Multiple sequence alignment - TraesCS2A01G024400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G024400 chr2A 100.000 3664 0 0 1 3664 11837164 11833501 0.000000e+00 6767.0
1 TraesCS2A01G024400 chr2A 79.202 1654 275 38 1001 2619 11871162 11869543 0.000000e+00 1085.0
2 TraesCS2A01G024400 chr2D 89.437 2291 218 15 998 3276 11268119 11270397 0.000000e+00 2868.0
3 TraesCS2A01G024400 chr2D 78.327 1112 198 23 1540 2619 11219446 11220546 0.000000e+00 678.0
4 TraesCS2A01G024400 chr2D 79.189 913 167 18 1925 2825 11230433 11231334 2.420000e-171 612.0
5 TraesCS2A01G024400 chr2D 78.857 700 136 12 1927 2620 26352078 26352771 2.580000e-126 462.0
6 TraesCS2A01G024400 chr2D 85.502 269 21 11 728 995 11267834 11268085 7.800000e-67 265.0
7 TraesCS2A01G024400 chr2D 87.374 198 19 2 1286 1481 11224099 11224292 4.760000e-54 222.0
8 TraesCS2A01G024400 chr2D 86.842 152 14 2 3500 3651 11270403 11270548 8.140000e-37 165.0
9 TraesCS2A01G024400 chr2D 75.241 311 72 4 1529 1835 11230082 11230391 3.810000e-30 143.0
10 TraesCS2A01G024400 chr2D 90.244 82 7 1 1555 1636 11228628 11228708 5.000000e-19 106.0
11 TraesCS2A01G024400 chr2D 80.583 103 7 5 3185 3275 11231474 11231575 2.360000e-07 67.6
12 TraesCS2A01G024400 chrUn 76.870 869 169 23 1625 2474 378051158 378050303 2.580000e-126 462.0
13 TraesCS2A01G024400 chrUn 86.014 286 38 2 1197 1481 376171340 376171056 4.600000e-79 305.0
14 TraesCS2A01G024400 chrUn 86.014 286 38 2 1197 1481 378051908 378051624 4.600000e-79 305.0
15 TraesCS2A01G024400 chr4B 88.263 213 21 2 3289 3501 68957930 68958138 6.070000e-63 252.0
16 TraesCS2A01G024400 chr1A 86.916 214 28 0 3289 3502 592836303 592836090 1.310000e-59 241.0
17 TraesCS2A01G024400 chr1A 84.112 214 33 1 3289 3501 391253971 391254184 4.800000e-49 206.0
18 TraesCS2A01G024400 chr6B 86.854 213 28 0 3289 3501 694519223 694519435 4.730000e-59 239.0
19 TraesCS2A01G024400 chr6D 85.915 213 30 0 3289 3501 456668401 456668613 1.020000e-55 228.0
20 TraesCS2A01G024400 chr1D 85.185 216 32 0 3289 3504 489720906 489720691 4.760000e-54 222.0
21 TraesCS2A01G024400 chr1D 84.507 213 33 0 3289 3501 311359989 311360201 1.030000e-50 211.0
22 TraesCS2A01G024400 chr4D 84.507 213 33 0 3289 3501 16357037 16356825 1.030000e-50 211.0
23 TraesCS2A01G024400 chr5D 85.075 201 27 2 3298 3498 185207676 185207479 6.200000e-48 202.0
24 TraesCS2A01G024400 chr3D 79.038 291 56 5 3 291 498213438 498213151 1.040000e-45 195.0
25 TraesCS2A01G024400 chr2B 79.327 208 41 2 1529 1735 17187789 17187583 1.060000e-30 145.0
26 TraesCS2A01G024400 chr2B 80.645 186 24 5 2653 2834 17237672 17237495 2.300000e-27 134.0
27 TraesCS2A01G024400 chr2B 85.294 102 11 1 3561 3662 17186658 17186561 6.470000e-18 102.0
28 TraesCS2A01G024400 chr2B 83.838 99 7 3 3185 3275 17029541 17029638 6.520000e-13 86.1
29 TraesCS2A01G024400 chr7B 100.000 28 0 0 3610 3637 649453877 649453904 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G024400 chr2A 11833501 11837164 3663 True 6767.000000 6767 100.000000 1 3664 1 chr2A.!!$R1 3663
1 TraesCS2A01G024400 chr2A 11869543 11871162 1619 True 1085.000000 1085 79.202000 1001 2619 1 chr2A.!!$R2 1618
2 TraesCS2A01G024400 chr2D 11267834 11270548 2714 False 1099.333333 2868 87.260333 728 3651 3 chr2D.!!$F4 2923
3 TraesCS2A01G024400 chr2D 26352078 26352771 693 False 462.000000 462 78.857000 1927 2620 1 chr2D.!!$F1 693
4 TraesCS2A01G024400 chr2D 11219446 11224292 4846 False 450.000000 678 82.850500 1286 2619 2 chr2D.!!$F2 1333
5 TraesCS2A01G024400 chr2D 11228628 11231575 2947 False 232.150000 612 81.314250 1529 3275 4 chr2D.!!$F3 1746
6 TraesCS2A01G024400 chrUn 378050303 378051908 1605 True 383.500000 462 81.442000 1197 2474 2 chrUn.!!$R2 1277

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
539 540 0.028902 GGTTCAACGGCTTGACACAC 59.971 55.0 0.0 0.0 36.06 3.82 F
980 986 0.032540 CAACCAAGGAGCAGCAAACC 59.967 55.0 0.0 0.0 0.00 3.27 F
1934 3176 0.035458 CGGAAGTGCTGGAGAGGTTT 59.965 55.0 0.0 0.0 0.00 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1446 1501 0.179045 ATACCTGCCGATGTGGAAGC 60.179 55.0 0.00 0.0 43.02 3.86 R
2312 3557 0.326264 GAACCTCCAGCATCACCACT 59.674 55.0 0.00 0.0 0.00 4.00 R
3232 4549 0.032017 ATTGGACGGAGCCTCCTACT 60.032 55.0 9.52 0.0 33.30 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.695851 TCTGTTTTCAGCTTGGATTCTTC 57.304 39.130 0.00 0.00 46.59 2.87
23 24 4.520492 TCTGTTTTCAGCTTGGATTCTTCC 59.480 41.667 0.00 0.00 46.59 3.46
25 26 3.417069 TTTCAGCTTGGATTCTTCCGA 57.583 42.857 0.00 0.00 45.89 4.55
26 27 3.634397 TTCAGCTTGGATTCTTCCGAT 57.366 42.857 0.00 0.00 45.89 4.18
27 28 3.185246 TCAGCTTGGATTCTTCCGATC 57.815 47.619 0.00 0.00 45.89 3.69
32 33 4.038642 AGCTTGGATTCTTCCGATCTACTC 59.961 45.833 0.00 0.00 45.89 2.59
33 34 4.038642 GCTTGGATTCTTCCGATCTACTCT 59.961 45.833 0.00 0.00 45.89 3.24
34 35 5.241949 GCTTGGATTCTTCCGATCTACTCTA 59.758 44.000 0.00 0.00 45.89 2.43
35 36 6.636562 TTGGATTCTTCCGATCTACTCTAC 57.363 41.667 0.00 0.00 45.89 2.59
36 37 5.942961 TGGATTCTTCCGATCTACTCTACT 58.057 41.667 0.00 0.00 45.89 2.57
38 39 7.691213 TGGATTCTTCCGATCTACTCTACTAT 58.309 38.462 0.00 0.00 45.89 2.12
39 40 8.164733 TGGATTCTTCCGATCTACTCTACTATT 58.835 37.037 0.00 0.00 45.89 1.73
40 41 8.671028 GGATTCTTCCGATCTACTCTACTATTC 58.329 40.741 0.00 0.00 30.72 1.75
42 43 9.747898 ATTCTTCCGATCTACTCTACTATTCAT 57.252 33.333 0.00 0.00 0.00 2.57
44 45 7.546316 TCTTCCGATCTACTCTACTATTCATCG 59.454 40.741 0.00 0.00 33.34 3.84
45 46 6.352682 CCGATCTACTCTACTATTCATCGG 57.647 45.833 2.86 2.86 43.93 4.18
46 47 5.220700 CCGATCTACTCTACTATTCATCGGC 60.221 48.000 4.24 0.00 43.54 5.54
49 50 1.269998 ACTCTACTATTCATCGGCGGC 59.730 52.381 7.21 0.00 0.00 6.53
50 51 0.240145 TCTACTATTCATCGGCGGCG 59.760 55.000 27.15 27.15 0.00 6.46
51 52 0.732880 CTACTATTCATCGGCGGCGG 60.733 60.000 31.73 16.54 0.00 6.13
53 54 1.594293 CTATTCATCGGCGGCGGTT 60.594 57.895 31.73 16.58 0.00 4.44
54 55 1.153329 TATTCATCGGCGGCGGTTT 60.153 52.632 31.73 13.84 0.00 3.27
56 57 2.869503 ATTCATCGGCGGCGGTTTCT 62.870 55.000 31.73 11.05 0.00 2.52
57 58 3.864686 CATCGGCGGCGGTTTCTG 61.865 66.667 31.73 16.32 0.00 3.02
59 60 3.894547 ATCGGCGGCGGTTTCTGTT 62.895 57.895 31.73 3.55 0.00 3.16
60 61 4.084888 CGGCGGCGGTTTCTGTTC 62.085 66.667 25.36 0.00 0.00 3.18
62 63 2.258726 GGCGGCGGTTTCTGTTCTT 61.259 57.895 9.78 0.00 0.00 2.52
66 67 1.594331 GGCGGTTTCTGTTCTTGAGT 58.406 50.000 0.00 0.00 0.00 3.41
67 68 1.264288 GGCGGTTTCTGTTCTTGAGTG 59.736 52.381 0.00 0.00 0.00 3.51
68 69 1.940613 GCGGTTTCTGTTCTTGAGTGT 59.059 47.619 0.00 0.00 0.00 3.55
69 70 2.354821 GCGGTTTCTGTTCTTGAGTGTT 59.645 45.455 0.00 0.00 0.00 3.32
70 71 3.788797 GCGGTTTCTGTTCTTGAGTGTTG 60.789 47.826 0.00 0.00 0.00 3.33
71 72 3.621268 CGGTTTCTGTTCTTGAGTGTTGA 59.379 43.478 0.00 0.00 0.00 3.18
72 73 4.273480 CGGTTTCTGTTCTTGAGTGTTGAT 59.727 41.667 0.00 0.00 0.00 2.57
74 75 6.202226 GGTTTCTGTTCTTGAGTGTTGATTC 58.798 40.000 0.00 0.00 0.00 2.52
75 76 6.183360 GGTTTCTGTTCTTGAGTGTTGATTCA 60.183 38.462 0.00 0.00 0.00 2.57
76 77 7.250569 GTTTCTGTTCTTGAGTGTTGATTCAA 58.749 34.615 0.00 0.00 32.75 2.69
77 78 7.572523 TTCTGTTCTTGAGTGTTGATTCAAT 57.427 32.000 1.78 0.00 33.25 2.57
78 79 6.962686 TCTGTTCTTGAGTGTTGATTCAATG 58.037 36.000 1.78 0.00 33.25 2.82
79 80 6.016860 TCTGTTCTTGAGTGTTGATTCAATGG 60.017 38.462 1.78 0.00 33.25 3.16
80 81 5.009911 TGTTCTTGAGTGTTGATTCAATGGG 59.990 40.000 1.78 0.00 33.25 4.00
81 82 4.081406 TCTTGAGTGTTGATTCAATGGGG 58.919 43.478 1.78 0.00 33.25 4.96
82 83 2.170166 TGAGTGTTGATTCAATGGGGC 58.830 47.619 1.78 0.00 0.00 5.80
84 85 2.762327 GAGTGTTGATTCAATGGGGCAT 59.238 45.455 1.78 0.00 0.00 4.40
85 86 3.175594 AGTGTTGATTCAATGGGGCATT 58.824 40.909 1.78 0.00 34.04 3.56
86 87 4.352009 AGTGTTGATTCAATGGGGCATTA 58.648 39.130 1.78 0.00 32.35 1.90
87 88 4.776837 AGTGTTGATTCAATGGGGCATTAA 59.223 37.500 1.78 0.00 32.35 1.40
88 89 4.869861 GTGTTGATTCAATGGGGCATTAAC 59.130 41.667 1.78 0.00 32.35 2.01
89 90 4.529769 TGTTGATTCAATGGGGCATTAACA 59.470 37.500 1.78 0.00 32.35 2.41
90 91 4.734398 TGATTCAATGGGGCATTAACAC 57.266 40.909 0.00 0.00 32.35 3.32
94 95 1.091537 AATGGGGCATTAACACGACG 58.908 50.000 0.00 0.00 31.77 5.12
95 96 0.250793 ATGGGGCATTAACACGACGA 59.749 50.000 0.00 0.00 0.00 4.20
96 97 0.671163 TGGGGCATTAACACGACGAC 60.671 55.000 0.00 0.00 0.00 4.34
97 98 0.390735 GGGGCATTAACACGACGACT 60.391 55.000 0.00 0.00 0.00 4.18
98 99 1.435577 GGGCATTAACACGACGACTT 58.564 50.000 0.00 0.00 0.00 3.01
99 100 1.392510 GGGCATTAACACGACGACTTC 59.607 52.381 0.00 0.00 0.00 3.01
100 101 1.392510 GGCATTAACACGACGACTTCC 59.607 52.381 0.00 0.00 0.00 3.46
101 102 2.334838 GCATTAACACGACGACTTCCT 58.665 47.619 0.00 0.00 0.00 3.36
102 103 3.504863 GCATTAACACGACGACTTCCTA 58.495 45.455 0.00 0.00 0.00 2.94
103 104 3.922240 GCATTAACACGACGACTTCCTAA 59.078 43.478 0.00 0.00 0.00 2.69
105 106 4.836125 TTAACACGACGACTTCCTAACT 57.164 40.909 0.00 0.00 0.00 2.24
106 107 5.940192 TTAACACGACGACTTCCTAACTA 57.060 39.130 0.00 0.00 0.00 2.24
107 108 6.500684 TTAACACGACGACTTCCTAACTAT 57.499 37.500 0.00 0.00 0.00 2.12
108 109 5.382618 AACACGACGACTTCCTAACTATT 57.617 39.130 0.00 0.00 0.00 1.73
109 110 5.382618 ACACGACGACTTCCTAACTATTT 57.617 39.130 0.00 0.00 0.00 1.40
110 111 6.500684 ACACGACGACTTCCTAACTATTTA 57.499 37.500 0.00 0.00 0.00 1.40
112 113 6.150140 ACACGACGACTTCCTAACTATTTACT 59.850 38.462 0.00 0.00 0.00 2.24
113 114 7.334421 ACACGACGACTTCCTAACTATTTACTA 59.666 37.037 0.00 0.00 0.00 1.82
115 116 7.334421 ACGACGACTTCCTAACTATTTACTACA 59.666 37.037 0.00 0.00 0.00 2.74
117 118 9.283420 GACGACTTCCTAACTATTTACTACAAC 57.717 37.037 0.00 0.00 0.00 3.32
118 119 8.796475 ACGACTTCCTAACTATTTACTACAACA 58.204 33.333 0.00 0.00 0.00 3.33
119 120 9.630098 CGACTTCCTAACTATTTACTACAACAA 57.370 33.333 0.00 0.00 0.00 2.83
128 129 9.483916 AACTATTTACTACAACAAATTTTGCCC 57.516 29.630 9.04 0.00 0.00 5.36
129 130 7.810759 ACTATTTACTACAACAAATTTTGCCCG 59.189 33.333 9.04 0.94 0.00 6.13
130 131 5.769484 TTACTACAACAAATTTTGCCCGA 57.231 34.783 9.04 0.00 0.00 5.14
131 132 3.972403 ACTACAACAAATTTTGCCCGAC 58.028 40.909 9.04 0.00 0.00 4.79
132 133 3.634910 ACTACAACAAATTTTGCCCGACT 59.365 39.130 9.04 0.00 0.00 4.18
134 135 2.223947 ACAACAAATTTTGCCCGACTCC 60.224 45.455 9.04 0.00 0.00 3.85
135 136 0.596082 ACAAATTTTGCCCGACTCCG 59.404 50.000 9.04 0.00 0.00 4.63
152 153 4.176752 GGTGGGAGGGGCGATGAC 62.177 72.222 0.00 0.00 0.00 3.06
153 154 3.399181 GTGGGAGGGGCGATGACA 61.399 66.667 0.00 0.00 0.00 3.58
154 155 3.083349 TGGGAGGGGCGATGACAG 61.083 66.667 0.00 0.00 0.00 3.51
155 156 4.554036 GGGAGGGGCGATGACAGC 62.554 72.222 0.00 0.00 0.00 4.40
