309 ACAGCCTGCAATAAGTGGAAAT 58.566 40.909 0.00 0.00 0.00 2.17
5324 6113 2.875296 ACAGCCTGCAATAAGTGGAAA 58.125 42.857 0.00 0.00 0.00 3.13
5327 6116 1.403249 GCAACAGCCTGCAATAAGTGG 60.403 52.381 0.00 0.00 42.17 4.00
5425 6218 4.627058 CCCCGAAACAAATTTAGCTGTTT 58.373 39.130 5.82 5.82 45.91 2.83
5473 6266 0.676466 AAGATCGGCGTGCATTTCCA 60.676 50.000 6.85 0.00 0.00 3.53
5485 6279 7.710907 TCATGGACAGAAAATAGTAAAGATCGG 59.289 37.037 0.00 0.00 0.00 4.18
5501 6296 7.928167 CACTAATAAATACTGCTCATGGACAGA 59.072 37.037 18.92 6.67 37.35 3.41
5695 6490 3.699894 CAGGAGGCTCTGGCACGT 61.700 66.667 15.23 0.00 40.87 4.49
5696 6491 2.738213 AAACAGGAGGCTCTGGCACG 62.738 60.000 15.23 0.00 40.87 5.34
5697 6492 1.073897 AAACAGGAGGCTCTGGCAC 59.926 57.895 15.23 0.00 40.87 5.01
5698 6493 1.073722 CAAACAGGAGGCTCTGGCA 59.926 57.895 15.23 0.00 40.87 4.92
5709 6504 2.689983 GCAATACCCATCCTCAAACAGG 59.310 50.000 0.00 0.00 45.15 4.00
5710 6505 3.624777 AGCAATACCCATCCTCAAACAG 58.375 45.455 0.00 0.00 0.00 3.16
5790 7414 6.154203 TGAAGATAAGATGTCTGGTGCTAG 57.846 41.667 0.00 0.00 0.00 3.42
5797 7421 8.747471 TCATATAGGCTGAAGATAAGATGTCTG 58.253 37.037 0.00 0.00 0.00 3.51
5846 7475 7.656542 GGTTACAGAGTTAACTAGCAGAAAGTT 59.343 37.037 8.42 0.00 40.25 2.66
5847 7476 7.153315 GGTTACAGAGTTAACTAGCAGAAAGT 58.847 38.462 8.42 1.75 0.00 2.66
5848 7477 6.590677 GGGTTACAGAGTTAACTAGCAGAAAG 59.409 42.308 8.42 0.00 0.00 2.62
5850 7479 5.336213 CGGGTTACAGAGTTAACTAGCAGAA 60.336 44.000 8.42 0.00 0.00 3.02
5852 7481 4.082354 ACGGGTTACAGAGTTAACTAGCAG 60.082 45.833 8.42 5.68 0.00 4.24
5853 7482 3.828451 ACGGGTTACAGAGTTAACTAGCA 59.172 43.478 8.42 0.00 0.00 3.49
5854 7483 4.171754 CACGGGTTACAGAGTTAACTAGC 58.828 47.826 8.42 1.94 0.00 3.42
5855 7484 4.171754 GCACGGGTTACAGAGTTAACTAG 58.828 47.826 8.42 7.04 0.00 2.57
5858 7487 1.723003 CGCACGGGTTACAGAGTTAAC 59.277 52.381 0.00 0.00 0.00 2.01
5859 7488 1.337074 CCGCACGGGTTACAGAGTTAA 60.337 52.381 0.00 0.00 0.00 2.01
5886 7535 8.972262 TCTCAAGTATCGATATGATAAACTGC 57.028 34.615 8.66 0.00 41.17 4.40
5914 7566 1.271934 CTCCTCATATCAGAGTGGGCG 59.728 57.143 0.00 0.00 33.75 6.13
5938 7591 3.750371 TGGTAAGTGAAACCACAGGATG 58.250 45.455 0.00 0.00 42.10 3.51
5947 7600 4.941873 CAGTTAGGGGATGGTAAGTGAAAC 59.058 45.833 0.00 0.00 33.19 2.78
5962 7615 2.907042 AGGAAACCAGAGACAGTTAGGG 59.093 50.000 0.00 0.00 0.00 3.53
