Multiple sequence alignment - TraesCS2A01G035900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G035900 chr2A 100.000 3611 0 0 1 3611 15468988 15465378 0.000000e+00 6669.0
1 TraesCS2A01G035900 chr2A 91.071 1568 112 13 1200 2760 15460260 15458714 0.000000e+00 2095.0
2 TraesCS2A01G035900 chr2A 83.286 1394 205 19 1198 2581 15602454 15603829 0.000000e+00 1258.0
3 TraesCS2A01G035900 chr2A 83.086 1413 188 26 1198 2589 15529964 15528582 0.000000e+00 1238.0
4 TraesCS2A01G035900 chr2A 80.556 972 159 21 1616 2575 15449647 15448694 0.000000e+00 721.0
5 TraesCS2A01G035900 chr2A 75.213 1408 247 65 1222 2569 711855900 711857265 1.120000e-159 573.0
6 TraesCS2A01G035900 chr2A 84.386 570 59 12 3004 3567 770975275 770975820 1.910000e-147 532.0
7 TraesCS2A01G035900 chr2D 93.100 1797 85 20 841 2630 13476376 13474612 0.000000e+00 2595.0
8 TraesCS2A01G035900 chr2D 83.770 1411 193 23 1201 2598 13508843 13510230 0.000000e+00 1304.0
9 TraesCS2A01G035900 chr2D 82.857 1400 178 37 1198 2587 13482998 13481651 0.000000e+00 1199.0
10 TraesCS2A01G035900 chr2D 84.191 1088 148 14 1493 2572 640240981 640242052 0.000000e+00 1035.0
11 TraesCS2A01G035900 chr2D 83.311 755 91 16 1844 2593 13435156 13434432 0.000000e+00 664.0
12 TraesCS2A01G035900 chr2D 75.513 1413 248 57 1222 2576 572404261 572405633 1.430000e-168 603.0
13 TraesCS2A01G035900 chr2D 84.276 566 62 9 3004 3567 645442652 645443192 8.880000e-146 527.0
14 TraesCS2A01G035900 chr2D 89.541 392 33 5 338 725 107116667 107116280 1.170000e-134 490.0
15 TraesCS2A01G035900 chr2D 87.811 402 38 8 330 725 522499236 522499632 9.140000e-126 460.0
16 TraesCS2A01G035900 chr2D 92.829 251 18 0 2 252 634063616 634063866 7.370000e-97 364.0
17 TraesCS2A01G035900 chr2D 79.845 258 33 10 1198 1453 640240735 640240975 1.720000e-38 171.0
18 TraesCS2A01G035900 chr2D 97.297 37 1 0 731 767 13477261 13477225 3.010000e-06 63.9
19 TraesCS2A01G035900 chr2B 92.062 1600 84 23 1181 2772 24110313 24108749 0.000000e+00 2211.0
20 TraesCS2A01G035900 chr2B 91.956 1467 103 10 1198 2657 24124410 24125868 0.000000e+00 2041.0
21 TraesCS2A01G035900 chr2B 83.417 1393 202 20 1199 2581 24217031 24218404 0.000000e+00 1266.0
22 TraesCS2A01G035900 chr2B 80.158 1396 220 27 1198 2575 24098686 24097330 0.000000e+00 990.0
23 TraesCS2A01G035900 chr2B 84.483 580 75 7 1198 1768 24215328 24215901 3.150000e-155 558.0
24 TraesCS2A01G035900 chr2B 91.440 257 21 1 1 257 72759276 72759021 5.740000e-93 351.0
25 TraesCS2A01G035900 chr2B 83.099 213 16 12 856 1063 24110573 24110376 3.710000e-40 176.0
26 TraesCS2A01G035900 chr2B 87.179 78 3 2 764 834 24110639 24110562 8.310000e-12 82.4
27 TraesCS2A01G035900 chr4A 93.521 818 38 3 2795 3611 193101060 193100257 0.000000e+00 1203.0
28 TraesCS2A01G035900 chr4A 82.870 683 99 11 2935 3611 713099951 713099281 6.670000e-167 597.0
29 TraesCS2A01G035900 chr4A 87.593 403 42 6 329 725 616918925 616919325 9.140000e-126 460.0
30 TraesCS2A01G035900 chr4D 76.071 1120 210 38 1495 2575 489628658 489627558 6.860000e-147 531.0
31 TraesCS2A01G035900 chr4D 74.150 1412 283 57 1217 2575 489468890 489467508 8.940000e-141 510.0
32 TraesCS2A01G035900 chr4D 74.978 1119 225 38 1495 2575 489623526 489622425 7.060000e-127 464.0
33 TraesCS2A01G035900 chr4D 92.578 256 19 0 1 256 303072598 303072343 5.700000e-98 368.0
34 TraesCS2A01G035900 chr4D 77.606 259 51 6 1532 1790 489222528 489222277 2.250000e-32 150.0
35 TraesCS2A01G035900 chr1B 84.586 532 73 5 3081 3609 587963701 587964226 1.490000e-143 520.0
36 TraesCS2A01G035900 chr1B 75.238 1260 217 57 1378 2580 603604605 603605826 8.940000e-141 510.0
37 TraesCS2A01G035900 chr1B 91.829 257 21 0 1 257 535814607 535814863 3.430000e-95 359.0
38 TraesCS2A01G035900 chr5A 83.964 555 66 4 3007 3560 343856262 343855730 8.940000e-141 510.0
39 TraesCS2A01G035900 chr5A 74.645 422 65 20 1217 1626 671096881 671096490 8.080000e-32 148.0
40 TraesCS2A01G035900 chr4B 74.274 1411 262 68 1217 2575 627812981 627811620 5.380000e-138 501.0
41 TraesCS2A01G035900 chr4B 75.271 1108 216 41 1495 2563 627555840 627554752 3.260000e-130 475.0
42 TraesCS2A01G035900 chr4B 92.913 254 17 1 1 253 519348323 519348070 5.700000e-98 368.0
43 TraesCS2A01G035900 chr5D 88.395 405 38 6 327 725 482907956 482908357 2.520000e-131 479.0
44 TraesCS2A01G035900 chr5D 86.783 401 47 5 328 725 429921148 429920751 3.310000e-120 442.0
45 TraesCS2A01G035900 chr5D 92.278 259 20 0 1 259 70401035 70401293 5.700000e-98 368.0
46 TraesCS2A01G035900 chr3D 88.089 403 38 8 329 725 553470062 553469664 1.520000e-128 470.0
47 TraesCS2A01G035900 chr3D 96.970 33 0 1 1114 1145 615120815 615120783 2.000000e-03 54.7
48 TraesCS2A01G035900 chr7D 88.976 381 38 4 330 707 596533191 596533570 5.460000e-128 468.0
49 TraesCS2A01G035900 chr7D 93.173 249 17 0 3 251 615955015 615955263 2.050000e-97 366.0
50 TraesCS2A01G035900 chr6D 87.282 401 43 7 328 725 407521808 407522203 5.500000e-123 451.0
51 TraesCS2A01G035900 chr6D 93.701 254 16 0 1 254 469298206 469297953 7.320000e-102 381.0
52 TraesCS2A01G035900 chr7A 86.352 403 47 7 329 725 727047609 727047209 1.990000e-117 433.0
53 TraesCS2A01G035900 chr7A 80.833 360 57 6 3183 3537 33073862 33074214 4.590000e-69 272.0
54 TraesCS2A01G035900 chr5B 84.410 449 55 6 2944 3389 221206635 221206199 9.270000e-116 427.0
55 TraesCS2A01G035900 chr1A 92.126 254 20 0 1 254 587375904 587376157 3.430000e-95 359.0
56 TraesCS2A01G035900 chr6B 80.737 353 53 10 3204 3550 107881401 107881058 9.940000e-66 261.0
57 TraesCS2A01G035900 chr6B 79.720 286 48 9 3183 3464 299044895 299044616 7.910000e-47 198.0
58 TraesCS2A01G035900 chr6A 79.444 360 64 8 3183 3537 593992774 593993128 2.780000e-61 246.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G035900 chr2A 15465378 15468988 3610 True 6669.000000 6669 100.000000 1 3611 1 chr2A.!!$R3 3610
1 TraesCS2A01G035900 chr2A 15458714 15460260 1546 True 2095.000000 2095 91.071000 1200 2760 1 chr2A.!!$R2 1560
2 TraesCS2A01G035900 chr2A 15602454 15603829 1375 False 1258.000000 1258 83.286000 1198 2581 1 chr2A.!!$F1 1383
3 TraesCS2A01G035900 chr2A 15528582 15529964 1382 True 1238.000000 1238 83.086000 1198 2589 1 chr2A.!!$R4 1391
4 TraesCS2A01G035900 chr2A 15448694 15449647 953 True 721.000000 721 80.556000 1616 2575 1 chr2A.!!$R1 959
5 TraesCS2A01G035900 chr2A 711855900 711857265 1365 False 573.000000 573 75.213000 1222 2569 1 chr2A.!!$F2 1347
6 TraesCS2A01G035900 chr2A 770975275 770975820 545 False 532.000000 532 84.386000 3004 3567 1 chr2A.!!$F3 563
7 TraesCS2A01G035900 chr2D 13474612 13477261 2649 True 1329.450000 2595 95.198500 731 2630 2 chr2D.!!$R4 1899
8 TraesCS2A01G035900 chr2D 13508843 13510230 1387 False 1304.000000 1304 83.770000 1201 2598 1 chr2D.!!$F1 1397
9 TraesCS2A01G035900 chr2D 13481651 13482998 1347 True 1199.000000 1199 82.857000 1198 2587 1 chr2D.!!$R2 1389
10 TraesCS2A01G035900 chr2D 13434432 13435156 724 True 664.000000 664 83.311000 1844 2593 1 chr2D.!!$R1 749
11 TraesCS2A01G035900 chr2D 572404261 572405633 1372 False 603.000000 603 75.513000 1222 2576 1 chr2D.!!$F3 1354
12 TraesCS2A01G035900 chr2D 640240735 640242052 1317 False 603.000000 1035 82.018000 1198 2572 2 chr2D.!!$F6 1374
13 TraesCS2A01G035900 chr2D 645442652 645443192 540 False 527.000000 527 84.276000 3004 3567 1 chr2D.!!$F5 563
14 TraesCS2A01G035900 chr2B 24124410 24125868 1458 False 2041.000000 2041 91.956000 1198 2657 1 chr2B.!!$F1 1459
15 TraesCS2A01G035900 chr2B 24097330 24098686 1356 True 990.000000 990 80.158000 1198 2575 1 chr2B.!!$R1 1377
16 TraesCS2A01G035900 chr2B 24215328 24218404 3076 False 912.000000 1266 83.950000 1198 2581 2 chr2B.!!$F2 1383
17 TraesCS2A01G035900 chr2B 24108749 24110639 1890 True 823.133333 2211 87.446667 764 2772 3 chr2B.!!$R3 2008
18 TraesCS2A01G035900 chr4A 193100257 193101060 803 True 1203.000000 1203 93.521000 2795 3611 1 chr4A.!!$R1 816
19 TraesCS2A01G035900 chr4A 713099281 713099951 670 True 597.000000 597 82.870000 2935 3611 1 chr4A.!!$R2 676
20 TraesCS2A01G035900 chr4D 489627558 489628658 1100 True 531.000000 531 76.071000 1495 2575 1 chr4D.!!$R5 1080
21 TraesCS2A01G035900 chr4D 489467508 489468890 1382 True 510.000000 510 74.150000 1217 2575 1 chr4D.!!$R3 1358
22 TraesCS2A01G035900 chr4D 489622425 489623526 1101 True 464.000000 464 74.978000 1495 2575 1 chr4D.!!$R4 1080
23 TraesCS2A01G035900 chr1B 587963701 587964226 525 False 520.000000 520 84.586000 3081 3609 1 chr1B.!!$F2 528
24 TraesCS2A01G035900 chr1B 603604605 603605826 1221 False 510.000000 510 75.238000 1378 2580 1 chr1B.!!$F3 1202
25 TraesCS2A01G035900 chr5A 343855730 343856262 532 True 510.000000 510 83.964000 3007 3560 1 chr5A.!!$R1 553
26 TraesCS2A01G035900 chr4B 627811620 627812981 1361 True 501.000000 501 74.274000 1217 2575 1 chr4B.!!$R3 1358
27 TraesCS2A01G035900 chr4B 627554752 627555840 1088 True 475.000000 475 75.271000 1495 2563 1 chr4B.!!$R2 1068

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
149 150 0.037590 ATGGCCTGGACGTGCTTTAA 59.962 50.000 8.99 0.00 0.00 1.52 F
256 257 0.039527 GCAACCAAACACGCCCTAAG 60.040 55.000 0.00 0.00 0.00 2.18 F
367 368 0.107456 CAGGCTTATCTGCACCCGAT 59.893 55.000 0.00 0.00 34.04 4.18 F
919 1695 0.158096 CGTGCGTCTGTGTTACGTTC 59.842 55.000 0.00 0.00 42.26 3.95 F
1004 1782 1.005156 GAGGAGATCCGAGCATGCC 60.005 63.158 15.66 4.99 42.08 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1091 1875 1.871039 CACACAAGGTTTTCCGACGAT 59.129 47.619 0.00 0.0 46.35 3.73 R
1157 1941 2.277884 GCGCGCTCTCTCTCTCAC 60.278 66.667 26.67 0.0 0.00 3.51 R
