Multiple sequence alignment - TraesCS2A01G023700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G023700 chr2A 100.000 4031 0 0 1 4031 11619324 11623354 0.000000e+00 7444.0
1 TraesCS2A01G023700 chr2A 72.816 515 95 33 1871 2360 11915670 11915176 2.530000e-27 134.0
2 TraesCS2A01G023700 chr2D 89.925 2134 159 16 1 2105 10914163 10916269 0.000000e+00 2699.0
3 TraesCS2A01G023700 chr2D 92.730 1238 65 13 2144 3380 10916262 10917475 0.000000e+00 1764.0
4 TraesCS2A01G023700 chr2D 92.476 319 21 2 3713 4031 10929420 10929735 1.710000e-123 453.0
5 TraesCS2A01G023700 chr2D 86.402 353 30 11 3370 3721 10917855 10918190 1.770000e-98 370.0
6 TraesCS2A01G023700 chr2D 75.168 894 164 43 1510 2382 11214925 11215781 6.360000e-98 368.0
7 TraesCS2A01G023700 chr2D 77.855 429 92 3 2609 3035 11040126 11040553 3.090000e-66 263.0
8 TraesCS2A01G023700 chr2D 81.673 251 39 5 2175 2423 11016722 11016967 6.830000e-48 202.0
9 TraesCS2A01G023700 chr2D 80.000 175 28 7 1871 2041 11039325 11039496 5.470000e-24 122.0
10 TraesCS2A01G023700 chr2B 92.920 1695 85 16 423 2102 16768296 16769970 0.000000e+00 2433.0
11 TraesCS2A01G023700 chr2B 84.846 1135 158 13 969 2094 16198217 16199346 0.000000e+00 1131.0
12 TraesCS2A01G023700 chr2B 84.447 1048 106 23 2144 3189 16769967 16770959 0.000000e+00 979.0
13 TraesCS2A01G023700 chr2B 90.129 618 31 5 3 609 16756326 16756924 0.000000e+00 776.0
14 TraesCS2A01G023700 chr2B 89.968 618 32 9 3 609 16745750 16746348 0.000000e+00 771.0
15 TraesCS2A01G023700 chr2B 89.806 618 32 6 3 609 16765068 16765665 0.000000e+00 763.0
16 TraesCS2A01G023700 chr2B 89.869 612 33 9 9 609 16729931 16730524 0.000000e+00 760.0
17 TraesCS2A01G023700 chr2B 89.016 610 36 10 3 609 16763753 16764334 0.000000e+00 726.0
18 TraesCS2A01G023700 chr2B 88.673 618 36 8 3 609 16748408 16749002 0.000000e+00 723.0
19 TraesCS2A01G023700 chr2B 88.673 618 32 5 3 609 16752351 16752941 0.000000e+00 719.0
20 TraesCS2A01G023700 chr2B 87.903 620 37 7 3 609 16733869 16734463 0.000000e+00 695.0
21 TraesCS2A01G023700 chr2B 87.864 618 31 8 3 609 16759820 16760404 0.000000e+00 686.0
22 TraesCS2A01G023700 chr2B 90.865 208 8 2 413 609 16736901 16737108 6.640000e-68 268.0
23 TraesCS2A01G023700 chr2B 73.133 897 178 42 1544 2418 17432078 17432933 3.090000e-66 263.0
24 TraesCS2A01G023700 chr2B 75.895 531 103 18 2608 3136 16857183 16857690 8.650000e-62 248.0
25 TraesCS2A01G023700 chr2B 89.216 204 11 5 417 609 16743488 16743691 1.120000e-60 244.0
26 TraesCS2A01G023700 chr2B 89.394 198 10 2 423 609 16740850 16741047 5.210000e-59 239.0
27 TraesCS2A01G023700 chr2B 75.564 532 91 28 1518 2041 17369481 17368981 4.050000e-55 226.0
28 TraesCS2A01G023700 chrUn 76.367 622 114 23 2587 3205 12635685 12635094 1.820000e-78 303.0
29 TraesCS2A01G023700 chrUn 78.634 454 94 3 2584 3035 12182839 12183291 8.470000e-77 298.0
30 TraesCS2A01G023700 chrUn 76.424 509 95 23 1546 2045 12181884 12182376 6.690000e-63 252.0
31 TraesCS2A01G023700 chrUn 77.541 423 91 3 2615 3035 12188194 12188614 6.690000e-63 252.0
32 TraesCS2A01G023700 chrUn 75.446 505 104 12 1544 2045 12636733 12636246 1.130000e-55 228.0
33 TraesCS2A01G023700 chr6B 75.191 262 58 5 1560 1816 2887196 2887455 2.550000e-22 117.0
34 TraesCS2A01G023700 chr6B 84.848 66 9 1 1041 1105 3172582 3172517 9.350000e-07 65.8
35 TraesCS2A01G023700 chr5A 85.417 96 14 0 2936 3031 17581427 17581522 2.560000e-17 100.0
36 TraesCS2A01G023700 chr5D 91.935 62 5 0 2945 3006 24798750 24798689 2.000000e-13 87.9
37 TraesCS2A01G023700 chr4B 89.091 55 4 1 1058 1110 646591437 646591383 2.600000e-07 67.6
38 TraesCS2A01G023700 chr5B 82.609 69 8 4 1031 1097 64743365 64743299 1.560000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G023700 chr2A 11619324 11623354 4030 False 7444.000000 7444 100.000000 1 4031 1 chr2A.!!$F1 4030
1 TraesCS2A01G023700 chr2D 10914163 10918190 4027 False 1611.000000 2699 89.685667 1 3721 3 chr2D.!!$F4 3720
2 TraesCS2A01G023700 chr2D 11214925 11215781 856 False 368.000000 368 75.168000 1510 2382 1 chr2D.!!$F3 872
3 TraesCS2A01G023700 chr2B 16198217 16199346 1129 False 1131.000000 1131 84.846000 969 2094 1 chr2B.!!$F1 1125
4 TraesCS2A01G023700 chr2B 16729931 16770959 41028 False 770.142857 2433 89.195929 3 3189 14 chr2B.!!$F4 3186