5966 7619 2.952310 GCAAAGGAAACCAGAGACAGTT 59.048 45.455 0.00 0.00 0.00 3.16
5967 7620 2.092429 TGCAAAGGAAACCAGAGACAGT 60.092 45.455 0.00 0.00 0.00 3.55
5975 7628 2.435372 AGTGAGTGCAAAGGAAACCA 57.565 45.000 0.00 0.00 0.00 3.67
6007 7660 3.382855 GCAGATGCAATGTTGTGTGAAA 58.617 40.909 0.00 0.00 41.59 2.69
6009 7662 2.710220 GCAGATGCAATGTTGTGTGA 57.290 45.000 0.00 0.00 41.59 3.58
6021 7674 0.516877 TAAACACGCACTGCAGATGC 59.483 50.000 23.35 23.27 39.81 3.91
6022 7675 3.618594 ACTATAAACACGCACTGCAGATG 59.381 43.478 23.35 15.73 0.00 2.90
6023 7676 3.861840 ACTATAAACACGCACTGCAGAT 58.138 40.909 23.35 1.19 0.00 2.90
6025 7678 3.431912 TCAACTATAAACACGCACTGCAG 59.568 43.478 13.48 13.48 0.00 4.41
6026 7679 3.394719 TCAACTATAAACACGCACTGCA 58.605 40.909 1.11 0.00 0.00 4.41
6027 7680 4.600012 ATCAACTATAAACACGCACTGC 57.400 40.909 0.00 0.00 0.00 4.40
6028 7681 7.684670 ACATTATCAACTATAAACACGCACTG 58.315 34.615 0.00 0.00 33.76 3.66
6029 7682 7.843490 ACATTATCAACTATAAACACGCACT 57.157 32.000 0.00 0.00 33.76 4.40
6030 7683 9.417284 GTTACATTATCAACTATAAACACGCAC 57.583 33.333 0.00 0.00 33.76 5.34
6031 7684 9.373603 AGTTACATTATCAACTATAAACACGCA 57.626 29.630 0.00 0.00 33.76 5.24
6032 7685 9.632969 CAGTTACATTATCAACTATAAACACGC 57.367 33.333 0.00 0.00 33.76 5.34
6049 7717 7.883311 AGCATGGTTACTTAGTTCAGTTACATT 59.117 33.333 0.00 0.00 29.52 2.71
6056 7724 7.324178 AGAAGTAGCATGGTTACTTAGTTCAG 58.676 38.462 1.12 0.00 40.46 3.02
6074 7746 4.322349 CCTGAGGACCTGTTGAAGAAGTAG 60.322 50.000 0.00 0.00 0.00 2.57
6076 7748 2.370189 CCTGAGGACCTGTTGAAGAAGT 59.630 50.000 0.00 0.00 0.00 3.01
6079 7751 1.132849 TCCCTGAGGACCTGTTGAAGA 60.133 52.381 0.00 0.00 37.19 2.87
6082 7754 0.487325 TCTCCCTGAGGACCTGTTGA 59.513 55.000 0.00 0.00 37.19 3.18
6084 7756 1.650528 CTTCTCCCTGAGGACCTGTT 58.349 55.000 0.00 0.00 37.19 3.16
6172 7844 2.047274 GGGCTGCACTTCTACGCA 60.047 61.111 0.50 0.00 36.52 5.24
6186 7858 2.802719 TGGTTCTTACAGGATTTGGGC 58.197 47.619 0.00 0.00 0.00 5.36
6187 7859 5.538433 TCTTTTGGTTCTTACAGGATTTGGG 59.462 40.000 0.00 0.00 0.00 4.12
6201 7873 6.038714 CCAGGCACTATCTTATCTTTTGGTTC 59.961 42.308 0.00 0.00 36.02 3.62
6259 7944 6.516739 TGTTGACACAATAACACCTGAAAA 57.483 33.333 0.00 0.00 32.30 2.29
6334 8021 2.295885 CTGGCCCAAAATTGCAAACAA 58.704 42.857 1.71 0.00 40.87 2.83