2319 4963 2.362242 AGCGTACTTGAAGCTGGGA 58.638 52.632 0.00 0.0 41.78 4.37 R
2604 5277 0.030369 CTACCACCGCGGATCAGTAC 59.970 60.000 35.90 0.0 38.63 2.73 R
2855 5528 0.178068 AAACGTGGATCGGGGAGATG 59.822 55.000 0.00 0.0 44.69 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.285291 GATTTTTCGGCGATGCGG 57.715 55.556 11.76 0.00 0.00 5.69
18 19 1.298339 GATTTTTCGGCGATGCGGG 60.298 57.895 11.76 0.00 0.00 6.13
19 20 3.409959 ATTTTTCGGCGATGCGGGC 62.410 57.895 11.76 0.00 0.00 6.13
36 37 2.352915 CGAGCTCGCGTCATCTCC 60.353 66.667 25.07 0.00 0.00 3.71
37 38 2.829206 CGAGCTCGCGTCATCTCCT 61.829 63.158 25.07 0.00 0.00 3.69
38 39 1.008995 GAGCTCGCGTCATCTCCTC 60.009 63.158 5.77 0.00 0.00 3.71
39 40 1.444119 GAGCTCGCGTCATCTCCTCT 61.444 60.000 5.77 0.00 0.00 3.69
40 41 1.299014 GCTCGCGTCATCTCCTCTG 60.299 63.158 5.77 0.00 0.00 3.35
41 42 1.299014 CTCGCGTCATCTCCTCTGC 60.299 63.158 5.77 0.00 0.00 4.26
42 43 1.723608 CTCGCGTCATCTCCTCTGCT 61.724 60.000 5.77 0.00 0.00 4.24
43 44 1.299014 CGCGTCATCTCCTCTGCTC 60.299 63.158 0.00 0.00 0.00 4.26
44 45 1.299014 GCGTCATCTCCTCTGCTCG 60.299 63.158 0.00 0.00 0.00 5.03
45 46 1.299014 CGTCATCTCCTCTGCTCGC 60.299 63.158 0.00 0.00 0.00 5.03
46 47 1.812525 GTCATCTCCTCTGCTCGCA 59.187 57.895 0.00 0.00 0.00 5.10
47 48 0.527385 GTCATCTCCTCTGCTCGCAC 60.527 60.000 0.00 0.00 0.00 5.34
48 49 1.588403 CATCTCCTCTGCTCGCACG 60.588 63.158 0.00 0.00 0.00 5.34
49 50 1.750780 ATCTCCTCTGCTCGCACGA 60.751 57.895 0.00 0.00 0.00 4.35
50 51 1.723608 ATCTCCTCTGCTCGCACGAG 61.724 60.000 15.50 15.50 44.56 4.18
51 52 3.408501 CTCCTCTGCTCGCACGAGG 62.409 68.421 20.56 21.28 42.19 4.63
52 53 4.504916 CCTCTGCTCGCACGAGGG 62.505 72.222 20.56 9.96 42.19 4.30
53 54 4.504916 CTCTGCTCGCACGAGGGG 62.505 72.222 20.56 2.19 42.19 4.79
59 60 3.760035 TCGCACGAGGGGAGAAGC 61.760 66.667 0.00 0.00 33.99 3.86
64 65 4.856607 CGAGGGGAGAAGCGCGTC 62.857 72.222 15.94 15.94 39.93 5.19
65 66 3.760035 GAGGGGAGAAGCGCGTCA 61.760 66.667 24.95 0.00 42.05 4.35
66 67 3.991536 GAGGGGAGAAGCGCGTCAC 62.992 68.421 24.95 18.46 42.05 3.67
69 70 4.070552 GGAGAAGCGCGTCACCCT 62.071 66.667 24.89 5.55 0.00 4.34
70 71 2.707849 GGAGAAGCGCGTCACCCTA 61.708 63.158 24.89 0.00 0.00 3.53
71 72 1.516603 GAGAAGCGCGTCACCCTAC 60.517 63.158 24.95 5.67 0.00 3.18
72 73 2.508663 GAAGCGCGTCACCCTACC 60.509 66.667 18.72 0.00 0.00 3.18
73 74 4.078516 AAGCGCGTCACCCTACCC 62.079 66.667 8.43 0.00 0.00 3.69
75 76 4.814294 GCGCGTCACCCTACCCAG 62.814 72.222 8.43 0.00 0.00 4.45
76 77 4.814294 CGCGTCACCCTACCCAGC 62.814 72.222 0.00 0.00 0.00 4.85
77 78 4.468689 GCGTCACCCTACCCAGCC 62.469 72.222 0.00 0.00 0.00 4.85
78 79 2.683933 CGTCACCCTACCCAGCCT 60.684 66.667 0.00 0.00 0.00 4.58
79 80 2.722201 CGTCACCCTACCCAGCCTC 61.722 68.421 0.00 0.00 0.00 4.70
80 81 2.363795 TCACCCTACCCAGCCTCG 60.364 66.667 0.00 0.00 0.00 4.63
81 82 4.162690 CACCCTACCCAGCCTCGC 62.163 72.222 0.00 0.00 0.00 5.03
94 95 4.200283 CTCGCCCGAGCCAGACTC 62.200 72.222 4.63 0.00 42.47 3.36
101 102 3.821055 GAGCCAGACTCGCGAGCT 61.821 66.667 34.83 27.59 35.18 4.09
102 103 2.438614 AGCCAGACTCGCGAGCTA 60.439 61.111 34.83 0.00 30.46 3.32
103 104 1.791103 GAGCCAGACTCGCGAGCTAT 61.791 60.000 34.83 17.12 35.18 2.97
104 105 1.066587 GCCAGACTCGCGAGCTATT 59.933 57.895 34.83 16.71 0.00 1.73
105 106 1.211818 GCCAGACTCGCGAGCTATTG 61.212 60.000 34.83 24.70 0.00 1.90
106 107 1.211818 CCAGACTCGCGAGCTATTGC 61.212 60.000 34.83 16.99 40.05 3.56
117 118 1.571460 GCTATTGCTGATTCGGGCG 59.429 57.895 0.00 0.00 36.03 6.13
118 119 1.160329 GCTATTGCTGATTCGGGCGT 61.160 55.000 0.00 0.00 36.03 5.68
119 120 1.299541 CTATTGCTGATTCGGGCGTT 58.700 50.000 0.00 0.00 0.00 4.84
120 121 1.670811 CTATTGCTGATTCGGGCGTTT 59.329 47.619 0.00 0.00 0.00 3.60
121 122 0.451783 ATTGCTGATTCGGGCGTTTC 59.548 50.000 0.00 0.00 0.00 2.78
122 123 1.582610 TTGCTGATTCGGGCGTTTCC 61.583 55.000 0.00 0.00 0.00 3.13
131 132 2.679996 GGCGTTTCCCTTGGGCAT 60.680 61.111 0.00 0.00 0.00 4.40
132 133 2.573340 GCGTTTCCCTTGGGCATG 59.427 61.111 0.00 0.00 0.00 4.06
133 134 3.005540 GCGTTTCCCTTGGGCATGG 62.006 63.158 0.00 0.00 0.00 3.66
134 135 2.981302 GTTTCCCTTGGGCATGGC 59.019 61.111 11.56 11.56 0.00 4.40
146 147 2.360350 CATGGCCTGGACGTGCTT 60.360 61.111 9.21 0.00 0.00 3.91
147 148 1.973281 CATGGCCTGGACGTGCTTT 60.973 57.895 9.21 0.00 0.00 3.51
148 149 0.676466 CATGGCCTGGACGTGCTTTA 60.676 55.000 9.21 0.00 0.00 1.85
149 150 0.037590 ATGGCCTGGACGTGCTTTAA 59.962 50.000 8.99 0.00 0.00 1.52
150 151 0.605319 TGGCCTGGACGTGCTTTAAG 60.605 55.000 8.99 0.00 0.00 1.85
151 152 1.305930 GGCCTGGACGTGCTTTAAGG 61.306 60.000 8.99 7.74 0.00 2.69
152 153 0.605589 GCCTGGACGTGCTTTAAGGT 60.606 55.000 8.99 0.00 0.00 3.50
153 154 1.439679 CCTGGACGTGCTTTAAGGTC 58.560 55.000 8.99 0.00 34.86 3.85
158 159 1.130561 GACGTGCTTTAAGGTCCATGC 59.869 52.381 0.00 0.00 0.00 4.06
159 160 0.096976 CGTGCTTTAAGGTCCATGCG 59.903 55.000 0.00 0.00 0.00 4.73
160 161 1.448985 GTGCTTTAAGGTCCATGCGA 58.551 50.000 0.00 0.00 0.00 5.10
161 162 2.017049 GTGCTTTAAGGTCCATGCGAT 58.983 47.619 0.00 0.00 0.00 4.58
162 163 2.016318 TGCTTTAAGGTCCATGCGATG 58.984 47.619 0.00 0.00 0.00 3.84
163 164 1.268743 GCTTTAAGGTCCATGCGATGC 60.269 52.381 0.00 0.00 0.00 3.91
164 165 1.003545 CTTTAAGGTCCATGCGATGCG 60.004 52.381 0.00 0.00 0.00 4.73
165 166 0.813610 TTAAGGTCCATGCGATGCGG 60.814 55.000 0.00 0.00 0.00 5.69
166 167 2.658679 TAAGGTCCATGCGATGCGGG 62.659 60.000 0.00 0.00 0.00 6.13
183 184 4.374702 GCCGCACAGTGAACGCAG 62.375 66.667 4.15 0.00 0.00 5.18
185 186 2.546321 CGCACAGTGAACGCAGTC 59.454 61.111 4.15 0.00 45.00 3.51
186 187 2.237066 CGCACAGTGAACGCAGTCA 61.237 57.895 4.15 0.00 45.00 3.41
187 188 1.761244 CGCACAGTGAACGCAGTCAA 61.761 55.000 4.15 0.00 45.00 3.18
188 189 0.588252 GCACAGTGAACGCAGTCAAT 59.412 50.000 4.15 0.00 45.00 2.57
189 190 1.398960 GCACAGTGAACGCAGTCAATC 60.399 52.381 4.15 0.00 45.00 2.67
190 191 1.866601 CACAGTGAACGCAGTCAATCA 59.133 47.619 0.00 0.00 45.00 2.57
191 192 2.287644 CACAGTGAACGCAGTCAATCAA 59.712 45.455 0.00 0.00 45.00 2.57
192 193 2.942376 ACAGTGAACGCAGTCAATCAAA 59.058 40.909 0.00 0.00 45.00 2.69
193 194 3.242739 ACAGTGAACGCAGTCAATCAAAC 60.243 43.478 0.00 0.00 45.00 2.93
194 195 2.032894 AGTGAACGCAGTCAATCAAACG 60.033 45.455 0.00 0.00 45.00 3.60
195 196 1.262950 TGAACGCAGTCAATCAAACGG 59.737 47.619 0.00 0.00 45.00 4.44
196 197 0.591170 AACGCAGTCAATCAAACGGG 59.409 50.000 0.00 0.00 45.00 5.28
197 198 1.154225 CGCAGTCAATCAAACGGGC 60.154 57.895 0.00 0.00 0.00 6.13
198 199 1.212751 GCAGTCAATCAAACGGGCC 59.787 57.895 0.00 0.00 0.00 5.80
199 200 1.523154 GCAGTCAATCAAACGGGCCA 61.523 55.000 4.39 0.00 0.00 5.36
200 201 0.240945 CAGTCAATCAAACGGGCCAC 59.759 55.000 4.39 0.00 0.00 5.01
201 202 0.110486 AGTCAATCAAACGGGCCACT 59.890 50.000 4.39 0.00 0.00 4.00
202 203 0.958822 GTCAATCAAACGGGCCACTT 59.041 50.000 4.39 0.00 0.00 3.16
203 204 1.339929 GTCAATCAAACGGGCCACTTT 59.660 47.619 4.39 0.00 0.00 2.66
204 205 1.611491 TCAATCAAACGGGCCACTTTC 59.389 47.619 4.39 0.00 0.00 2.62
205 206 1.613437 CAATCAAACGGGCCACTTTCT 59.387 47.619 4.39 0.00 0.00 2.52
206 207 1.995376 ATCAAACGGGCCACTTTCTT 58.005 45.000 4.39 0.00 0.00 2.52
207 208 1.314730 TCAAACGGGCCACTTTCTTC 58.685 50.000 4.39 0.00 0.00 2.87
208 209 0.313987 CAAACGGGCCACTTTCTTCC 59.686 55.000 4.39 0.00 0.00 3.46
209 210 0.826256 AAACGGGCCACTTTCTTCCC 60.826 55.000 4.39 0.00 35.42 3.97
211 212 3.062466 GGGCCACTTTCTTCCCGC 61.062 66.667 4.39 0.00 0.00 6.13
212 213 3.431725 GGCCACTTTCTTCCCGCG 61.432 66.667 0.00 0.00 0.00 6.46
213 214 4.103103 GCCACTTTCTTCCCGCGC 62.103 66.667 0.00 0.00 0.00 6.86
214 215 3.788766 CCACTTTCTTCCCGCGCG 61.789 66.667 25.67 25.67 0.00 6.86
215 216 3.788766 CACTTTCTTCCCGCGCGG 61.789 66.667 41.00 41.00 0.00 6.46
253 254 3.223589 GGCAACCAAACACGCCCT 61.224 61.111 0.00 0.00 38.67 5.19
254 255 1.899534 GGCAACCAAACACGCCCTA 60.900 57.895 0.00 0.00 38.67 3.53
255 256 1.457009 GGCAACCAAACACGCCCTAA 61.457 55.000 0.00 0.00 38.67 2.69
256 257 0.039527 GCAACCAAACACGCCCTAAG 60.040 55.000 0.00 0.00 0.00 2.18
257 258 1.314730 CAACCAAACACGCCCTAAGT 58.685 50.000 0.00 0.00 0.00 2.24
258 259 1.679153 CAACCAAACACGCCCTAAGTT 59.321 47.619 0.00 0.00 0.00 2.66
259 260 1.601166 ACCAAACACGCCCTAAGTTC 58.399 50.000 0.00 0.00 0.00 3.01
260 261 1.142262 ACCAAACACGCCCTAAGTTCT 59.858 47.619 0.00 0.00 0.00 3.01
261 262 2.227194 CCAAACACGCCCTAAGTTCTT 58.773 47.619 0.00 0.00 0.00 2.52
262 263 2.225727 CCAAACACGCCCTAAGTTCTTC 59.774 50.000 0.00 0.00 0.00 2.87
263 264 2.180432 AACACGCCCTAAGTTCTTCC 57.820 50.000 0.00 0.00 0.00 3.46
264 265 1.053424 ACACGCCCTAAGTTCTTCCA 58.947 50.000 0.00 0.00 0.00 3.53
265 266 1.270678 ACACGCCCTAAGTTCTTCCAC 60.271 52.381 0.00 0.00 0.00 4.02
266 267 1.002087 CACGCCCTAAGTTCTTCCACT 59.998 52.381 0.00 0.00 0.00 4.00
267 268 1.275573 ACGCCCTAAGTTCTTCCACTC 59.724 52.381 0.00 0.00 0.00 3.51
268 269 1.275291 CGCCCTAAGTTCTTCCACTCA 59.725 52.381 0.00 0.00 0.00 3.41
269 270 2.093447 CGCCCTAAGTTCTTCCACTCAT 60.093 50.000 0.00 0.00 0.00 2.90
270 271 3.274288 GCCCTAAGTTCTTCCACTCATG 58.726 50.000 0.00 0.00 0.00 3.07
271 272 3.274288 CCCTAAGTTCTTCCACTCATGC 58.726 50.000 0.00 0.00 0.00 4.06
272 273 3.054802 CCCTAAGTTCTTCCACTCATGCT 60.055 47.826 0.00 0.00 0.00 3.79
273 274 4.187694 CCTAAGTTCTTCCACTCATGCTC 58.812 47.826 0.00 0.00 0.00 4.26
274 275 2.376808 AGTTCTTCCACTCATGCTCG 57.623 50.000 0.00 0.00 0.00 5.03
275 276 0.723981 GTTCTTCCACTCATGCTCGC 59.276 55.000 0.00 0.00 0.00 5.03
276 277 0.321346 TTCTTCCACTCATGCTCGCA 59.679 50.000 0.00 0.00 0.00 5.10