156 157 3.785859 GGAGGGGCGATGACAGCA 61.786 66.667 0.00 0.00 36.08 4.41
157 158 2.202987 GAGGGGCGATGACAGCAG 60.203 66.667 0.00 0.00 36.08 4.24
158 159 4.479993 AGGGGCGATGACAGCAGC 62.480 66.667 0.00 0.00 36.08 5.25
164 165 2.186384 GATGACAGCAGCGCTCCT 59.814 61.111 7.13 0.00 36.40 3.69
166 167 1.427592 GATGACAGCAGCGCTCCTTC 61.428 60.000 7.13 5.21 36.40 3.46
167 168 3.184683 GACAGCAGCGCTCCTTCG 61.185 66.667 7.13 0.00 36.40 3.79
168 169 4.749310 ACAGCAGCGCTCCTTCGG 62.749 66.667 7.13 0.00 36.40 4.30
172 173 4.441695 CAGCGCTCCTTCGGCTCA 62.442 66.667 7.13 0.00 34.13 4.26
173 174 3.465403 AGCGCTCCTTCGGCTCAT 61.465 61.111 2.64 0.00 29.31 2.90
174 175 2.512515 GCGCTCCTTCGGCTCATT 60.513 61.111 0.00 0.00 0.00 2.57
175 176 2.109126 GCGCTCCTTCGGCTCATTT 61.109 57.895 0.00 0.00 0.00 2.32
176 177 2.009888 CGCTCCTTCGGCTCATTTC 58.990 57.895 0.00 0.00 0.00 2.17
177 178 0.740868 CGCTCCTTCGGCTCATTTCA 60.741 55.000 0.00 0.00 0.00 2.69
178 179 1.453155 GCTCCTTCGGCTCATTTCAA 58.547 50.000 0.00 0.00 0.00 2.69
179 180 2.019984 GCTCCTTCGGCTCATTTCAAT 58.980 47.619 0.00 0.00 0.00 2.57
180 181 2.223433 GCTCCTTCGGCTCATTTCAATG 60.223 50.000 0.00 0.00 37.75 2.82
181 182 3.012518 CTCCTTCGGCTCATTTCAATGT 58.987 45.455 0.00 0.00 37.65 2.71
182 183 3.420893 TCCTTCGGCTCATTTCAATGTT 58.579 40.909 0.00 0.00 37.65 2.71
183 184 3.826157 TCCTTCGGCTCATTTCAATGTTT 59.174 39.130 0.00 0.00 37.65 2.83
184 185 3.922240 CCTTCGGCTCATTTCAATGTTTG 59.078 43.478 0.00 0.00 37.65 2.93
185 186 4.549458 CTTCGGCTCATTTCAATGTTTGT 58.451 39.130 0.00 0.00 37.65 2.83
186 187 5.335583 CCTTCGGCTCATTTCAATGTTTGTA 60.336 40.000 0.00 0.00 37.65 2.41
187 188 5.041951 TCGGCTCATTTCAATGTTTGTAC 57.958 39.130 0.00 0.00 37.65 2.90
188 189 4.759693 TCGGCTCATTTCAATGTTTGTACT 59.240 37.500 0.00 0.00 37.65 2.73
189 190 5.088739 CGGCTCATTTCAATGTTTGTACTC 58.911 41.667 0.00 0.00 37.65 2.59
191 192 5.334879 GGCTCATTTCAATGTTTGTACTCGT 60.335 40.000 0.00 0.00 37.65 4.18
192 193 5.790495 GCTCATTTCAATGTTTGTACTCGTC 59.210 40.000 0.00 0.00 37.65 4.20
193 194 5.911421 TCATTTCAATGTTTGTACTCGTCG 58.089 37.500 0.00 0.00 37.65 5.12
194 195 3.781341 TTCAATGTTTGTACTCGTCGC 57.219 42.857 0.00 0.00 0.00 5.19
195 196 3.021269 TCAATGTTTGTACTCGTCGCT 57.979 42.857 0.00 0.00 0.00 4.93
196 197 4.163458 TCAATGTTTGTACTCGTCGCTA 57.837 40.909 0.00 0.00 0.00 4.26
197 198 4.163552 TCAATGTTTGTACTCGTCGCTAG 58.836 43.478 0.00 0.00 0.00 3.42
200 201 3.073678 TGTTTGTACTCGTCGCTAGGTA 58.926 45.455 0.00 0.00 0.00 3.08
201 202 3.125829 TGTTTGTACTCGTCGCTAGGTAG 59.874 47.826 0.00 0.00 0.00 3.18
202 203 2.680312 TGTACTCGTCGCTAGGTAGT 57.320 50.000 0.00 0.00 0.00 2.73
203 204 2.544685 TGTACTCGTCGCTAGGTAGTC 58.455 52.381 0.00 0.00 0.00 2.59
204 205 2.167281 TGTACTCGTCGCTAGGTAGTCT 59.833 50.000 0.00 0.00 0.00 3.24
205 206 3.381590 TGTACTCGTCGCTAGGTAGTCTA 59.618 47.826 0.00 0.00 0.00 2.59
206 207 2.820330 ACTCGTCGCTAGGTAGTCTAC 58.180 52.381 0.95 0.95 0.00 2.59
222 223 8.522542 GGTAGTCTACCGATCTGGATATATTT 57.477 38.462 13.35 0.00 42.00 1.40
223 224 8.968969 GGTAGTCTACCGATCTGGATATATTTT 58.031 37.037 13.35 0.00 42.00 1.82
245 246 6.438259 TTTTGTTAATTCTGGTGTTCGTCA 57.562 33.333 0.00 0.00 0.00 4.35
247 248 7.731882 TTTGTTAATTCTGGTGTTCGTCATA 57.268 32.000 0.00 0.00 0.00 2.15
250 251 2.357327 TTCTGGTGTTCGTCATACCG 57.643 50.000 0.00 0.00 37.29 4.02
251 252 1.250328 TCTGGTGTTCGTCATACCGT 58.750 50.000 0.00 0.00 37.29 4.83
252 253 1.200716 TCTGGTGTTCGTCATACCGTC 59.799 52.381 0.00 0.00 37.29 4.79
253 254 0.960286 TGGTGTTCGTCATACCGTCA 59.040 50.000 0.00 0.00 37.29 4.35
254 255 1.546923 TGGTGTTCGTCATACCGTCAT 59.453 47.619 0.00 0.00 37.29 3.06
255 256 1.924524 GGTGTTCGTCATACCGTCATG 59.075 52.381 0.00 0.00 0.00 3.07
256 257 2.416296 GGTGTTCGTCATACCGTCATGA 60.416 50.000 0.00 0.00 32.50 3.07
257 258 3.444916 GTGTTCGTCATACCGTCATGAT 58.555 45.455 0.00 0.00 37.28 2.45
258 259 3.863424 GTGTTCGTCATACCGTCATGATT 59.137 43.478 0.00 0.00 37.28 2.57
259 260 4.328983 GTGTTCGTCATACCGTCATGATTT 59.671 41.667 0.00 0.00 37.28 2.17
260 261 5.517411 GTGTTCGTCATACCGTCATGATTTA 59.483 40.000 0.00 0.00 37.28 1.40
262 263 6.254804 TGTTCGTCATACCGTCATGATTTAAG 59.745 38.462 0.00 0.00 37.28 1.85
263 264 6.139048 TCGTCATACCGTCATGATTTAAGA 57.861 37.500 0.00 0.00 37.28 2.10
264 265 6.745116 TCGTCATACCGTCATGATTTAAGAT 58.255 36.000 0.00 0.00 37.28 2.40
265 266 6.640907 TCGTCATACCGTCATGATTTAAGATG 59.359 38.462 0.00 0.00 37.28 2.90
266 267 6.640907 CGTCATACCGTCATGATTTAAGATGA 59.359 38.462 0.00 1.60 37.28 2.92
268 269 8.276325 GTCATACCGTCATGATTTAAGATGAAC 58.724 37.037 0.00 0.00 37.28 3.18
269 270 7.984617 TCATACCGTCATGATTTAAGATGAACA 59.015 33.333 0.00 0.00 30.45 3.18
270 271 6.668541 ACCGTCATGATTTAAGATGAACAG 57.331 37.500 0.00 0.00 30.45 3.16
271 272 6.406370 ACCGTCATGATTTAAGATGAACAGA 58.594 36.000 0.00 0.00 30.45 3.41
272 273 7.050377 ACCGTCATGATTTAAGATGAACAGAT 58.950 34.615 0.00 0.00 30.45 2.90
275 276 7.168135 CGTCATGATTTAAGATGAACAGATCGA 59.832 37.037 0.00 0.00 30.45 3.59
277 278 9.551734 TCATGATTTAAGATGAACAGATCGAAT 57.448 29.630 0.00 0.00 0.00 3.34
278 279 9.595357 CATGATTTAAGATGAACAGATCGAATG 57.405 33.333 0.00 0.00 0.00 2.67
279 280 8.722480 TGATTTAAGATGAACAGATCGAATGT 57.278 30.769 1.05 1.05 0.00 2.71
280 281 9.166173 TGATTTAAGATGAACAGATCGAATGTT 57.834 29.630 16.60 16.60 43.38 2.71
281 282 9.994432 GATTTAAGATGAACAGATCGAATGTTT 57.006 29.630 17.40 5.97 40.86 2.83
282 283 9.994432 ATTTAAGATGAACAGATCGAATGTTTC 57.006 29.630 17.40 12.93 40.86 2.78
283 284 6.428385 AAGATGAACAGATCGAATGTTTCC 57.572 37.500 17.40 8.87 40.86 3.13
285 286 5.939883 AGATGAACAGATCGAATGTTTCCAA 59.060 36.000 17.40 7.50 40.86 3.53
286 287 6.430925 AGATGAACAGATCGAATGTTTCCAAA 59.569 34.615 17.40 5.65 40.86 3.28
287 288 6.384258 TGAACAGATCGAATGTTTCCAAAA 57.616 33.333 17.40 2.00 40.86 2.44
288 289 6.800543 TGAACAGATCGAATGTTTCCAAAAA 58.199 32.000 17.40 0.69 40.86 1.94
311 312 8.519799 AAAAAGGTACTGAAGACTTGAAATGA 57.480 30.769 0.00 0.00 40.86 2.57
312 313 8.519799 AAAAGGTACTGAAGACTTGAAATGAA 57.480 30.769 0.00 0.00 40.86 2.57
313 314 7.736447 AAGGTACTGAAGACTTGAAATGAAG 57.264 36.000 0.00 0.00 40.86 3.02
314 315 7.067496 AGGTACTGAAGACTTGAAATGAAGA 57.933 36.000 0.00 0.00 37.18 2.87
315 316 6.931840 AGGTACTGAAGACTTGAAATGAAGAC 59.068 38.462 0.00 0.00 37.18 3.01
316 317 6.147985 GGTACTGAAGACTTGAAATGAAGACC 59.852 42.308 0.00 0.00 0.00 3.85
317 318 5.066593 ACTGAAGACTTGAAATGAAGACCC 58.933 41.667 0.00 0.00 0.00 4.46
318 319 4.065088 TGAAGACTTGAAATGAAGACCCG 58.935 43.478 0.00 0.00 0.00 5.28
319 320 4.202315 TGAAGACTTGAAATGAAGACCCGA 60.202 41.667 0.00 0.00 0.00 5.14
320 321 4.351874 AGACTTGAAATGAAGACCCGAA 57.648 40.909 0.00 0.00 0.00 4.30
321 322 4.065789 AGACTTGAAATGAAGACCCGAAC 58.934 43.478 0.00 0.00 0.00 3.95
322 323 3.813166 GACTTGAAATGAAGACCCGAACA 59.187 43.478 0.00 0.00 0.00 3.18
323 324 4.204012 ACTTGAAATGAAGACCCGAACAA 58.796 39.130 0.00 0.00 0.00 2.83
325 326 4.764679 TGAAATGAAGACCCGAACAATG 57.235 40.909 0.00 0.00 0.00 2.82
326 327 4.141287 TGAAATGAAGACCCGAACAATGT 58.859 39.130 0.00 0.00 0.00 2.71
328 329 5.068460 TGAAATGAAGACCCGAACAATGTTT 59.932 36.000 0.00 0.00 0.00 2.83
329 330 3.980646 TGAAGACCCGAACAATGTTTG 57.019 42.857 6.38 6.38 0.00 2.93
331 332 0.591170 AGACCCGAACAATGTTTGCG 59.409 50.000 7.83 4.20 0.00 4.85
332 333 0.386731 GACCCGAACAATGTTTGCGG 60.387 55.000 16.38 16.38 41.53 5.69
333 334 0.820074 ACCCGAACAATGTTTGCGGA 60.820 50.000 22.56 0.00 44.43 5.54
334 335 0.525761 CCCGAACAATGTTTGCGGAT 59.474 50.000 22.56 0.00 44.43 4.18
336 337 1.468520 CCGAACAATGTTTGCGGATCT 59.531 47.619 17.89 0.00 44.43 2.75
337 338 2.675844 CCGAACAATGTTTGCGGATCTA 59.324 45.455 17.89 0.00 44.43 1.98
338 339 3.312421 CCGAACAATGTTTGCGGATCTAT 59.688 43.478 17.89 0.00 44.43 1.98
339 340 4.509970 CCGAACAATGTTTGCGGATCTATA 59.490 41.667 17.89 0.00 44.43 1.31
344 345 4.543590 ATGTTTGCGGATCTATAGAGGG 57.456 45.455 8.70 1.25 0.00 4.30
345 346 2.037251 TGTTTGCGGATCTATAGAGGGC 59.963 50.000 8.70 11.22 0.00 5.19
346 347 1.267121 TTGCGGATCTATAGAGGGCC 58.733 55.000 8.70 8.50 0.00 5.80
347 348 0.114364 TGCGGATCTATAGAGGGCCA 59.886 55.000 6.18 0.78 0.00 5.36
348 349 0.820871 GCGGATCTATAGAGGGCCAG 59.179 60.000 6.18 7.33 0.00 4.85
349 350 1.617263 GCGGATCTATAGAGGGCCAGA 60.617 57.143 6.18 0.00 0.00 3.86
350 351 2.952702 GCGGATCTATAGAGGGCCAGAT 60.953 54.545 6.18 4.38 0.00 2.90
351 352 3.370104 CGGATCTATAGAGGGCCAGATT 58.630 50.000 6.18 0.00 0.00 2.40
352 353 4.537751 CGGATCTATAGAGGGCCAGATTA 58.462 47.826 6.18 0.00 0.00 1.75
353 354 4.582656 CGGATCTATAGAGGGCCAGATTAG 59.417 50.000 6.18 1.64 0.00 1.73
354 355 4.343814 GGATCTATAGAGGGCCAGATTAGC 59.656 50.000 6.18 0.00 0.00 3.09
363 364 0.819666 GCCAGATTAGCCCCTTTCGG 60.820 60.000 0.00 0.00 0.00 4.30
364 365 0.546598 CCAGATTAGCCCCTTTCGGT 59.453 55.000 0.00 0.00 0.00 4.69
365 366 1.064685 CCAGATTAGCCCCTTTCGGTT 60.065 52.381 0.00 0.00 0.00 4.44
366 367 2.017049 CAGATTAGCCCCTTTCGGTTG 58.983 52.381 0.00 0.00 0.00 3.77
367 368 1.633945 AGATTAGCCCCTTTCGGTTGT 59.366 47.619 0.00 0.00 0.00 3.32
368 369 2.841881 AGATTAGCCCCTTTCGGTTGTA 59.158 45.455 0.00 0.00 0.00 2.41
370 371 1.648116 TAGCCCCTTTCGGTTGTACT 58.352 50.000 0.00 0.00 0.00 2.73
371 372 0.323957 AGCCCCTTTCGGTTGTACTC 59.676 55.000 0.00 0.00 0.00 2.59
375 376 1.545582 CCCTTTCGGTTGTACTCCGTA 59.454 52.381 22.14 14.38 46.86 4.02
378 379 3.129988 CCTTTCGGTTGTACTCCGTAGAT 59.870 47.826 22.14 0.00 46.86 1.98
380 381 1.402968 TCGGTTGTACTCCGTAGATGC 59.597 52.381 22.14 0.00 46.86 3.91
381 382 1.404391 CGGTTGTACTCCGTAGATGCT 59.596 52.381 17.45 0.00 42.62 3.79
383 384 2.688958 GGTTGTACTCCGTAGATGCTCT 59.311 50.000 0.00 0.00 0.00 4.09
385 386 4.337555 GGTTGTACTCCGTAGATGCTCTAA 59.662 45.833 0.00 0.00 29.58 2.10
386 387 5.505985 GGTTGTACTCCGTAGATGCTCTAAG 60.506 48.000 0.00 0.00 29.58 2.18
388 389 1.957877 ACTCCGTAGATGCTCTAAGGC 59.042 52.381 15.35 0.00 44.75 4.35
389 390 1.957177 CTCCGTAGATGCTCTAAGGCA 59.043 52.381 15.35 0.00 44.75 4.75
390 391 1.957177 TCCGTAGATGCTCTAAGGCAG 59.043 52.381 15.35 0.53 44.75 4.85
391 392 1.000283 CCGTAGATGCTCTAAGGCAGG 60.000 57.143 10.48 0.00 45.75 4.85
395 396 2.756907 AGATGCTCTAAGGCAGGAAGA 58.243 47.619 0.00 0.00 45.75 2.87
397 398 3.521126 AGATGCTCTAAGGCAGGAAGAAA 59.479 43.478 0.00 0.00 45.75 2.52
398 399 3.059352 TGCTCTAAGGCAGGAAGAAAC 57.941 47.619 0.00 0.00 37.29 2.78
400 401 3.073062 TGCTCTAAGGCAGGAAGAAACTT 59.927 43.478 0.00 0.00 37.29 2.66
401 402 4.075682 GCTCTAAGGCAGGAAGAAACTTT 58.924 43.478 0.00 0.00 0.00 2.66