6363 8050 5.016831 GGAAAATGGGAGTACAAAGGACAT 58.983 41.667 0.00 0.00 0.00 3.06
6364 8051 4.141135 TGGAAAATGGGAGTACAAAGGACA 60.141 41.667 0.00 0.00 0.00 4.02
6366 8053 4.105697 AGTGGAAAATGGGAGTACAAAGGA 59.894 41.667 0.00 0.00 0.00 3.36
6454 8150 8.330466 ACGTACATAAAATGAAATTCACCAGA 57.670 30.769 0.00 0.00 33.67 3.86
6497 8193 4.564782 AATCTGAGCATTTGACTGGAGA 57.435 40.909 0.00 0.00 0.00 3.71
6498 8194 6.939132 AATAATCTGAGCATTTGACTGGAG 57.061 37.500 0.00 0.00 0.00 3.86
6499 8195 7.707624 AAAATAATCTGAGCATTTGACTGGA 57.292 32.000 0.00 0.00 0.00 3.86
6501 8197 9.635520 AAGAAAAATAATCTGAGCATTTGACTG 57.364 29.630 0.00 0.00 0.00 3.51
6502 8198 9.852091 GAAGAAAAATAATCTGAGCATTTGACT 57.148 29.630 0.00 2.27 0.00 3.41
6503 8199 9.852091 AGAAGAAAAATAATCTGAGCATTTGAC 57.148 29.630 0.00 0.60 0.00 3.18
6611 8350 5.353394 AATCCAGCTTATCCAACGAGTTA 57.647 39.130 0.00 0.00 0.00 2.24
6629 8407 3.243975 ACACCGGTGGATTACGATAATCC 60.244 47.826 36.47 20.74 44.99 3.01
6662 8465 3.730761 GCTGCCGCACTTCACTGG 61.731 66.667 0.00 0.00 35.78 4.00
6674 8477 0.673022 CTCTCCTGAACACTGCTGCC 60.673 60.000 0.00 0.00 0.00 4.85
6718 8521 4.588951 TCCACATCAAGAGAGCGGTAATAT 59.411 41.667 0.00 0.00 0.00 1.28
6748 8551 3.587923 GCTGCAGTAATTTTGATTGCCA 58.412 40.909 16.64 0.00 33.98 4.92
6769 8572 3.364889 TCATTCATACCGGAGTAAGCG 57.635 47.619 9.46 0.00 30.59 4.68
6808 8617 4.162690 GGCTGGGTCCGCGAGAAT 62.163 66.667 8.23 0.00 0.00 2.40
6825 8634 1.227263 CCGCGTGGAGGAATGGTAG 60.227 63.158 10.20 0.00 37.49 3.18
6826 8635 2.897207 CCGCGTGGAGGAATGGTA 59.103 61.111 10.20 0.00 37.49 3.25
6879 8690 1.383803 GGAGGGGCTGAGGTCTGAT 60.384 63.158 0.00 0.00 0.00 2.90
6900 8711 0.107017 CTCTGGCCATTCCCATTCGT 60.107 55.000 5.51 0.00 33.64 3.85
6920 8738 3.559384 GGTGGGACTAAAGAACCAGGAAG 60.559 52.174 0.00 0.00 32.84 3.46
6995 8813 2.825836 CTCCATTCTGGCACGCCC 60.826 66.667 5.42 0.00 37.47 6.13
7010 8828 2.896801 CGTGTGCTTGGTGTGCCTC 61.897 63.158 0.00 0.00 35.27 4.70
7045 8863 0.391395 ACGAAACCACCACAACACGA 60.391 50.000 0.00 0.00 0.00 4.35
7061 8879 2.011222 GTTTTCACTTGGGTCACACGA 58.989 47.619 0.00 0.00 0.00 4.35
7068 8886 3.132111 AGCAATTTCGTTTTCACTTGGGT 59.868 39.130 0.00 0.00 0.00 4.51
7069 8887 3.716601 AGCAATTTCGTTTTCACTTGGG 58.283 40.909 0.00 0.00 0.00 4.12
7070 8888 3.735746 GGAGCAATTTCGTTTTCACTTGG 59.264 43.478 0.00 0.00 0.00 3.61