277 278 0.538584 TCTTCCACTCATGCTCGCAT 59.461 50.000 0.00 0.00 37.08 4.73
278 279 1.065926 TCTTCCACTCATGCTCGCATT 60.066 47.619 0.85 0.00 33.90 3.56
279 280 2.168313 TCTTCCACTCATGCTCGCATTA 59.832 45.455 0.85 0.00 33.90 1.90
280 281 2.916702 TCCACTCATGCTCGCATTAT 57.083 45.000 0.85 0.00 33.90 1.28
281 282 3.198409 TCCACTCATGCTCGCATTATT 57.802 42.857 0.85 0.00 33.90 1.40
282 283 3.544684 TCCACTCATGCTCGCATTATTT 58.455 40.909 0.85 0.00 33.90 1.40
283 284 3.313249 TCCACTCATGCTCGCATTATTTG 59.687 43.478 0.85 0.00 33.90 2.32
284 285 3.313249 CCACTCATGCTCGCATTATTTGA 59.687 43.478 0.85 0.00 33.90 2.69
285 286 4.201940 CCACTCATGCTCGCATTATTTGAA 60.202 41.667 0.85 0.00 33.90 2.69
286 287 5.506815 CCACTCATGCTCGCATTATTTGAAT 60.507 40.000 0.85 0.00 33.90 2.57
287 288 5.975344 CACTCATGCTCGCATTATTTGAATT 59.025 36.000 0.85 0.00 33.90 2.17
288 289 6.474427 CACTCATGCTCGCATTATTTGAATTT 59.526 34.615 0.85 0.00 33.90 1.82
289 290 7.644945 CACTCATGCTCGCATTATTTGAATTTA 59.355 33.333 0.85 0.00 33.90 1.40
290 291 8.355169 ACTCATGCTCGCATTATTTGAATTTAT 58.645 29.630 0.85 0.00 33.90 1.40
291 292 9.830294 CTCATGCTCGCATTATTTGAATTTATA 57.170 29.630 0.85 0.00 33.90 0.98
292 293 9.611284 TCATGCTCGCATTATTTGAATTTATAC 57.389 29.630 0.85 0.00 33.90 1.47
293 294 9.396938 CATGCTCGCATTATTTGAATTTATACA 57.603 29.630 0.85 0.00 33.90 2.29
294 295 9.964303 ATGCTCGCATTATTTGAATTTATACAA 57.036 25.926 0.00 0.00 31.82 2.41
295 296 9.449550 TGCTCGCATTATTTGAATTTATACAAG 57.550 29.630 0.00 0.00 0.00 3.16
296 297 8.905702 GCTCGCATTATTTGAATTTATACAAGG 58.094 33.333 0.00 0.00 0.00 3.61
297 298 8.795786 TCGCATTATTTGAATTTATACAAGGC 57.204 30.769 0.00 0.00 0.00 4.35
298 299 8.629158 TCGCATTATTTGAATTTATACAAGGCT 58.371 29.630 0.00 0.00 0.00 4.58
299 300 9.248291 CGCATTATTTGAATTTATACAAGGCTT 57.752 29.630 0.00 0.00 0.00 4.35
305 306 8.532977 TTTGAATTTATACAAGGCTTTTCAGC 57.467 30.769 0.00 0.00 46.52 4.26
322 323 9.801873 GCTTTTCAGCAATATTTATTTAGTGGA 57.198 29.630 0.00 0.00 46.49 4.02
328 329 9.956720 CAGCAATATTTATTTAGTGGAAGAAGG 57.043 33.333 0.00 0.00 0.00 3.46
329 330 9.920946 AGCAATATTTATTTAGTGGAAGAAGGA 57.079 29.630 0.00 0.00 0.00 3.36
334 335 8.966069 ATTTATTTAGTGGAAGAAGGAGTAGC 57.034 34.615 0.00 0.00 0.00 3.58
335 336 4.451629 TTTAGTGGAAGAAGGAGTAGCG 57.548 45.455 0.00 0.00 0.00 4.26
336 337 1.926108 AGTGGAAGAAGGAGTAGCGT 58.074 50.000 0.00 0.00 0.00 5.07
337 338 1.546476 AGTGGAAGAAGGAGTAGCGTG 59.454 52.381 0.00 0.00 0.00 5.34
338 339 1.272769 GTGGAAGAAGGAGTAGCGTGT 59.727 52.381 0.00 0.00 0.00 4.49
339 340 1.968493 TGGAAGAAGGAGTAGCGTGTT 59.032 47.619 0.00 0.00 0.00 3.32
340 341 2.367567 TGGAAGAAGGAGTAGCGTGTTT 59.632 45.455 0.00 0.00 0.00 2.83
341 342 2.994578 GGAAGAAGGAGTAGCGTGTTTC 59.005 50.000 0.00 0.00 0.00 2.78
342 343 2.349297 AGAAGGAGTAGCGTGTTTCG 57.651 50.000 0.00 0.00 43.12 3.46
343 344 1.067776 AGAAGGAGTAGCGTGTTTCGG 60.068 52.381 0.00 0.00 40.26 4.30
350 351 4.025401 GCGTGTTTCGGTGCCCAG 62.025 66.667 0.00 0.00 40.26 4.45
351 352 3.353836 CGTGTTTCGGTGCCCAGG 61.354 66.667 0.00 0.00 35.71 4.45
352 353 3.670377 GTGTTTCGGTGCCCAGGC 61.670 66.667 0.38 0.38 42.35 4.85
353 354 3.884774 TGTTTCGGTGCCCAGGCT 61.885 61.111 10.58 0.00 42.51 4.58
354 355 2.597510 GTTTCGGTGCCCAGGCTT 60.598 61.111 10.58 0.00 42.51 4.35
355 356 1.302993 GTTTCGGTGCCCAGGCTTA 60.303 57.895 10.58 0.00 42.51 3.09
356 357 0.679960 GTTTCGGTGCCCAGGCTTAT 60.680 55.000 10.58 0.00 42.51 1.73
357 358 0.393808 TTTCGGTGCCCAGGCTTATC 60.394 55.000 10.58 0.00 42.51 1.75
358 359 1.271840 TTCGGTGCCCAGGCTTATCT 61.272 55.000 10.58 0.00 42.51 1.98
359 360 1.524621 CGGTGCCCAGGCTTATCTG 60.525 63.158 10.58 0.00 42.51 2.90
360 361 1.825622 GGTGCCCAGGCTTATCTGC 60.826 63.158 10.58 0.00 42.51 4.26
361 362 1.077501 GTGCCCAGGCTTATCTGCA 60.078 57.895 10.58 0.00 42.51 4.41
362 363 1.077501 TGCCCAGGCTTATCTGCAC 60.078 57.895 10.58 0.00 42.51 4.57
363 364 1.825622 GCCCAGGCTTATCTGCACC 60.826 63.158 0.08 0.00 38.26 5.01
364 365 1.152881 CCCAGGCTTATCTGCACCC 60.153 63.158 0.00 0.00 33.64 4.61
365 366 1.524621 CCAGGCTTATCTGCACCCG 60.525 63.158 0.00 0.00 33.64 5.28
366 367 1.522092 CAGGCTTATCTGCACCCGA 59.478 57.895 0.00 0.00 34.04 5.14
367 368 0.107456 CAGGCTTATCTGCACCCGAT 59.893 55.000 0.00 0.00 34.04 4.18
368 369 0.839946 AGGCTTATCTGCACCCGATT 59.160 50.000 0.00 0.00 34.04 3.34
369 370 2.047061 AGGCTTATCTGCACCCGATTA 58.953 47.619 0.00 0.00 34.04 1.75
370 371 2.037772 AGGCTTATCTGCACCCGATTAG 59.962 50.000 0.00 0.00 34.04 1.73
371 372 2.417719 GCTTATCTGCACCCGATTAGG 58.582 52.381 3.54 0.00 40.63 2.69
372 373 2.037251 GCTTATCTGCACCCGATTAGGA 59.963 50.000 3.54 0.00 45.00 2.94
373 374 3.494398 GCTTATCTGCACCCGATTAGGAA 60.494 47.826 3.54 0.00 45.00 3.36
374 375 4.703897 CTTATCTGCACCCGATTAGGAAA 58.296 43.478 0.00 0.00 45.00 3.13
375 376 3.644966 ATCTGCACCCGATTAGGAAAA 57.355 42.857 0.00 0.00 45.00 2.29
376 377 3.426787 TCTGCACCCGATTAGGAAAAA 57.573 42.857 0.00 0.00 45.00 1.94
440 441 4.855715 TTTTGTGTGGCGGATAATTTGA 57.144 36.364 0.00 0.00 0.00 2.69
441 442 5.398603 TTTTGTGTGGCGGATAATTTGAT 57.601 34.783 0.00 0.00 0.00 2.57
442 443 4.368874 TTGTGTGGCGGATAATTTGATG 57.631 40.909 0.00 0.00 0.00 3.07
443 444 2.098934 TGTGTGGCGGATAATTTGATGC 59.901 45.455 0.00 0.00 0.00 3.91
444 445 1.333308 TGTGGCGGATAATTTGATGCG 59.667 47.619 0.00 0.00 42.85 4.73
445 446 1.333619 GTGGCGGATAATTTGATGCGT 59.666 47.619 4.38 0.00 42.08 5.24
446 447 1.333308 TGGCGGATAATTTGATGCGTG 59.667 47.619 4.38 0.00 42.08 5.34
447 448 1.601903 GGCGGATAATTTGATGCGTGA 59.398 47.619 4.38 0.00 42.08 4.35
448 449 2.032799 GGCGGATAATTTGATGCGTGAA 59.967 45.455 4.38 0.00 42.08 3.18
449 450 3.291585 GCGGATAATTTGATGCGTGAAG 58.708 45.455 4.38 0.00 42.08 3.02
450 451 4.386424 GCGGATAATTTGATGCGTGAAGC 61.386 47.826 4.38 0.00 42.08 3.86
460 461 2.668212 CGTGAAGCCCGCTCCAAA 60.668 61.111 0.00 0.00 0.00 3.28
461 462 2.040544 CGTGAAGCCCGCTCCAAAT 61.041 57.895 0.00 0.00 0.00 2.32
462 463 1.586154 CGTGAAGCCCGCTCCAAATT 61.586 55.000 0.00 0.00 0.00 1.82
463 464 0.603065 GTGAAGCCCGCTCCAAATTT 59.397 50.000 0.00 0.00 0.00 1.82
464 465 0.887933 TGAAGCCCGCTCCAAATTTC 59.112 50.000 0.00 0.00 0.00 2.17
465 466 0.887933 GAAGCCCGCTCCAAATTTCA 59.112 50.000 0.00 0.00 0.00 2.69
466 467 1.272212 GAAGCCCGCTCCAAATTTCAA 59.728 47.619 0.00 0.00 0.00 2.69
467 468 0.890683 AGCCCGCTCCAAATTTCAAG 59.109 50.000 0.00 0.00 0.00 3.02
468 469 0.603065 GCCCGCTCCAAATTTCAAGT 59.397 50.000 0.00 0.00 0.00 3.16
469 470 1.402852 GCCCGCTCCAAATTTCAAGTC 60.403 52.381 0.00 0.00 0.00 3.01
470 471 1.885887 CCCGCTCCAAATTTCAAGTCA 59.114 47.619 0.00 0.00 0.00 3.41
471 472 2.493278 CCCGCTCCAAATTTCAAGTCAT 59.507 45.455 0.00 0.00 0.00 3.06
472 473 3.056607 CCCGCTCCAAATTTCAAGTCATT 60.057 43.478 0.00 0.00 0.00 2.57
473 474 4.559153 CCGCTCCAAATTTCAAGTCATTT 58.441 39.130 0.00 0.00 0.00 2.32
474 475 4.386652 CCGCTCCAAATTTCAAGTCATTTG 59.613 41.667 0.00 0.00 39.25 2.32
488 489 3.248266 GTCATTTGGACATTTGAGCAGC 58.752 45.455 0.00 0.00 46.19 5.25
489 490 3.057033 GTCATTTGGACATTTGAGCAGCT 60.057 43.478 0.00 0.00 46.19 4.24
490 491 3.192001 TCATTTGGACATTTGAGCAGCTC 59.808 43.478 16.21 16.21 0.00 4.09
491 492 1.538047 TTGGACATTTGAGCAGCTCC 58.462 50.000 20.16 3.72 0.00 4.70
492 493 0.322816 TGGACATTTGAGCAGCTCCC 60.323 55.000 20.16 12.53 0.00 4.30
493 494 0.322816 GGACATTTGAGCAGCTCCCA 60.323 55.000 20.16 6.52 0.00 4.37
494 495 1.093159 GACATTTGAGCAGCTCCCAG 58.907 55.000 20.16 9.49 0.00 4.45
495 496 0.964358 ACATTTGAGCAGCTCCCAGC 60.964 55.000 20.16 0.00 42.84 4.85
496 497 0.963856 CATTTGAGCAGCTCCCAGCA 60.964 55.000 20.16 0.00 45.56 4.41
497 498 0.251474 ATTTGAGCAGCTCCCAGCAA 60.251 50.000 20.16 4.64 45.56 3.91
498 499 0.467844 TTTGAGCAGCTCCCAGCAAA 60.468 50.000 20.16 10.71 45.56 3.68
499 500 0.467844 TTGAGCAGCTCCCAGCAAAA 60.468 50.000 20.16 2.42 45.56 2.44
500 501 0.467844 TGAGCAGCTCCCAGCAAAAA 60.468 50.000 20.16 0.00 45.56 1.94
520 521 5.476091 AAAAGATAAATCGGGCCAAAACA 57.524 34.783 4.39 0.00 0.00 2.83
521 522 4.718940 AAGATAAATCGGGCCAAAACAG 57.281 40.909 4.39 0.00 0.00 3.16
522 523 3.697166 AGATAAATCGGGCCAAAACAGT 58.303 40.909 4.39 0.00 0.00 3.55
523 524 4.850680 AGATAAATCGGGCCAAAACAGTA 58.149 39.130 4.39 0.00 0.00 2.74
524 525 4.638865 AGATAAATCGGGCCAAAACAGTAC 59.361 41.667 4.39 0.00 0.00 2.73
525 526 2.279935 AATCGGGCCAAAACAGTACA 57.720 45.000 4.39 0.00 0.00 2.90
526 527 2.507407 ATCGGGCCAAAACAGTACAT 57.493 45.000 4.39 0.00 0.00 2.29
527 528 3.637911 ATCGGGCCAAAACAGTACATA 57.362 42.857 4.39 0.00 0.00 2.29
528 529 3.420300 TCGGGCCAAAACAGTACATAA 57.580 42.857 4.39 0.00 0.00 1.90
529 530 3.752665 TCGGGCCAAAACAGTACATAAA 58.247 40.909 4.39 0.00 0.00 1.40
530 531 3.502979 TCGGGCCAAAACAGTACATAAAC 59.497 43.478 4.39 0.00 0.00 2.01
531 532 3.253677 CGGGCCAAAACAGTACATAAACA 59.746 43.478 4.39 0.00 0.00 2.83
532 533 4.614993 CGGGCCAAAACAGTACATAAACAG 60.615 45.833 4.39 0.00 0.00 3.16
533 534 4.279922 GGGCCAAAACAGTACATAAACAGT 59.720 41.667 4.39 0.00 0.00 3.55
534 535 5.474189 GGGCCAAAACAGTACATAAACAGTA 59.526 40.000 4.39 0.00 0.00 2.74
535 536 6.376177 GGCCAAAACAGTACATAAACAGTAC 58.624 40.000 0.00 0.00 41.59 2.73
536 537 6.016943 GGCCAAAACAGTACATAAACAGTACA 60.017 38.462 0.00 0.00 43.24 2.90
537 538 6.854381 GCCAAAACAGTACATAAACAGTACAC 59.146 38.462 6.30 0.00 43.24 2.90
538 539 7.467539 GCCAAAACAGTACATAAACAGTACACA 60.468 37.037 6.30 0.00 43.24 3.72
539 540 8.564574 CCAAAACAGTACATAAACAGTACACAT 58.435 33.333 6.30 0.00 43.24 3.21
540 541 9.944663 CAAAACAGTACATAAACAGTACACATT 57.055 29.630 6.30 0.00 43.24 2.71