5 TraesCS2A01G023700 chr2B 17432078 17432933 855 False 263.000000 263 73.133000 1544 2418 1 chr2B.!!$F3 874
6 TraesCS2A01G023700 chr2B 16857183 16857690 507 False 248.000000 248 75.895000 2608 3136 1 chr2B.!!$F2 528
7 TraesCS2A01G023700 chr2B 17368981 17369481 500 True 226.000000 226 75.564000 1518 2041 1 chr2B.!!$R1 523
8 TraesCS2A01G023700 chrUn 12181884 12183291 1407 False 275.000000 298 77.529000 1546 3035 2 chrUn.!!$F2 1489
9 TraesCS2A01G023700 chrUn 12635094 12636733 1639 True 265.500000 303 75.906500 1544 3205 2 chrUn.!!$R1 1661

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
597 38560 0.324368 ACCTCCACTATGCCTCGTCA 60.324 55.0 0.0 0.0 0.0 4.35 F
2196 40295 0.594796 CGTGCAGGCAAGTGAAAACC 60.595 55.0 0.0 0.0 0.0 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2461 40569 0.036294 GTACAAGAGGAGTGGCACCC 60.036 60.0 15.27 15.08 0.0 4.61 R
3993 42506 0.037790 GCTTCTCTCCGACTGCAACT 60.038 55.0 0.00 0.00 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
137 6733 8.822805 TGGTAGTTAGATTCAGTGGACTTTAAT 58.177 33.333 0.00 0.00 0.00 1.40
166 22593 4.767928 CCTGAGGTTAGACTGTTAGACTGT 59.232 45.833 0.00 0.00 32.79 3.55
344 31553 7.616935 TCAGTCTGGACATGATATGCTCATATA 59.383 37.037 0.00 0.00 42.91 0.86
391 32913 9.436957 TTGGTCTACAATTCATTTTCTAGAGAC 57.563 33.333 0.00 0.00 33.18 3.36
439 34241 5.523588 AGAGAGAGAGAGAGAGAGAGAGAA 58.476 45.833 0.00 0.00 0.00 2.87
526 38478 6.255887 CGCCTTTTGTTATACTACAAGAGAGG 59.744 42.308 8.65 9.25 40.69 3.69
588 38551 4.660789 ACGCGTTAATTACCTCCACTAT 57.339 40.909 5.58 0.00 0.00 2.12
597 38560 0.324368 ACCTCCACTATGCCTCGTCA 60.324 55.000 0.00 0.00 0.00 4.35
618 38581 1.133025 CTGGATTTAAAGGCTGGTGCG 59.867 52.381 0.00 0.00 40.82 5.34
668 38631 2.554032 CCAAGGAGCGAACAAGTTCATT 59.446 45.455 12.86 0.52 39.46 2.57
683 38646 6.758886 ACAAGTTCATTATCATCTTCCGTCTC 59.241 38.462 0.00 0.00 0.00 3.36
692 38655 0.959553 TCTTCCGTCTCAACTTCGCT 59.040 50.000 0.00 0.00 0.00 4.93
853 38816 7.426929 TTGAATAGTTTCAGTCTTTGCTCTC 57.573 36.000 0.00 0.00 42.60 3.20
1205 39169 5.334724 GGAAGAGATTGCTGTGAAGAAACTG 60.335 44.000 0.00 0.00 0.00 3.16
1206 39170 4.712476 AGAGATTGCTGTGAAGAAACTGT 58.288 39.130 0.00 0.00 0.00 3.55
1333 39297 3.740832 TCTCGGCATAAATACATCAAGCG 59.259 43.478 0.00 0.00 0.00 4.68
1470 39434 8.309163 TGGCTAAATTTATTTGTTTGCAAGAG 57.691 30.769 0.00 0.00 35.82 2.85
1481 39445 8.752766 ATTTGTTTGCAAGAGAACATAATCAG 57.247 30.769 0.00 0.00 35.85 2.90
1482 39446 7.509141 TTGTTTGCAAGAGAACATAATCAGA 57.491 32.000 0.00 0.00 35.85 3.27
1483 39447 7.137490 TGTTTGCAAGAGAACATAATCAGAG 57.863 36.000 0.00 0.00 31.30 3.35
1507 39473 7.952671 AGGTATATTATTGATGTGTGTCTCGT 58.047 34.615 0.00 0.00 0.00 4.18
1800 39775 6.767902 ACACAGTAAGTTGATGTCTCATGTTT 59.232 34.615 0.00 0.00 0.00 2.83
1886 39864 4.456911 GGTTATGATATCATGCAGTGGGTG 59.543 45.833 25.44 0.00 37.15 4.61
1985 39963 2.578021 AGATGGTGGCTGGAAATACTGT 59.422 45.455 0.00 0.00 0.00 3.55
2055 40039 9.346725 CTTGTAAGAAAATCCTATGCAACTTTC 57.653 33.333 0.00 0.00 0.00 2.62
2103 40171 8.942338 TCTAACCATGAACATACATTGTACTC 57.058 34.615 0.00 0.00 37.68 2.59
2104 40172 8.758829 TCTAACCATGAACATACATTGTACTCT 58.241 33.333 0.00 0.00 37.68 3.24
2105 40173 7.615582 AACCATGAACATACATTGTACTCTG 57.384 36.000 0.00 0.00 37.68 3.35
2106 40174 5.586243 ACCATGAACATACATTGTACTCTGC 59.414 40.000 0.00 0.00 37.68 4.26
2107 40175 5.585844 CCATGAACATACATTGTACTCTGCA 59.414 40.000 0.00 0.00 37.68 4.41
2108 40176 6.457392 CCATGAACATACATTGTACTCTGCAC 60.457 42.308 0.00 0.00 37.68 4.57
2109 40177 5.546526 TGAACATACATTGTACTCTGCACA 58.453 37.500 0.00 0.00 37.68 4.57
2110 40178 6.172630 TGAACATACATTGTACTCTGCACAT 58.827 36.000 0.00 0.00 37.68 3.21
2111 40179 7.327214 TGAACATACATTGTACTCTGCACATA 58.673 34.615 0.00 0.00 37.68 2.29
2112 40180 7.986889 TGAACATACATTGTACTCTGCACATAT 59.013 33.333 0.00 0.00 37.68 1.78
2113 40181 8.737168 AACATACATTGTACTCTGCACATATT 57.263 30.769 0.00 0.00 37.68 1.28
2114 40182 8.370493 ACATACATTGTACTCTGCACATATTC 57.630 34.615 0.00 0.00 36.57 1.75
2115 40183 5.973651 ACATTGTACTCTGCACATATTCG 57.026 39.130 0.00 0.00 0.00 3.34
2116 40184 5.660460 ACATTGTACTCTGCACATATTCGA 58.340 37.500 0.00 0.00 0.00 3.71