7071 8889 4.358851 TGGAGCAATTTCGTTTTCACTTG 58.641 39.130 0.00 0.00 0.00 3.16
7072 8890 4.647424 TGGAGCAATTTCGTTTTCACTT 57.353 36.364 0.00 0.00 0.00 3.16
7073 8891 4.549458 CATGGAGCAATTTCGTTTTCACT 58.451 39.130 0.00 0.00 0.00 3.41
7074 8892 3.674753 CCATGGAGCAATTTCGTTTTCAC 59.325 43.478 5.56 0.00 0.00 3.18
7075 8893 3.571828 TCCATGGAGCAATTTCGTTTTCA 59.428 39.130 11.44 0.00 0.00 2.69
7076 8894 3.920412 GTCCATGGAGCAATTTCGTTTTC 59.080 43.478 16.81 0.00 0.00 2.29
7077 8895 3.611530 CGTCCATGGAGCAATTTCGTTTT 60.612 43.478 16.81 0.00 0.00 2.43
7078 8896 2.095263 CGTCCATGGAGCAATTTCGTTT 60.095 45.455 16.81 0.00 0.00 3.60
7079 8897 1.468520 CGTCCATGGAGCAATTTCGTT 59.531 47.619 16.81 0.00 0.00 3.85
7080 8898 1.086696 CGTCCATGGAGCAATTTCGT 58.913 50.000 16.81 0.00 0.00 3.85
7081 8899 1.062587 GTCGTCCATGGAGCAATTTCG 59.937 52.381 16.81 13.50 0.00 3.46
7082 8900 2.083774 TGTCGTCCATGGAGCAATTTC 58.916 47.619 16.81 0.00 0.00 2.17
7083 8901 1.812571 GTGTCGTCCATGGAGCAATTT 59.187 47.619 16.81 0.00 0.00 1.82
7084 8902 1.453155 GTGTCGTCCATGGAGCAATT 58.547 50.000 16.81 0.00 0.00 2.32
7085 8903 0.740868 CGTGTCGTCCATGGAGCAAT 60.741 55.000 16.81 0.00 0.00 3.56
7086 8904 1.374125 CGTGTCGTCCATGGAGCAA 60.374 57.895 16.81 0.00 0.00 3.91
7087 8905 1.604147 ATCGTGTCGTCCATGGAGCA 61.604 55.000 16.81 11.99 0.00 4.26
7088 8906 0.872021 GATCGTGTCGTCCATGGAGC 60.872 60.000 16.81 9.30 0.00 4.70
7089 8907 0.741326 AGATCGTGTCGTCCATGGAG 59.259 55.000 16.81 9.76 0.00 3.86
7090 8908 0.455815 CAGATCGTGTCGTCCATGGA 59.544 55.000 11.44 11.44 0.00 3.41
7091 8909 1.148157 GCAGATCGTGTCGTCCATGG 61.148 60.000 4.97 4.97 0.00 3.66
7092 8910 0.458370 TGCAGATCGTGTCGTCCATG 60.458 55.000 0.00 0.00 0.00 3.66
7093 8911 0.458543 GTGCAGATCGTGTCGTCCAT 60.459 55.000 0.00 0.00 0.00 3.41
7094 8912 1.080772 GTGCAGATCGTGTCGTCCA 60.081 57.895 0.00 0.00 0.00 4.02
7095 8913 2.152699 CGTGCAGATCGTGTCGTCC 61.153 63.158 0.00 0.00 0.00 4.79
7096 8914 0.523546 ATCGTGCAGATCGTGTCGTC 60.524 55.000 0.00 0.00 33.45 4.20
7097 8915 0.523546 GATCGTGCAGATCGTGTCGT 60.524 55.000 9.44 0.00 45.35 4.34
7098 8916 2.199152 GATCGTGCAGATCGTGTCG 58.801 57.895 9.44 0.00 45.35 4.35
7105 8923 0.308068 CGTCCGTAGATCGTGCAGAT 59.692 55.000 0.00 0.00 43.51 2.90
7106 8924 0.741927 TCGTCCGTAGATCGTGCAGA 60.742 55.000 0.00 0.00 37.94 4.26
7107 8925 0.589229 GTCGTCCGTAGATCGTGCAG 60.589 60.000 0.00 0.00 37.94 4.41