550 551 9.567848 CATAAACAGTACACATTTTTATGGACC 57.432 33.333 0.00 0.00 36.86 4.46
551 552 6.584185 AACAGTACACATTTTTATGGACCC 57.416 37.500 0.00 0.00 0.00 4.46
552 553 5.014202 ACAGTACACATTTTTATGGACCCC 58.986 41.667 0.00 0.00 0.00 4.95
553 554 4.401202 CAGTACACATTTTTATGGACCCCC 59.599 45.833 0.00 0.00 0.00 5.40
564 565 2.785357 TGGACCCCCAATTTGTCTTT 57.215 45.000 0.00 0.00 40.09 2.52
565 566 3.053359 TGGACCCCCAATTTGTCTTTT 57.947 42.857 0.00 0.00 40.09 2.27
566 567 3.388913 TGGACCCCCAATTTGTCTTTTT 58.611 40.909 0.00 0.00 40.09 1.94
585 586 4.997905 TTTTCTGAGAGCTGATCAAACG 57.002 40.909 0.00 0.00 0.00 3.60
586 587 3.667497 TTCTGAGAGCTGATCAAACGT 57.333 42.857 0.00 0.00 0.00 3.99
587 588 3.223423 TCTGAGAGCTGATCAAACGTC 57.777 47.619 0.00 0.00 0.00 4.34
588 589 2.094494 TCTGAGAGCTGATCAAACGTCC 60.094 50.000 0.00 0.00 0.00 4.79
589 590 1.618343 TGAGAGCTGATCAAACGTCCA 59.382 47.619 0.00 0.00 0.00 4.02
590 591 2.037121 TGAGAGCTGATCAAACGTCCAA 59.963 45.455 0.00 0.00 0.00 3.53
591 592 3.067106 GAGAGCTGATCAAACGTCCAAA 58.933 45.455 0.00 0.00 0.00 3.28
592 593 3.679389 AGAGCTGATCAAACGTCCAAAT 58.321 40.909 0.00 0.00 0.00 2.32
593 594 3.438087 AGAGCTGATCAAACGTCCAAATG 59.562 43.478 0.00 0.00 0.00 2.32
594 595 3.411446 AGCTGATCAAACGTCCAAATGA 58.589 40.909 0.00 0.00 0.00 2.57
595 596 3.189287 AGCTGATCAAACGTCCAAATGAC 59.811 43.478 0.00 0.00 40.81 3.06
596 597 3.189287 GCTGATCAAACGTCCAAATGACT 59.811 43.478 0.00 0.00 42.13 3.41
597 598 4.320494 GCTGATCAAACGTCCAAATGACTT 60.320 41.667 0.00 0.00 42.13 3.01
598 599 5.107109 TGATCAAACGTCCAAATGACTTG 57.893 39.130 0.00 0.00 42.13 3.16
599 600 4.819088 TGATCAAACGTCCAAATGACTTGA 59.181 37.500 0.00 0.00 40.40 3.02
600 601 5.298026 TGATCAAACGTCCAAATGACTTGAA 59.702 36.000 0.00 0.00 39.89 2.69
601 602 5.568685 TCAAACGTCCAAATGACTTGAAA 57.431 34.783 0.00 0.00 42.13 2.69
602 603 6.142818 TCAAACGTCCAAATGACTTGAAAT 57.857 33.333 0.00 0.00 42.13 2.17
603 604 6.568869 TCAAACGTCCAAATGACTTGAAATT 58.431 32.000 0.00 0.00 42.13 1.82
604 605 7.038659 TCAAACGTCCAAATGACTTGAAATTT 58.961 30.769 0.00 0.00 42.13 1.82
605 606 6.826893 AACGTCCAAATGACTTGAAATTTG 57.173 33.333 0.00 0.00 42.13 2.32
606 607 6.142818 ACGTCCAAATGACTTGAAATTTGA 57.857 33.333 9.16 0.00 43.41 2.69
607 608 6.568869 ACGTCCAAATGACTTGAAATTTGAA 58.431 32.000 9.16 0.00 43.41 2.69
608 609 6.697019 ACGTCCAAATGACTTGAAATTTGAAG 59.303 34.615 14.85 14.85 43.41 3.02
609 610 6.697019 CGTCCAAATGACTTGAAATTTGAAGT 59.303 34.615 20.93 20.93 43.41 3.01
610 611 7.306167 CGTCCAAATGACTTGAAATTTGAAGTG 60.306 37.037 24.89 11.66 43.41 3.16
611 612 6.985645 TCCAAATGACTTGAAATTTGAAGTGG 59.014 34.615 24.89 18.82 43.41 4.00
612 613 6.203338 CCAAATGACTTGAAATTTGAAGTGGG 59.797 38.462 24.89 14.54 43.41 4.61
613 614 6.729690 AATGACTTGAAATTTGAAGTGGGA 57.270 33.333 24.89 10.81 34.76 4.37
614 615 5.514274 TGACTTGAAATTTGAAGTGGGAC 57.486 39.130 24.89 12.48 34.76 4.46
615 616 5.200483 TGACTTGAAATTTGAAGTGGGACT 58.800 37.500 24.89 2.00 34.76 3.85
616 617 5.299279 TGACTTGAAATTTGAAGTGGGACTC 59.701 40.000 24.89 11.53 34.76 3.36
617 618 5.200483 ACTTGAAATTTGAAGTGGGACTCA 58.800 37.500 20.27 0.00 33.36 3.41
618 619 5.067805 ACTTGAAATTTGAAGTGGGACTCAC 59.932 40.000 20.27 0.00 46.39 3.51
626 627 2.911928 TGGGACTCACGCACCAAA 59.088 55.556 0.00 0.00 36.54 3.28
627 628 1.454104 TGGGACTCACGCACCAAAT 59.546 52.632 0.00 0.00 36.54 2.32
628 629 0.179004 TGGGACTCACGCACCAAATT 60.179 50.000 0.00 0.00 36.54 1.82
629 630 0.240945 GGGACTCACGCACCAAATTG 59.759 55.000 0.00 0.00 0.00 2.32
630 631 0.951558 GGACTCACGCACCAAATTGT 59.048 50.000 0.00 0.00 0.00 2.71
631 632 1.069227 GGACTCACGCACCAAATTGTC 60.069 52.381 0.00 0.00 0.00 3.18
632 633 1.873591 GACTCACGCACCAAATTGTCT 59.126 47.619 0.00 0.00 0.00 3.41
633 634 3.064207 GACTCACGCACCAAATTGTCTA 58.936 45.455 0.00 0.00 0.00 2.59
634 635 2.806244 ACTCACGCACCAAATTGTCTAC 59.194 45.455 0.00 0.00 0.00 2.59
635 636 2.147958 TCACGCACCAAATTGTCTACC 58.852 47.619 0.00 0.00 0.00 3.18
636 637 1.199097 CACGCACCAAATTGTCTACCC 59.801 52.381 0.00 0.00 0.00 3.69
637 638 0.808755 CGCACCAAATTGTCTACCCC 59.191 55.000 0.00 0.00 0.00 4.95
638 639 1.884497 CGCACCAAATTGTCTACCCCA 60.884 52.381 0.00 0.00 0.00 4.96
639 640 2.456577 GCACCAAATTGTCTACCCCAT 58.543 47.619 0.00 0.00 0.00 4.00
640 641 3.626930 GCACCAAATTGTCTACCCCATA 58.373 45.455 0.00 0.00 0.00 2.74
641 642 4.020543 GCACCAAATTGTCTACCCCATAA 58.979 43.478 0.00 0.00 0.00 1.90
642 643 4.464597 GCACCAAATTGTCTACCCCATAAA 59.535 41.667 0.00 0.00 0.00 1.40
643 644 5.046950 GCACCAAATTGTCTACCCCATAAAA 60.047 40.000 0.00 0.00 0.00 1.52
644 645 6.519213 GCACCAAATTGTCTACCCCATAAAAA 60.519 38.462 0.00 0.00 0.00 1.94
703 704 0.591170 TTTTCAGTAAGCGCAGGTGC 59.409 50.000 11.47 0.00 39.47 5.01
704 705 0.533978 TTTCAGTAAGCGCAGGTGCA 60.534 50.000 11.47 0.00 42.21 4.57
705 706 0.950555 TTCAGTAAGCGCAGGTGCAG 60.951 55.000 11.47 0.00 42.21 4.41
706 707 1.374631 CAGTAAGCGCAGGTGCAGA 60.375 57.895 11.47 0.00 42.21 4.26
707 708 0.742281 CAGTAAGCGCAGGTGCAGAT 60.742 55.000 11.47 0.00 42.21 2.90
708 709 0.742281 AGTAAGCGCAGGTGCAGATG 60.742 55.000 11.47 0.00 42.21 2.90
709 710 0.740868 GTAAGCGCAGGTGCAGATGA 60.741 55.000 11.47 0.00 42.21 2.92
710 711 0.460811 TAAGCGCAGGTGCAGATGAG 60.461 55.000 11.47 0.18 42.21 2.90
711 712 3.873883 GCGCAGGTGCAGATGAGC 61.874 66.667 0.30 10.34 42.21 4.26
712 713 2.125229 CGCAGGTGCAGATGAGCT 60.125 61.111 2.33 0.00 42.21 4.09
713 714 2.172372 CGCAGGTGCAGATGAGCTC 61.172 63.158 6.82 6.82 42.21 4.09
714 715 2.172372 GCAGGTGCAGATGAGCTCG 61.172 63.158 9.64 0.00 41.59 5.03
715 716 1.521010 CAGGTGCAGATGAGCTCGG 60.521 63.158 9.64 0.00 34.99 4.63
716 717 1.986757 AGGTGCAGATGAGCTCGGT 60.987 57.895 9.64 0.00 34.99 4.69
717 718 1.812922 GGTGCAGATGAGCTCGGTG 60.813 63.158 9.64 7.30 34.99 4.94
718 719 2.125391 TGCAGATGAGCTCGGTGC 60.125 61.111 21.70 21.70 43.29 5.01
719 720 2.125391 GCAGATGAGCTCGGTGCA 60.125 61.111 22.91 2.48 45.94 4.57
720 721 2.172372 GCAGATGAGCTCGGTGCAG 61.172 63.158 22.91 7.80 45.94 4.41
721 722 1.514553 CAGATGAGCTCGGTGCAGA 59.485 57.895 9.64 0.00 45.94 4.26
722 723 0.528033 CAGATGAGCTCGGTGCAGAG 60.528 60.000 9.64 0.00 45.94 3.35
723 724 0.682532 AGATGAGCTCGGTGCAGAGA 60.683 55.000 9.64 0.00 45.94 3.10
724 725 0.388659 GATGAGCTCGGTGCAGAGAT 59.611 55.000 9.64 0.00 45.94 2.75
725 726 4.728058 GAGCTCGGTGCAGAGATC 57.272 61.111 7.13 6.33 44.75 2.75
726 727 2.114638 GAGCTCGGTGCAGAGATCT 58.885 57.895 12.55 0.00 46.67 2.75
727 728 0.459489 GAGCTCGGTGCAGAGATCTT 59.541 55.000 12.55 0.00 46.67 2.40
728 729 1.678627 GAGCTCGGTGCAGAGATCTTA 59.321 52.381 12.55 0.00 46.67 2.10
729 730 2.099921 GAGCTCGGTGCAGAGATCTTAA 59.900 50.000 12.55 0.00 46.67 1.85
759 760 5.069781 GGATGAGTGTATGAGTAGGCTTCTT 59.930 44.000 0.00 0.00 0.00 2.52
791 1539 2.650196 CCAACCAATGGCCACACG 59.350 61.111 8.16 0.00 43.80 4.49
834 1587 0.902984 TTTGGCTACTCTGCTCCGGA 60.903 55.000 2.93 2.93 0.00 5.14
835 1588 0.902984 TTGGCTACTCTGCTCCGGAA 60.903 55.000 5.23 0.00 0.00 4.30
838 1591 1.576356 GCTACTCTGCTCCGGAAATG 58.424 55.000 5.23 0.00 0.00 2.32
839 1592 1.134670 GCTACTCTGCTCCGGAAATGT 60.135 52.381 5.23 3.09 0.00 2.71
840 1593 2.678190 GCTACTCTGCTCCGGAAATGTT 60.678 50.000 5.23 0.00 0.00 2.71
842 1595 3.252974 ACTCTGCTCCGGAAATGTTAG 57.747 47.619 5.23 1.02 0.00 2.34
843 1596 1.936547 CTCTGCTCCGGAAATGTTAGC 59.063 52.381 5.23 3.80 0.00 3.09
859 1635 3.319972 TGTTAGCAGTAAACCACGACTCT 59.680 43.478 0.00 0.00 0.00 3.24
893 1669 2.940510 CATGTGCATGCGTTCGCG 60.941 61.111 14.09 0.00 44.73 5.87
894 1670 3.422303 ATGTGCATGCGTTCGCGT 61.422 55.556 14.09 9.35 43.62 6.01
919 1695 0.158096 CGTGCGTCTGTGTTACGTTC 59.842 55.000 0.00 0.00 42.26 3.95
939 1717 4.000557 GTGTGTGTGCGCCTCGTG 62.001 66.667 4.18 0.00 0.00 4.35
987 1765 1.152860 TTGGTTGCAAAGGAGCCGA 60.153 52.632 0.00 0.00 0.00 5.54
990 1768 1.302511 GTTGCAAAGGAGCCGAGGA 60.303 57.895 0.00 0.00 0.00 3.71
1004 1782 1.005156 GAGGAGATCCGAGCATGCC 60.005 63.158 15.66 4.99 42.08 4.40
1005 1783 2.356793 GGAGATCCGAGCATGCCG 60.357 66.667 15.66 17.16 0.00 5.69
1007 1785 3.873026 GAGATCCGAGCATGCCGGG 62.873 68.421 33.02 25.91 46.47 5.73
1072 1853 2.188469 GCGGCCGGTTATTGGAGA 59.812 61.111 29.38 0.00 0.00 3.71
1095 1879 3.183323 CGGCGTGGCGTTTATCGT 61.183 61.111 7.74 0.00 42.13 3.73
1148 1932 2.602267 TTCCACCTTCGCCCGAGA 60.602 61.111 0.00 0.00 0.00 4.04
1156 1940 1.867919 CTTCGCCCGAGAGAGTGTGT 61.868 60.000 0.00 0.00 0.00 3.72
1157 1941 2.126307 CGCCCGAGAGAGTGTGTG 60.126 66.667 0.00 0.00 0.00 3.82
1158 1942 2.920645 CGCCCGAGAGAGTGTGTGT 61.921 63.158 0.00 0.00 0.00 3.72
1159 1943 1.373497 GCCCGAGAGAGTGTGTGTG 60.373 63.158 0.00 0.00 0.00 3.82
1168 1952 3.072330 AGAGAGTGTGTGTGAGAGAGAGA 59.928 47.826 0.00 0.00 0.00 3.10
1296 2090 2.995574 CCCGAGACCGTCCACCTT 60.996 66.667 0.00 0.00 0.00 3.50
1359 2153 2.670148 GGGAGTCGTCCTGCCCAAT 61.670 63.158 0.00 0.00 45.62 3.16
1401 2243 3.164011 GAACACCTCGCGTCGTCG 61.164 66.667 5.77 0.00 40.37 5.12
1405 2247 3.653009 ACCTCGCGTCGTCGTTCA 61.653 61.111 5.77 0.00 39.49 3.18
1829 4408 4.143333 CGCCGACGGGGACATCTT 62.143 66.667 25.56 0.00 37.91 2.40
1950 4571 2.046023 CCGGTGCAGGAATGCTCA 60.046 61.111 0.00 0.00 35.49 4.26
1979 4600 1.025113 TCGTCGGAGAGCGTGAAGAT 61.025 55.000 0.00 0.00 36.95 2.40
2604 5277 0.107508 TAGGAGGGTCGACGTACTGG 60.108 60.000 9.92 0.00 29.24 4.00
2605 5278 1.676967 GGAGGGTCGACGTACTGGT 60.677 63.158 9.92 0.00 0.00 4.00
2606 5279 0.392998 GGAGGGTCGACGTACTGGTA 60.393 60.000 9.92 0.00 0.00 3.25
2607 5280 0.729690 GAGGGTCGACGTACTGGTAC 59.270 60.000 9.92 1.18 0.00 3.34