402 403 4.083057 GCTCTAAGGCAGGAAGAAACTTTG 60.083 45.833 0.00 0.00 0.00 2.77
403 404 5.048846 TCTAAGGCAGGAAGAAACTTTGT 57.951 39.130 0.00 0.00 0.00 2.83
404 405 4.821805 TCTAAGGCAGGAAGAAACTTTGTG 59.178 41.667 0.00 0.00 0.00 3.33
406 407 2.091885 AGGCAGGAAGAAACTTTGTGGA 60.092 45.455 0.00 0.00 0.00 4.02
407 408 2.893489 GGCAGGAAGAAACTTTGTGGAT 59.107 45.455 0.00 0.00 0.00 3.41
408 409 3.305608 GGCAGGAAGAAACTTTGTGGATG 60.306 47.826 0.00 0.00 0.00 3.51
411 412 4.022849 CAGGAAGAAACTTTGTGGATGGAC 60.023 45.833 0.00 0.00 0.00 4.02
412 413 3.058224 GGAAGAAACTTTGTGGATGGACG 60.058 47.826 0.00 0.00 0.00 4.79
414 415 2.158667 AGAAACTTTGTGGATGGACGGT 60.159 45.455 0.00 0.00 0.00 4.83
415 416 1.604604 AACTTTGTGGATGGACGGTG 58.395 50.000 0.00 0.00 0.00 4.94
416 417 0.250727 ACTTTGTGGATGGACGGTGG 60.251 55.000 0.00 0.00 0.00 4.61
417 418 0.960364 CTTTGTGGATGGACGGTGGG 60.960 60.000 0.00 0.00 0.00 4.61
418 419 2.419011 TTTGTGGATGGACGGTGGGG 62.419 60.000 0.00 0.00 0.00 4.96
419 420 4.796495 GTGGATGGACGGTGGGGC 62.796 72.222 0.00 0.00 0.00 5.80
452 453 4.487412 GTCTCCGGTACCCGCGTG 62.487 72.222 6.25 0.00 46.86 5.34
474 475 4.421515 CAGCAGTGCCCCTGGGAG 62.422 72.222 16.20 5.50 41.81 4.30
477 478 2.846532 CAGTGCCCCTGGGAGTTT 59.153 61.111 16.20 0.00 37.54 2.66
478 479 1.303643 CAGTGCCCCTGGGAGTTTC 60.304 63.158 16.20 0.00 37.54 2.78
479 480 2.035783 GTGCCCCTGGGAGTTTCC 59.964 66.667 16.20 0.00 37.50 3.13
480 481 2.451493 TGCCCCTGGGAGTTTCCA 60.451 61.111 16.20 0.00 38.64 3.53
488 489 0.850100 TGGGAGTTTCCAGGAAGCAA 59.150 50.000 17.66 0.00 38.64 3.91
489 490 1.248486 GGGAGTTTCCAGGAAGCAAC 58.752 55.000 17.66 10.80 38.64 4.17
490 491 1.248486 GGAGTTTCCAGGAAGCAACC 58.752 55.000 17.66 15.32 36.28 3.77
491 492 1.478654 GGAGTTTCCAGGAAGCAACCA 60.479 52.381 17.66 0.00 36.28 3.67
492 493 2.519013 GAGTTTCCAGGAAGCAACCAT 58.481 47.619 17.66 0.00 0.00 3.55
493 494 2.489722 GAGTTTCCAGGAAGCAACCATC 59.510 50.000 17.66 3.03 0.00 3.51
494 495 1.200020 GTTTCCAGGAAGCAACCATCG 59.800 52.381 11.08 0.00 0.00 3.84
496 497 2.409870 CCAGGAAGCAACCATCGCC 61.410 63.158 2.26 0.00 0.00 5.54
498 499 3.140814 GGAAGCAACCATCGCCCC 61.141 66.667 0.00 0.00 0.00 5.80
499 500 3.508840 GAAGCAACCATCGCCCCG 61.509 66.667 0.00 0.00 0.00 5.73
504 505 3.370231 AACCATCGCCCCGCAAAC 61.370 61.111 0.00 0.00 0.00 2.93
507 508 4.114997 CATCGCCCCGCAAACCAC 62.115 66.667 0.00 0.00 0.00 4.16
512 513 4.939368 CCCCGCAAACCACGACCA 62.939 66.667 0.00 0.00 0.00 4.02
513 514 3.656045 CCCGCAAACCACGACCAC 61.656 66.667 0.00 0.00 0.00 4.16
514 515 2.897846 CCGCAAACCACGACCACA 60.898 61.111 0.00 0.00 0.00 4.17
515 516 2.473760 CCGCAAACCACGACCACAA 61.474 57.895 0.00 0.00 0.00 3.33
518 519 0.869880 GCAAACCACGACCACAAAGC 60.870 55.000 0.00 0.00 0.00 3.51
519 520 0.248866 CAAACCACGACCACAAAGCC 60.249 55.000 0.00 0.00 0.00 4.35
521 522 3.353836 CCACGACCACAAAGCCGG 61.354 66.667 0.00 0.00 0.00 6.13
522 523 2.590575 CACGACCACAAAGCCGGT 60.591 61.111 1.90 0.00 38.56 5.28
523 524 2.184167 CACGACCACAAAGCCGGTT 61.184 57.895 1.90 0.00 34.99 4.44
524 525 1.890510 ACGACCACAAAGCCGGTTC 60.891 57.895 1.90 0.00 34.99 3.62
525 526 1.890041 CGACCACAAAGCCGGTTCA 60.890 57.895 1.90 0.00 34.99 3.18
526 527 1.440938 CGACCACAAAGCCGGTTCAA 61.441 55.000 1.90 0.00 34.99 2.69
527 528 0.030235 GACCACAAAGCCGGTTCAAC 59.970 55.000 1.90 0.00 34.99 3.18
528 529 1.008995 CCACAAAGCCGGTTCAACG 60.009 57.895 1.90 0.00 0.00 4.10
538 539 1.433053 CGGTTCAACGGCTTGACACA 61.433 55.000 0.00 0.00 36.06 3.72
539 540 0.028902 GGTTCAACGGCTTGACACAC 59.971 55.000 0.00 0.00 36.06 3.82
541 542 0.393132 TTCAACGGCTTGACACACCA 60.393 50.000 0.00 0.00 36.06 4.17
542 543 1.092921 TCAACGGCTTGACACACCAC 61.093 55.000 0.00 0.00 31.00 4.16
543 544 2.177580 AACGGCTTGACACACCACG 61.178 57.895 0.00 0.00 0.00 4.94
544 545 3.345808 CGGCTTGACACACCACGG 61.346 66.667 0.00 0.00 0.00 4.94
546 547 4.012895 GCTTGACACACCACGGCG 62.013 66.667 4.80 4.80 0.00 6.46
548 549 4.840005 TTGACACACCACGGCGCA 62.840 61.111 10.83 0.00 0.00 6.09
562 563 3.812019 CGCACGGACGCTACCTCT 61.812 66.667 0.00 0.00 0.00 3.69
563 564 2.102553 GCACGGACGCTACCTCTC 59.897 66.667 0.00 0.00 0.00 3.20
564 565 2.799371 CACGGACGCTACCTCTCC 59.201 66.667 0.00 0.00 0.00 3.71
566 567 1.451747 ACGGACGCTACCTCTCCTC 60.452 63.158 0.00 0.00 0.00 3.71
567 568 1.451567 CGGACGCTACCTCTCCTCA 60.452 63.158 0.00 0.00 0.00 3.86
568 569 1.716826 CGGACGCTACCTCTCCTCAC 61.717 65.000 0.00 0.00 0.00 3.51
573 574 0.736053 GCTACCTCTCCTCACTGTCG 59.264 60.000 0.00 0.00 0.00 4.35
574 575 0.736053 CTACCTCTCCTCACTGTCGC 59.264 60.000 0.00 0.00 0.00 5.19
575 576 1.025113 TACCTCTCCTCACTGTCGCG 61.025 60.000 0.00 0.00 0.00 5.87
576 577 2.202544 CTCTCCTCACTGTCGCGC 60.203 66.667 0.00 0.00 0.00 6.86
577 578 4.103103 TCTCCTCACTGTCGCGCG 62.103 66.667 26.76 26.76 0.00 6.86
625 626 3.777925 CGTCAAACGGCGCCAGAG 61.778 66.667 28.98 13.29 38.08 3.35
626 627 3.423154 GTCAAACGGCGCCAGAGG 61.423 66.667 28.98 12.87 0.00 3.69
627 628 3.936203 TCAAACGGCGCCAGAGGT 61.936 61.111 28.98 13.64 0.00 3.85
628 629 3.423154 CAAACGGCGCCAGAGGTC 61.423 66.667 28.98 0.00 0.00 3.85
629 630 3.936203 AAACGGCGCCAGAGGTCA 61.936 61.111 28.98 0.00 0.00 4.02
630 631 3.883744 AAACGGCGCCAGAGGTCAG 62.884 63.158 28.98 9.93 0.00 3.51
642 643 3.406442 AGGTCAGCCTCCAATCTCA 57.594 52.632 0.00 0.00 42.67 3.27
643 644 0.908198 AGGTCAGCCTCCAATCTCAC 59.092 55.000 0.00 0.00 42.67 3.51
644 645 0.908198 GGTCAGCCTCCAATCTCACT 59.092 55.000 0.00 0.00 0.00 3.41
645 646 1.134551 GGTCAGCCTCCAATCTCACTC 60.135 57.143 0.00 0.00 0.00 3.51
646 647 1.830477 GTCAGCCTCCAATCTCACTCT 59.170 52.381 0.00 0.00 0.00 3.24
647 648 2.106566 TCAGCCTCCAATCTCACTCTC 58.893 52.381 0.00 0.00 0.00 3.20
648 649 2.109774 CAGCCTCCAATCTCACTCTCT 58.890 52.381 0.00 0.00 0.00 3.10
649 650 2.101249 CAGCCTCCAATCTCACTCTCTC 59.899 54.545 0.00 0.00 0.00 3.20
650 651 1.066908 GCCTCCAATCTCACTCTCTCG 59.933 57.143 0.00 0.00 0.00 4.04
651 652 1.066908 CCTCCAATCTCACTCTCTCGC 59.933 57.143 0.00 0.00 0.00 5.03
652 653 1.066908 CTCCAATCTCACTCTCTCGCC 59.933 57.143 0.00 0.00 0.00 5.54
653 654 0.103937 CCAATCTCACTCTCTCGCCC 59.896 60.000 0.00 0.00 0.00 6.13
654 655 0.103937 CAATCTCACTCTCTCGCCCC 59.896 60.000 0.00 0.00 0.00 5.80
655 656 1.388065 AATCTCACTCTCTCGCCCCG 61.388 60.000 0.00 0.00 0.00 5.73
656 657 3.522731 CTCACTCTCTCGCCCCGG 61.523 72.222 0.00 0.00 0.00 5.73
669 670 3.330720 CCCGGCCTCCCCCATATC 61.331 72.222 0.00 0.00 0.00 1.63
670 671 2.203998 CCGGCCTCCCCCATATCT 60.204 66.667 0.00 0.00 0.00 1.98
671 672 2.596851 CCGGCCTCCCCCATATCTG 61.597 68.421 0.00 0.00 0.00 2.90
672 673 2.759795 GGCCTCCCCCATATCTGC 59.240 66.667 0.00 0.00 0.00 4.26
673 674 1.849823 GGCCTCCCCCATATCTGCT 60.850 63.158 0.00 0.00 0.00 4.24
674 675 1.682257 GCCTCCCCCATATCTGCTC 59.318 63.158 0.00 0.00 0.00 4.26
675 676 0.839853 GCCTCCCCCATATCTGCTCT 60.840 60.000 0.00 0.00 0.00 4.09
676 677 1.274712 CCTCCCCCATATCTGCTCTC 58.725 60.000 0.00 0.00 0.00 3.20
677 678 0.894141 CTCCCCCATATCTGCTCTCG 59.106 60.000 0.00 0.00 0.00 4.04
678 679 1.188219 TCCCCCATATCTGCTCTCGC 61.188 60.000 0.00 0.00 0.00 5.03
679 680 1.475169 CCCCCATATCTGCTCTCGCA 61.475 60.000 0.00 0.00 45.60 5.10
680 681 0.612229 CCCCATATCTGCTCTCGCAT 59.388 55.000 0.00 0.00 46.74 4.73
681 682 1.405256 CCCCATATCTGCTCTCGCATC 60.405 57.143 0.00 0.00 46.74 3.91
682 683 1.405256 CCCATATCTGCTCTCGCATCC 60.405 57.143 0.00 0.00 46.74 3.51
683 684 1.549620 CCATATCTGCTCTCGCATCCT 59.450 52.381 0.00 0.00 46.74 3.24
684 685 2.028294 CCATATCTGCTCTCGCATCCTT 60.028 50.000 0.00 0.00 46.74 3.36
685 686 3.556633 CCATATCTGCTCTCGCATCCTTT 60.557 47.826 0.00 0.00 46.74 3.11
686 687 1.950828 ATCTGCTCTCGCATCCTTTG 58.049 50.000 0.00 0.00 46.74 2.77
687 688 0.610174 TCTGCTCTCGCATCCTTTGT 59.390 50.000 0.00 0.00 46.74 2.83
688 689 0.725686 CTGCTCTCGCATCCTTTGTG 59.274 55.000 0.00 0.00 46.74 3.33
689 690 0.035317 TGCTCTCGCATCCTTTGTGT 59.965 50.000 0.00 0.00 42.25 3.72
690 691 0.723981 GCTCTCGCATCCTTTGTGTC 59.276 55.000 0.00 0.00 37.14 3.67
691 692 0.994995 CTCTCGCATCCTTTGTGTCG 59.005 55.000 0.00 0.00 37.14 4.35
692 693 0.317160 TCTCGCATCCTTTGTGTCGT 59.683 50.000 0.00 0.00 37.14 4.34
693 694 0.439985 CTCGCATCCTTTGTGTCGTG 59.560 55.000 0.00 0.00 37.14 4.35
694 695 0.948623 TCGCATCCTTTGTGTCGTGG 60.949 55.000 0.00 0.00 37.14 4.94
695 696 1.210155 GCATCCTTTGTGTCGTGGC 59.790 57.895 0.00 0.00 0.00 5.01
696 697 1.497278 CATCCTTTGTGTCGTGGCG 59.503 57.895 0.00 0.00 0.00 5.69
697 698 1.671054 ATCCTTTGTGTCGTGGCGG 60.671 57.895 0.00 0.00 0.00 6.13
698 699 4.025401 CCTTTGTGTCGTGGCGGC 62.025 66.667 0.00 0.00 0.00 6.53
699 700 3.276091 CTTTGTGTCGTGGCGGCA 61.276 61.111 7.97 7.97 39.83 5.69
700 701 3.240606 CTTTGTGTCGTGGCGGCAG 62.241 63.158 13.91 7.03 43.72 4.85
774 775 0.608640 GAAGGCGGGAAGAGTTGAGA 59.391 55.000 0.00 0.00 0.00 3.27
775 776 1.208293 GAAGGCGGGAAGAGTTGAGAT 59.792 52.381 0.00 0.00 0.00 2.75
783 784 4.034510 CGGGAAGAGTTGAGATATGTTTGC 59.965 45.833 0.00 0.00 0.00 3.68
793 794 1.127766 GATATGTTTGCGTGTGTGCGA 59.872 47.619 0.00 0.00 37.81 5.10
810 811 2.514592 AGCGTGCTTGCTGTGTGT 60.515 55.556 2.36 0.00 45.28 3.72
811 812 2.352686 GCGTGCTTGCTGTGTGTG 60.353 61.111 0.00 0.00 0.00 3.82
812 813 2.352686 CGTGCTTGCTGTGTGTGC 60.353 61.111 0.00 0.00 0.00 4.57
813 814 2.827051 CGTGCTTGCTGTGTGTGCT 61.827 57.895 0.00 0.00 0.00 4.40
814 815 1.298863 GTGCTTGCTGTGTGTGCTG 60.299 57.895 0.00 0.00 0.00 4.41
815 816 1.750018 TGCTTGCTGTGTGTGCTGT 60.750 52.632 0.00 0.00 0.00 4.40
824 825 0.451383 GTGTGTGCTGTGTGCTTGAA 59.549 50.000 0.00 0.00 43.37 2.69
874 875 1.232119 CACTTGCTGTGTGATCTGCA 58.768 50.000 0.00 0.00 41.53 4.41
875 876 1.197036 CACTTGCTGTGTGATCTGCAG 59.803 52.381 7.63 7.63 41.64 4.41
876 877 0.803117 CTTGCTGTGTGATCTGCAGG 59.197 55.000 15.13 0.00 41.64 4.85
877 878 1.239296 TTGCTGTGTGATCTGCAGGC 61.239 55.000 15.13 7.14 41.64 4.85
878 879 2.747822 GCTGTGTGATCTGCAGGCG 61.748 63.158 15.13 0.00 33.55 5.52
879 880 2.743538 TGTGTGATCTGCAGGCGC 60.744 61.111 15.13 13.40 39.24 6.53
880 881 3.857854 GTGTGATCTGCAGGCGCG 61.858 66.667 15.13 0.00 42.97 6.86
920 926 1.726853 GTGCTATGACCTTGCGTCTT 58.273 50.000 0.00 0.00 42.49 3.01
932 938 3.614616 CCTTGCGTCTTTGTACTCATCTC 59.385 47.826 0.00 0.00 0.00 2.75
933 939 4.489810 CTTGCGTCTTTGTACTCATCTCT 58.510 43.478 0.00 0.00 0.00 3.10
935 941 4.486090 TGCGTCTTTGTACTCATCTCTTC 58.514 43.478 0.00 0.00 0.00 2.87
936 942 4.218635 TGCGTCTTTGTACTCATCTCTTCT 59.781 41.667 0.00 0.00 0.00 2.85
980 986 0.032540 CAACCAAGGAGCAGCAAACC 59.967 55.000 0.00 0.00 0.00 3.27
995 1001 0.404040 AAACCGGAGCCATCCTTTCA 59.596 50.000 9.46 0.00 44.22 2.69