2117 40185 6.106003 ACATTGTACTCTGCACATATTCGAA 58.894 36.000 0.00 0.00 0.00 3.71
2118 40186 6.593770 ACATTGTACTCTGCACATATTCGAAA 59.406 34.615 0.00 0.00 0.00 3.46
2119 40187 7.119116 ACATTGTACTCTGCACATATTCGAAAA 59.881 33.333 0.00 0.00 0.00 2.29
2120 40188 6.403333 TGTACTCTGCACATATTCGAAAAC 57.597 37.500 0.00 0.00 0.00 2.43
2121 40189 6.163476 TGTACTCTGCACATATTCGAAAACT 58.837 36.000 0.00 0.00 0.00 2.66
2122 40190 5.536554 ACTCTGCACATATTCGAAAACTG 57.463 39.130 0.00 2.62 0.00 3.16
2123 40191 4.393062 ACTCTGCACATATTCGAAAACTGG 59.607 41.667 0.00 0.00 0.00 4.00
2124 40192 4.574892 TCTGCACATATTCGAAAACTGGA 58.425 39.130 0.00 0.00 0.00 3.86
2125 40193 4.391830 TCTGCACATATTCGAAAACTGGAC 59.608 41.667 0.00 0.00 0.00 4.02
2126 40194 3.438781 TGCACATATTCGAAAACTGGACC 59.561 43.478 0.00 0.00 0.00 4.46
2135 40203 7.989416 ATTCGAAAACTGGACCATAAGTTTA 57.011 32.000 0.00 0.00 43.92 2.01
2141 40209 6.850752 AACTGGACCATAAGTTTATTTGGG 57.149 37.500 0.00 0.00 32.75 4.12
2143 40211 6.187682 ACTGGACCATAAGTTTATTTGGGAG 58.812 40.000 0.00 0.00 0.00 4.30
2145 40213 7.037153 ACTGGACCATAAGTTTATTTGGGAGTA 60.037 37.037 0.00 0.00 0.00 2.59
2146 40214 7.114095 TGGACCATAAGTTTATTTGGGAGTAC 58.886 38.462 0.00 0.00 0.00 2.73
2196 40295 0.594796 CGTGCAGGCAAGTGAAAACC 60.595 55.000 0.00 0.00 0.00 3.27
2304 40409 2.568623 AAGGTGTGTGGACAAGGATC 57.431 50.000 0.00 0.00 32.49 3.36
2324 40429 6.497259 AGGATCGAGATAAAAGGCCTTGTATA 59.503 38.462 25.46 16.30 0.00 1.47
2360 40465 5.300752 CAAGAACTTGAGGAACTAGAAGCA 58.699 41.667 8.65 0.00 41.55 3.91
2430 40538 1.143813 CCAGGTAGGCATGAGGGATT 58.856 55.000 0.00 0.00 0.00 3.01
2462 40570 4.902308 CATGGCTGCATGTGTTGG 57.098 55.556 0.50 0.00 0.00 3.77
2463 40571 1.216977 CATGGCTGCATGTGTTGGG 59.783 57.895 0.50 0.00 0.00 4.12
2491 40599 3.697045 CTCCTCTTGTACTGTCCCTGTAG 59.303 52.174 0.00 0.00 0.00 2.74
2492 40600 2.166664 CCTCTTGTACTGTCCCTGTAGC 59.833 54.545 0.00 0.00 0.00 3.58
2535 40643 2.727798 CTCTGTTTCAGCATTTTTGGCG 59.272 45.455 0.00 0.00 36.08 5.69
2555 40666 3.544244 GCGTGTCAGTTTTCTGTCTGAAC 60.544 47.826 0.00 0.00 46.98 3.18
2576 40687 8.192068 TGAACTTGTATCCACGTAATAATGTG 57.808 34.615 0.00 0.00 41.51 3.21
2577 40688 8.035984 TGAACTTGTATCCACGTAATAATGTGA 58.964 33.333 0.00 0.00 44.09 3.58
2580 40691 8.826710 ACTTGTATCCACGTAATAATGTGATTG 58.173 33.333 0.00 0.00 44.09 2.67
2585 40698 7.652300 TCCACGTAATAATGTGATTGCTATC 57.348 36.000 0.76 0.76 44.09 2.08
2590 40703 1.229428 AATGTGATTGCTATCGGCCG 58.771 50.000 22.12 22.12 40.92 6.13
2600 40713 1.069906 GCTATCGGCCGCACTAATTTG 60.070 52.381 23.51 6.22 34.27 2.32
2602 40715 0.748005 ATCGGCCGCACTAATTTGCT 60.748 50.000 23.51 0.00 40.62 3.91
2604 40717 0.730265 CGGCCGCACTAATTTGCTTA 59.270 50.000 14.67 0.00 40.62 3.09
2616 40730 8.578769 GCACTAATTTGCTTATTCTTCTTTTCG 58.421 33.333 0.00 0.00 39.59 3.46
2754 40868 2.298300 GACTTCATTGCGTTCAACGTG 58.702 47.619 12.40 1.98 44.73 4.49
2760 40874 2.661504 TTGCGTTCAACGTGAAGATG 57.338 45.000 12.40 0.00 44.73 2.90
2919 41033 0.174845 CCCGCATCGACCAAGAGTTA 59.825 55.000 0.00 0.00 0.00 2.24
2925 41039 3.739519 GCATCGACCAAGAGTTAGCATCT 60.740 47.826 0.00 0.00 0.00 2.90
3006 41120 2.308570 TGATGTGGTGAAGCTACCCATT 59.691 45.455 3.15 0.00 40.09 3.16
3076 41199 4.566004 CGAGAATGTCTCAGGTGGTAAAA 58.434 43.478 6.12 0.00 43.55 1.52
3214 41337 9.720769 AGCAGCTACTAAAAACACTAATTTCTA 57.279 29.630 0.00 0.00 0.00 2.10
3271 41394 3.644966 AGAAATAATCGCAAGGGTCCA 57.355 42.857 0.00 0.00 38.47 4.02
3358 41481 9.950496 AACATTGAAGATTACAGTATCTTGACT 57.050 29.630 3.77 0.00 43.18 3.41
3413 41926 5.954335 AGTGTTTGTTTCTCAGAAAAGGTG 58.046 37.500 0.00 0.00 0.00 4.00
3419 41932 2.847327 TCTCAGAAAAGGTGCCTCAG 57.153 50.000 0.00 0.00 0.00 3.35
3437 41950 1.741706 CAGGGTGTAGCATGAGCAAAG 59.258 52.381 0.00 0.00 45.49 2.77
3442 41955 3.378112 GGTGTAGCATGAGCAAAGCATTA 59.622 43.478 0.00 0.00 45.49 1.90
3443 41956 4.037208 GGTGTAGCATGAGCAAAGCATTAT 59.963 41.667 0.00 0.00 45.49 1.28
3444 41957 5.450965 GGTGTAGCATGAGCAAAGCATTATT 60.451 40.000 0.00 0.00 45.49 1.40
3445 41958 5.457799 GTGTAGCATGAGCAAAGCATTATTG 59.542 40.000 0.00 0.00 45.49 1.90
3446 41959 4.730949 AGCATGAGCAAAGCATTATTGT 57.269 36.364 0.00 0.00 45.49 2.71