2608 5281 0.326264 AGGGTCGACGTACTGGTACT 59.674 55.000 9.92 0.00 34.04 2.73
2609 5282 0.449388 GGGTCGACGTACTGGTACTG 59.551 60.000 9.92 5.59 34.04 2.74
2651 5324 2.651361 CACCAGAGCGTCGAAGGT 59.349 61.111 1.81 1.81 0.00 3.50
2658 5331 1.566018 GAGCGTCGAAGGTGTTTGGG 61.566 60.000 8.02 0.00 0.00 4.12
2659 5332 2.943653 CGTCGAAGGTGTTTGGGC 59.056 61.111 0.00 0.00 0.00 5.36
2660 5333 1.890041 CGTCGAAGGTGTTTGGGCA 60.890 57.895 0.00 0.00 0.00 5.36
2661 5334 1.841663 CGTCGAAGGTGTTTGGGCAG 61.842 60.000 0.00 0.00 0.00 4.85
2662 5335 0.818040 GTCGAAGGTGTTTGGGCAGT 60.818 55.000 0.00 0.00 0.00 4.40
2665 5338 1.457455 AAGGTGTTTGGGCAGTGGG 60.457 57.895 0.00 0.00 0.00 4.61
2666 5339 2.917227 GGTGTTTGGGCAGTGGGG 60.917 66.667 0.00 0.00 0.00 4.96
2667 5340 3.615709 GTGTTTGGGCAGTGGGGC 61.616 66.667 0.00 0.00 42.44 5.80
2670 5343 3.831637 TTTGGGCAGTGGGGCTGT 61.832 61.111 0.00 0.00 46.64 4.40
2671 5344 4.601794 TTGGGCAGTGGGGCTGTG 62.602 66.667 0.00 0.00 46.64 3.66
2693 5366 3.569916 GCATGCATCAGCCATTCAG 57.430 52.632 14.21 0.00 41.13 3.02
2730 5403 9.327628 GGAAGTCTACTGTATTATTTTTCCTCC 57.672 37.037 0.00 0.00 0.00 4.30
2733 5406 9.892130 AGTCTACTGTATTATTTTTCCTCCAAG 57.108 33.333 0.00 0.00 0.00 3.61
2738 5411 9.807921 ACTGTATTATTTTTCCTCCAAGAAAGA 57.192 29.630 0.00 0.00 37.09 2.52
2773 5446 9.603921 AAAGTGGATAATATGCTTCAAAATTGG 57.396 29.630 0.00 0.00 0.00 3.16
2774 5447 7.729116 AGTGGATAATATGCTTCAAAATTGGG 58.271 34.615 0.00 0.00 0.00 4.12
2775 5448 7.564660 AGTGGATAATATGCTTCAAAATTGGGA 59.435 33.333 0.00 0.00 0.00 4.37
2776 5449 8.203485 GTGGATAATATGCTTCAAAATTGGGAA 58.797 33.333 0.00 0.00 0.00 3.97
2777 5450 8.766476 TGGATAATATGCTTCAAAATTGGGAAA 58.234 29.630 0.00 0.00 0.00 3.13
2778 5451 9.045223 GGATAATATGCTTCAAAATTGGGAAAC 57.955 33.333 0.00 0.00 0.00 2.78
2779 5452 6.966435 AATATGCTTCAAAATTGGGAAACG 57.034 33.333 0.00 0.00 0.00 3.60
2780 5453 3.810310 TGCTTCAAAATTGGGAAACGT 57.190 38.095 0.00 0.00 0.00 3.99
2781 5454 4.130286 TGCTTCAAAATTGGGAAACGTT 57.870 36.364 0.00 0.00 0.00 3.99
2782 5455 3.868077 TGCTTCAAAATTGGGAAACGTTG 59.132 39.130 0.00 0.00 0.00 4.10
2783 5456 4.116238 GCTTCAAAATTGGGAAACGTTGA 58.884 39.130 0.00 0.00 0.00 3.18
2784 5457 4.209080 GCTTCAAAATTGGGAAACGTTGAG 59.791 41.667 0.00 0.00 0.00 3.02
2785 5458 4.993029 TCAAAATTGGGAAACGTTGAGT 57.007 36.364 0.00 0.00 0.00 3.41
2786 5459 6.452494 TTCAAAATTGGGAAACGTTGAGTA 57.548 33.333 0.00 0.00 0.00 2.59
2787 5460 5.823353 TCAAAATTGGGAAACGTTGAGTAC 58.177 37.500 0.00 0.00 0.00 2.73
2788 5461 4.841443 AAATTGGGAAACGTTGAGTACC 57.159 40.909 0.00 0.00 0.00 3.34
2789 5462 1.868469 TTGGGAAACGTTGAGTACCG 58.132 50.000 0.00 0.00 32.65 4.02
2790 5463 0.033781 TGGGAAACGTTGAGTACCGG 59.966 55.000 0.00 0.00 32.65 5.28
2791 5464 1.293963 GGGAAACGTTGAGTACCGGC 61.294 60.000 0.00 0.00 32.65 6.13
2792 5465 1.620413 GGAAACGTTGAGTACCGGCG 61.620 60.000 0.00 0.00 0.00 6.46
2793 5466 1.620413 GAAACGTTGAGTACCGGCGG 61.620 60.000 27.06 27.06 0.00 6.13
2824 5497 2.791927 CACTGACCGCTCGATCGA 59.208 61.111 18.32 18.32 0.00 3.59
2847 5520 3.498774 ATTCCTGTAGCCATCCATCAC 57.501 47.619 0.00 0.00 0.00 3.06
2854 5527 1.451927 GCCATCCATCACCGCTCAA 60.452 57.895 0.00 0.00 0.00 3.02
2855 5528 1.718757 GCCATCCATCACCGCTCAAC 61.719 60.000 0.00 0.00 0.00 3.18
2908 5581 0.322456 TCCTTTCTTGGCCCATCACG 60.322 55.000 0.00 0.00 0.00 4.35
3000 5674 1.699634 ACCAACTTCTTGCTGAGGCTA 59.300 47.619 0.00 0.00 39.59 3.93
3014 5688 0.550147 AGGCTATGAGGTGGGTTGGT 60.550 55.000 0.00 0.00 0.00 3.67
3015 5689 0.107165 GGCTATGAGGTGGGTTGGTC 60.107 60.000 0.00 0.00 0.00 4.02
3016 5690 0.618458 GCTATGAGGTGGGTTGGTCA 59.382 55.000 0.00 0.00 0.00 4.02
3052 5726 1.525535 GCCGGATGAAGCTGCATCT 60.526 57.895 29.81 0.28 43.25 2.90
3079 5753 0.321298 GGCTATGTTGTGACCGTGGT 60.321 55.000 0.00 0.00 0.00 4.16
3187 5862 2.903547 GAACCAACGTGCGGCATGT 61.904 57.895 21.53 21.53 34.83 3.21
3240 5916 4.849329 GGTGGAGCTACGACGCGG 62.849 72.222 12.47 0.00 34.40 6.46
3330 6008 6.429078 GCTACATAAATGAATGGCAGAGATGA 59.571 38.462 0.00 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.298339 CCCGCATCGCCGAAAAATC 60.298 57.895 0.00 0.00 0.00 2.17
2 3 4.109693 GCCCGCATCGCCGAAAAA 62.110 61.111 0.00 0.00 0.00 1.94
19 20 2.352915 GGAGATGACGCGAGCTCG 60.353 66.667 31.37 31.37 43.27 5.03
20 21 1.008995 GAGGAGATGACGCGAGCTC 60.009 63.158 15.93 9.14 0.00 4.09
21 22 1.453015 AGAGGAGATGACGCGAGCT 60.453 57.895 15.93 0.00 0.00 4.09
22 23 1.299014 CAGAGGAGATGACGCGAGC 60.299 63.158 15.93 4.68 0.00 5.03
23 24 1.299014 GCAGAGGAGATGACGCGAG 60.299 63.158 15.93 0.00 0.00 5.03
24 25 1.719725 GAGCAGAGGAGATGACGCGA 61.720 60.000 15.93 0.00 0.00 5.87
25 26 1.299014 GAGCAGAGGAGATGACGCG 60.299 63.158 3.53 3.53 0.00 6.01
26 27 1.299014 CGAGCAGAGGAGATGACGC 60.299 63.158 0.00 0.00 0.00 5.19
27 28 1.299014 GCGAGCAGAGGAGATGACG 60.299 63.158 0.00 0.00 0.00 4.35
28 29 0.527385 GTGCGAGCAGAGGAGATGAC 60.527 60.000 0.00 0.00 0.00 3.06
29 30 1.812525 GTGCGAGCAGAGGAGATGA 59.187 57.895 0.00 0.00 0.00 2.92
30 31 1.588403 CGTGCGAGCAGAGGAGATG 60.588 63.158 0.00 0.00 0.00 2.90
31 32 1.723608 CTCGTGCGAGCAGAGGAGAT 61.724 60.000 8.71 0.00 35.31 2.75
32 33 2.359975 TCGTGCGAGCAGAGGAGA 60.360 61.111 0.00 0.00 0.00 3.71
33 34 2.101965 CTCGTGCGAGCAGAGGAG 59.898 66.667 8.71 2.38 35.31 3.69
36 37 4.504916 CCCCTCGTGCGAGCAGAG 62.505 72.222 15.32 7.65 40.69 3.35
38 39 4.504916 CTCCCCTCGTGCGAGCAG 62.505 72.222 15.32 8.95 40.69 4.24
40 41 3.708220 CTTCTCCCCTCGTGCGAGC 62.708 68.421 15.32 0.00 40.69 5.03
41 42 2.492090 CTTCTCCCCTCGTGCGAG 59.508 66.667 13.99 13.99 41.63 5.03
42 43 3.760035 GCTTCTCCCCTCGTGCGA 61.760 66.667 0.00 0.00 0.00 5.10
47 48 4.856607 GACGCGCTTCTCCCCTCG 62.857 72.222 5.73 0.00 0.00 4.63
48 49 3.760035 TGACGCGCTTCTCCCCTC 61.760 66.667 15.44 0.00 0.00 4.30
49 50 4.070552 GTGACGCGCTTCTCCCCT 62.071 66.667 15.44 0.00 0.00 4.79
52 53 2.707849 TAGGGTGACGCGCTTCTCC 61.708 63.158 22.68 22.68 40.99 3.71
53 54 1.516603 GTAGGGTGACGCGCTTCTC 60.517 63.158 15.44 11.29 40.99 2.87
54 55 2.572284 GTAGGGTGACGCGCTTCT 59.428 61.111 15.44 0.00 40.99 2.85
55 56 2.508663 GGTAGGGTGACGCGCTTC 60.509 66.667 5.73 6.99 40.99 3.86
56 57 4.078516 GGGTAGGGTGACGCGCTT 62.079 66.667 5.73 0.00 40.99 4.68
58 59 4.814294 CTGGGTAGGGTGACGCGC 62.814 72.222 5.73 0.00 35.12 6.86
59 60 4.814294 GCTGGGTAGGGTGACGCG 62.814 72.222 3.53 3.53 35.12 6.01
60 61 4.468689 GGCTGGGTAGGGTGACGC 62.469 72.222 0.00 0.00 0.00 5.19
61 62 2.683933 AGGCTGGGTAGGGTGACG 60.684 66.667 0.00 0.00 0.00 4.35
62 63 2.722201 CGAGGCTGGGTAGGGTGAC 61.722 68.421 0.00 0.00 0.00 3.67
63 64 2.363795 CGAGGCTGGGTAGGGTGA 60.364 66.667 0.00 0.00 0.00 4.02
64 65 4.162690 GCGAGGCTGGGTAGGGTG 62.163 72.222 0.00 0.00 0.00 4.61
77 78 4.200283 GAGTCTGGCTCGGGCGAG 62.200 72.222 13.88 13.88 44.03 5.03
84 85 1.791103 ATAGCTCGCGAGTCTGGCTC 61.791 60.000 34.46 17.58 40.77 4.70
85 86 1.388065 AATAGCTCGCGAGTCTGGCT 61.388 55.000 34.46 27.50 37.08 4.75
86 87 1.066587 AATAGCTCGCGAGTCTGGC 59.933 57.895 34.46 22.22 0.00 4.85
87 88 1.211818 GCAATAGCTCGCGAGTCTGG 61.212 60.000 34.46 23.32 37.91 3.86
88 89 2.211675 GCAATAGCTCGCGAGTCTG 58.788 57.895 34.46 25.19 37.91 3.51
89 90 4.719997 GCAATAGCTCGCGAGTCT 57.280 55.556 34.46 30.50 37.91 3.24
99 100 1.160329 ACGCCCGAATCAGCAATAGC 61.160 55.000 0.00 0.00 42.56 2.97
100 101 1.299541 AACGCCCGAATCAGCAATAG 58.700 50.000 0.00 0.00 0.00 1.73
101 102 1.668751 GAAACGCCCGAATCAGCAATA 59.331 47.619 0.00 0.00 0.00 1.90
102 103 0.451783 GAAACGCCCGAATCAGCAAT 59.548 50.000 0.00 0.00 0.00 3.56
103 104 1.582610 GGAAACGCCCGAATCAGCAA 61.583 55.000 0.00 0.00 0.00 3.91
104 105 2.038269 GGAAACGCCCGAATCAGCA 61.038 57.895 0.00 0.00 0.00 4.41
105 106 2.791927 GGAAACGCCCGAATCAGC 59.208 61.111 0.00 0.00 0.00 4.26
114 115 2.679996 ATGCCCAAGGGAAACGCC 60.680 61.111 9.92 0.00 37.50 5.68
115 116 2.573340 CATGCCCAAGGGAAACGC 59.427 61.111 9.92 0.00 37.50 4.84
116 117 3.005540 GCCATGCCCAAGGGAAACG 62.006 63.158 9.92 0.00 37.50 3.60
117 118 2.659063 GGCCATGCCCAAGGGAAAC 61.659 63.158 9.92 0.00 44.06 2.78
118 119 2.284552 GGCCATGCCCAAGGGAAA 60.285 61.111 9.92 0.00 44.06 3.13
129 130 0.676466 TAAAGCACGTCCAGGCCATG 60.676 55.000 5.01 0.00 0.00 3.66
130 131 0.037590 TTAAAGCACGTCCAGGCCAT 59.962 50.000 5.01 0.00 0.00 4.40
131 132 0.605319 CTTAAAGCACGTCCAGGCCA 60.605 55.000 5.01 0.00 0.00 5.36
132 133 1.305930 CCTTAAAGCACGTCCAGGCC 61.306 60.000 0.00 0.00 0.00 5.19
133 134 0.605589 ACCTTAAAGCACGTCCAGGC 60.606 55.000 0.00 0.00 0.00 4.85
134 135 1.439679 GACCTTAAAGCACGTCCAGG 58.560 55.000 0.00 0.00 0.00 4.45
135 136 1.439679 GGACCTTAAAGCACGTCCAG 58.560 55.000 0.00 0.00 43.58 3.86
136 137 3.618171 GGACCTTAAAGCACGTCCA 57.382 52.632 0.00 0.00 43.58 4.02
137 138 1.737793 CATGGACCTTAAAGCACGTCC 59.262 52.381 0.00 0.00 44.24 4.79
138 139 1.130561 GCATGGACCTTAAAGCACGTC 59.869 52.381 0.00 0.00 0.00 4.34
139 140 1.165270 GCATGGACCTTAAAGCACGT 58.835 50.000 0.00 0.00 0.00 4.49
140 141 0.096976 CGCATGGACCTTAAAGCACG 59.903 55.000 0.00 0.00 0.00 5.34
141 142 1.448985 TCGCATGGACCTTAAAGCAC 58.551 50.000 0.00 0.00 0.00 4.40
142 143 2.016318 CATCGCATGGACCTTAAAGCA 58.984 47.619 0.00 0.00 0.00 3.91
143 144 1.268743 GCATCGCATGGACCTTAAAGC 60.269 52.381 0.00 0.00 0.00 3.51
144 145 1.003545 CGCATCGCATGGACCTTAAAG 60.004 52.381 0.00 0.00 0.00 1.85
145 146 1.013596 CGCATCGCATGGACCTTAAA 58.986 50.000 0.00 0.00 0.00 1.52
146 147 0.813610 CCGCATCGCATGGACCTTAA 60.814 55.000 0.00 0.00 0.00 1.85
147 148 1.227527 CCGCATCGCATGGACCTTA 60.228 57.895 0.00 0.00 0.00 2.69