1023 1060 3.036429 GCTGTGGACTGGGCTAGGG 62.036 68.421 2.02 0.00 0.00 3.53
1026 1063 2.204074 TGGACTGGGCTAGGGCAA 60.204 61.111 2.02 0.00 40.87 4.52
1035 1072 4.451150 CTAGGGCAAGCGGCGACA 62.451 66.667 12.98 0.00 46.16 4.35
1084 1121 1.459455 CGGGCTCGTCTCCATGATCT 61.459 60.000 0.00 0.00 0.00 2.75
1113 1150 1.800681 GCTTACGGCTCGGCAAAAT 59.199 52.632 0.00 0.00 38.06 1.82
1115 1152 1.399089 GCTTACGGCTCGGCAAAATAA 59.601 47.619 0.00 0.00 38.06 1.40
1117 1154 2.676632 TACGGCTCGGCAAAATAAGA 57.323 45.000 0.00 0.00 0.00 2.10
1118 1155 1.369625 ACGGCTCGGCAAAATAAGAG 58.630 50.000 0.00 0.00 0.00 2.85
1119 1156 1.338769 ACGGCTCGGCAAAATAAGAGT 60.339 47.619 0.00 0.00 33.57 3.24
1245 1287 2.125512 GACGCCCATGAGCTCGTT 60.126 61.111 5.46 0.00 35.12 3.85
1446 1501 0.944311 CCAGTGTTGAACCGTCTCCG 60.944 60.000 0.00 0.00 0.00 4.63
1585 2470 0.036294 GAGGTGGCACAAGAGGTACC 60.036 60.000 20.82 2.73 44.16 3.34
1690 2900 0.794473 GGCTTTGCTACGGTGTACAC 59.206 55.000 18.01 18.01 0.00 2.90
1702 2912 1.302192 TGTACACGGGCAGGCTTTC 60.302 57.895 0.00 0.00 0.00 2.62
1737 2947 1.064240 TGGCCATCAAGCACATCATCT 60.064 47.619 0.00 0.00 0.00 2.90
1765 2978 0.594028 CGGCGCGCTGTAGAAGATTA 60.594 55.000 31.37 0.00 0.00 1.75
1767 2980 0.853419 GCGCGCTGTAGAAGATTACC 59.147 55.000 26.67 0.00 0.00 2.85
1779 2992 3.834813 AGAAGATTACCACACAGAGCTCA 59.165 43.478 17.77 0.00 0.00 4.26
1800 3013 2.050144 ACATCCTATCACGGCTCCAAT 58.950 47.619 0.00 0.00 0.00 3.16
1835 3048 0.321653 GCCTCCTTGGATCGTGTGTT 60.322 55.000 0.00 0.00 38.35 3.32
1898 3113 2.980246 AGAAAAAGGGCCTGCTAACT 57.020 45.000 6.92 0.27 0.00 2.24
1924 3148 1.003233 GAAAGGAGCCGGAAGTGCT 60.003 57.895 5.05 0.00 39.72 4.40
1925 3149 1.301677 GAAAGGAGCCGGAAGTGCTG 61.302 60.000 5.05 0.00 37.67 4.41
1934 3176 0.035458 CGGAAGTGCTGGAGAGGTTT 59.965 55.000 0.00 0.00 0.00 3.27
2039 3281 1.019673 CAATGTCCTGGAAGATGCGG 58.980 55.000 0.00 0.00 34.07 5.69
2051 3293 3.807631 GATGCGGGCCGATGTGCTA 62.808 63.158 33.44 6.09 0.00 3.49
2055 3297 2.786495 CGGGCCGATGTGCTACTCT 61.786 63.158 24.41 0.00 0.00 3.24
2060 3302 0.380733 CCGATGTGCTACTCTGCGTA 59.619 55.000 0.00 0.00 35.36 4.42
2075 3317 2.002899 CGTATCACGCGCCATTGAA 58.997 52.632 5.73 0.00 33.65 2.69
2178 3420 1.151777 ACGTGTGACAGACTTTGGCG 61.152 55.000 0.82 0.00 37.78 5.69
2183 3425 1.664965 GACAGACTTTGGCGCGTCT 60.665 57.895 13.81 9.52 40.92 4.18
2184 3426 0.388134 GACAGACTTTGGCGCGTCTA 60.388 55.000 13.81 0.00 38.37 2.59
2213 3455 0.904865 ACATGGCGAGTGAGGAGGAA 60.905 55.000 0.00 0.00 0.00 3.36
2221 3463 2.159170 CGAGTGAGGAGGAAGGAATGAC 60.159 54.545 0.00 0.00 0.00 3.06
2225 3467 4.017037 AGTGAGGAGGAAGGAATGACTCTA 60.017 45.833 0.00 0.00 0.00 2.43
2227 3469 4.959210 TGAGGAGGAAGGAATGACTCTAAG 59.041 45.833 0.00 0.00 0.00 2.18
2271 3516 2.203070 CCCCTGAGTACGCCATGC 60.203 66.667 0.00 0.00 0.00 4.06
2312 3557 1.897423 CGATGTGTACAGCCTGGGA 59.103 57.895 0.00 0.00 0.00 4.37
2324 3569 1.077930 CCTGGGAGTGGTGATGCTG 60.078 63.158 0.00 0.00 0.00 4.41
2339 3584 2.024176 TGCTGGAGGTTCTAACAGGA 57.976 50.000 0.00 0.00 0.00 3.86
2343 3588 3.753797 GCTGGAGGTTCTAACAGGAAAAG 59.246 47.826 0.00 0.00 0.00 2.27
2351 3596 5.944007 GGTTCTAACAGGAAAAGAGGCATTA 59.056 40.000 0.00 0.00 0.00 1.90
2354 3599 6.957631 TCTAACAGGAAAAGAGGCATTATCA 58.042 36.000 0.00 0.00 0.00 2.15
2364 3609 3.464833 AGAGGCATTATCACAAGGGGATT 59.535 43.478 0.00 0.00 0.00 3.01
2399 3653 0.379669 GATTGGCATCCTTCGCAGTG 59.620 55.000 0.00 0.00 0.00 3.66
2402 3656 2.747460 GCATCCTTCGCAGTGCCA 60.747 61.111 10.11 0.00 0.00 4.92
2444 3698 0.900647 AGGAGTTGCTAGACAGGCGT 60.901 55.000 0.00 0.00 0.00 5.68
2546 3800 1.450312 GAAGGACCGACCAGCCATG 60.450 63.158 0.00 0.00 42.04 3.66
2651 3941 3.250323 CGTGTCAGCGGCATCTCG 61.250 66.667 1.45 1.24 0.00 4.04
2663 3953 0.806102 GCATCTCGTCGGCAAGCTAA 60.806 55.000 0.00 0.00 0.00 3.09
2670 3960 1.466950 CGTCGGCAAGCTAAAATTCCA 59.533 47.619 0.00 0.00 0.00 3.53
2680 3970 6.258160 CAAGCTAAAATTCCAATCTGGTACG 58.742 40.000 0.00 0.00 39.03 3.67
2704 3999 5.176590 GCTACAAACTCACTGAACTCTCTTG 59.823 44.000 0.00 0.00 0.00 3.02
2711 4006 6.686630 ACTCACTGAACTCTCTTGACATTAG 58.313 40.000 0.00 0.00 0.00 1.73
2712 4007 5.473931 TCACTGAACTCTCTTGACATTAGC 58.526 41.667 0.00 0.00 0.00 3.09
2723 4018 7.044181 TCTCTTGACATTAGCGAATTCAATCT 58.956 34.615 6.22 1.98 29.60 2.40
2728 4025 7.592938 TGACATTAGCGAATTCAATCTTGTTT 58.407 30.769 6.22 0.00 0.00 2.83
2734 4031 6.913170 AGCGAATTCAATCTTGTTTGTACAT 58.087 32.000 6.22 0.00 33.44 2.29
2741 4038 9.850628 ATTCAATCTTGTTTGTACATTGATGAG 57.149 29.630 0.00 0.00 33.29 2.90
2763 4060 4.162509 AGGAGGGCTCACTACTCATTTTAC 59.837 45.833 0.00 0.00 32.98 2.01
2842 4140 3.379445 GGCGTCCTCTCCAACGGA 61.379 66.667 0.00 0.00 39.24 4.69
2863 4161 3.925630 ATTGCACTGACCGGGGCAG 62.926 63.158 28.40 28.40 37.59 4.85
2885 4183 4.379243 CAGGCTTCACGACGGGCT 62.379 66.667 0.00 0.00 36.29 5.19
2923 4221 2.094182 GTGCTTCAGTAACCCGATGAGA 60.094 50.000 0.00 0.00 0.00 3.27
2931 4229 3.775316 AGTAACCCGATGAGAATCCTGTT 59.225 43.478 0.00 0.00 0.00 3.16
2932 4230 4.960469 AGTAACCCGATGAGAATCCTGTTA 59.040 41.667 0.00 0.00 0.00 2.41
2933 4231 3.821421 ACCCGATGAGAATCCTGTTAC 57.179 47.619 0.00 0.00 0.00 2.50
2937 4235 4.585162 CCCGATGAGAATCCTGTTACTACT 59.415 45.833 0.00 0.00 0.00 2.57
2961 4259 2.159572 ACGTATGCAATGGTCGCTTTTC 60.160 45.455 0.00 0.00 0.00 2.29
2972 4270 2.474032 GGTCGCTTTTCGTAATCTGCAC 60.474 50.000 0.00 0.00 39.67 4.57
2974 4272 1.524548 GCTTTTCGTAATCTGCACGC 58.475 50.000 0.00 0.00 39.23 5.34
2984 4282 3.389211 CTGCACGCGCTTGTTTGC 61.389 61.111 15.84 8.31 39.64 3.68
3011 4309 0.178990 GTTTGGGACAGAGCTTGGGT 60.179 55.000 0.00 0.00 42.39 4.51
3014 4312 1.059584 TGGGACAGAGCTTGGGTTGA 61.060 55.000 0.00 0.00 0.00 3.18
3016 4314 1.478654 GGGACAGAGCTTGGGTTGAAA 60.479 52.381 0.00 0.00 0.00 2.69
3060 4360 2.357593 CTTCACCACCCACCCTGCTT 62.358 60.000 0.00 0.00 0.00 3.91
3080 4382 4.212636 GCTTTGTTCTTCTAAGCGGTTACA 59.787 41.667 2.26 0.00 42.59 2.41
3106 4408 0.036164 AGGAACACAACATGCGGCTA 59.964 50.000 0.00 0.00 0.00 3.93
3119 4421 1.090052 GCGGCTAATGGTCACCACTC 61.090 60.000 0.00 0.00 35.80 3.51
3130 4432 5.401531 TGGTCACCACTCTACATAGTTTC 57.598 43.478 0.00 0.00 0.00 2.78
3180 4482 1.607148 GTTTTTAGCCTGGAGTTGCGT 59.393 47.619 0.00 0.00 0.00 5.24
3232 4549 6.094603 GCTTCTCTTTCAAAGCCATTCATAGA 59.905 38.462 0.00 0.00 41.60 1.98
3242 5897 2.903135 GCCATTCATAGAGTAGGAGGCT 59.097 50.000 0.00 0.00 36.72 4.58
3288 5943 8.665685 TCTCGTTTTATTTTCTCTAAATCCAGC 58.334 33.333 0.00 0.00 37.60 4.85
3289 5944 8.561738 TCGTTTTATTTTCTCTAAATCCAGCT 57.438 30.769 0.00 0.00 37.60 4.24
3290 5945 8.665685 TCGTTTTATTTTCTCTAAATCCAGCTC 58.334 33.333 0.00 0.00 37.60 4.09
3291 5946 7.910683 CGTTTTATTTTCTCTAAATCCAGCTCC 59.089 37.037 0.00 0.00 37.60 4.70
3296 5951 7.454260 TTTTCTCTAAATCCAGCTCCTTTTC 57.546 36.000 0.00 0.00 0.00 2.29
3298 5953 3.873910 TCTAAATCCAGCTCCTTTTCGG 58.126 45.455 0.00 0.00 0.00 4.30
3301 5956 2.586648 ATCCAGCTCCTTTTCGGTTT 57.413 45.000 0.00 0.00 0.00 3.27
3303 5958 3.713826 TCCAGCTCCTTTTCGGTTTAT 57.286 42.857 0.00 0.00 0.00 1.40
3304 5959 3.343617 TCCAGCTCCTTTTCGGTTTATG 58.656 45.455 0.00 0.00 0.00 1.90
3305 5960 3.008594 TCCAGCTCCTTTTCGGTTTATGA 59.991 43.478 0.00 0.00 0.00 2.15
3306 5961 3.375299 CCAGCTCCTTTTCGGTTTATGAG 59.625 47.826 0.00 0.00 0.00 2.90
3307 5962 3.375299 CAGCTCCTTTTCGGTTTATGAGG 59.625 47.826 0.00 0.00 0.00 3.86
3308 5963 2.097629 GCTCCTTTTCGGTTTATGAGGC 59.902 50.000 0.00 0.00 0.00 4.70
3309 5964 3.610911 CTCCTTTTCGGTTTATGAGGCT 58.389 45.455 0.00 0.00 0.00 4.58
3311 5966 3.756434 TCCTTTTCGGTTTATGAGGCTTG 59.244 43.478 0.00 0.00 0.00 4.01
3312 5967 3.501950 CTTTTCGGTTTATGAGGCTTGC 58.498 45.455 0.00 0.00 0.00 4.01
3313 5968 1.083489 TTCGGTTTATGAGGCTTGCG 58.917 50.000 0.00 0.00 0.00 4.85
3316 5971 1.644786 GGTTTATGAGGCTTGCGCGT 61.645 55.000 8.43 0.00 36.88 6.01
3321 5976 0.598680 ATGAGGCTTGCGCGTATCTC 60.599 55.000 8.43 11.40 36.88 2.75
3322 5977 1.066587 GAGGCTTGCGCGTATCTCT 59.933 57.895 8.43 0.20 36.88 3.10
3323 5978 0.311165 GAGGCTTGCGCGTATCTCTA 59.689 55.000 8.43 0.00 36.88 2.43
3324 5979 0.312416 AGGCTTGCGCGTATCTCTAG 59.688 55.000 8.43 0.00 36.88 2.43
3325 5980 0.664767 GGCTTGCGCGTATCTCTAGG 60.665 60.000 8.43 0.00 36.88 3.02
3326 5981 0.030908 GCTTGCGCGTATCTCTAGGT 59.969 55.000 8.43 0.00 0.00 3.08
3327 5982 1.536284 GCTTGCGCGTATCTCTAGGTT 60.536 52.381 8.43 0.00 0.00 3.50
3328 5983 2.810650 CTTGCGCGTATCTCTAGGTTT 58.189 47.619 8.43 0.00 0.00 3.27
3329 5984 3.794475 GCTTGCGCGTATCTCTAGGTTTA 60.794 47.826 8.43 0.00 0.00 2.01
3330 5985 3.344904 TGCGCGTATCTCTAGGTTTAC 57.655 47.619 8.43 0.00 0.00 2.01
3331 5986 2.684374 TGCGCGTATCTCTAGGTTTACA 59.316 45.455 8.43 0.00 0.00 2.41
3333 5988 4.107622 GCGCGTATCTCTAGGTTTACAAA 58.892 43.478 8.43 0.00 0.00 2.83
3334 5989 4.563976 GCGCGTATCTCTAGGTTTACAAAA 59.436 41.667 8.43 0.00 0.00 2.44
3335 5990 5.062558 GCGCGTATCTCTAGGTTTACAAAAA 59.937 40.000 8.43 0.00 0.00 1.94
3362 6017 8.951787 ACCAACGTAAAGCAAGTTATATATCA 57.048 30.769 0.00 0.00 0.00 2.15
3364 6019 8.002107 CCAACGTAAAGCAAGTTATATATCACG 58.998 37.037 0.00 0.00 0.00 4.35
3365 6020 8.748582 CAACGTAAAGCAAGTTATATATCACGA 58.251 33.333 0.00 0.00 0.00 4.35
3366 6021 8.861033 ACGTAAAGCAAGTTATATATCACGAA 57.139 30.769 0.00 0.00 0.00 3.85
3397 6117 6.211587 TCATTAGAAACTTCGGATCGGTTA 57.788 37.500 0.00 0.00 0.00 2.85
3402 6122 4.928020 AGAAACTTCGGATCGGTTACTTTC 59.072 41.667 0.00 4.46 0.00 2.62
3406 6126 4.704057 ACTTCGGATCGGTTACTTTCTAGT 59.296 41.667 0.00 0.00 38.44 2.57
3408 6128 3.379372 TCGGATCGGTTACTTTCTAGTGG 59.621 47.826 0.00 0.00 35.78 4.00
3410 6130 4.336433 CGGATCGGTTACTTTCTAGTGGTA 59.664 45.833 0.00 0.00 35.78 3.25
3411 6131 5.009410 CGGATCGGTTACTTTCTAGTGGTAT 59.991 44.000 0.00 0.00 35.78 2.73
3418 6138 9.428097 CGGTTACTTTCTAGTGGTATAGTTTTT 57.572 33.333 0.00 0.00 35.78 1.94
3422 6142 8.843885 ACTTTCTAGTGGTATAGTTTTTGGAC 57.156 34.615 0.00 0.00 31.99 4.02
3423 6143 8.657712 ACTTTCTAGTGGTATAGTTTTTGGACT 58.342 33.333 0.00 0.00 31.99 3.85
3443 6163 9.599866 TTGGACTATACAACTCATCTTATGTTG 57.400 33.333 0.00 0.00 44.44 3.33
3444 6164 8.204160 TGGACTATACAACTCATCTTATGTTGG 58.796 37.037 9.39 0.00 43.54 3.77
3445 6165 8.204836 GGACTATACAACTCATCTTATGTTGGT 58.795 37.037 9.39 0.00 43.54 3.67
3446 6166 9.250624 GACTATACAACTCATCTTATGTTGGTC 57.749 37.037 9.39 4.11 43.54 4.02
3447 6167 8.758829 ACTATACAACTCATCTTATGTTGGTCA 58.241 33.333 9.39 0.00 43.54 4.02
3448 6168 9.599866 CTATACAACTCATCTTATGTTGGTCAA 57.400 33.333 9.39 0.00 43.54 3.18
3450 6170 7.765695 ACAACTCATCTTATGTTGGTCAAAT 57.234 32.000 9.39 0.00 43.54 2.32