3447 41960 4.679662 AGCATGAGCAAAGCATTATTGTC 58.320 39.130 0.00 0.00 45.49 3.18
3448 41961 4.401519 AGCATGAGCAAAGCATTATTGTCT 59.598 37.500 0.00 0.00 45.49 3.41
3451 41964 5.556355 TGAGCAAAGCATTATTGTCTCAG 57.444 39.130 8.34 0.00 36.72 3.35
3452 41965 4.397103 TGAGCAAAGCATTATTGTCTCAGG 59.603 41.667 8.34 0.00 36.72 3.86
3453 41966 3.698040 AGCAAAGCATTATTGTCTCAGGG 59.302 43.478 0.00 0.00 0.00 4.45
3454 41967 3.445096 GCAAAGCATTATTGTCTCAGGGT 59.555 43.478 0.00 0.00 0.00 4.34
3455 41968 4.676196 GCAAAGCATTATTGTCTCAGGGTG 60.676 45.833 0.00 0.00 0.00 4.61
3456 41969 2.648059 AGCATTATTGTCTCAGGGTGC 58.352 47.619 0.00 0.00 0.00 5.01
3457 41970 1.678101 GCATTATTGTCTCAGGGTGCC 59.322 52.381 0.00 0.00 0.00 5.01
3458 41971 2.684927 GCATTATTGTCTCAGGGTGCCT 60.685 50.000 0.00 0.00 0.00 4.75
3459 41972 3.209410 CATTATTGTCTCAGGGTGCCTC 58.791 50.000 0.00 0.00 0.00 4.70
3461 41974 0.617413 ATTGTCTCAGGGTGCCTCAG 59.383 55.000 0.00 0.00 0.00 3.35
3462 41975 1.483595 TTGTCTCAGGGTGCCTCAGG 61.484 60.000 0.00 0.00 0.00 3.86
3463 41976 2.284921 TCTCAGGGTGCCTCAGGG 60.285 66.667 0.00 0.00 0.00 4.45
3464 41977 2.608988 CTCAGGGTGCCTCAGGGT 60.609 66.667 0.00 0.00 34.45 4.34
3465 41978 2.930019 TCAGGGTGCCTCAGGGTG 60.930 66.667 0.00 0.00 34.45 4.61
3469 41982 4.416738 GGTGCCTCAGGGTGCCTC 62.417 72.222 0.00 0.00 34.45 4.70
3470 41983 3.640407 GTGCCTCAGGGTGCCTCA 61.640 66.667 0.00 0.00 34.45 3.86
3471 41984 3.324930 TGCCTCAGGGTGCCTCAG 61.325 66.667 0.00 0.00 34.45 3.35
3472 41985 4.106925 GCCTCAGGGTGCCTCAGG 62.107 72.222 0.00 0.00 34.45 3.86
3473 41986 3.406200 CCTCAGGGTGCCTCAGGG 61.406 72.222 0.00 0.00 0.00 4.45
3474 41987 2.608988 CTCAGGGTGCCTCAGGGT 60.609 66.667 0.00 0.00 34.45 4.34
3475 41988 2.930019 TCAGGGTGCCTCAGGGTG 60.930 66.667 0.00 0.00 34.45 4.61
3476 41989 4.729918 CAGGGTGCCTCAGGGTGC 62.730 72.222 0.00 0.00 34.45 5.01
3479 41992 4.416738 GGTGCCTCAGGGTGCCTC 62.417 72.222 0.00 0.00 34.45 4.70
3480 41993 3.640407 GTGCCTCAGGGTGCCTCA 61.640 66.667 0.00 0.00 34.45 3.86
3481 41994 3.324930 TGCCTCAGGGTGCCTCAG 61.325 66.667 0.00 0.00 34.45 3.35
3482 41995 3.325753 GCCTCAGGGTGCCTCAGT 61.326 66.667 0.00 0.00 34.45 3.41
3483 41996 2.667418 CCTCAGGGTGCCTCAGTG 59.333 66.667 0.00 0.00 0.00 3.66
3506 42019 6.256757 GTGTTTCTACCATCATCTTGCTACTC 59.743 42.308 0.00 0.00 0.00 2.59
3605 42118 7.433131 GGCACACATTATTGTCTATGAATGTTG 59.567 37.037 0.00 0.00 39.81 3.33
3607 42120 9.281075 CACACATTATTGTCTATGAATGTTGTG 57.719 33.333 0.00 0.00 39.81 3.33
3610 42123 8.390354 ACATTATTGTCTATGAATGTTGTGTCG 58.610 33.333 0.00 0.00 38.97 4.35
3630 42143 1.804748 GCTTTTCACCCTCTTACACGG 59.195 52.381 0.00 0.00 0.00 4.94
3716 42229 5.535029 TCCCTATTCTAAAGCCTGGAGTAA 58.465 41.667 0.00 0.00 0.00 2.24
3718 42231 6.619852 TCCCTATTCTAAAGCCTGGAGTAAAT 59.380 38.462 0.00 0.00 0.00 1.40
3720 42233 8.437575 CCCTATTCTAAAGCCTGGAGTAAATTA 58.562 37.037 0.00 0.00 0.00 1.40
3721 42234 9.274206 CCTATTCTAAAGCCTGGAGTAAATTAC 57.726 37.037 0.00 0.00 0.00 1.89
3724 42237 9.755122 ATTCTAAAGCCTGGAGTAAATTACTTT 57.245 29.630 7.14 0.00 39.59 2.66
3725 42238 9.582648 TTCTAAAGCCTGGAGTAAATTACTTTT 57.417 29.630 7.14 5.50 39.59 2.27
3726 42239 9.010029 TCTAAAGCCTGGAGTAAATTACTTTTG 57.990 33.333 7.14 1.10 39.59 2.44
3727 42240 5.644977 AGCCTGGAGTAAATTACTTTTGC 57.355 39.130 7.14 8.11 39.59 3.68
3728 42241 5.076873 AGCCTGGAGTAAATTACTTTTGCA 58.923 37.500 7.14 0.00 39.59 4.08
3729 42242 5.048013 AGCCTGGAGTAAATTACTTTTGCAC 60.048 40.000 7.14 0.00 39.59 4.57
3730 42243 5.048013 GCCTGGAGTAAATTACTTTTGCACT 60.048 40.000 7.14 0.00 39.59 4.40
3731 42244 6.150474 GCCTGGAGTAAATTACTTTTGCACTA 59.850 38.462 7.14 0.00 39.59 2.74
3732 42245 7.626452 GCCTGGAGTAAATTACTTTTGCACTAG 60.626 40.741 7.14 1.19 39.59 2.57
3733 42246 7.141100 TGGAGTAAATTACTTTTGCACTAGC 57.859 36.000 7.14 0.00 39.59 3.42
3734 42247 6.940298 TGGAGTAAATTACTTTTGCACTAGCT 59.060 34.615 7.14 0.00 39.59 3.32
3735 42248 8.098286 TGGAGTAAATTACTTTTGCACTAGCTA 58.902 33.333 7.14 0.00 39.59 3.32
3736 42249 8.604890 GGAGTAAATTACTTTTGCACTAGCTAG 58.395 37.037 19.44 19.44 39.59 3.42
3737 42250 8.494016 AGTAAATTACTTTTGCACTAGCTAGG 57.506 34.615 24.35 14.10 37.42 3.02
3738 42251 8.319146 AGTAAATTACTTTTGCACTAGCTAGGA 58.681 33.333 24.35 5.55 37.42 2.94