148 149 2.514592 CCGCATCGCATGGACCTT 60.515 61.111 0.00 0.00 0.00 3.50
149 150 4.552365 CCCGCATCGCATGGACCT 62.552 66.667 0.00 0.00 0.00 3.85
166 167 4.374702 CTGCGTTCACTGTGCGGC 62.375 66.667 2.12 6.75 0.00 6.53
167 168 2.943345 GACTGCGTTCACTGTGCGG 61.943 63.158 2.12 0.00 40.79 5.69
168 169 1.761244 TTGACTGCGTTCACTGTGCG 61.761 55.000 2.12 3.13 0.00 5.34
169 170 0.588252 ATTGACTGCGTTCACTGTGC 59.412 50.000 2.12 0.00 0.00 4.57
170 171 1.866601 TGATTGACTGCGTTCACTGTG 59.133 47.619 0.17 0.17 0.00 3.66
171 172 2.238942 TGATTGACTGCGTTCACTGT 57.761 45.000 0.00 0.00 0.00 3.55
172 173 3.291585 GTTTGATTGACTGCGTTCACTG 58.708 45.455 0.00 0.00 0.00 3.66
173 174 2.032894 CGTTTGATTGACTGCGTTCACT 60.033 45.455 0.00 0.00 0.00 3.41
174 175 2.298300 CGTTTGATTGACTGCGTTCAC 58.702 47.619 0.00 0.00 0.00 3.18
175 176 1.262950 CCGTTTGATTGACTGCGTTCA 59.737 47.619 0.00 0.00 0.00 3.18
176 177 1.399727 CCCGTTTGATTGACTGCGTTC 60.400 52.381 0.00 0.00 0.00 3.95
177 178 0.591170 CCCGTTTGATTGACTGCGTT 59.409 50.000 0.00 0.00 0.00 4.84
178 179 1.852067 GCCCGTTTGATTGACTGCGT 61.852 55.000 0.00 0.00 0.00 5.24
179 180 1.154225 GCCCGTTTGATTGACTGCG 60.154 57.895 0.00 0.00 0.00 5.18
180 181 1.212751 GGCCCGTTTGATTGACTGC 59.787 57.895 0.00 0.00 0.00 4.40
181 182 0.240945 GTGGCCCGTTTGATTGACTG 59.759 55.000 0.00 0.00 0.00 3.51
182 183 0.110486 AGTGGCCCGTTTGATTGACT 59.890 50.000 0.00 0.00 0.00 3.41
183 184 0.958822 AAGTGGCCCGTTTGATTGAC 59.041 50.000 0.00 0.00 0.00 3.18
184 185 1.611491 GAAAGTGGCCCGTTTGATTGA 59.389 47.619 0.00 0.00 0.00 2.57
185 186 1.613437 AGAAAGTGGCCCGTTTGATTG 59.387 47.619 0.00 0.00 0.00 2.67
186 187 1.995376 AGAAAGTGGCCCGTTTGATT 58.005 45.000 0.00 0.00 0.00 2.57
187 188 1.886542 GAAGAAAGTGGCCCGTTTGAT 59.113 47.619 0.00 0.00 0.00 2.57
188 189 1.314730 GAAGAAAGTGGCCCGTTTGA 58.685 50.000 0.00 0.00 0.00 2.69
189 190 0.313987 GGAAGAAAGTGGCCCGTTTG 59.686 55.000 0.00 0.00 0.00 2.93
190 191 0.826256 GGGAAGAAAGTGGCCCGTTT 60.826 55.000 0.00 0.00 0.00 3.60
191 192 1.228459 GGGAAGAAAGTGGCCCGTT 60.228 57.895 0.00 0.00 0.00 4.44
192 193 2.434774 GGGAAGAAAGTGGCCCGT 59.565 61.111 0.00 0.00 0.00 5.28
194 195 3.062466 GCGGGAAGAAAGTGGCCC 61.062 66.667 0.00 0.00 37.21 5.80
195 196 3.431725 CGCGGGAAGAAAGTGGCC 61.432 66.667 0.00 0.00 0.00 5.36
196 197 4.103103 GCGCGGGAAGAAAGTGGC 62.103 66.667 8.83 0.00 0.00 5.01
197 198 3.788766 CGCGCGGGAAGAAAGTGG 61.789 66.667 24.84 0.00 0.00 4.00
198 199 3.788766 CCGCGCGGGAAGAAAGTG 61.789 66.667 40.50 11.24 38.47 3.16
227 228 0.108851 GTTTGGTTGCCCGCATTAGG 60.109 55.000 0.00 0.00 0.00 2.69
228 229 0.600557 TGTTTGGTTGCCCGCATTAG 59.399 50.000 0.00 0.00 0.00 1.73
229 230 0.315568 GTGTTTGGTTGCCCGCATTA 59.684 50.000 0.00 0.00 0.00 1.90
230 231 1.068921 GTGTTTGGTTGCCCGCATT 59.931 52.632 0.00 0.00 0.00 3.56
231 232 2.733945 GTGTTTGGTTGCCCGCAT 59.266 55.556 0.00 0.00 0.00 4.73
232 233 3.893763 CGTGTTTGGTTGCCCGCA 61.894 61.111 0.00 0.00 0.00 5.69
234 235 4.639171 GGCGTGTTTGGTTGCCCG 62.639 66.667 0.00 0.00 41.70 6.13
236 237 1.457009 TTAGGGCGTGTTTGGTTGCC 61.457 55.000 0.00 0.00 46.82 4.52
237 238 0.039527 CTTAGGGCGTGTTTGGTTGC 60.040 55.000 0.00 0.00 0.00 4.17
238 239 1.314730 ACTTAGGGCGTGTTTGGTTG 58.685 50.000 0.00 0.00 0.00 3.77
239 240 1.951602 GAACTTAGGGCGTGTTTGGTT 59.048 47.619 0.00 0.00 0.00 3.67
240 241 1.142262 AGAACTTAGGGCGTGTTTGGT 59.858 47.619 0.00 0.00 0.00 3.67
241 242 1.892209 AGAACTTAGGGCGTGTTTGG 58.108 50.000 0.00 0.00 0.00 3.28
242 243 2.225727 GGAAGAACTTAGGGCGTGTTTG 59.774 50.000 0.00 0.00 0.00 2.93
243 244 2.158726 TGGAAGAACTTAGGGCGTGTTT 60.159 45.455 0.00 0.00 0.00 2.83
244 245 1.418637 TGGAAGAACTTAGGGCGTGTT 59.581 47.619 0.00 0.00 0.00 3.32
245 246 1.053424 TGGAAGAACTTAGGGCGTGT 58.947 50.000 0.00 0.00 0.00 4.49
246 247 1.002087 AGTGGAAGAACTTAGGGCGTG 59.998 52.381 0.00 0.00 0.00 5.34
247 248 1.275573 GAGTGGAAGAACTTAGGGCGT 59.724 52.381 0.00 0.00 0.00 5.68
248 249 1.275291 TGAGTGGAAGAACTTAGGGCG 59.725 52.381 0.00 0.00 0.00 6.13
249 250 3.274288 CATGAGTGGAAGAACTTAGGGC 58.726 50.000 0.00 0.00 0.00 5.19
250 251 3.054802 AGCATGAGTGGAAGAACTTAGGG 60.055 47.826 0.00 0.00 0.00 3.53
251 252 4.187694 GAGCATGAGTGGAAGAACTTAGG 58.812 47.826 0.00 0.00 0.00 2.69
252 253 3.862267 CGAGCATGAGTGGAAGAACTTAG 59.138 47.826 0.00 0.00 0.00 2.18
253 254 3.849911 CGAGCATGAGTGGAAGAACTTA 58.150 45.455 0.00 0.00 0.00 2.24
254 255 2.693069 CGAGCATGAGTGGAAGAACTT 58.307 47.619 0.00 0.00 0.00 2.66
255 256 1.674221 GCGAGCATGAGTGGAAGAACT 60.674 52.381 0.00 0.00 0.00 3.01
256 257 0.723981 GCGAGCATGAGTGGAAGAAC 59.276 55.000 0.00 0.00 0.00 3.01
257 258 0.321346 TGCGAGCATGAGTGGAAGAA 59.679 50.000 0.00 0.00 0.00 2.52
258 259 0.538584 ATGCGAGCATGAGTGGAAGA 59.461 50.000 10.04 0.00 35.03 2.87
259 260 1.376543 AATGCGAGCATGAGTGGAAG 58.623 50.000 11.64 0.00 36.68 3.46
260 261 2.689553 TAATGCGAGCATGAGTGGAA 57.310 45.000 11.64 0.00 36.68 3.53
261 262 2.916702 ATAATGCGAGCATGAGTGGA 57.083 45.000 11.64 0.00 36.68 4.02
262 263 3.313249 TCAAATAATGCGAGCATGAGTGG 59.687 43.478 11.64 0.91 36.68 4.00
263 264 4.541085 TCAAATAATGCGAGCATGAGTG 57.459 40.909 11.64 6.90 36.68 3.51
264 265 5.762825 ATTCAAATAATGCGAGCATGAGT 57.237 34.783 11.64 0.00 36.68 3.41
265 266 8.738199 ATAAATTCAAATAATGCGAGCATGAG 57.262 30.769 11.64 1.01 36.68 2.90
266 267 9.611284 GTATAAATTCAAATAATGCGAGCATGA 57.389 29.630 11.64 4.26 36.68 3.07
267 268 9.396938 TGTATAAATTCAAATAATGCGAGCATG 57.603 29.630 11.64 0.25 36.68 4.06
268 269 9.964303 TTGTATAAATTCAAATAATGCGAGCAT 57.036 25.926 4.52 4.52 38.46 3.79
269 270 9.449550 CTTGTATAAATTCAAATAATGCGAGCA 57.550 29.630 0.00 0.00 0.00 4.26
270 271 8.905702 CCTTGTATAAATTCAAATAATGCGAGC 58.094 33.333 0.00 0.00 0.00 5.03
271 272 8.905702 GCCTTGTATAAATTCAAATAATGCGAG 58.094 33.333 0.00 0.00 0.00 5.03
272 273 8.629158 AGCCTTGTATAAATTCAAATAATGCGA 58.371 29.630 0.00 0.00 0.00 5.10
273 274 8.801715 AGCCTTGTATAAATTCAAATAATGCG 57.198 30.769 0.00 0.00 0.00 4.73
279 280 9.154847 GCTGAAAAGCCTTGTATAAATTCAAAT 57.845 29.630 0.00 0.00 0.00 2.32
280 281 8.147058 TGCTGAAAAGCCTTGTATAAATTCAAA 58.853 29.630 0.00 0.00 0.00 2.69
281 282 7.665690 TGCTGAAAAGCCTTGTATAAATTCAA 58.334 30.769 0.00 0.00 0.00 2.69
282 283 7.225784 TGCTGAAAAGCCTTGTATAAATTCA 57.774 32.000 0.00 0.00 0.00 2.57
283 284 8.707938 ATTGCTGAAAAGCCTTGTATAAATTC 57.292 30.769 0.00 0.00 0.00 2.17
294 295 9.807649 CACTAAATAAATATTGCTGAAAAGCCT 57.192 29.630 0.00 0.00 0.00 4.58
295 296 9.034544 CCACTAAATAAATATTGCTGAAAAGCC 57.965 33.333 0.00 0.00 0.00 4.35
296 297 9.801873 TCCACTAAATAAATATTGCTGAAAAGC 57.198 29.630 0.00 0.00 0.00 3.51
302 303 9.956720 CCTTCTTCCACTAAATAAATATTGCTG 57.043 33.333 0.00 0.00 0.00 4.41
303 304 9.920946 TCCTTCTTCCACTAAATAAATATTGCT 57.079 29.630 0.00 0.00 0.00 3.91
309 310 7.711339 CGCTACTCCTTCTTCCACTAAATAAAT 59.289 37.037 0.00 0.00 0.00 1.40
310 311 7.039882 CGCTACTCCTTCTTCCACTAAATAAA 58.960 38.462 0.00 0.00 0.00 1.40
311 312 6.154021 ACGCTACTCCTTCTTCCACTAAATAA 59.846 38.462 0.00 0.00 0.00 1.40
312 313 5.655532 ACGCTACTCCTTCTTCCACTAAATA 59.344 40.000 0.00 0.00 0.00 1.40
313 314 4.466726 ACGCTACTCCTTCTTCCACTAAAT 59.533 41.667 0.00 0.00 0.00 1.40
314 315 3.830755 ACGCTACTCCTTCTTCCACTAAA 59.169 43.478 0.00 0.00 0.00 1.85
315 316 3.192844 CACGCTACTCCTTCTTCCACTAA 59.807 47.826 0.00 0.00 0.00 2.24
316 317 2.753452 CACGCTACTCCTTCTTCCACTA 59.247 50.000 0.00 0.00 0.00 2.74
317 318 1.546476 CACGCTACTCCTTCTTCCACT 59.454 52.381 0.00 0.00 0.00 4.00
318 319 1.272769 ACACGCTACTCCTTCTTCCAC 59.727 52.381 0.00 0.00 0.00 4.02
319 320 1.629043 ACACGCTACTCCTTCTTCCA 58.371 50.000 0.00 0.00 0.00 3.53
320 321 2.745515 AACACGCTACTCCTTCTTCC 57.254 50.000 0.00 0.00 0.00 3.46
321 322 2.662156 CGAAACACGCTACTCCTTCTTC 59.338 50.000 0.00 0.00 34.51 2.87
322 323 2.609737 CCGAAACACGCTACTCCTTCTT 60.610 50.000 0.00 0.00 41.07 2.52
323 324 1.067776 CCGAAACACGCTACTCCTTCT 60.068 52.381 0.00 0.00 41.07 2.85
324 325 1.336609 ACCGAAACACGCTACTCCTTC 60.337 52.381 0.00 0.00 41.07 3.46
325 326 0.677842 ACCGAAACACGCTACTCCTT 59.322 50.000 0.00 0.00 41.07 3.36
326 327 0.038526 CACCGAAACACGCTACTCCT 60.039 55.000 0.00 0.00 41.07 3.69
327 328 1.623973 GCACCGAAACACGCTACTCC 61.624 60.000 0.00 0.00 41.07 3.85
328 329 1.623973 GGCACCGAAACACGCTACTC 61.624 60.000 0.00 0.00 41.07 2.59
329 330 1.666872 GGCACCGAAACACGCTACT 60.667 57.895 0.00 0.00 41.07 2.57
330 331 2.674084 GGGCACCGAAACACGCTAC 61.674 63.158 0.00 0.00 40.86 3.58
331 332 2.357760 GGGCACCGAAACACGCTA 60.358 61.111 0.00 0.00 40.86 4.26
343 344 1.077501 TGCAGATAAGCCTGGGCAC 60.078 57.895 14.39 2.74 44.88 5.01
344 345 1.077501 GTGCAGATAAGCCTGGGCA 60.078 57.895 14.39 0.00 44.88 5.36
345 346 1.825622 GGTGCAGATAAGCCTGGGC 60.826 63.158 3.00 3.00 42.33 5.36
346 347 1.152881 GGGTGCAGATAAGCCTGGG 60.153 63.158 0.00 0.00 34.82 4.45
347 348 1.524621 CGGGTGCAGATAAGCCTGG 60.525 63.158 0.00 0.00 34.82 4.45
348 349 0.107456 ATCGGGTGCAGATAAGCCTG 59.893 55.000 0.00 0.00 37.23 4.85
349 350 0.839946 AATCGGGTGCAGATAAGCCT 59.160 50.000 0.00 0.00 32.85 4.58
350 351 2.417719 CTAATCGGGTGCAGATAAGCC 58.582 52.381 0.00 0.00 0.00 4.35
351 352 2.037251 TCCTAATCGGGTGCAGATAAGC 59.963 50.000 0.00 0.00 0.00 3.09
352 353 4.336889 TTCCTAATCGGGTGCAGATAAG 57.663 45.455 0.00 0.00 0.00 1.73
353 354 4.764050 TTTCCTAATCGGGTGCAGATAA 57.236 40.909 0.00 0.00 0.00 1.75
354 355 4.764050 TTTTCCTAATCGGGTGCAGATA 57.236 40.909 0.00 0.00 0.00 1.98
355 356 3.644966 TTTTCCTAATCGGGTGCAGAT 57.355 42.857 0.00 0.00 0.00 2.90
356 357 3.426787 TTTTTCCTAATCGGGTGCAGA 57.573 42.857 0.00 0.00 0.00 4.26