3471 6191 9.529325 TCAAATTATATATCTAGGTATGCGTGC 57.471 33.333 5.73 0.00 0.00 5.34
3472 6192 9.313118 CAAATTATATATCTAGGTATGCGTGCA 57.687 33.333 5.73 0.00 0.00 4.57
3473 6193 9.884636 AAATTATATATCTAGGTATGCGTGCAA 57.115 29.630 5.73 0.00 0.00 4.08
3474 6194 9.534565 AATTATATATCTAGGTATGCGTGCAAG 57.465 33.333 5.73 0.00 0.00 4.01
3475 6195 1.871080 ATCTAGGTATGCGTGCAAGC 58.129 50.000 18.28 18.28 37.71 4.01
3477 6197 0.179073 CTAGGTATGCGTGCAAGCCT 60.179 55.000 22.00 14.71 37.67 4.58
3478 6198 0.251916 TAGGTATGCGTGCAAGCCTT 59.748 50.000 22.00 11.82 36.25 4.35
3479 6199 0.251916 AGGTATGCGTGCAAGCCTTA 59.748 50.000 22.00 10.82 32.82 2.69
3480 6200 1.134098 AGGTATGCGTGCAAGCCTTAT 60.134 47.619 22.00 11.28 32.82 1.73
3482 6202 2.875933 GGTATGCGTGCAAGCCTTATAA 59.124 45.455 22.00 2.10 36.02 0.98
3484 6204 2.911819 TGCGTGCAAGCCTTATAAAC 57.088 45.000 22.00 0.00 36.02 2.01
3485 6205 1.470890 TGCGTGCAAGCCTTATAAACC 59.529 47.619 22.00 0.00 36.02 3.27
3486 6206 1.531058 GCGTGCAAGCCTTATAAACCG 60.531 52.381 14.16 0.00 0.00 4.44
3488 6208 2.361789 GTGCAAGCCTTATAAACCGGA 58.638 47.619 9.46 0.00 0.00 5.14
3489 6209 2.750712 GTGCAAGCCTTATAAACCGGAA 59.249 45.455 9.46 0.00 0.00 4.30
3490 6210 3.191791 GTGCAAGCCTTATAAACCGGAAA 59.808 43.478 9.46 0.00 0.00 3.13
3491 6211 4.020543 TGCAAGCCTTATAAACCGGAAAT 58.979 39.130 9.46 0.08 0.00 2.17
3492 6212 4.142271 TGCAAGCCTTATAAACCGGAAATG 60.142 41.667 9.46 0.00 0.00 2.32
3493 6213 4.097286 GCAAGCCTTATAAACCGGAAATGA 59.903 41.667 9.46 0.00 0.00 2.57
3495 6215 4.461198 AGCCTTATAAACCGGAAATGAGG 58.539 43.478 9.46 14.38 31.33 3.86
3496 6216 4.079958 AGCCTTATAAACCGGAAATGAGGT 60.080 41.667 9.46 2.65 43.68 3.85
3497 6217 5.131475 AGCCTTATAAACCGGAAATGAGGTA 59.869 40.000 9.46 0.00 40.37 3.08
3498 6218 5.469084 GCCTTATAAACCGGAAATGAGGTAG 59.531 44.000 9.46 0.00 40.37 3.18
3541 6636 9.680315 ACTTGATTTAGATCTGTAGTATAACGC 57.320 33.333 5.18 0.00 33.28 4.84
3555 6650 2.987413 TAACGCTGGCACTTTTGATG 57.013 45.000 0.00 0.00 0.00 3.07
3557 6652 1.032014 ACGCTGGCACTTTTGATGTT 58.968 45.000 0.00 0.00 0.00 2.71
3562 6657 3.491447 GCTGGCACTTTTGATGTTGAACT 60.491 43.478 0.00 0.00 0.00 3.01
3574 6669 4.761739 TGATGTTGAACTAGCCTGGAAAAG 59.238 41.667 0.00 0.00 0.00 2.27
3576 6671 4.787551 TGTTGAACTAGCCTGGAAAAGAA 58.212 39.130 0.00 0.00 0.00 2.52
3577 6672 4.578928 TGTTGAACTAGCCTGGAAAAGAAC 59.421 41.667 0.00 0.00 0.00 3.01
3580 6675 3.983044 ACTAGCCTGGAAAAGAACGAT 57.017 42.857 0.00 0.00 0.00 3.73
3587 6682 4.201920 GCCTGGAAAAGAACGATGGATTAC 60.202 45.833 0.00 0.00 0.00 1.89
3602 6697 4.699637 TGGATTACTATGCTGTTAACGGG 58.300 43.478 16.13 5.39 0.00 5.28
3606 6701 5.674052 TTACTATGCTGTTAACGGGGTAA 57.326 39.130 16.13 8.77 0.00 2.85
3651 6746 4.920999 TCAGATGTGAAATGTTCCATGGA 58.079 39.130 11.44 11.44 0.00 3.41
3652 6747 5.512298 TCAGATGTGAAATGTTCCATGGAT 58.488 37.500 17.06 0.00 0.00 3.41
3654 6749 4.577693 AGATGTGAAATGTTCCATGGATCG 59.422 41.667 17.06 0.00 0.00 3.69
3655 6750 3.949132 TGTGAAATGTTCCATGGATCGA 58.051 40.909 17.06 6.36 0.00 3.59
3656 6751 4.331108 TGTGAAATGTTCCATGGATCGAA 58.669 39.130 17.06 0.00 0.00 3.71
3658 6753 4.396166 GTGAAATGTTCCATGGATCGAAGT 59.604 41.667 17.06 1.64 0.00 3.01
3659 6754 4.635765 TGAAATGTTCCATGGATCGAAGTC 59.364 41.667 17.06 11.08 0.00 3.01
3660 6755 2.293677 TGTTCCATGGATCGAAGTCG 57.706 50.000 17.06 0.00 41.45 4.18
3663 6758 0.459899 TCCATGGATCGAAGTCGTGG 59.540 55.000 11.44 14.40 40.80 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.614535 CGGAAGAATCCAAGCTGAAAACAG 60.615 45.833 0.00 0.00 46.97 3.16
2 3 3.253188 CGGAAGAATCCAAGCTGAAAACA 59.747 43.478 0.00 0.00 46.97 2.83
3 4 3.502211 TCGGAAGAATCCAAGCTGAAAAC 59.498 43.478 0.00 0.00 46.97 2.43
4 5 3.750371 TCGGAAGAATCCAAGCTGAAAA 58.250 40.909 0.00 0.00 46.97 2.29
5 6 3.417069 TCGGAAGAATCCAAGCTGAAA 57.583 42.857 0.00 0.00 46.97 2.69
7 8 2.768527 AGATCGGAAGAATCCAAGCTGA 59.231 45.455 0.00 0.00 46.97 4.26
8 9 3.191078 AGATCGGAAGAATCCAAGCTG 57.809 47.619 0.00 0.00 46.97 4.24
10 11 4.038642 AGAGTAGATCGGAAGAATCCAAGC 59.961 45.833 0.00 0.00 46.97 4.01
11 12 5.782893 AGAGTAGATCGGAAGAATCCAAG 57.217 43.478 0.00 0.00 46.97 3.61
12 13 6.366340 AGTAGAGTAGATCGGAAGAATCCAA 58.634 40.000 0.00 0.00 46.97 3.53
13 14 5.942961 AGTAGAGTAGATCGGAAGAATCCA 58.057 41.667 0.00 0.00 46.97 3.41
20 21 7.598189 CGATGAATAGTAGAGTAGATCGGAA 57.402 40.000 0.00 0.00 0.00 4.30
22 23 6.352682 CCGATGAATAGTAGAGTAGATCGG 57.647 45.833 0.00 0.00 43.53 4.18
23 24 5.501092 CGCCGATGAATAGTAGAGTAGATCG 60.501 48.000 0.00 0.00 33.06 3.69
25 26 4.636648 CCGCCGATGAATAGTAGAGTAGAT 59.363 45.833 0.00 0.00 0.00 1.98
26 27 4.001652 CCGCCGATGAATAGTAGAGTAGA 58.998 47.826 0.00 0.00 0.00 2.59
27 28 3.426426 GCCGCCGATGAATAGTAGAGTAG 60.426 52.174 0.00 0.00 0.00 2.57
32 33 0.732880 CCGCCGCCGATGAATAGTAG 60.733 60.000 0.00 0.00 36.29 2.57
33 34 1.287815 CCGCCGCCGATGAATAGTA 59.712 57.895 0.00 0.00 36.29 1.82
34 35 2.029073 CCGCCGCCGATGAATAGT 59.971 61.111 0.00 0.00 36.29 2.12
35 36 1.157870 AAACCGCCGCCGATGAATAG 61.158 55.000 0.00 0.00 36.29 1.73
36 37 1.153329 AAACCGCCGCCGATGAATA 60.153 52.632 0.00 0.00 36.29 1.75
38 39 3.122323 GAAACCGCCGCCGATGAA 61.122 61.111 0.00 0.00 36.29 2.57
39 40 4.077184 AGAAACCGCCGCCGATGA 62.077 61.111 0.00 0.00 36.29 2.92
40 41 3.864686 CAGAAACCGCCGCCGATG 61.865 66.667 0.00 0.00 36.29 3.84
42 43 4.612412 AACAGAAACCGCCGCCGA 62.612 61.111 0.00 0.00 36.29 5.54
44 45 2.258726 AAGAACAGAAACCGCCGCC 61.259 57.895 0.00 0.00 0.00 6.13
45 46 1.082104 CAAGAACAGAAACCGCCGC 60.082 57.895 0.00 0.00 0.00 6.53
46 47 0.512952 CTCAAGAACAGAAACCGCCG 59.487 55.000 0.00 0.00 0.00 6.46
49 50 3.621268 TCAACACTCAAGAACAGAAACCG 59.379 43.478 0.00 0.00 0.00 4.44
50 51 5.757850 ATCAACACTCAAGAACAGAAACC 57.242 39.130 0.00 0.00 0.00 3.27
51 52 6.785191 TGAATCAACACTCAAGAACAGAAAC 58.215 36.000 0.00 0.00 0.00 2.78
53 54 7.420002 CATTGAATCAACACTCAAGAACAGAA 58.580 34.615 0.00 0.00 35.14 3.02
54 55 6.016860 CCATTGAATCAACACTCAAGAACAGA 60.017 38.462 0.00 0.00 35.14 3.41
56 57 5.009911 CCCATTGAATCAACACTCAAGAACA 59.990 40.000 0.00 0.00 35.14 3.18
57 58 5.464168 CCCATTGAATCAACACTCAAGAAC 58.536 41.667 0.00 0.00 35.14 3.01
59 60 4.081406 CCCCATTGAATCAACACTCAAGA 58.919 43.478 0.00 0.00 35.14 3.02
60 61 3.367703 GCCCCATTGAATCAACACTCAAG 60.368 47.826 0.00 0.00 35.14 3.02
62 63 2.170166 GCCCCATTGAATCAACACTCA 58.830 47.619 0.00 0.00 0.00 3.41
66 67 4.529769 TGTTAATGCCCCATTGAATCAACA 59.470 37.500 0.00 0.00 35.54 3.33
67 68 4.869861 GTGTTAATGCCCCATTGAATCAAC 59.130 41.667 0.00 0.00 35.54 3.18
68 69 4.381398 CGTGTTAATGCCCCATTGAATCAA 60.381 41.667 0.00 0.00 35.54 2.57
69 70 3.130164 CGTGTTAATGCCCCATTGAATCA 59.870 43.478 0.94 0.00 35.54 2.57
70 71 3.380004 TCGTGTTAATGCCCCATTGAATC 59.620 43.478 0.94 0.00 35.54 2.52
71 72 3.130340 GTCGTGTTAATGCCCCATTGAAT 59.870 43.478 0.94 0.00 35.54 2.57
72 73 2.490115 GTCGTGTTAATGCCCCATTGAA 59.510 45.455 0.94 0.00 35.54 2.69
74 75 1.202132 CGTCGTGTTAATGCCCCATTG 60.202 52.381 0.94 0.00 35.54 2.82
75 76 1.091537 CGTCGTGTTAATGCCCCATT 58.908 50.000 0.00 0.00 37.80 3.16
76 77 0.250793 TCGTCGTGTTAATGCCCCAT 59.749 50.000 0.00 0.00 0.00 4.00
77 78 0.671163 GTCGTCGTGTTAATGCCCCA 60.671 55.000 0.00 0.00 0.00 4.96
78 79 0.390735 AGTCGTCGTGTTAATGCCCC 60.391 55.000 0.00 0.00 0.00 5.80
79 80 1.392510 GAAGTCGTCGTGTTAATGCCC 59.607 52.381 0.00 0.00 0.00 5.36
80 81 1.392510 GGAAGTCGTCGTGTTAATGCC 59.607 52.381 0.00 0.00 0.00 4.40
81 82 2.334838 AGGAAGTCGTCGTGTTAATGC 58.665 47.619 0.00 0.00 0.00 3.56
82 83 5.159209 AGTTAGGAAGTCGTCGTGTTAATG 58.841 41.667 0.00 0.00 0.00 1.90
84 85 4.836125 AGTTAGGAAGTCGTCGTGTTAA 57.164 40.909 0.00 0.00 0.00 2.01
85 86 6.500684 AATAGTTAGGAAGTCGTCGTGTTA 57.499 37.500 0.00 0.00 0.00 2.41
86 87 5.382618 AATAGTTAGGAAGTCGTCGTGTT 57.617 39.130 0.00 0.00 0.00 3.32
87 88 5.382618 AAATAGTTAGGAAGTCGTCGTGT 57.617 39.130 0.00 0.00 0.00 4.49
88 89 6.549952 AGTAAATAGTTAGGAAGTCGTCGTG 58.450 40.000 0.00 0.00 0.00 4.35
89 90 6.749923 AGTAAATAGTTAGGAAGTCGTCGT 57.250 37.500 0.00 0.00 0.00 4.34
90 91 7.688372 TGTAGTAAATAGTTAGGAAGTCGTCG 58.312 38.462 0.00 0.00 0.00 5.12
102 103 9.483916 GGGCAAAATTTGTTGTAGTAAATAGTT 57.516 29.630 7.60 0.00 0.00 2.24
103 104 7.810759 CGGGCAAAATTTGTTGTAGTAAATAGT 59.189 33.333 7.60 0.00 0.00 2.12
105 106 7.808856 GTCGGGCAAAATTTGTTGTAGTAAATA 59.191 33.333 7.60 0.00 0.00 1.40
106 107 6.643360 GTCGGGCAAAATTTGTTGTAGTAAAT 59.357 34.615 7.60 0.00 0.00 1.40
107 108 5.978322 GTCGGGCAAAATTTGTTGTAGTAAA 59.022 36.000 7.60 0.00 0.00 2.01
108 109 5.299782 AGTCGGGCAAAATTTGTTGTAGTAA 59.700 36.000 7.60 0.00 0.00 2.24
109 110 4.822896 AGTCGGGCAAAATTTGTTGTAGTA 59.177 37.500 7.60 0.00 0.00 1.82
110 111 3.634910 AGTCGGGCAAAATTTGTTGTAGT 59.365 39.130 7.60 0.00 0.00 2.73
112 113 3.004944 GGAGTCGGGCAAAATTTGTTGTA 59.995 43.478 7.60 0.00 0.00 2.41
113 114 2.223947 GGAGTCGGGCAAAATTTGTTGT 60.224 45.455 7.60 0.00 0.00 3.32
115 116 1.000717 CGGAGTCGGGCAAAATTTGTT 60.001 47.619 7.60 0.00 0.00 2.83
117 118 3.399879 CGGAGTCGGGCAAAATTTG 57.600 52.632 0.57 0.57 0.00 2.32
135 136 4.176752 GTCATCGCCCCTCCCACC 62.177 72.222 0.00 0.00 0.00 4.61
137 138 3.083349 CTGTCATCGCCCCTCCCA 61.083 66.667 0.00 0.00 0.00 4.37
138 139 4.554036 GCTGTCATCGCCCCTCCC 62.554 72.222 0.00 0.00 0.00 4.30
139 140 3.746949 CTGCTGTCATCGCCCCTCC 62.747 68.421 0.00 0.00 0.00 4.30
141 142 4.479993 GCTGCTGTCATCGCCCCT 62.480 66.667 0.00 0.00 0.00 4.79
146 147 3.260483 GGAGCGCTGCTGTCATCG 61.260 66.667 22.85 0.00 39.88 3.84
148 149 1.449246 GAAGGAGCGCTGCTGTCAT 60.449 57.895 32.87 16.95 39.88 3.06
149 150 2.047844 GAAGGAGCGCTGCTGTCA 60.048 61.111 32.87 0.00 39.88 3.58
150 151 3.184683 CGAAGGAGCGCTGCTGTC 61.185 66.667 32.87 26.18 39.88 3.51
158 159 5.610612 CATTGAAATGAGCCGAAGGAGCG 62.611 52.174 0.00 0.00 45.51 5.03
159 160 2.223433 CATTGAAATGAGCCGAAGGAGC 60.223 50.000 0.00 0.00 45.51 4.70
160 161 3.012518 ACATTGAAATGAGCCGAAGGAG 58.987 45.455 9.94 0.00 45.45 3.69
161 162 3.071874 ACATTGAAATGAGCCGAAGGA 57.928 42.857 9.94 0.00 45.45 3.36
162 163 3.855689 AACATTGAAATGAGCCGAAGG 57.144 42.857 9.94 0.00 45.41 3.46
164 165 4.582701 ACAAACATTGAAATGAGCCGAA 57.417 36.364 9.94 0.00 39.67 4.30
166 167 5.046910 AGTACAAACATTGAAATGAGCCG 57.953 39.130 9.94 0.00 39.67 5.52
167 168 5.088739 CGAGTACAAACATTGAAATGAGCC 58.911 41.667 9.94 0.00 39.67 4.70
168 169 5.689819 ACGAGTACAAACATTGAAATGAGC 58.310 37.500 9.94 0.00 39.67 4.26
169 170 6.009474 CGACGAGTACAAACATTGAAATGAG 58.991 40.000 9.94 2.55 39.67 2.90
170 171 5.613795 GCGACGAGTACAAACATTGAAATGA 60.614 40.000 9.94 0.00 39.67 2.57