3739 42252 7.617041 AAATTACTTTTGCACTAGCTAGGAG 57.383 36.000 24.35 16.77 42.74 3.69
3740 42253 5.995565 TTACTTTTGCACTAGCTAGGAGA 57.004 39.130 24.35 4.82 42.74 3.71
3741 42254 6.546428 TTACTTTTGCACTAGCTAGGAGAT 57.454 37.500 24.35 0.40 42.74 2.75
3742 42255 4.764172 ACTTTTGCACTAGCTAGGAGATG 58.236 43.478 24.35 14.21 42.74 2.90
3743 42256 3.827008 TTTGCACTAGCTAGGAGATGG 57.173 47.619 24.35 7.84 42.74 3.51
3744 42257 2.755952 TGCACTAGCTAGGAGATGGA 57.244 50.000 24.35 11.93 42.74 3.41
3745 42258 3.032265 TGCACTAGCTAGGAGATGGAA 57.968 47.619 24.35 0.00 42.74 3.53
3746 42259 3.581101 TGCACTAGCTAGGAGATGGAAT 58.419 45.455 24.35 0.00 42.74 3.01
3747 42260 3.323115 TGCACTAGCTAGGAGATGGAATG 59.677 47.826 24.35 11.12 42.74 2.67
3748 42261 3.306641 GCACTAGCTAGGAGATGGAATGG 60.307 52.174 24.35 0.00 37.91 3.16
3749 42262 3.900601 CACTAGCTAGGAGATGGAATGGT 59.099 47.826 24.35 0.00 0.00 3.55
3750 42263 4.346418 CACTAGCTAGGAGATGGAATGGTT 59.654 45.833 24.35 0.00 0.00 3.67
3751 42264 5.540337 CACTAGCTAGGAGATGGAATGGTTA 59.460 44.000 24.35 0.00 0.00 2.85
3752 42265 6.212388 CACTAGCTAGGAGATGGAATGGTTAT 59.788 42.308 24.35 0.00 0.00 1.89
3753 42266 5.753721 AGCTAGGAGATGGAATGGTTATC 57.246 43.478 0.00 0.00 0.00 1.75
3754 42267 5.410602 AGCTAGGAGATGGAATGGTTATCT 58.589 41.667 0.00 0.00 34.06 1.98
3755 42268 6.565974 AGCTAGGAGATGGAATGGTTATCTA 58.434 40.000 0.00 0.00 31.67 1.98
3756 42269 6.439058 AGCTAGGAGATGGAATGGTTATCTAC 59.561 42.308 0.00 0.00 32.96 2.59
3757 42270 6.211584 GCTAGGAGATGGAATGGTTATCTACA 59.788 42.308 0.00 0.00 34.82 2.74
3758 42271 7.093112 GCTAGGAGATGGAATGGTTATCTACAT 60.093 40.741 0.00 0.00 34.82 2.29
3759 42272 7.251321 AGGAGATGGAATGGTTATCTACATC 57.749 40.000 0.00 0.00 34.82 3.06
3760 42273 6.214412 AGGAGATGGAATGGTTATCTACATCC 59.786 42.308 0.00 0.00 34.82 3.51
3761 42274 6.214412 GGAGATGGAATGGTTATCTACATCCT 59.786 42.308 0.00 0.00 35.16 3.24
3762 42275 7.400339 GGAGATGGAATGGTTATCTACATCCTA 59.600 40.741 0.00 0.00 35.16 2.94
3763 42276 8.140112 AGATGGAATGGTTATCTACATCCTAC 57.860 38.462 0.00 0.00 35.16 3.18
3764 42277 7.734865 AGATGGAATGGTTATCTACATCCTACA 59.265 37.037 0.00 0.00 35.16 2.74
3765 42278 7.684317 TGGAATGGTTATCTACATCCTACAA 57.316 36.000 0.00 0.00 0.00 2.41
3766 42279 7.735917 TGGAATGGTTATCTACATCCTACAAG 58.264 38.462 0.00 0.00 0.00 3.16
3767 42280 7.162082 GGAATGGTTATCTACATCCTACAAGG 58.838 42.308 0.00 0.00 36.46 3.61
3768 42281 7.202102 GGAATGGTTATCTACATCCTACAAGGT 60.202 40.741 0.00 0.00 36.53 3.50
3769 42282 8.792830 AATGGTTATCTACATCCTACAAGGTA 57.207 34.615 0.00 0.00 36.53 3.08
3770 42283 7.834881 TGGTTATCTACATCCTACAAGGTAG 57.165 40.000 0.00 0.00 36.53 3.18
3771 42284 6.267014 TGGTTATCTACATCCTACAAGGTAGC 59.733 42.308 0.00 0.00 36.53 3.58
3772 42285 6.267014 GGTTATCTACATCCTACAAGGTAGCA 59.733 42.308 0.00 0.00 36.53 3.49
3773 42286 7.038941 GGTTATCTACATCCTACAAGGTAGCAT 60.039 40.741 0.00 0.00 36.53 3.79
3774 42287 6.597832 ATCTACATCCTACAAGGTAGCATC 57.402 41.667 0.00 0.00 36.53 3.91
3775 42288 3.735237 ACATCCTACAAGGTAGCATCG 57.265 47.619 0.00 0.00 36.53 3.84
3776 42289 3.031736 ACATCCTACAAGGTAGCATCGT 58.968 45.455 0.00 0.00 36.53 3.73
3777 42290 3.451178 ACATCCTACAAGGTAGCATCGTT 59.549 43.478 0.00 0.00 36.53 3.85
3778 42291 3.520290 TCCTACAAGGTAGCATCGTTG 57.480 47.619 10.46 10.46 36.53 4.10
3779 42292 3.093814 TCCTACAAGGTAGCATCGTTGA 58.906 45.455 16.29 4.30 36.53 3.18
3780 42293 3.704566 TCCTACAAGGTAGCATCGTTGAT 59.295 43.478 16.29 0.00 36.53 2.57
3781 42294 4.891168 TCCTACAAGGTAGCATCGTTGATA 59.109 41.667 16.29 0.00 36.53 2.15
3782 42295 4.982916 CCTACAAGGTAGCATCGTTGATAC 59.017 45.833 12.37 12.37 42.66 2.24
3783 42296 4.465632 ACAAGGTAGCATCGTTGATACA 57.534 40.909 20.07 0.00 44.67 2.29
3784 42297 4.181578 ACAAGGTAGCATCGTTGATACAC 58.818 43.478 20.07 11.43 44.67 2.90
3785 42298 4.180817 CAAGGTAGCATCGTTGATACACA 58.819 43.478 20.07 0.00 44.67 3.72
3786 42299 3.782046 AGGTAGCATCGTTGATACACAC 58.218 45.455 20.07 6.43 44.67 3.82
3787 42300 3.194755 AGGTAGCATCGTTGATACACACA 59.805 43.478 20.07 0.00 44.67 3.72
3788 42301 3.551890 GGTAGCATCGTTGATACACACAG 59.448 47.826 20.07 0.00 44.67 3.66
3789 42302 2.002586 AGCATCGTTGATACACACAGC 58.997 47.619 0.00 0.00 0.00 4.40
3790 42303 1.731709 GCATCGTTGATACACACAGCA 59.268 47.619 0.00 0.00 0.00 4.41