418 419 5.201713 TCAAATTATCCGCCACACAAAAA 57.798 34.783 0.00 0.00 0.00 1.94
419 420 4.855715 TCAAATTATCCGCCACACAAAA 57.144 36.364 0.00 0.00 0.00 2.44
420 421 4.742417 CATCAAATTATCCGCCACACAAA 58.258 39.130 0.00 0.00 0.00 2.83
421 422 3.428725 GCATCAAATTATCCGCCACACAA 60.429 43.478 0.00 0.00 0.00 3.33
422 423 2.098934 GCATCAAATTATCCGCCACACA 59.901 45.455 0.00 0.00 0.00 3.72
423 424 2.731217 GCATCAAATTATCCGCCACAC 58.269 47.619 0.00 0.00 0.00 3.82
424 425 1.333308 CGCATCAAATTATCCGCCACA 59.667 47.619 0.00 0.00 0.00 4.17
425 426 1.333619 ACGCATCAAATTATCCGCCAC 59.666 47.619 0.00 0.00 0.00 5.01
426 427 1.333308 CACGCATCAAATTATCCGCCA 59.667 47.619 0.00 0.00 0.00 5.69
427 428 1.601903 TCACGCATCAAATTATCCGCC 59.398 47.619 0.00 0.00 0.00 6.13
428 429 3.291585 CTTCACGCATCAAATTATCCGC 58.708 45.455 0.00 0.00 0.00 5.54
429 430 3.291585 GCTTCACGCATCAAATTATCCG 58.708 45.455 0.00 0.00 38.92 4.18
430 431 3.550842 GGGCTTCACGCATCAAATTATCC 60.551 47.826 0.00 0.00 41.67 2.59
431 432 3.632189 GGGCTTCACGCATCAAATTATC 58.368 45.455 0.00 0.00 41.67 1.75
432 433 2.033299 CGGGCTTCACGCATCAAATTAT 59.967 45.455 0.00 0.00 41.67 1.28
433 434 1.400142 CGGGCTTCACGCATCAAATTA 59.600 47.619 0.00 0.00 41.67 1.40
434 435 0.171007 CGGGCTTCACGCATCAAATT 59.829 50.000 0.00 0.00 41.67 1.82
435 436 1.802636 CGGGCTTCACGCATCAAAT 59.197 52.632 0.00 0.00 41.67 2.32
436 437 3.262936 CGGGCTTCACGCATCAAA 58.737 55.556 0.00 0.00 41.67 2.69
443 444 1.586154 AATTTGGAGCGGGCTTCACG 61.586 55.000 0.00 0.00 29.99 4.35
444 445 0.603065 AAATTTGGAGCGGGCTTCAC 59.397 50.000 0.00 0.00 29.99 3.18
445 446 0.887933 GAAATTTGGAGCGGGCTTCA 59.112 50.000 0.00 0.00 0.00 3.02
446 447 0.887933 TGAAATTTGGAGCGGGCTTC 59.112 50.000 0.00 0.00 0.00 3.86
447 448 1.273327 CTTGAAATTTGGAGCGGGCTT 59.727 47.619 0.00 0.00 0.00 4.35
448 449 0.890683 CTTGAAATTTGGAGCGGGCT 59.109 50.000 0.00 0.00 0.00 5.19
449 450 0.603065 ACTTGAAATTTGGAGCGGGC 59.397 50.000 0.00 0.00 0.00 6.13
450 451 1.885887 TGACTTGAAATTTGGAGCGGG 59.114 47.619 0.00 0.00 0.00 6.13
451 452 3.855689 ATGACTTGAAATTTGGAGCGG 57.144 42.857 0.00 0.00 0.00 5.52
452 453 5.505165 CAAATGACTTGAAATTTGGAGCG 57.495 39.130 0.00 0.00 39.19 5.03
457 458 8.828644 TCAAATGTCCAAATGACTTGAAATTTG 58.171 29.630 0.00 7.39 44.75 2.32
458 459 8.961294 TCAAATGTCCAAATGACTTGAAATTT 57.039 26.923 0.00 0.00 44.75 1.82
459 460 7.172019 GCTCAAATGTCCAAATGACTTGAAATT 59.828 33.333 0.00 0.00 44.75 1.82
460 461 6.647895 GCTCAAATGTCCAAATGACTTGAAAT 59.352 34.615 0.00 0.00 44.75 2.17
461 462 5.984926 GCTCAAATGTCCAAATGACTTGAAA 59.015 36.000 0.00 0.00 44.75 2.69
462 463 5.068855 TGCTCAAATGTCCAAATGACTTGAA 59.931 36.000 0.00 0.00 44.75 2.69
463 464 4.583907 TGCTCAAATGTCCAAATGACTTGA 59.416 37.500 0.00 0.00 44.75 3.02
464 465 4.873817 TGCTCAAATGTCCAAATGACTTG 58.126 39.130 0.00 0.00 44.75 3.16
465 466 4.560108 GCTGCTCAAATGTCCAAATGACTT 60.560 41.667 0.00 0.00 44.75 3.01
466 467 3.057033 GCTGCTCAAATGTCCAAATGACT 60.057 43.478 0.00 0.00 44.75 3.41
467 468 3.057033 AGCTGCTCAAATGTCCAAATGAC 60.057 43.478 0.00 0.00 44.72 3.06
468 469 3.159472 AGCTGCTCAAATGTCCAAATGA 58.841 40.909 0.00 0.00 0.00 2.57
469 470 3.508762 GAGCTGCTCAAATGTCCAAATG 58.491 45.455 24.02 0.00 0.00 2.32
470 471 2.494870 GGAGCTGCTCAAATGTCCAAAT 59.505 45.455 28.95 0.00 31.08 2.32
471 472 1.888512 GGAGCTGCTCAAATGTCCAAA 59.111 47.619 28.95 0.00 31.08 3.28
472 473 1.538047 GGAGCTGCTCAAATGTCCAA 58.462 50.000 28.95 0.00 31.08 3.53
473 474 0.322816 GGGAGCTGCTCAAATGTCCA 60.323 55.000 28.95 0.00 31.08 4.02
474 475 0.322816 TGGGAGCTGCTCAAATGTCC 60.323 55.000 28.95 19.85 31.08 4.02
475 476 1.093159 CTGGGAGCTGCTCAAATGTC 58.907 55.000 28.95 11.79 31.08 3.06
476 477 0.964358 GCTGGGAGCTGCTCAAATGT 60.964 55.000 28.95 0.00 38.45 2.71
477 478 0.963856 TGCTGGGAGCTGCTCAAATG 60.964 55.000 28.95 16.75 42.97 2.32
478 479 0.251474 TTGCTGGGAGCTGCTCAAAT 60.251 50.000 28.95 0.00 42.97 2.32
479 480 0.467844 TTTGCTGGGAGCTGCTCAAA 60.468 50.000 28.95 18.28 42.97 2.69
480 481 0.467844 TTTTGCTGGGAGCTGCTCAA 60.468 50.000 28.95 16.46 42.97 3.02
481 482 0.467844 TTTTTGCTGGGAGCTGCTCA 60.468 50.000 28.95 11.15 42.97 4.26
482 483 2.344535 TTTTTGCTGGGAGCTGCTC 58.655 52.632 21.17 21.17 42.97 4.26
483 484 4.605064 TTTTTGCTGGGAGCTGCT 57.395 50.000 0.00 0.00 42.97 4.24
497 498 5.859495 TGTTTTGGCCCGATTTATCTTTTT 58.141 33.333 0.00 0.00 0.00 1.94
498 499 5.011635 ACTGTTTTGGCCCGATTTATCTTTT 59.988 36.000 0.00 0.00 0.00 2.27
499 500 4.526650 ACTGTTTTGGCCCGATTTATCTTT 59.473 37.500 0.00 0.00 0.00 2.52
500 501 4.086457 ACTGTTTTGGCCCGATTTATCTT 58.914 39.130 0.00 0.00 0.00 2.40
501 502 3.697166 ACTGTTTTGGCCCGATTTATCT 58.303 40.909 0.00 0.00 0.00 1.98
502 503 4.396790 TGTACTGTTTTGGCCCGATTTATC 59.603 41.667 0.00 0.00 0.00 1.75
503 504 4.337145 TGTACTGTTTTGGCCCGATTTAT 58.663 39.130 0.00 0.00 0.00 1.40
504 505 3.752665 TGTACTGTTTTGGCCCGATTTA 58.247 40.909 0.00 0.00 0.00 1.40
505 506 2.588620 TGTACTGTTTTGGCCCGATTT 58.411 42.857 0.00 0.00 0.00 2.17
506 507 2.279935 TGTACTGTTTTGGCCCGATT 57.720 45.000 0.00 0.00 0.00 3.34
507 508 2.507407 ATGTACTGTTTTGGCCCGAT 57.493 45.000 0.00 0.00 0.00 4.18
508 509 3.420300 TTATGTACTGTTTTGGCCCGA 57.580 42.857 0.00 0.00 0.00 5.14
509 510 3.253677 TGTTTATGTACTGTTTTGGCCCG 59.746 43.478 0.00 0.00 0.00 6.13
510 511 4.279922 ACTGTTTATGTACTGTTTTGGCCC 59.720 41.667 0.00 0.00 0.00 5.80
511 512 5.447624 ACTGTTTATGTACTGTTTTGGCC 57.552 39.130 0.00 0.00 0.00 5.36
512 513 6.854381 GTGTACTGTTTATGTACTGTTTTGGC 59.146 38.462 0.00 0.00 40.44 4.52
513 514 7.921787 TGTGTACTGTTTATGTACTGTTTTGG 58.078 34.615 0.00 0.00 40.44 3.28
514 515 9.944663 AATGTGTACTGTTTATGTACTGTTTTG 57.055 29.630 0.00 0.00 40.44 2.44
524 525 9.567848 GGTCCATAAAAATGTGTACTGTTTATG 57.432 33.333 8.37 8.37 39.89 1.90
525 526 8.745590 GGGTCCATAAAAATGTGTACTGTTTAT 58.254 33.333 0.00 0.00 0.00 1.40
526 527 7.177041 GGGGTCCATAAAAATGTGTACTGTTTA 59.823 37.037 0.00 0.00 0.00 2.01
527 528 6.014925 GGGGTCCATAAAAATGTGTACTGTTT 60.015 38.462 0.00 0.00 0.00 2.83
528 529 5.479027 GGGGTCCATAAAAATGTGTACTGTT 59.521 40.000 0.00 0.00 0.00 3.16
529 530 5.014202 GGGGTCCATAAAAATGTGTACTGT 58.986 41.667 0.00 0.00 0.00 3.55
530 531 4.401202 GGGGGTCCATAAAAATGTGTACTG 59.599 45.833 0.00 0.00 0.00 2.74
531 532 4.044825 TGGGGGTCCATAAAAATGTGTACT 59.955 41.667 0.00 0.00 38.32 2.73
532 533 4.345854 TGGGGGTCCATAAAAATGTGTAC 58.654 43.478 0.00 0.00 38.32 2.90
533 534 4.676799 TGGGGGTCCATAAAAATGTGTA 57.323 40.909 0.00 0.00 38.32 2.90
534 535 3.551635 TGGGGGTCCATAAAAATGTGT 57.448 42.857 0.00 0.00 38.32 3.72
535 536 5.434182 AATTGGGGGTCCATAAAAATGTG 57.566 39.130 0.00 0.00 43.63 3.21
536 537 5.311913 ACAAATTGGGGGTCCATAAAAATGT 59.688 36.000 0.00 0.00 43.63 2.71
537 538 5.814481 ACAAATTGGGGGTCCATAAAAATG 58.186 37.500 0.00 0.00 43.63 2.32
538 539 5.790096 AGACAAATTGGGGGTCCATAAAAAT 59.210 36.000 0.00 0.00 43.63 1.82
539 540 5.158889 AGACAAATTGGGGGTCCATAAAAA 58.841 37.500 0.00 0.00 43.63 1.94
540 541 4.757692 AGACAAATTGGGGGTCCATAAAA 58.242 39.130 0.00 0.00 43.63 1.52
541 542 4.412060 AGACAAATTGGGGGTCCATAAA 57.588 40.909 0.00 0.00 43.63 1.40
542 543 4.412060 AAGACAAATTGGGGGTCCATAA 57.588 40.909 0.00 0.00 43.63 1.90
543 544 4.412060 AAAGACAAATTGGGGGTCCATA 57.588 40.909 0.00 0.00 43.63 2.74
544 545 3.274281 AAAGACAAATTGGGGGTCCAT 57.726 42.857 0.00 0.00 43.63 3.41
545 546 2.785357 AAAGACAAATTGGGGGTCCA 57.215 45.000 0.00 0.00 42.25 4.02
563 564 4.816385 ACGTTTGATCAGCTCTCAGAAAAA 59.184 37.500 0.00 0.00 0.00 1.94
564 565 4.380531 ACGTTTGATCAGCTCTCAGAAAA 58.619 39.130 0.00 0.00 0.00 2.29
565 566 3.990469 GACGTTTGATCAGCTCTCAGAAA 59.010 43.478 0.00 0.00 0.00 2.52
566 567 3.579709 GACGTTTGATCAGCTCTCAGAA 58.420 45.455 0.00 0.00 0.00 3.02
567 568 2.094494 GGACGTTTGATCAGCTCTCAGA 60.094 50.000 0.00 0.00 0.00 3.27
568 569 2.266554 GGACGTTTGATCAGCTCTCAG 58.733 52.381 0.00 0.00 0.00 3.35
569 570 1.618343 TGGACGTTTGATCAGCTCTCA 59.382 47.619 0.00 0.00 0.00 3.27
570 571 2.370281 TGGACGTTTGATCAGCTCTC 57.630 50.000 0.00 0.00 0.00 3.20
571 572 2.839486 TTGGACGTTTGATCAGCTCT 57.161 45.000 0.00 0.00 0.00 4.09
572 573 3.436704 TCATTTGGACGTTTGATCAGCTC 59.563 43.478 0.00 0.00 0.00 4.09
573 574 3.189287 GTCATTTGGACGTTTGATCAGCT 59.811 43.478 0.00 0.00 36.65 4.24
574 575 3.492313 GTCATTTGGACGTTTGATCAGC 58.508 45.455 0.00 0.00 36.65 4.26
586 587 6.985645 CCACTTCAAATTTCAAGTCATTTGGA 59.014 34.615 4.27 0.00 39.76 3.53
587 588 6.203338 CCCACTTCAAATTTCAAGTCATTTGG 59.797 38.462 4.27 3.26 39.76 3.28
588 589 6.985645 TCCCACTTCAAATTTCAAGTCATTTG 59.014 34.615 4.27 0.00 40.39 2.32
589 590 6.986231 GTCCCACTTCAAATTTCAAGTCATTT 59.014 34.615 4.27 0.00 30.06 2.32
590 591 6.324770 AGTCCCACTTCAAATTTCAAGTCATT 59.675 34.615 4.27 0.00 30.06 2.57
591 592 5.835280 AGTCCCACTTCAAATTTCAAGTCAT 59.165 36.000 4.27 0.00 30.06 3.06
592 593 5.200483 AGTCCCACTTCAAATTTCAAGTCA 58.800 37.500 4.27 0.00 30.06 3.41
593 594 5.299279 TGAGTCCCACTTCAAATTTCAAGTC 59.701 40.000 4.27 0.00 30.06 3.01
594 595 5.067805 GTGAGTCCCACTTCAAATTTCAAGT 59.932 40.000 1.06 1.06 42.44 3.16
595 596 5.523369 GTGAGTCCCACTTCAAATTTCAAG 58.477 41.667 0.00 0.00 42.44 3.02
596 597 4.036262 CGTGAGTCCCACTTCAAATTTCAA 59.964 41.667 0.00 0.00 43.53 2.69
597 598 3.563808 CGTGAGTCCCACTTCAAATTTCA 59.436 43.478 0.00 0.00 43.53 2.69
598 599 3.609409 GCGTGAGTCCCACTTCAAATTTC 60.609 47.826 0.00 0.00 43.53 2.17
599 600 2.293399 GCGTGAGTCCCACTTCAAATTT 59.707 45.455 0.00 0.00 43.53 1.82
600 601 1.880027 GCGTGAGTCCCACTTCAAATT 59.120 47.619 0.00 0.00 43.53 1.82
601 602 1.202758 TGCGTGAGTCCCACTTCAAAT 60.203 47.619 0.00 0.00 43.53 2.32