172 173 4.451096 AGCGACGAGTACAAACATTGAAAT 59.549 37.500 0.00 0.00 0.00 2.17
173 174 3.805422 AGCGACGAGTACAAACATTGAAA 59.195 39.130 0.00 0.00 0.00 2.69
174 175 3.386486 AGCGACGAGTACAAACATTGAA 58.614 40.909 0.00 0.00 0.00 2.69
175 176 3.021269 AGCGACGAGTACAAACATTGA 57.979 42.857 0.00 0.00 0.00 2.57
176 177 3.303495 CCTAGCGACGAGTACAAACATTG 59.697 47.826 0.00 0.00 0.00 2.82
177 178 3.057033 ACCTAGCGACGAGTACAAACATT 60.057 43.478 0.00 0.00 0.00 2.71
178 179 2.490903 ACCTAGCGACGAGTACAAACAT 59.509 45.455 0.00 0.00 0.00 2.71
179 180 1.881973 ACCTAGCGACGAGTACAAACA 59.118 47.619 0.00 0.00 0.00 2.83
180 181 2.626088 ACCTAGCGACGAGTACAAAC 57.374 50.000 0.00 0.00 0.00 2.93
181 182 3.338249 ACTACCTAGCGACGAGTACAAA 58.662 45.455 0.00 0.00 0.00 2.83
182 183 2.932614 GACTACCTAGCGACGAGTACAA 59.067 50.000 0.00 0.00 0.00 2.41
183 184 2.167281 AGACTACCTAGCGACGAGTACA 59.833 50.000 0.00 0.00 0.00 2.90
184 185 2.820330 AGACTACCTAGCGACGAGTAC 58.180 52.381 0.00 0.00 0.00 2.73
185 186 3.243569 GGTAGACTACCTAGCGACGAGTA 60.244 52.174 22.37 0.00 45.52 2.59
186 187 2.482839 GGTAGACTACCTAGCGACGAGT 60.483 54.545 22.37 0.00 45.52 4.18
187 188 2.134346 GGTAGACTACCTAGCGACGAG 58.866 57.143 22.37 0.00 45.52 4.18
188 189 2.231215 GGTAGACTACCTAGCGACGA 57.769 55.000 22.37 0.00 45.52 4.20
193 194 3.075884 CCAGATCGGTAGACTACCTAGC 58.924 54.545 25.69 19.18 46.81 3.42
194 195 4.620589 TCCAGATCGGTAGACTACCTAG 57.379 50.000 25.69 13.70 46.81 3.02
195 196 6.887886 ATATCCAGATCGGTAGACTACCTA 57.112 41.667 25.69 17.62 46.81 3.08
196 197 5.782677 ATATCCAGATCGGTAGACTACCT 57.217 43.478 25.69 11.12 46.81 3.08
197 198 8.522542 AAATATATCCAGATCGGTAGACTACC 57.477 38.462 20.18 20.18 45.52 3.18
221 222 6.853720 TGACGAACACCAGAATTAACAAAAA 58.146 32.000 0.00 0.00 0.00 1.94
222 223 6.438259 TGACGAACACCAGAATTAACAAAA 57.562 33.333 0.00 0.00 0.00 2.44
223 224 6.627395 ATGACGAACACCAGAATTAACAAA 57.373 33.333 0.00 0.00 0.00 2.83
224 225 6.148150 GGTATGACGAACACCAGAATTAACAA 59.852 38.462 0.00 0.00 32.32 2.83
226 227 5.220340 CGGTATGACGAACACCAGAATTAAC 60.220 44.000 0.00 0.00 35.47 2.01
227 228 4.865925 CGGTATGACGAACACCAGAATTAA 59.134 41.667 0.00 0.00 35.47 1.40
229 230 3.259064 CGGTATGACGAACACCAGAATT 58.741 45.455 0.00 0.00 35.47 2.17
230 231 2.232941 ACGGTATGACGAACACCAGAAT 59.767 45.455 0.00 0.00 37.61 2.40
232 233 1.200716 GACGGTATGACGAACACCAGA 59.799 52.381 0.00 0.00 37.61 3.86
233 234 1.068125 TGACGGTATGACGAACACCAG 60.068 52.381 0.00 0.00 37.61 4.00
235 236 1.924524 CATGACGGTATGACGAACACC 59.075 52.381 0.00 0.00 37.61 4.16
237 238 3.793797 ATCATGACGGTATGACGAACA 57.206 42.857 0.00 0.00 39.68 3.18
239 240 6.566141 TCTTAAATCATGACGGTATGACGAA 58.434 36.000 0.00 1.78 39.68 3.85
240 241 6.139048 TCTTAAATCATGACGGTATGACGA 57.861 37.500 0.00 0.00 39.68 4.20
241 242 6.640907 TCATCTTAAATCATGACGGTATGACG 59.359 38.462 0.00 0.00 39.68 4.35
242 243 7.946655 TCATCTTAAATCATGACGGTATGAC 57.053 36.000 0.00 0.00 39.68 3.06
244 245 8.141835 TGTTCATCTTAAATCATGACGGTATG 57.858 34.615 0.00 0.00 0.00 2.39
245 246 8.204160 TCTGTTCATCTTAAATCATGACGGTAT 58.796 33.333 0.00 0.00 0.00 2.73
247 248 6.406370 TCTGTTCATCTTAAATCATGACGGT 58.594 36.000 0.00 0.00 0.00 4.83
250 251 8.357796 TCGATCTGTTCATCTTAAATCATGAC 57.642 34.615 0.00 0.00 0.00 3.06
251 252 8.947055 TTCGATCTGTTCATCTTAAATCATGA 57.053 30.769 0.00 0.00 0.00 3.07
252 253 9.595357 CATTCGATCTGTTCATCTTAAATCATG 57.405 33.333 0.00 0.00 0.00 3.07
253 254 9.334947 ACATTCGATCTGTTCATCTTAAATCAT 57.665 29.630 0.00 0.00 0.00 2.45
254 255 8.722480 ACATTCGATCTGTTCATCTTAAATCA 57.278 30.769 0.00 0.00 0.00 2.57
255 256 9.994432 AAACATTCGATCTGTTCATCTTAAATC 57.006 29.630 12.62 0.00 35.84 2.17
256 257 9.994432 GAAACATTCGATCTGTTCATCTTAAAT 57.006 29.630 12.62 0.00 35.84 1.40
257 258 8.450964 GGAAACATTCGATCTGTTCATCTTAAA 58.549 33.333 12.62 0.00 35.84 1.52
258 259 7.606073 TGGAAACATTCGATCTGTTCATCTTAA 59.394 33.333 12.62 0.18 35.84 1.85
259 260 7.102993 TGGAAACATTCGATCTGTTCATCTTA 58.897 34.615 12.62 2.51 35.84 2.10
260 261 5.939883 TGGAAACATTCGATCTGTTCATCTT 59.060 36.000 12.62 0.00 35.84 2.40
262 263 5.801350 TGGAAACATTCGATCTGTTCATC 57.199 39.130 12.62 8.61 35.84 2.92
263 264 6.573664 TTTGGAAACATTCGATCTGTTCAT 57.426 33.333 12.62 1.16 42.32 2.57
264 265 6.384258 TTTTGGAAACATTCGATCTGTTCA 57.616 33.333 12.62 6.54 42.32 3.18
286 287 8.519799 TCATTTCAAGTCTTCAGTACCTTTTT 57.480 30.769 0.00 0.00 0.00 1.94
287 288 8.519799 TTCATTTCAAGTCTTCAGTACCTTTT 57.480 30.769 0.00 0.00 0.00 2.27
288 289 7.993183 TCTTCATTTCAAGTCTTCAGTACCTTT 59.007 33.333 0.00 0.00 0.00 3.11
289 290 7.442666 GTCTTCATTTCAAGTCTTCAGTACCTT 59.557 37.037 0.00 0.00 0.00 3.50
290 291 6.931840 GTCTTCATTTCAAGTCTTCAGTACCT 59.068 38.462 0.00 0.00 0.00 3.08
291 292 6.147985 GGTCTTCATTTCAAGTCTTCAGTACC 59.852 42.308 0.00 0.00 0.00 3.34
293 294 6.231211 GGGTCTTCATTTCAAGTCTTCAGTA 58.769 40.000 0.00 0.00 0.00 2.74
294 295 5.066593 GGGTCTTCATTTCAAGTCTTCAGT 58.933 41.667 0.00 0.00 0.00 3.41
296 297 4.065088 CGGGTCTTCATTTCAAGTCTTCA 58.935 43.478 0.00 0.00 0.00 3.02
297 298 4.315803 TCGGGTCTTCATTTCAAGTCTTC 58.684 43.478 0.00 0.00 0.00 2.87
298 299 4.351874 TCGGGTCTTCATTTCAAGTCTT 57.648 40.909 0.00 0.00 0.00 3.01
300 301 3.813166 TGTTCGGGTCTTCATTTCAAGTC 59.187 43.478 0.00 0.00 0.00 3.01
301 302 3.815809 TGTTCGGGTCTTCATTTCAAGT 58.184 40.909 0.00 0.00 0.00 3.16
304 305 4.141287 ACATTGTTCGGGTCTTCATTTCA 58.859 39.130 0.00 0.00 0.00 2.69
305 306 4.766404 ACATTGTTCGGGTCTTCATTTC 57.234 40.909 0.00 0.00 0.00 2.17
306 307 5.288804 CAAACATTGTTCGGGTCTTCATTT 58.711 37.500 1.83 0.00 0.00 2.32
307 308 4.795962 GCAAACATTGTTCGGGTCTTCATT 60.796 41.667 1.83 0.00 0.00 2.57
308 309 3.305335 GCAAACATTGTTCGGGTCTTCAT 60.305 43.478 1.83 0.00 0.00 2.57
309 310 2.034053 GCAAACATTGTTCGGGTCTTCA 59.966 45.455 1.83 0.00 0.00 3.02
310 311 2.661594 GCAAACATTGTTCGGGTCTTC 58.338 47.619 1.83 0.00 0.00 2.87
311 312 1.001815 CGCAAACATTGTTCGGGTCTT 60.002 47.619 1.83 0.00 0.00 3.01
312 313 0.591170 CGCAAACATTGTTCGGGTCT 59.409 50.000 1.83 0.00 0.00 3.85
313 314 0.386731 CCGCAAACATTGTTCGGGTC 60.387 55.000 17.51 0.99 36.73 4.46
314 315 0.820074 TCCGCAAACATTGTTCGGGT 60.820 50.000 22.27 0.00 40.42 5.28
315 316 0.525761 ATCCGCAAACATTGTTCGGG 59.474 50.000 22.27 12.23 40.42 5.14
316 317 1.468520 AGATCCGCAAACATTGTTCGG 59.531 47.619 18.66 18.66 41.30 4.30
317 318 2.900122 AGATCCGCAAACATTGTTCG 57.100 45.000 1.83 3.23 0.00 3.95
318 319 6.073548 CCTCTATAGATCCGCAAACATTGTTC 60.074 42.308 2.11 0.00 0.00 3.18
319 320 5.760253 CCTCTATAGATCCGCAAACATTGTT 59.240 40.000 2.11 0.00 0.00 2.83
320 321 5.300752 CCTCTATAGATCCGCAAACATTGT 58.699 41.667 2.11 0.00 0.00 2.71
321 322 4.692625 CCCTCTATAGATCCGCAAACATTG 59.307 45.833 2.11 0.00 0.00 2.82
322 323 4.804261 GCCCTCTATAGATCCGCAAACATT 60.804 45.833 2.11 0.00 0.00 2.71
323 324 3.307059 GCCCTCTATAGATCCGCAAACAT 60.307 47.826 2.11 0.00 0.00 2.71
325 326 2.613223 GGCCCTCTATAGATCCGCAAAC 60.613 54.545 2.11 0.00 0.00 2.93
326 327 1.623811 GGCCCTCTATAGATCCGCAAA 59.376 52.381 2.11 0.00 0.00 3.68
328 329 0.114364 TGGCCCTCTATAGATCCGCA 59.886 55.000 2.11 0.00 0.00 5.69
329 330 0.820871 CTGGCCCTCTATAGATCCGC 59.179 60.000 2.11 5.22 0.00 5.54
331 332 4.343814 GCTAATCTGGCCCTCTATAGATCC 59.656 50.000 2.11 5.97 0.00 3.36
332 333 4.343814 GGCTAATCTGGCCCTCTATAGATC 59.656 50.000 2.11 0.00 43.49 2.75
333 334 4.294347 GGCTAATCTGGCCCTCTATAGAT 58.706 47.826 2.11 0.00 43.49 1.98
334 335 3.714144 GGCTAATCTGGCCCTCTATAGA 58.286 50.000 0.00 1.69 43.49 1.98
344 345 2.707902 CGAAAGGGGCTAATCTGGC 58.292 57.895 0.00 0.00 0.00 4.85
378 379 2.639839 AGTTTCTTCCTGCCTTAGAGCA 59.360 45.455 0.00 0.00 41.46 4.26
380 381 5.049129 CACAAAGTTTCTTCCTGCCTTAGAG 60.049 44.000 0.00 0.00 0.00 2.43
381 382 4.821805 CACAAAGTTTCTTCCTGCCTTAGA 59.178 41.667 0.00 0.00 0.00 2.10
383 384 3.888930 CCACAAAGTTTCTTCCTGCCTTA 59.111 43.478 0.00 0.00 0.00 2.69
385 386 2.091885 TCCACAAAGTTTCTTCCTGCCT 60.092 45.455 0.00 0.00 0.00 4.75
386 387 2.306847 TCCACAAAGTTTCTTCCTGCC 58.693 47.619 0.00 0.00 0.00 4.85
388 389 4.022849 GTCCATCCACAAAGTTTCTTCCTG 60.023 45.833 0.00 0.00 0.00 3.86
389 390 4.145052 GTCCATCCACAAAGTTTCTTCCT 58.855 43.478 0.00 0.00 0.00 3.36
390 391 3.058224 CGTCCATCCACAAAGTTTCTTCC 60.058 47.826 0.00 0.00 0.00 3.46
391 392 3.058224 CCGTCCATCCACAAAGTTTCTTC 60.058 47.826 0.00 0.00 0.00 2.87
395 396 1.953686 CACCGTCCATCCACAAAGTTT 59.046 47.619 0.00 0.00 0.00 2.66
397 398 0.250727 CCACCGTCCATCCACAAAGT 60.251 55.000 0.00 0.00 0.00 2.66
398 399 0.960364 CCCACCGTCCATCCACAAAG 60.960 60.000 0.00 0.00 0.00 2.77
400 401 2.753701 CCCACCGTCCATCCACAA 59.246 61.111 0.00 0.00 0.00 3.33
401 402 3.326578 CCCCACCGTCCATCCACA 61.327 66.667 0.00 0.00 0.00 4.17
402 403 4.796495 GCCCCACCGTCCATCCAC 62.796 72.222 0.00 0.00 0.00 4.02
457 458 4.421515 CTCCCAGGGGCACTGCTG 62.422 72.222 12.38 4.55 46.14 4.41
458 459 4.990910 ACTCCCAGGGGCACTGCT 62.991 66.667 12.38 0.00 46.14 4.24
461 462 2.539081 GGAAACTCCCAGGGGCACT 61.539 63.158 5.33 0.00 34.68 4.40
462 463 2.035783 GGAAACTCCCAGGGGCAC 59.964 66.667 5.33 0.00 34.68 5.01
469 470 0.850100 TTGCTTCCTGGAAACTCCCA 59.150 50.000 10.86 0.64 35.03 4.37
471 472 1.248486 GGTTGCTTCCTGGAAACTCC 58.752 55.000 10.86 9.20 36.96 3.85
473 474 2.519013 GATGGTTGCTTCCTGGAAACT 58.481 47.619 10.86 0.00 34.59 2.66
474 475 1.200020 CGATGGTTGCTTCCTGGAAAC 59.800 52.381 10.86 6.74 34.05 2.78
477 478 1.377202 GCGATGGTTGCTTCCTGGA 60.377 57.895 0.00 0.00 0.00 3.86
478 479 2.409870 GGCGATGGTTGCTTCCTGG 61.410 63.158 0.00 0.00 0.00 4.45
479 480 2.409870 GGGCGATGGTTGCTTCCTG 61.410 63.158 0.00 0.00 0.00 3.86
480 481 2.044946 GGGCGATGGTTGCTTCCT 60.045 61.111 0.00 0.00 0.00 3.36
482 483 3.508840 CGGGGCGATGGTTGCTTC 61.509 66.667 0.00 0.00 0.00 3.86
486 487 3.369400 TTTGCGGGGCGATGGTTG 61.369 61.111 0.00 0.00 0.00 3.77
490 491 4.114997 GTGGTTTGCGGGGCGATG 62.115 66.667 0.00 0.00 0.00 3.84
496 497 3.656045 GTGGTCGTGGTTTGCGGG 61.656 66.667 0.00 0.00 0.00 6.13
498 499 0.591236 CTTTGTGGTCGTGGTTTGCG 60.591 55.000 0.00 0.00 0.00 4.85
499 500 0.869880 GCTTTGTGGTCGTGGTTTGC 60.870 55.000 0.00 0.00 0.00 3.68
500 501 0.248866 GGCTTTGTGGTCGTGGTTTG 60.249 55.000 0.00 0.00 0.00 2.93
501 502 1.720694 CGGCTTTGTGGTCGTGGTTT 61.721 55.000 0.00 0.00 0.00 3.27
504 505 3.353836 CCGGCTTTGTGGTCGTGG 61.354 66.667 0.00 0.00 31.91 4.94
505 506 2.113131 GAACCGGCTTTGTGGTCGTG 62.113 60.000 0.00 0.00 37.54 4.35
506 507 1.890510 GAACCGGCTTTGTGGTCGT 60.891 57.895 0.00 0.00 37.54 4.34
507 508 1.440938 TTGAACCGGCTTTGTGGTCG 61.441 55.000 0.00 0.00 37.54 4.79