3791 42304 2.474526 GCATCGTTGATACACACAGCAC 60.475 50.000 0.00 0.00 0.00 4.40
3792 42305 2.517650 TCGTTGATACACACAGCACA 57.482 45.000 0.00 0.00 0.00 4.57
3793 42306 2.827652 TCGTTGATACACACAGCACAA 58.172 42.857 0.00 0.00 0.00 3.33
3794 42307 2.799978 TCGTTGATACACACAGCACAAG 59.200 45.455 0.00 0.00 0.00 3.16
3795 42308 2.096268 CGTTGATACACACAGCACAAGG 60.096 50.000 0.00 0.00 0.00 3.61
3796 42309 1.522668 TGATACACACAGCACAAGGC 58.477 50.000 0.00 0.00 45.30 4.35
3805 42318 4.959446 GCACAAGGCAGCTTTCTG 57.041 55.556 0.00 0.00 43.97 3.02
3806 42319 2.334307 GCACAAGGCAGCTTTCTGA 58.666 52.632 0.00 0.00 42.95 3.27
3807 42320 0.240411 GCACAAGGCAGCTTTCTGAG 59.760 55.000 0.00 0.00 42.95 3.35
3808 42321 1.602311 CACAAGGCAGCTTTCTGAGT 58.398 50.000 0.00 0.00 42.95 3.41
3809 42322 1.952296 CACAAGGCAGCTTTCTGAGTT 59.048 47.619 0.00 0.00 42.95 3.01
3810 42323 1.952296 ACAAGGCAGCTTTCTGAGTTG 59.048 47.619 0.00 1.91 42.95 3.16
3816 42329 3.909776 CAGCTTTCTGAGTTGCATCAA 57.090 42.857 0.00 0.00 42.95 2.57
3817 42330 4.436242 CAGCTTTCTGAGTTGCATCAAT 57.564 40.909 0.00 0.00 42.95 2.57
3818 42331 4.413087 CAGCTTTCTGAGTTGCATCAATC 58.587 43.478 0.00 0.00 42.95 2.67
3819 42332 4.077108 AGCTTTCTGAGTTGCATCAATCA 58.923 39.130 0.00 0.00 0.00 2.57
3820 42333 4.521639 AGCTTTCTGAGTTGCATCAATCAA 59.478 37.500 0.00 0.00 0.00 2.57
3821 42334 5.010314 AGCTTTCTGAGTTGCATCAATCAAA 59.990 36.000 0.00 0.00 0.00 2.69
3822 42335 5.693104 GCTTTCTGAGTTGCATCAATCAAAA 59.307 36.000 0.00 0.00 0.00 2.44
3823 42336 6.201425 GCTTTCTGAGTTGCATCAATCAAAAA 59.799 34.615 0.00 0.00 0.00 1.94
3824 42337 7.467557 TTTCTGAGTTGCATCAATCAAAAAC 57.532 32.000 0.00 0.00 0.00 2.43
3825 42338 5.214417 TCTGAGTTGCATCAATCAAAAACG 58.786 37.500 0.00 0.00 0.00 3.60
3826 42339 4.297510 TGAGTTGCATCAATCAAAAACGG 58.702 39.130 0.00 0.00 0.00 4.44
3827 42340 4.037327 TGAGTTGCATCAATCAAAAACGGA 59.963 37.500 0.00 0.00 0.00 4.69
3828 42341 5.138125 AGTTGCATCAATCAAAAACGGAT 57.862 34.783 0.00 0.00 0.00 4.18
3829 42342 5.163513 AGTTGCATCAATCAAAAACGGATC 58.836 37.500 0.00 0.00 0.00 3.36
3830 42343 5.047802 AGTTGCATCAATCAAAAACGGATCT 60.048 36.000 0.00 0.00 0.00 2.75
3831 42344 4.735985 TGCATCAATCAAAAACGGATCTG 58.264 39.130 0.00 0.00 0.00 2.90
3832 42345 4.458642 TGCATCAATCAAAAACGGATCTGA 59.541 37.500 9.00 0.00 0.00 3.27
3833 42346 4.795278 GCATCAATCAAAAACGGATCTGAC 59.205 41.667 9.00 0.00 0.00 3.51
3834 42347 5.392380 GCATCAATCAAAAACGGATCTGACT 60.392 40.000 9.00 0.00 0.00 3.41
3835 42348 5.862924 TCAATCAAAAACGGATCTGACTC 57.137 39.130 9.00 0.00 0.00 3.36
3836 42349 5.304778 TCAATCAAAAACGGATCTGACTCA 58.695 37.500 9.00 0.00 0.00 3.41
3837 42350 5.939883 TCAATCAAAAACGGATCTGACTCAT 59.060 36.000 9.00 0.00 0.00 2.90
3838 42351 7.102993 TCAATCAAAAACGGATCTGACTCATA 58.897 34.615 9.00 0.00 0.00 2.15
3839 42352 7.606073 TCAATCAAAAACGGATCTGACTCATAA 59.394 33.333 9.00 0.00 0.00 1.90
3840 42353 6.968131 TCAAAAACGGATCTGACTCATAAG 57.032 37.500 9.00 0.00 0.00 1.73
3841 42354 5.351465 TCAAAAACGGATCTGACTCATAAGC 59.649 40.000 9.00 0.00 0.00 3.09
3842 42355 3.460857 AACGGATCTGACTCATAAGCC 57.539 47.619 9.00 0.00 0.00 4.35
3843 42356 2.388735 ACGGATCTGACTCATAAGCCA 58.611 47.619 9.00 0.00 0.00 4.75
3844 42357 2.766263 ACGGATCTGACTCATAAGCCAA 59.234 45.455 9.00 0.00 0.00 4.52
3845 42358 3.197766 ACGGATCTGACTCATAAGCCAAA 59.802 43.478 9.00 0.00 0.00 3.28
3846 42359 4.141620 ACGGATCTGACTCATAAGCCAAAT 60.142 41.667 9.00 0.00 0.00 2.32
3847 42360 4.818546 CGGATCTGACTCATAAGCCAAATT 59.181 41.667 0.00 0.00 0.00 1.82
3848 42361 5.297776 CGGATCTGACTCATAAGCCAAATTT 59.702 40.000 0.00 0.00 0.00 1.82
3849 42362 6.183360 CGGATCTGACTCATAAGCCAAATTTT 60.183 38.462 0.00 0.00 0.00 1.82
3850 42363 6.976925 GGATCTGACTCATAAGCCAAATTTTG 59.023 38.462 1.99 1.99 0.00 2.44
3851 42364 5.713025 TCTGACTCATAAGCCAAATTTTGC 58.287 37.500 6.14 6.14 0.00 3.68
3852 42365 4.819769 TGACTCATAAGCCAAATTTTGCC 58.180 39.130 10.43 0.00 0.00 4.52
3853 42366 3.848726 ACTCATAAGCCAAATTTTGCCG 58.151 40.909 10.43 0.00 0.00 5.69
3854 42367 2.604462 CTCATAAGCCAAATTTTGCCGC 59.396 45.455 10.43 3.28 0.00 6.53
3855 42368 2.028658 TCATAAGCCAAATTTTGCCGCA 60.029 40.909 10.43 0.00 0.00 5.69