602 603 0.179234 TGCGTGAGTCCCACTTCAAA 59.821 50.000 0.00 0.00 43.53 2.69
603 604 0.531974 GTGCGTGAGTCCCACTTCAA 60.532 55.000 0.00 0.00 43.53 2.69
604 605 1.069090 GTGCGTGAGTCCCACTTCA 59.931 57.895 0.00 0.00 43.53 3.02
605 606 1.668151 GGTGCGTGAGTCCCACTTC 60.668 63.158 5.89 0.00 43.53 3.01
606 607 1.978455 TTGGTGCGTGAGTCCCACTT 61.978 55.000 5.89 0.00 43.53 3.16
607 608 1.978455 TTTGGTGCGTGAGTCCCACT 61.978 55.000 5.89 0.00 43.53 4.00
608 609 0.889186 ATTTGGTGCGTGAGTCCCAC 60.889 55.000 0.00 0.00 42.30 4.61
609 610 0.179004 AATTTGGTGCGTGAGTCCCA 60.179 50.000 0.00 0.00 0.00 4.37
610 611 0.240945 CAATTTGGTGCGTGAGTCCC 59.759 55.000 0.00 0.00 0.00 4.46
611 612 0.951558 ACAATTTGGTGCGTGAGTCC 59.048 50.000 0.78 0.00 0.00 3.85
612 613 1.873591 AGACAATTTGGTGCGTGAGTC 59.126 47.619 0.78 0.00 0.00 3.36
613 614 1.967319 AGACAATTTGGTGCGTGAGT 58.033 45.000 0.78 0.00 0.00 3.41
614 615 2.159627 GGTAGACAATTTGGTGCGTGAG 59.840 50.000 0.78 0.00 0.00 3.51
615 616 2.147958 GGTAGACAATTTGGTGCGTGA 58.852 47.619 0.78 0.00 0.00 4.35
616 617 1.199097 GGGTAGACAATTTGGTGCGTG 59.801 52.381 0.78 0.00 0.00 5.34
617 618 1.530323 GGGTAGACAATTTGGTGCGT 58.470 50.000 0.78 0.00 0.00 5.24
618 619 0.808755 GGGGTAGACAATTTGGTGCG 59.191 55.000 0.78 0.00 0.00 5.34
619 620 1.917872 TGGGGTAGACAATTTGGTGC 58.082 50.000 0.78 0.00 0.00 5.01
620 621 6.597832 TTTTATGGGGTAGACAATTTGGTG 57.402 37.500 0.78 0.00 0.00 4.17
683 684 1.001815 GCACCTGCGCTTACTGAAAAA 60.002 47.619 9.73 0.00 0.00 1.94
684 685 0.591170 GCACCTGCGCTTACTGAAAA 59.409 50.000 9.73 0.00 0.00 2.29
685 686 0.533978 TGCACCTGCGCTTACTGAAA 60.534 50.000 9.73 0.00 45.83 2.69
686 687 0.950555 CTGCACCTGCGCTTACTGAA 60.951 55.000 9.73 0.00 45.83 3.02
687 688 1.374631 CTGCACCTGCGCTTACTGA 60.375 57.895 9.73 0.00 45.83 3.41
688 689 0.742281 ATCTGCACCTGCGCTTACTG 60.742 55.000 9.73 0.00 45.83 2.74
689 690 0.742281 CATCTGCACCTGCGCTTACT 60.742 55.000 9.73 0.00 45.83 2.24
690 691 0.740868 TCATCTGCACCTGCGCTTAC 60.741 55.000 9.73 0.00 45.83 2.34
691 692 0.460811 CTCATCTGCACCTGCGCTTA 60.461 55.000 9.73 0.00 45.83 3.09
692 693 1.744368 CTCATCTGCACCTGCGCTT 60.744 57.895 9.73 0.00 45.83 4.68
693 694 2.125229 CTCATCTGCACCTGCGCT 60.125 61.111 9.73 0.00 45.83 5.92
694 695 3.873883 GCTCATCTGCACCTGCGC 61.874 66.667 0.00 0.00 45.83 6.09
695 696 2.125229 AGCTCATCTGCACCTGCG 60.125 61.111 0.00 0.00 45.83 5.18
696 697 2.172372 CGAGCTCATCTGCACCTGC 61.172 63.158 15.40 0.00 42.50 4.85
697 698 1.521010 CCGAGCTCATCTGCACCTG 60.521 63.158 15.40 0.00 34.99 4.00
698 699 1.986757 ACCGAGCTCATCTGCACCT 60.987 57.895 15.40 0.00 34.99 4.00
699 700 1.812922 CACCGAGCTCATCTGCACC 60.813 63.158 15.40 0.00 34.99 5.01
700 701 2.459442 GCACCGAGCTCATCTGCAC 61.459 63.158 15.40 0.00 41.15 4.57
701 702 2.125391 GCACCGAGCTCATCTGCA 60.125 61.111 15.40 0.00 41.15 4.41
702 703 2.125391 TGCACCGAGCTCATCTGC 60.125 61.111 15.40 16.15 45.94 4.26
703 704 0.528033 CTCTGCACCGAGCTCATCTG 60.528 60.000 15.40 6.23 45.94 2.90
704 705 0.682532 TCTCTGCACCGAGCTCATCT 60.683 55.000 15.40 0.00 45.94 2.90
705 706 0.388659 ATCTCTGCACCGAGCTCATC 59.611 55.000 15.40 0.00 45.94 2.92
706 707 0.388659 GATCTCTGCACCGAGCTCAT 59.611 55.000 15.40 0.00 45.94 2.90
707 708 0.682532 AGATCTCTGCACCGAGCTCA 60.683 55.000 15.40 0.00 45.94 4.26
708 709 0.459489 AAGATCTCTGCACCGAGCTC 59.541 55.000 2.73 2.73 45.94 4.09
709 710 1.769026 TAAGATCTCTGCACCGAGCT 58.231 50.000 0.00 0.00 45.94 4.09
710 711 2.586258 TTAAGATCTCTGCACCGAGC 57.414 50.000 0.00 0.00 45.96 5.03
711 712 7.032580 CCTTATATTAAGATCTCTGCACCGAG 58.967 42.308 0.00 0.00 0.00 4.63
712 713 6.719829 TCCTTATATTAAGATCTCTGCACCGA 59.280 38.462 0.00 0.00 0.00 4.69
713 714 6.925211 TCCTTATATTAAGATCTCTGCACCG 58.075 40.000 0.00 0.00 0.00 4.94
714 715 8.535335 TCATCCTTATATTAAGATCTCTGCACC 58.465 37.037 0.00 0.00 0.00 5.01
715 716 9.585099 CTCATCCTTATATTAAGATCTCTGCAC 57.415 37.037 0.00 0.00 0.00 4.57
716 717 9.319060 ACTCATCCTTATATTAAGATCTCTGCA 57.681 33.333 0.00 0.00 0.00 4.41
717 718 9.585099 CACTCATCCTTATATTAAGATCTCTGC 57.415 37.037 0.00 0.00 0.00 4.26
728 729 8.754080 GCCTACTCATACACTCATCCTTATATT 58.246 37.037 0.00 0.00 0.00 1.28
729 730 8.119246 AGCCTACTCATACACTCATCCTTATAT 58.881 37.037 0.00 0.00 0.00 0.86
767 768 3.052566 TGTGGCCATTGGTTGGGATATAA 60.053 43.478 9.72 0.00 46.55 0.98
771 1519 0.904394 GTGTGGCCATTGGTTGGGAT 60.904 55.000 9.72 0.00 46.55 3.85
772 1520 1.532794 GTGTGGCCATTGGTTGGGA 60.533 57.895 9.72 0.00 46.55 4.37
780 1528 0.383949 GTGTTTGTCGTGTGGCCATT 59.616 50.000 9.72 0.00 0.00 3.16
791 1539 2.039327 TATTTTGCGCCGTGTTTGTC 57.961 45.000 4.18 0.00 0.00 3.18
834 1587 5.061179 AGTCGTGGTTTACTGCTAACATTT 58.939 37.500 0.00 0.00 0.00 2.32
835 1588 4.638304 AGTCGTGGTTTACTGCTAACATT 58.362 39.130 0.00 0.00 0.00 2.71
838 1591 3.673809 CAGAGTCGTGGTTTACTGCTAAC 59.326 47.826 0.00 0.00 0.00 2.34
839 1592 3.859627 GCAGAGTCGTGGTTTACTGCTAA 60.860 47.826 0.00 0.00 44.51 3.09
840 1593 2.352421 GCAGAGTCGTGGTTTACTGCTA 60.352 50.000 0.00 0.00 44.51 3.49
842 1595 0.790814 GCAGAGTCGTGGTTTACTGC 59.209 55.000 0.00 0.00 42.44 4.40
843 1596 2.061773 CAGCAGAGTCGTGGTTTACTG 58.938 52.381 0.00 0.00 0.00 2.74
877 1653 3.422303 ACGCGAACGCATGCACAT 61.422 55.556 19.57 2.06 45.53 3.21
905 1681 2.035176 CACACACGAACGTAACACAGAC 60.035 50.000 0.00 0.00 0.00 3.51
919 1695 4.000557 GAGGCGCACACACACACG 62.001 66.667 10.83 0.00 0.00 4.49
987 1765 2.865598 CGGCATGCTCGGATCTCCT 61.866 63.158 18.92 0.00 0.00 3.69
1007 1785 3.857854 CAGGACGCACTCGCATGC 61.858 66.667 7.91 7.91 42.48 4.06
1008 1786 2.433145 ACAGGACGCACTCGCATG 60.433 61.111 0.00 0.00 39.84 4.06
1009 1787 2.433145 CACAGGACGCACTCGCAT 60.433 61.111 0.00 0.00 39.84 4.73
1065 1846 2.514592 CGCCGCACCATCTCCAAT 60.515 61.111 0.00 0.00 0.00 3.16
1091 1875 1.871039 CACACAAGGTTTTCCGACGAT 59.129 47.619 0.00 0.00 46.35 3.73
1095 1879 3.199677 CACTACACACAAGGTTTTCCGA 58.800 45.455 0.00 0.00 46.35 4.55
1148 1932 3.411446 CTCTCTCTCTCACACACACTCT 58.589 50.000 0.00 0.00 0.00 3.24
1156 1940 3.045277 GCGCGCTCTCTCTCTCACA 62.045 63.158 26.67 0.00 0.00 3.58
1157 1941 2.277884 GCGCGCTCTCTCTCTCAC 60.278 66.667 26.67 0.00 0.00 3.51
1158 1942 3.870422 CGCGCGCTCTCTCTCTCA 61.870 66.667 30.48 0.00 0.00 3.27
1374 2216 3.547249 GAGGTGTTCGACGGCGTGA 62.547 63.158 21.19 12.93 38.98 4.35
1829 4408 4.823419 CGGGCGTCGGCACCATTA 62.823 66.667 21.23 0.00 40.39 1.90
2319 4963 2.362242 AGCGTACTTGAAGCTGGGA 58.638 52.632 0.00 0.00 41.78 4.37
2451 5107 2.429930 CCGTCCAGCTTGTTCCCA 59.570 61.111 0.00 0.00 0.00 4.37
2604 5277 0.030369 CTACCACCGCGGATCAGTAC 59.970 60.000 35.90 0.00 38.63 2.73
2605 5278 1.105167 CCTACCACCGCGGATCAGTA 61.105 60.000 35.90 23.43 38.63 2.74
2606 5279 2.423898 CCTACCACCGCGGATCAGT 61.424 63.158 35.90 23.58 38.63 3.41
2607 5280 2.417516 CCTACCACCGCGGATCAG 59.582 66.667 35.90 21.26 38.63 2.90
2608 5281 2.363276 ACCTACCACCGCGGATCA 60.363 61.111 35.90 12.74 38.63 2.92
2609 5282 2.106332 CACCTACCACCGCGGATC 59.894 66.667 35.90 0.00 38.63 3.36
2651 5324 3.831637 AGCCCCACTGCCCAAACA 61.832 61.111 0.00 0.00 0.00 2.83
2666 5339 3.534056 GATGCATGCCCCCACAGC 61.534 66.667 16.68 0.00 0.00 4.40
2667 5340 2.043752 TGATGCATGCCCCCACAG 60.044 61.111 16.68 0.00 0.00 3.66
2669 5342 3.534056 GCTGATGCATGCCCCCAC 61.534 66.667 16.68 2.61 39.41 4.61
2670 5343 4.845447 GGCTGATGCATGCCCCCA 62.845 66.667 16.68 9.29 43.11 4.96
2675 5348 1.029681 TCTGAATGGCTGATGCATGC 58.970 50.000 11.82 11.82 41.91 4.06
2693 5366 6.458232 ACAGTAGACTTCCATCACTGTATC 57.542 41.667 4.92 0.00 45.90 2.24
2762 5435 5.348164 ACTCAACGTTTCCCAATTTTGAAG 58.652 37.500 0.00 0.00 0.00 3.02
2772 5445 1.293963 GCCGGTACTCAACGTTTCCC 61.294 60.000 1.90 0.00 0.00 3.97
2773 5446 1.620413 CGCCGGTACTCAACGTTTCC 61.620 60.000 1.90 0.00 0.00 3.13
2774 5447 1.620413 CCGCCGGTACTCAACGTTTC 61.620 60.000 1.90 0.00 0.00 2.78
2775 5448 1.665599 CCGCCGGTACTCAACGTTT 60.666 57.895 1.90 0.00 0.00 3.60
2776 5449 2.048877 CCGCCGGTACTCAACGTT 60.049 61.111 1.90 0.00 0.00 3.99
2777 5450 3.273080 GACCGCCGGTACTCAACGT 62.273 63.158 9.73 0.00 35.25 3.99
2778 5451 2.505557 GACCGCCGGTACTCAACG 60.506 66.667 9.73 0.00 35.25 4.10
2779 5452 2.505557 CGACCGCCGGTACTCAAC 60.506 66.667 9.73 0.00 35.25 3.18
2810 5483 1.263484 GAATACTCGATCGAGCGGTCA 59.737 52.381 38.12 21.50 45.54 4.02
2824 5497 4.040952 GTGATGGATGGCTACAGGAATACT 59.959 45.833 0.00 0.00 0.00 2.12
2847 5520 2.032860 ATCGGGGAGATGTTGAGCGG 62.033 60.000 0.00 0.00 38.36 5.52
2854 5527 0.976073 AACGTGGATCGGGGAGATGT 60.976 55.000 0.00 0.00 44.69 3.06
2855 5528 0.178068 AAACGTGGATCGGGGAGATG 59.822 55.000 0.00 0.00 44.69 2.90
2918 5591 1.743252 GAACGAGCAGCCTCTTGGG 60.743 63.158 0.00 0.00 35.90 4.12
2987 5661 1.483827 CACCTCATAGCCTCAGCAAGA 59.516 52.381 0.00 0.00 43.56 3.02
3000 5674 2.176798 TCTTTTGACCAACCCACCTCAT 59.823 45.455 0.00 0.00 0.00 2.90
3014 5688 0.315886 TGCGGTCGTAGCTCTTTTGA 59.684 50.000 0.00 0.00 35.28 2.69
3015 5689 0.716108 CTGCGGTCGTAGCTCTTTTG 59.284 55.000 0.00 0.00 35.28 2.44
3016 5690 3.123674 CTGCGGTCGTAGCTCTTTT 57.876 52.632 0.00 0.00 35.28 2.27
3052 5726 2.546368 GTCACAACATAGCCGACAAACA 59.454 45.455 0.00 0.00 0.00 2.83
3162 5836 2.631428 CACGTTGGTTCCAGCACG 59.369 61.111 12.58 12.58 0.00 5.34
3187 5862 1.504359 AAAATTGTCGCTCGTTCCGA 58.496 45.000 0.00 0.00 0.00 4.55
3330 6008 4.675029 CGCTGTCGTCCCGGGTTT 62.675 66.667 22.86 0.00 0.00 3.27
3498 6184 1.120437 GCGTCGGTTGAAGCTTTTTG 58.880 50.000 0.00 0.00 44.83 2.44
3571 6260 2.672651 CCATCGCAGCACCACCAA 60.673 61.111 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.