508 509 0.030235 GTTGAACCGGCTTTGTGGTC 59.970 55.000 0.00 0.00 37.54 4.02
510 511 1.008995 CGTTGAACCGGCTTTGTGG 60.009 57.895 0.00 0.00 0.00 4.17
512 513 3.427670 CCGTTGAACCGGCTTTGT 58.572 55.556 0.00 0.00 41.78 2.83
519 520 1.278637 GTGTCAAGCCGTTGAACCG 59.721 57.895 0.00 0.00 44.44 4.44
521 522 0.028902 GGTGTGTCAAGCCGTTGAAC 59.971 55.000 0.00 0.00 44.44 3.18
522 523 0.393132 TGGTGTGTCAAGCCGTTGAA 60.393 50.000 0.00 0.00 44.44 2.69
523 524 1.092921 GTGGTGTGTCAAGCCGTTGA 61.093 55.000 0.00 0.00 40.55 3.18
524 525 1.355210 GTGGTGTGTCAAGCCGTTG 59.645 57.895 0.00 0.00 34.67 4.10
525 526 2.177580 CGTGGTGTGTCAAGCCGTT 61.178 57.895 0.00 0.00 0.00 4.44
526 527 2.587753 CGTGGTGTGTCAAGCCGT 60.588 61.111 0.00 0.00 0.00 5.68
527 528 3.345808 CCGTGGTGTGTCAAGCCG 61.346 66.667 0.00 0.00 0.00 5.52
528 529 3.660111 GCCGTGGTGTGTCAAGCC 61.660 66.667 0.00 0.00 0.00 4.35
529 530 4.012895 CGCCGTGGTGTGTCAAGC 62.013 66.667 0.00 0.00 0.00 4.01
530 531 4.012895 GCGCCGTGGTGTGTCAAG 62.013 66.667 0.00 0.00 0.00 3.02
531 532 4.840005 TGCGCCGTGGTGTGTCAA 62.840 61.111 4.18 0.00 0.00 3.18
546 547 2.102553 GAGAGGTAGCGTCCGTGC 59.897 66.667 0.00 0.00 0.00 5.34
548 549 1.451747 GAGGAGAGGTAGCGTCCGT 60.452 63.158 9.82 1.13 35.33 4.69
549 550 1.451567 TGAGGAGAGGTAGCGTCCG 60.452 63.158 9.82 0.00 35.33 4.79
550 551 0.394625 AGTGAGGAGAGGTAGCGTCC 60.395 60.000 7.99 7.99 0.00 4.79
551 552 0.736053 CAGTGAGGAGAGGTAGCGTC 59.264 60.000 0.00 0.00 0.00 5.19
552 553 0.038455 ACAGTGAGGAGAGGTAGCGT 59.962 55.000 0.00 0.00 0.00 5.07
553 554 0.736053 GACAGTGAGGAGAGGTAGCG 59.264 60.000 0.00 0.00 0.00 4.26
557 558 2.336478 CGCGACAGTGAGGAGAGGT 61.336 63.158 0.00 0.00 0.00 3.85
559 560 2.202544 GCGCGACAGTGAGGAGAG 60.203 66.667 12.10 0.00 0.00 3.20
560 561 4.103103 CGCGCGACAGTGAGGAGA 62.103 66.667 28.94 0.00 0.00 3.71
608 609 3.777925 CTCTGGCGCCGTTTGACG 61.778 66.667 23.90 3.75 42.11 4.35
609 610 3.423154 CCTCTGGCGCCGTTTGAC 61.423 66.667 23.90 0.00 0.00 3.18
610 611 3.876589 GACCTCTGGCGCCGTTTGA 62.877 63.158 23.90 15.72 0.00 2.69
611 612 3.423154 GACCTCTGGCGCCGTTTG 61.423 66.667 23.90 13.14 0.00 2.93
612 613 3.883744 CTGACCTCTGGCGCCGTTT 62.884 63.158 23.90 3.38 0.00 3.60
613 614 4.379243 CTGACCTCTGGCGCCGTT 62.379 66.667 23.90 2.94 0.00 4.44
625 626 0.908198 AGTGAGATTGGAGGCTGACC 59.092 55.000 0.00 0.00 0.00 4.02
626 627 1.830477 AGAGTGAGATTGGAGGCTGAC 59.170 52.381 0.00 0.00 0.00 3.51
627 628 2.106566 GAGAGTGAGATTGGAGGCTGA 58.893 52.381 0.00 0.00 0.00 4.26
628 629 2.101249 GAGAGAGTGAGATTGGAGGCTG 59.899 54.545 0.00 0.00 0.00 4.85
629 630 2.387757 GAGAGAGTGAGATTGGAGGCT 58.612 52.381 0.00 0.00 0.00 4.58
630 631 1.066908 CGAGAGAGTGAGATTGGAGGC 59.933 57.143 0.00 0.00 0.00 4.70
631 632 1.066908 GCGAGAGAGTGAGATTGGAGG 59.933 57.143 0.00 0.00 0.00 4.30
632 633 1.066908 GGCGAGAGAGTGAGATTGGAG 59.933 57.143 0.00 0.00 0.00 3.86
633 634 1.107114 GGCGAGAGAGTGAGATTGGA 58.893 55.000 0.00 0.00 0.00 3.53
634 635 0.103937 GGGCGAGAGAGTGAGATTGG 59.896 60.000 0.00 0.00 0.00 3.16
635 636 0.103937 GGGGCGAGAGAGTGAGATTG 59.896 60.000 0.00 0.00 0.00 2.67
636 637 1.388065 CGGGGCGAGAGAGTGAGATT 61.388 60.000 0.00 0.00 0.00 2.40
637 638 1.826054 CGGGGCGAGAGAGTGAGAT 60.826 63.158 0.00 0.00 0.00 2.75
638 639 2.438614 CGGGGCGAGAGAGTGAGA 60.439 66.667 0.00 0.00 0.00 3.27
639 640 3.522731 CCGGGGCGAGAGAGTGAG 61.523 72.222 0.00 0.00 0.00 3.51
652 653 3.330720 GATATGGGGGAGGCCGGG 61.331 72.222 2.18 0.00 0.00 5.73
653 654 2.203998 AGATATGGGGGAGGCCGG 60.204 66.667 0.00 0.00 0.00 6.13
654 655 3.072476 CAGATATGGGGGAGGCCG 58.928 66.667 0.00 0.00 0.00 6.13
655 656 1.846712 GAGCAGATATGGGGGAGGCC 61.847 65.000 0.00 0.00 0.00 5.19
656 657 0.839853 AGAGCAGATATGGGGGAGGC 60.840 60.000 0.00 0.00 0.00 4.70
657 658 1.274712 GAGAGCAGATATGGGGGAGG 58.725 60.000 0.00 0.00 0.00 4.30
658 659 0.894141 CGAGAGCAGATATGGGGGAG 59.106 60.000 0.00 0.00 0.00 4.30
659 660 3.057749 CGAGAGCAGATATGGGGGA 57.942 57.895 0.00 0.00 0.00 4.81
672 673 0.994995 CGACACAAAGGATGCGAGAG 59.005 55.000 0.00 0.00 0.00 3.20
673 674 0.317160 ACGACACAAAGGATGCGAGA 59.683 50.000 0.00 0.00 0.00 4.04
674 675 0.439985 CACGACACAAAGGATGCGAG 59.560 55.000 0.00 0.00 0.00 5.03
675 676 0.948623 CCACGACACAAAGGATGCGA 60.949 55.000 0.00 0.00 0.00 5.10
676 677 1.497278 CCACGACACAAAGGATGCG 59.503 57.895 0.00 0.00 0.00 4.73
677 678 1.210155 GCCACGACACAAAGGATGC 59.790 57.895 0.00 0.00 0.00 3.91
678 679 1.497278 CGCCACGACACAAAGGATG 59.503 57.895 0.00 0.00 0.00 3.51
679 680 1.671054 CCGCCACGACACAAAGGAT 60.671 57.895 0.00 0.00 0.00 3.24
680 681 2.280524 CCGCCACGACACAAAGGA 60.281 61.111 0.00 0.00 0.00 3.36
681 682 4.025401 GCCGCCACGACACAAAGG 62.025 66.667 0.00 0.00 0.00 3.11
682 683 3.240606 CTGCCGCCACGACACAAAG 62.241 63.158 0.00 0.00 0.00 2.77
683 684 3.276091 CTGCCGCCACGACACAAA 61.276 61.111 0.00 0.00 0.00 2.83
713 714 3.326889 TAAACTCCGGTCGCCGTCG 62.327 63.158 15.38 9.16 46.80 5.12
714 715 1.515736 CTAAACTCCGGTCGCCGTC 60.516 63.158 15.38 0.00 46.80 4.79
715 716 2.570181 CTAAACTCCGGTCGCCGT 59.430 61.111 15.38 1.61 46.80 5.68
717 718 2.186125 CCCTAAACTCCGGTCGCC 59.814 66.667 0.00 0.00 0.00 5.54
718 719 2.510918 GCCCTAAACTCCGGTCGC 60.511 66.667 0.00 0.00 0.00 5.19
719 720 2.202703 CGCCCTAAACTCCGGTCG 60.203 66.667 0.00 0.00 0.00 4.79
720 721 2.510918 GCGCCCTAAACTCCGGTC 60.511 66.667 0.00 0.00 0.00 4.79
721 722 3.001406 AGCGCCCTAAACTCCGGT 61.001 61.111 2.29 0.00 0.00 5.28
722 723 2.511600 CAGCGCCCTAAACTCCGG 60.512 66.667 2.29 0.00 0.00 5.14
723 724 3.195698 GCAGCGCCCTAAACTCCG 61.196 66.667 2.29 0.00 0.00 4.63
724 725 3.195698 CGCAGCGCCCTAAACTCC 61.196 66.667 2.29 0.00 0.00 3.85
725 726 3.195698 CCGCAGCGCCCTAAACTC 61.196 66.667 10.07 0.00 0.00 3.01
774 775 1.128507 CTCGCACACACGCAAACATAT 59.871 47.619 0.00 0.00 0.00 1.78
775 776 0.510790 CTCGCACACACGCAAACATA 59.489 50.000 0.00 0.00 0.00 2.29
793 794 2.514592 ACACACAGCAAGCACGCT 60.515 55.556 0.00 0.00 45.21 5.07
811 812 1.523934 GCACAAATTCAAGCACACAGC 59.476 47.619 0.00 0.00 46.19 4.40
812 813 2.792674 CAGCACAAATTCAAGCACACAG 59.207 45.455 0.00 0.00 0.00 3.66
813 814 2.811855 CAGCACAAATTCAAGCACACA 58.188 42.857 0.00 0.00 0.00 3.72
814 815 1.523934 GCAGCACAAATTCAAGCACAC 59.476 47.619 0.00 0.00 0.00 3.82
815 816 1.538634 GGCAGCACAAATTCAAGCACA 60.539 47.619 0.00 0.00 0.00 4.57
897 898 1.425428 GCAAGGTCATAGCACGCAC 59.575 57.895 0.00 0.00 0.00 5.34
909 915 2.902705 TGAGTACAAAGACGCAAGGT 57.097 45.000 0.00 0.00 46.39 3.50
920 926 5.239744 GCGGAGATAGAAGAGATGAGTACAA 59.760 44.000 0.00 0.00 0.00 2.41
932 938 2.100584 ACTTCTGCAGCGGAGATAGAAG 59.899 50.000 9.47 13.73 46.00 2.85
933 939 2.103373 ACTTCTGCAGCGGAGATAGAA 58.897 47.619 9.47 0.00 0.00 2.10
935 941 2.593346 AACTTCTGCAGCGGAGATAG 57.407 50.000 9.47 1.82 0.00 2.08
936 942 2.233676 TGAAACTTCTGCAGCGGAGATA 59.766 45.455 9.47 0.00 0.00 1.98
995 1001 4.349503 TCCACAGCGCCATGGCTT 62.350 61.111 33.07 19.12 42.53 4.35
1072 1109 3.196463 CAGACTGCAAGATCATGGAGAC 58.804 50.000 23.79 17.93 40.84 3.36
1084 1121 2.027073 CCGTAAGCGCAGACTGCAA 61.027 57.895 26.32 6.48 45.36 4.08
1098 1135 2.093869 ACTCTTATTTTGCCGAGCCGTA 60.094 45.455 0.00 0.00 0.00 4.02
1110 1147 3.257393 CTGCTCGCACTCACTCTTATTT 58.743 45.455 0.00 0.00 0.00 1.40
1113 1150 0.109086 GCTGCTCGCACTCACTCTTA 60.109 55.000 0.00 0.00 38.92 2.10
1115 1152 2.211619 GAGCTGCTCGCACTCACTCT 62.212 60.000 14.68 0.00 42.61 3.24
1117 1154 2.261052 GAGCTGCTCGCACTCACT 59.739 61.111 14.68 0.00 42.61 3.41
1118 1155 3.177920 CGAGCTGCTCGCACTCAC 61.178 66.667 35.11 4.89 46.75 3.51
1173 1214 4.025858 GCCTCTGGCTCCTGCACA 62.026 66.667 0.73 0.00 46.69 4.57
1212 1253 2.138831 GTCCCGGAGTGTATCCCCC 61.139 68.421 0.73 0.00 46.50 5.40
1236 1278 0.884704 GGCAGGACAAAACGAGCTCA 60.885 55.000 15.40 0.00 0.00 4.26
1245 1287 1.065410 TCCTTCCCTGGCAGGACAAA 61.065 55.000 34.84 22.17 37.67 2.83
1446 1501 0.179045 ATACCTGCCGATGTGGAAGC 60.179 55.000 0.00 0.00 43.02 3.86
1498 1578 5.758296 ACCGTTCATGACCAACATACATATC 59.242 40.000 0.00 0.00 37.46 1.63
1499 1579 5.680619 ACCGTTCATGACCAACATACATAT 58.319 37.500 0.00 0.00 37.46 1.78
1500 1580 5.092554 ACCGTTCATGACCAACATACATA 57.907 39.130 0.00 0.00 37.46 2.29
1585 2470 1.243342 TTCCTGGGTTTCATGCAGCG 61.243 55.000 0.00 0.00 0.00 5.18
1690 2900 3.204827 CATCCGAAAGCCTGCCCG 61.205 66.667 0.00 0.00 0.00 6.13
1702 2912 4.227134 CCACCTCTCGCCCATCCG 62.227 72.222 0.00 0.00 0.00 4.18
1737 2947 1.663388 CAGCGCGCCGATGGTTATA 60.663 57.895 30.33 0.00 39.68 0.98
1765 2978 1.271054 GGATGTTGAGCTCTGTGTGGT 60.271 52.381 16.19 0.00 0.00 4.16
1767 2980 2.469274 AGGATGTTGAGCTCTGTGTG 57.531 50.000 16.19 0.00 0.00 3.82
1779 2992 1.496060 TGGAGCCGTGATAGGATGTT 58.504 50.000 0.00 0.00 0.00 2.71
1835 3048 3.056107 GGTGCTTGTCCATACTCACAGTA 60.056 47.826 0.00 0.00 34.82 2.74
1898 3113 0.976073 CCGGCTCCTTTCTCCACCTA 60.976 60.000 0.00 0.00 0.00 3.08
1924 3148 5.014858 ACTCGTAGACAATAAACCTCTCCA 58.985 41.667 0.00 0.00 0.00 3.86
1925 3149 5.579564 ACTCGTAGACAATAAACCTCTCC 57.420 43.478 0.00 0.00 0.00 3.71
1934 3176 7.255486 CCATTCTCCATGTACTCGTAGACAATA 60.255 40.741 0.00 0.00 0.00 1.90
1998 3240 4.421479 CGGCGACAGCGAAGAGGT 62.421 66.667 0.00 0.00 46.35 3.85
2039 3281 1.884926 GCAGAGTAGCACATCGGCC 60.885 63.158 0.00 0.00 31.48 6.13
2060 3302 1.501741 GTGTTCAATGGCGCGTGAT 59.498 52.632 8.43 0.00 0.00 3.06
2075 3317 1.055849 TGGCATGACAGTGTAGGTGT 58.944 50.000 0.00 0.00 0.00 4.16
2138 3380 0.727398 GCACCCAACTAGCATCGAAC 59.273 55.000 0.00 0.00 0.00 3.95
2178 3420 0.669077 ATGTCCCAGACGATAGACGC 59.331 55.000 0.00 0.00 46.94 5.19
2183 3425 0.753848 TCGCCATGTCCCAGACGATA 60.754 55.000 0.00 0.00 34.95 2.92
2184 3426 2.021068 CTCGCCATGTCCCAGACGAT 62.021 60.000 0.00 0.00 34.95 3.73
2213 3455 2.028112 TGCAACGCTTAGAGTCATTCCT 60.028 45.455 0.00 0.00 0.00 3.36
2221 3463 0.950555 TGTGCCTGCAACGCTTAGAG 60.951 55.000 6.95 0.00 0.00 2.43
2225 3467 2.120909 AAGTGTGCCTGCAACGCTT 61.121 52.632 9.49 9.49 0.00 4.68
2227 3469 2.353839 CAAGTGTGCCTGCAACGC 60.354 61.111 0.00 0.00 0.00 4.84
2271 3516 0.449388 GCCGGCTTCAGAAGACAATG 59.551 55.000 22.15 4.94 35.79 2.82
2312 3557 0.326264 GAACCTCCAGCATCACCACT 59.674 55.000 0.00 0.00 0.00 4.00
2324 3569 4.580868 CCTCTTTTCCTGTTAGAACCTCC 58.419 47.826 0.00 0.00 0.00 4.30
2339 3584 4.026052 CCCCTTGTGATAATGCCTCTTTT 58.974 43.478 0.00 0.00 0.00 2.27
2343 3588 3.515602 ATCCCCTTGTGATAATGCCTC 57.484 47.619 0.00 0.00 0.00 4.70
2351 3596 6.334296 TCTCATCCTATAATCCCCTTGTGAT 58.666 40.000 0.00 0.00 0.00 3.06
2354 3599 4.534103 GCTCTCATCCTATAATCCCCTTGT 59.466 45.833 0.00 0.00 0.00 3.16
2364 3609 3.517100 GCCAATCCTGCTCTCATCCTATA 59.483 47.826 0.00 0.00 0.00 1.31