3856 42369 2.758736 TAAGCCAAATTTTGCCGCAT 57.241 40.000 10.43 4.09 0.00 4.73
3857 42370 1.894881 AAGCCAAATTTTGCCGCATT 58.105 40.000 10.43 0.00 0.00 3.56
3858 42371 2.758736 AGCCAAATTTTGCCGCATTA 57.241 40.000 10.43 0.00 0.00 1.90
3859 42372 3.051081 AGCCAAATTTTGCCGCATTAA 57.949 38.095 10.43 0.00 0.00 1.40
3860 42373 2.741517 AGCCAAATTTTGCCGCATTAAC 59.258 40.909 10.43 0.00 0.00 2.01
3861 42374 2.741517 GCCAAATTTTGCCGCATTAACT 59.258 40.909 2.86 0.00 0.00 2.24
3862 42375 3.424697 GCCAAATTTTGCCGCATTAACTG 60.425 43.478 2.86 0.00 0.00 3.16
3863 42376 3.745458 CCAAATTTTGCCGCATTAACTGT 59.255 39.130 3.50 0.00 0.00 3.55
3864 42377 4.926238 CCAAATTTTGCCGCATTAACTGTA 59.074 37.500 3.50 0.00 0.00 2.74
3865 42378 5.062058 CCAAATTTTGCCGCATTAACTGTAG 59.938 40.000 3.50 0.00 0.00 2.74
3866 42379 2.911819 TTTGCCGCATTAACTGTAGC 57.088 45.000 0.00 0.00 0.00 3.58
3867 42380 1.814793 TTGCCGCATTAACTGTAGCA 58.185 45.000 0.00 0.00 34.51 3.49
3868 42381 1.814793 TGCCGCATTAACTGTAGCAA 58.185 45.000 0.00 0.00 33.75 3.91
3869 42382 1.466950 TGCCGCATTAACTGTAGCAAC 59.533 47.619 0.00 0.00 33.75 4.17
3870 42383 1.737793 GCCGCATTAACTGTAGCAACT 59.262 47.619 0.00 0.00 0.00 3.16
3871 42384 2.476185 GCCGCATTAACTGTAGCAACTG 60.476 50.000 0.00 0.00 0.00 3.16
3872 42385 3.000041 CCGCATTAACTGTAGCAACTGA 59.000 45.455 0.00 0.00 0.00 3.41
3873 42386 3.623060 CCGCATTAACTGTAGCAACTGAT 59.377 43.478 0.00 0.00 0.00 2.90
3874 42387 4.260375 CCGCATTAACTGTAGCAACTGATC 60.260 45.833 0.00 0.00 0.00 2.92
3875 42388 4.568359 CGCATTAACTGTAGCAACTGATCT 59.432 41.667 0.00 0.00 0.00 2.75
3876 42389 5.501413 CGCATTAACTGTAGCAACTGATCTG 60.501 44.000 0.00 0.00 0.00 2.90
3877 42390 5.728898 GCATTAACTGTAGCAACTGATCTGC 60.729 44.000 0.00 0.00 40.24 4.26
3878 42391 2.393271 ACTGTAGCAACTGATCTGCC 57.607 50.000 2.04 0.00 40.86 4.85
3879 42392 1.905215 ACTGTAGCAACTGATCTGCCT 59.095 47.619 2.04 0.00 40.86 4.75
3880 42393 2.093764 ACTGTAGCAACTGATCTGCCTC 60.094 50.000 2.04 0.00 40.86 4.70
3881 42394 1.208052 TGTAGCAACTGATCTGCCTCC 59.792 52.381 2.04 0.00 40.86 4.30
3882 42395 0.833287 TAGCAACTGATCTGCCTCCC 59.167 55.000 2.04 0.00 40.86 4.30
3883 42396 1.452833 GCAACTGATCTGCCTCCCC 60.453 63.158 0.00 0.00 33.51 4.81
3884 42397 1.993653 CAACTGATCTGCCTCCCCA 59.006 57.895 0.00 0.00 0.00 4.96
3885 42398 0.329261 CAACTGATCTGCCTCCCCAA 59.671 55.000 0.00 0.00 0.00 4.12
3886 42399 0.622665 AACTGATCTGCCTCCCCAAG 59.377 55.000 0.00 0.00 0.00 3.61
3887 42400 0.548682 ACTGATCTGCCTCCCCAAGT 60.549 55.000 0.00 0.00 0.00 3.16
3888 42401 0.622665 CTGATCTGCCTCCCCAAGTT 59.377 55.000 0.00 0.00 0.00 2.66
3889 42402 1.005215 CTGATCTGCCTCCCCAAGTTT 59.995 52.381 0.00 0.00 0.00 2.66
3890 42403 1.272092 TGATCTGCCTCCCCAAGTTTG 60.272 52.381 0.00 0.00 0.00 2.93
3891 42404 1.004745 GATCTGCCTCCCCAAGTTTGA 59.995 52.381 0.00 0.00 0.00 2.69
3892 42405 0.850100 TCTGCCTCCCCAAGTTTGAA 59.150 50.000 0.00 0.00 0.00 2.69
3893 42406 1.216678 TCTGCCTCCCCAAGTTTGAAA 59.783 47.619 0.00 0.00 0.00 2.69
3894 42407 2.158325 TCTGCCTCCCCAAGTTTGAAAT 60.158 45.455 0.00 0.00 0.00 2.17
3895 42408 2.634453 CTGCCTCCCCAAGTTTGAAATT 59.366 45.455 0.00 0.00 0.00 1.82
3896 42409 2.368221 TGCCTCCCCAAGTTTGAAATTG 59.632 45.455 0.00 0.00 34.07 2.32
3897 42410 2.632512 GCCTCCCCAAGTTTGAAATTGA 59.367 45.455 5.57 0.00 36.17 2.57
3898 42411 3.554960 GCCTCCCCAAGTTTGAAATTGAC 60.555 47.826 5.57 0.00 36.17 3.18
3899 42412 3.640967 CCTCCCCAAGTTTGAAATTGACA 59.359 43.478 5.57 0.00 36.17 3.58
3900 42413 4.501400 CCTCCCCAAGTTTGAAATTGACAC 60.501 45.833 5.57 0.00 36.17 3.67
3901 42414 3.386402 TCCCCAAGTTTGAAATTGACACC 59.614 43.478 5.57 0.00 36.17 4.16
3902 42415 3.387699 CCCCAAGTTTGAAATTGACACCT 59.612 43.478 5.57 0.00 36.17 4.00
3903 42416 4.586841 CCCCAAGTTTGAAATTGACACCTA 59.413 41.667 5.57 0.00 36.17 3.08
3904 42417 5.278957 CCCCAAGTTTGAAATTGACACCTAG 60.279 44.000 5.57 0.00 36.17 3.02
3905 42418 5.534654 CCCAAGTTTGAAATTGACACCTAGA 59.465 40.000 5.57 0.00 36.17 2.43
3906 42419 6.040391 CCCAAGTTTGAAATTGACACCTAGAA 59.960 38.462 5.57 0.00 36.17 2.10
3907 42420 7.255942 CCCAAGTTTGAAATTGACACCTAGAAT 60.256 37.037 5.57 0.00 36.17 2.40
3908 42421 8.792633 CCAAGTTTGAAATTGACACCTAGAATA 58.207 33.333 5.57 0.00 36.17 1.75
3911 42424 9.349713 AGTTTGAAATTGACACCTAGAATAACA 57.650 29.630 0.00 0.00 0.00 2.41