7108 8926 1.300266 TGTCGTCCGTAGATCGTGCA 61.300 55.000 0.00 0.00 37.94 4.57
7109 8927 0.860618 GTGTCGTCCGTAGATCGTGC 60.861 60.000 0.00 0.00 37.94 5.34
7110 8928 0.247974 GGTGTCGTCCGTAGATCGTG 60.248 60.000 0.00 0.00 37.94 4.35
7111 8929 0.392193 AGGTGTCGTCCGTAGATCGT 60.392 55.000 0.00 0.00 37.94 3.73
7112 8930 0.731417 AAGGTGTCGTCCGTAGATCG 59.269 55.000 0.00 0.00 39.52 3.69
7113 8931 1.065251 GGAAGGTGTCGTCCGTAGATC 59.935 57.143 0.00 0.00 32.23 2.75
7114 8932 1.101331 GGAAGGTGTCGTCCGTAGAT 58.899 55.000 0.00 0.00 32.23 1.98
7115 8933 0.037303 AGGAAGGTGTCGTCCGTAGA 59.963 55.000 0.00 0.00 44.61 2.59
7116 8934 0.886563 AAGGAAGGTGTCGTCCGTAG 59.113 55.000 0.00 0.00 44.61 3.51
7117 8935 0.883833 GAAGGAAGGTGTCGTCCGTA 59.116 55.000 0.00 0.00 44.61 4.02
7118 8936 1.664306 GAAGGAAGGTGTCGTCCGT 59.336 57.895 0.00 0.00 44.61 4.69
7119 8937 1.080025 GGAAGGAAGGTGTCGTCCG 60.080 63.158 0.00 0.00 44.61 4.79
7120 8938 1.295746 GGGAAGGAAGGTGTCGTCC 59.704 63.158 0.00 0.00 41.07 4.79
7121 8939 0.395312 TTGGGAAGGAAGGTGTCGTC 59.605 55.000 0.00 0.00 0.00 4.20
7122 8940 0.108019 GTTGGGAAGGAAGGTGTCGT 59.892 55.000 0.00 0.00 0.00 4.34
7123 8941 0.107831 TGTTGGGAAGGAAGGTGTCG 59.892 55.000 0.00 0.00 0.00 4.35
7124 8942 1.897560 CTGTTGGGAAGGAAGGTGTC 58.102 55.000 0.00 0.00 0.00 3.67
7125 8943 0.178990 GCTGTTGGGAAGGAAGGTGT 60.179 55.000 0.00 0.00 0.00 4.16
7126 8944 1.237285 CGCTGTTGGGAAGGAAGGTG 61.237 60.000 0.00 0.00 0.00 4.00
7127 8945 1.073199 CGCTGTTGGGAAGGAAGGT 59.927 57.895 0.00 0.00 0.00 3.50
7128 8946 2.335712 GCGCTGTTGGGAAGGAAGG 61.336 63.158 0.00 0.00 0.00 3.46
7129 8947 0.036388 TAGCGCTGTTGGGAAGGAAG 60.036 55.000 22.90 0.00 0.00 3.46
7130 8948 0.036388 CTAGCGCTGTTGGGAAGGAA 60.036 55.000 22.90 0.00 0.00 3.36
7131 8949 1.596934 CTAGCGCTGTTGGGAAGGA 59.403 57.895 22.90 0.00 0.00 3.36
7132 8950 1.450312 CCTAGCGCTGTTGGGAAGG 60.450 63.158 22.90 13.40 0.00 3.46
7133 8951 2.109126 GCCTAGCGCTGTTGGGAAG 61.109 63.158 22.90 7.21 0.00 3.46
7134 8952 2.046314 GCCTAGCGCTGTTGGGAA 60.046 61.111 22.90 0.00 0.00 3.97
7135 8953 3.315142 CTGCCTAGCGCTGTTGGGA 62.315 63.158 22.90 18.78 38.78 4.37
7136 8954 2.821366 CTGCCTAGCGCTGTTGGG 60.821 66.667 22.90 17.11 38.78 4.12
7137 8955 3.503363 GCTGCCTAGCGCTGTTGG 61.503 66.667 22.90 19.75 40.67 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.