2399 3653 2.543777 TACCTGCCTCGATTATTGGC 57.456 50.000 5.71 5.71 46.26 4.52
2402 3656 6.263168 CCTCAAATTTACCTGCCTCGATTATT 59.737 38.462 0.00 0.00 0.00 1.40
2420 3674 3.620966 GCCTGTCTAGCAACTCCTCAAAT 60.621 47.826 0.00 0.00 0.00 2.32
2495 3749 2.480037 CACACAACATCGTGCAGTATGT 59.520 45.455 7.82 7.82 40.73 2.29
2498 3752 2.517650 TCACACAACATCGTGCAGTA 57.482 45.000 0.00 0.00 40.73 2.74
2546 3800 0.517316 GGTTTGCCACGATGTCTGAC 59.483 55.000 0.00 0.00 34.09 3.51
2646 3936 2.380084 TTTTAGCTTGCCGACGAGAT 57.620 45.000 0.00 0.00 0.00 2.75
2651 3941 3.569250 TTGGAATTTTAGCTTGCCGAC 57.431 42.857 0.00 0.00 0.00 4.79
2663 3953 4.839121 TGTAGCGTACCAGATTGGAATTT 58.161 39.130 1.40 0.00 40.96 1.82
2670 3960 4.021368 AGTGAGTTTGTAGCGTACCAGATT 60.021 41.667 0.00 0.00 0.00 2.40
2680 3970 4.877282 AGAGAGTTCAGTGAGTTTGTAGC 58.123 43.478 0.00 0.00 0.00 3.58
2704 3999 7.538678 ACAAACAAGATTGAATTCGCTAATGTC 59.461 33.333 0.04 0.00 34.38 3.06
2711 4006 7.325821 TCAATGTACAAACAAGATTGAATTCGC 59.674 33.333 0.00 0.00 39.58 4.70
2712 4007 8.726650 TCAATGTACAAACAAGATTGAATTCG 57.273 30.769 0.00 0.00 39.58 3.34
2723 4018 5.009631 CCCTCCTCATCAATGTACAAACAA 58.990 41.667 0.00 0.00 39.58 2.83
2728 4025 2.435805 GAGCCCTCCTCATCAATGTACA 59.564 50.000 0.00 0.00 40.45 2.90
2741 4038 3.636153 AAAATGAGTAGTGAGCCCTCC 57.364 47.619 0.00 0.00 0.00 4.30
2842 4140 2.360350 CCCGGTCAGTGCAATGCT 60.360 61.111 9.79 0.00 0.00 3.79
2885 4183 4.641645 CTTCACAGCCACCCGCCA 62.642 66.667 0.00 0.00 38.78 5.69
2923 4221 3.955650 ACGTGCAGTAGTAACAGGATT 57.044 42.857 0.00 0.00 0.00 3.01
2961 4259 1.296145 CAAGCGCGTGCAGATTACG 60.296 57.895 24.79 0.00 46.23 3.18
3011 4309 7.595819 AAATGAAACTACAGTGGGATTTCAA 57.404 32.000 16.84 6.18 41.27 2.69
3014 4312 6.041979 AGCAAAATGAAACTACAGTGGGATTT 59.958 34.615 0.00 0.00 0.00 2.17
3016 4314 5.079643 AGCAAAATGAAACTACAGTGGGAT 58.920 37.500 0.00 0.00 0.00 3.85
3060 4360 6.071221 TCCTATGTAACCGCTTAGAAGAACAA 60.071 38.462 0.00 0.00 0.00 2.83
3078 4380 4.218417 GCATGTTGTGTTCCTTTCCTATGT 59.782 41.667 0.00 0.00 0.00 2.29
3080 4382 3.440173 CGCATGTTGTGTTCCTTTCCTAT 59.560 43.478 0.00 0.00 0.00 2.57
3106 4408 6.213600 AGAAACTATGTAGAGTGGTGACCATT 59.786 38.462 7.94 2.36 35.28 3.16
3143 4445 9.104965 GGCTAAAAACCAAAGTAATTTCAAAGT 57.895 29.630 0.00 0.00 0.00 2.66
3145 4447 9.103861 CAGGCTAAAAACCAAAGTAATTTCAAA 57.896 29.630 0.00 0.00 0.00 2.69
3146 4448 7.713073 CCAGGCTAAAAACCAAAGTAATTTCAA 59.287 33.333 0.00 0.00 0.00 2.69
3147 4449 7.070074 TCCAGGCTAAAAACCAAAGTAATTTCA 59.930 33.333 0.00 0.00 0.00 2.69
3148 4450 7.438564 TCCAGGCTAAAAACCAAAGTAATTTC 58.561 34.615 0.00 0.00 0.00 2.17
3149 4451 7.070696 ACTCCAGGCTAAAAACCAAAGTAATTT 59.929 33.333 0.00 0.00 0.00 1.82
3180 4482 5.686753 ACATACAAAGTGGACCTGTTGTTA 58.313 37.500 11.58 2.33 35.82 2.41
3232 4549 0.032017 ATTGGACGGAGCCTCCTACT 60.032 55.000 9.52 0.00 33.30 2.57
3242 5897 5.278315 CGAGATAACACAGATATTGGACGGA 60.278 44.000 0.00 0.00 0.00 4.69
3276 5931 3.873952 CCGAAAAGGAGCTGGATTTAGAG 59.126 47.826 0.00 0.00 45.00 2.43
3277 5932 3.263425 ACCGAAAAGGAGCTGGATTTAGA 59.737 43.478 0.00 0.00 45.00 2.10
3278 5933 3.610911 ACCGAAAAGGAGCTGGATTTAG 58.389 45.455 0.00 0.00 45.00 1.85
3280 5935 2.586648 ACCGAAAAGGAGCTGGATTT 57.413 45.000 0.00 0.00 45.00 2.17
3281 5936 2.586648 AACCGAAAAGGAGCTGGATT 57.413 45.000 0.00 0.00 45.00 3.01
3282 5937 2.586648 AAACCGAAAAGGAGCTGGAT 57.413 45.000 0.00 0.00 45.00 3.41
3283 5938 3.008594 TCATAAACCGAAAAGGAGCTGGA 59.991 43.478 0.00 0.00 45.00 3.86
3284 5939 3.343617 TCATAAACCGAAAAGGAGCTGG 58.656 45.455 0.00 0.00 45.00 4.85
3285 5940 3.375299 CCTCATAAACCGAAAAGGAGCTG 59.625 47.826 0.00 0.00 45.00 4.24
3286 5941 3.610911 CCTCATAAACCGAAAAGGAGCT 58.389 45.455 0.00 0.00 45.00 4.09
3287 5942 2.097629 GCCTCATAAACCGAAAAGGAGC 59.902 50.000 0.00 0.00 45.00 4.70
3288 5943 3.610911 AGCCTCATAAACCGAAAAGGAG 58.389 45.455 0.00 0.00 45.00 3.69
3289 5944 3.713826 AGCCTCATAAACCGAAAAGGA 57.286 42.857 0.00 0.00 45.00 3.36
3291 5946 3.501950 GCAAGCCTCATAAACCGAAAAG 58.498 45.455 0.00 0.00 0.00 2.27
3308 5963 2.493713 AACCTAGAGATACGCGCAAG 57.506 50.000 5.73 0.00 43.44 4.01
3309 5964 2.953466 AAACCTAGAGATACGCGCAA 57.047 45.000 5.73 0.00 0.00 4.85
3311 5966 3.344904 TGTAAACCTAGAGATACGCGC 57.655 47.619 5.73 0.00 0.00 6.86
3312 5967 6.636666 TTTTTGTAAACCTAGAGATACGCG 57.363 37.500 3.53 3.53 0.00 6.01
3336 5991 9.386010 TGATATATAACTTGCTTTACGTTGGTT 57.614 29.630 0.00 0.00 0.00 3.67
3337 5992 8.823818 GTGATATATAACTTGCTTTACGTTGGT 58.176 33.333 0.00 0.00 0.00 3.67
3338 5993 8.002107 CGTGATATATAACTTGCTTTACGTTGG 58.998 37.037 0.00 0.00 0.00 3.77
3340 5995 8.861033 TCGTGATATATAACTTGCTTTACGTT 57.139 30.769 0.00 0.00 0.00 3.99
3341 5996 8.861033 TTCGTGATATATAACTTGCTTTACGT 57.139 30.769 0.00 0.00 0.00 3.57
3369 6024 8.750298 ACCGATCCGAAGTTTCTAATGATATAT 58.250 33.333 0.00 0.00 0.00 0.86
3370 6025 8.118976 ACCGATCCGAAGTTTCTAATGATATA 57.881 34.615 0.00 0.00 0.00 0.86
3371 6026 6.994221 ACCGATCCGAAGTTTCTAATGATAT 58.006 36.000 0.00 0.00 0.00 1.63
3372 6027 6.401047 ACCGATCCGAAGTTTCTAATGATA 57.599 37.500 0.00 0.00 0.00 2.15
3373 6028 5.277857 ACCGATCCGAAGTTTCTAATGAT 57.722 39.130 0.00 0.00 0.00 2.45
3375 6030 6.040878 AGTAACCGATCCGAAGTTTCTAATG 58.959 40.000 0.00 0.00 0.00 1.90
3376 6031 6.218108 AGTAACCGATCCGAAGTTTCTAAT 57.782 37.500 0.00 0.00 0.00 1.73
3377 6032 5.649782 AGTAACCGATCCGAAGTTTCTAA 57.350 39.130 0.00 0.00 0.00 2.10
3378 6033 5.649782 AAGTAACCGATCCGAAGTTTCTA 57.350 39.130 0.00 0.00 0.00 2.10
3379 6034 4.532314 AAGTAACCGATCCGAAGTTTCT 57.468 40.909 0.00 0.00 0.00 2.52
3380 6035 4.928020 AGAAAGTAACCGATCCGAAGTTTC 59.072 41.667 10.44 10.44 0.00 2.78
3381 6036 4.891260 AGAAAGTAACCGATCCGAAGTTT 58.109 39.130 0.00 0.00 0.00 2.66
3382 6037 4.532314 AGAAAGTAACCGATCCGAAGTT 57.468 40.909 0.00 0.00 0.00 2.66
3384 6039 5.035443 CACTAGAAAGTAACCGATCCGAAG 58.965 45.833 0.00 0.00 33.48 3.79
3387 6042 3.129988 ACCACTAGAAAGTAACCGATCCG 59.870 47.826 0.00 0.00 33.48 4.18
3388 6043 4.732672 ACCACTAGAAAGTAACCGATCC 57.267 45.455 0.00 0.00 33.48 3.36
3397 6117 8.657712 AGTCCAAAAACTATACCACTAGAAAGT 58.342 33.333 0.00 0.00 35.91 2.66
3418 6138 8.204160 CCAACATAAGATGAGTTGTATAGTCCA 58.796 37.037 0.00 0.00 40.64 4.02
3419 6139 8.204836 ACCAACATAAGATGAGTTGTATAGTCC 58.795 37.037 0.00 0.00 40.64 3.85
3420 6140 9.250624 GACCAACATAAGATGAGTTGTATAGTC 57.749 37.037 0.00 0.00 40.64 2.59
3421 6141 8.758829 TGACCAACATAAGATGAGTTGTATAGT 58.241 33.333 0.00 0.00 40.64 2.12
3422 6142 9.599866 TTGACCAACATAAGATGAGTTGTATAG 57.400 33.333 0.00 0.00 40.64 1.31
3423 6143 9.952030 TTTGACCAACATAAGATGAGTTGTATA 57.048 29.630 0.00 0.00 40.64 1.47
3424 6144 8.862325 TTTGACCAACATAAGATGAGTTGTAT 57.138 30.769 0.00 0.00 40.64 2.29
3425 6145 8.862325 ATTTGACCAACATAAGATGAGTTGTA 57.138 30.769 0.00 0.00 40.64 2.41
3445 6165 9.529325 GCACGCATACCTAGATATATAATTTGA 57.471 33.333 0.00 0.00 0.00 2.69
3446 6166 9.313118 TGCACGCATACCTAGATATATAATTTG 57.687 33.333 0.00 0.00 0.00 2.32
3447 6167 9.884636 TTGCACGCATACCTAGATATATAATTT 57.115 29.630 0.00 0.00 0.00 1.82
3448 6168 9.534565 CTTGCACGCATACCTAGATATATAATT 57.465 33.333 0.00 0.00 0.00 1.40
3450 6170 6.978659 GCTTGCACGCATACCTAGATATATAA 59.021 38.462 10.77 0.00 0.00 0.98
3453 6173 4.381612 GGCTTGCACGCATACCTAGATATA 60.382 45.833 17.72 0.00 0.00 0.86
3454 6174 3.589988 GCTTGCACGCATACCTAGATAT 58.410 45.455 10.77 0.00 0.00 1.63
3457 6177 0.179084 GGCTTGCACGCATACCTAGA 60.179 55.000 17.72 0.00 0.00 2.43
3458 6178 0.179073 AGGCTTGCACGCATACCTAG 60.179 55.000 17.72 0.00 32.17 3.02
3460 6180 0.251916 TAAGGCTTGCACGCATACCT 59.748 50.000 17.72 7.37 34.40 3.08
3463 6183 3.314080 GGTTTATAAGGCTTGCACGCATA 59.686 43.478 17.72 9.69 0.00 3.14
3464 6184 2.099098 GGTTTATAAGGCTTGCACGCAT 59.901 45.455 17.72 7.08 0.00 4.73
3465 6185 1.470890 GGTTTATAAGGCTTGCACGCA 59.529 47.619 17.72 0.00 0.00 5.24
3467 6187 1.063469 CCGGTTTATAAGGCTTGCACG 59.937 52.381 10.69 5.89 0.00 5.34
3468 6188 2.361789 TCCGGTTTATAAGGCTTGCAC 58.638 47.619 10.69 0.85 0.00 4.57
3469 6189 2.791347 TCCGGTTTATAAGGCTTGCA 57.209 45.000 10.69 0.00 0.00 4.08
3471 6191 5.221048 CCTCATTTCCGGTTTATAAGGCTTG 60.221 44.000 10.69 0.00 0.00 4.01
3472 6192 4.887655 CCTCATTTCCGGTTTATAAGGCTT 59.112 41.667 4.58 4.58 0.00 4.35
3473 6193 4.079958 ACCTCATTTCCGGTTTATAAGGCT 60.080 41.667 0.00 0.00 0.00 4.58
3474 6194 4.204799 ACCTCATTTCCGGTTTATAAGGC 58.795 43.478 0.00 0.00 0.00 4.35
3475 6195 6.589135 ACTACCTCATTTCCGGTTTATAAGG 58.411 40.000 0.00 5.69 34.76 2.69
3477 6197 8.537728 TCTACTACCTCATTTCCGGTTTATAA 57.462 34.615 0.00 0.00 34.76 0.98
3478 6198 8.537728 TTCTACTACCTCATTTCCGGTTTATA 57.462 34.615 0.00 0.00 34.76 0.98
3479 6199 7.427989 TTCTACTACCTCATTTCCGGTTTAT 57.572 36.000 0.00 0.00 34.76 1.40
3480 6200 6.855763 TTCTACTACCTCATTTCCGGTTTA 57.144 37.500 0.00 0.00 34.76 2.01
3482 6202 5.189145 ACATTCTACTACCTCATTTCCGGTT 59.811 40.000 0.00 0.00 34.76 4.44
3484 6204 5.277857 ACATTCTACTACCTCATTTCCGG 57.722 43.478 0.00 0.00 0.00 5.14
3485 6205 7.713750 TCTAACATTCTACTACCTCATTTCCG 58.286 38.462 0.00 0.00 0.00 4.30
3515 6610 9.680315 GCGTTATACTACAGATCTAAATCAAGT 57.320 33.333 0.00 0.00 34.07 3.16
3521 6616 6.040054 TGCCAGCGTTATACTACAGATCTAAA 59.960 38.462 0.00 0.00 0.00 1.85
3526 6621 3.637229 AGTGCCAGCGTTATACTACAGAT 59.363 43.478 0.00 0.00 0.00 2.90
3530 6625 4.628333 TCAAAAGTGCCAGCGTTATACTAC 59.372 41.667 0.00 0.00 0.00 2.73
3532 6627 3.670625 TCAAAAGTGCCAGCGTTATACT 58.329 40.909 0.00 0.00 0.00 2.12
3533 6628 4.142687 ACATCAAAAGTGCCAGCGTTATAC 60.143 41.667 0.00 0.00 0.00 1.47
3539 6634 1.001487 TCAACATCAAAAGTGCCAGCG 60.001 47.619 0.00 0.00 0.00 5.18
3541 6636 4.311816 AGTTCAACATCAAAAGTGCCAG 57.688 40.909 0.00 0.00 0.00 4.85
3555 6650 4.319549 CGTTCTTTTCCAGGCTAGTTCAAC 60.320 45.833 0.00 0.00 0.00 3.18
3557 6652 3.070446 TCGTTCTTTTCCAGGCTAGTTCA 59.930 43.478 0.00 0.00 0.00 3.18
3562 6657 2.569853 TCCATCGTTCTTTTCCAGGCTA 59.430 45.455 0.00 0.00 0.00 3.93
3574 6669 7.564988 GTTAACAGCATAGTAATCCATCGTTC 58.435 38.462 0.00 0.00 0.00 3.95
3576 6671 5.690409 CGTTAACAGCATAGTAATCCATCGT 59.310 40.000 6.39 0.00 0.00 3.73
3577 6672 5.118664 CCGTTAACAGCATAGTAATCCATCG 59.881 44.000 6.39 0.00 0.00 3.84
3580 6675 4.443739 CCCCGTTAACAGCATAGTAATCCA 60.444 45.833 6.39 0.00 0.00 3.41
3587 6682 3.864243 TGTTACCCCGTTAACAGCATAG 58.136 45.455 6.39 0.00 32.96 2.23
3602 6697 2.749076 TGCTGCATCAATCACTGTTACC 59.251 45.455 0.00 0.00 0.00 2.85
3606 6701 1.749063 CCATGCTGCATCAATCACTGT 59.251 47.619 13.10 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.