3912 42425 9.394477 GTTTGAAATTGACACCTAGAATAACAC 57.606 33.333 0.00 0.00 0.00 3.32
3913 42426 7.681939 TGAAATTGACACCTAGAATAACACC 57.318 36.000 0.00 0.00 0.00 4.16
3914 42427 7.458397 TGAAATTGACACCTAGAATAACACCT 58.542 34.615 0.00 0.00 0.00 4.00
3915 42428 7.942341 TGAAATTGACACCTAGAATAACACCTT 59.058 33.333 0.00 0.00 0.00 3.50
3916 42429 8.706322 AAATTGACACCTAGAATAACACCTTT 57.294 30.769 0.00 0.00 0.00 3.11
3917 42430 8.706322 AATTGACACCTAGAATAACACCTTTT 57.294 30.769 0.00 0.00 0.00 2.27
3918 42431 7.504924 TTGACACCTAGAATAACACCTTTTG 57.495 36.000 0.00 0.00 0.00 2.44
3919 42432 6.833041 TGACACCTAGAATAACACCTTTTGA 58.167 36.000 0.00 0.00 0.00 2.69
3920 42433 7.284074 TGACACCTAGAATAACACCTTTTGAA 58.716 34.615 0.00 0.00 0.00 2.69
3921 42434 7.942341 TGACACCTAGAATAACACCTTTTGAAT 59.058 33.333 0.00 0.00 0.00 2.57
3922 42435 8.336801 ACACCTAGAATAACACCTTTTGAATC 57.663 34.615 0.00 0.00 0.00 2.52
3923 42436 7.942341 ACACCTAGAATAACACCTTTTGAATCA 59.058 33.333 0.00 0.00 0.00 2.57
3924 42437 8.960591 CACCTAGAATAACACCTTTTGAATCAT 58.039 33.333 0.00 0.00 0.00 2.45
3925 42438 9.178758 ACCTAGAATAACACCTTTTGAATCATC 57.821 33.333 0.00 0.00 0.00 2.92
3926 42439 9.177608 CCTAGAATAACACCTTTTGAATCATCA 57.822 33.333 0.00 0.00 0.00 3.07
3928 42441 8.059798 AGAATAACACCTTTTGAATCATCAGG 57.940 34.615 6.67 6.67 36.78 3.86
3929 42442 7.890127 AGAATAACACCTTTTGAATCATCAGGA 59.110 33.333 13.44 0.00 36.78 3.86
3930 42443 8.421249 AATAACACCTTTTGAATCATCAGGAA 57.579 30.769 13.44 0.00 36.78 3.36
3931 42444 6.923199 AACACCTTTTGAATCATCAGGAAT 57.077 33.333 13.44 0.95 36.78 3.01
3932 42445 9.699410 ATAACACCTTTTGAATCATCAGGAATA 57.301 29.630 13.44 5.54 36.78 1.75
3933 42446 8.421249 AACACCTTTTGAATCATCAGGAATAA 57.579 30.769 13.44 0.00 36.78 1.40
3934 42447 8.421249 ACACCTTTTGAATCATCAGGAATAAA 57.579 30.769 13.44 0.00 36.78 1.40
3935 42448 8.526147 ACACCTTTTGAATCATCAGGAATAAAG 58.474 33.333 13.44 4.53 36.78 1.85
3936 42449 7.977853 CACCTTTTGAATCATCAGGAATAAAGG 59.022 37.037 14.00 14.00 45.60 3.11
3937 42450 7.675619 ACCTTTTGAATCATCAGGAATAAAGGT 59.324 33.333 15.00 15.00 46.79 3.50
3938 42451 8.534496 CCTTTTGAATCATCAGGAATAAAGGTT 58.466 33.333 9.48 0.00 40.49 3.50
3939 42452 9.362539 CTTTTGAATCATCAGGAATAAAGGTTG 57.637 33.333 0.00 0.00 36.78 3.77
3940 42453 8.648698 TTTGAATCATCAGGAATAAAGGTTGA 57.351 30.769 0.00 0.00 36.78 3.18
3941 42454 8.648698 TTGAATCATCAGGAATAAAGGTTGAA 57.351 30.769 0.00 0.00 36.78 2.69
3942 42455 8.284945 TGAATCATCAGGAATAAAGGTTGAAG 57.715 34.615 0.00 0.00 0.00 3.02
3943 42456 7.340232 TGAATCATCAGGAATAAAGGTTGAAGG 59.660 37.037 0.00 0.00 0.00 3.46
3944 42457 6.387192 TCATCAGGAATAAAGGTTGAAGGA 57.613 37.500 0.00 0.00 0.00 3.36
3945 42458 6.418101 TCATCAGGAATAAAGGTTGAAGGAG 58.582 40.000 0.00 0.00 0.00 3.69
3946 42459 5.179452 TCAGGAATAAAGGTTGAAGGAGG 57.821 43.478 0.00 0.00 0.00 4.30
3947 42460 3.696548 CAGGAATAAAGGTTGAAGGAGGC 59.303 47.826 0.00 0.00 0.00 4.70
3948 42461 2.683362 GGAATAAAGGTTGAAGGAGGCG 59.317 50.000 0.00 0.00 0.00 5.52
3949 42462 3.606687 GAATAAAGGTTGAAGGAGGCGA 58.393 45.455 0.00 0.00 0.00 5.54
3950 42463 2.762535 TAAAGGTTGAAGGAGGCGAG 57.237 50.000 0.00 0.00 0.00 5.03
3951 42464 0.765510 AAAGGTTGAAGGAGGCGAGT 59.234 50.000 0.00 0.00 0.00 4.18
3952 42465 0.321996 AAGGTTGAAGGAGGCGAGTC 59.678 55.000 0.00 0.00 0.00 3.36
3953 42466 1.446272 GGTTGAAGGAGGCGAGTCG 60.446 63.158 8.54 8.54 0.00 4.18
3954 42467 1.446272 GTTGAAGGAGGCGAGTCGG 60.446 63.158 15.52 0.00 0.00 4.79
3955 42468 1.605451 TTGAAGGAGGCGAGTCGGA 60.605 57.895 15.52 0.00 0.00 4.55
3956 42469 1.183030 TTGAAGGAGGCGAGTCGGAA 61.183 55.000 15.52 0.00 0.00 4.30
3957 42470 1.183030 TGAAGGAGGCGAGTCGGAAA 61.183 55.000 15.52 0.00 0.00 3.13
3958 42471 0.736672 GAAGGAGGCGAGTCGGAAAC 60.737 60.000 15.52 0.00 0.00 2.78
3959 42472 1.186267 AAGGAGGCGAGTCGGAAACT 61.186 55.000 15.52 0.00 42.42 2.66
3969 42482 3.553828 AGTCGGAAACTCTGAAACCAA 57.446 42.857 0.00 0.00 32.84 3.67
3970 42483 4.086706 AGTCGGAAACTCTGAAACCAAT 57.913 40.909 0.00 0.00 32.84 3.16
3971 42484 4.461198 AGTCGGAAACTCTGAAACCAATT 58.539 39.130 0.00 0.00 32.84 2.32
3972 42485 4.887655 AGTCGGAAACTCTGAAACCAATTT 59.112 37.500 0.00 0.00 32.84 1.82
3973 42486 4.976116 GTCGGAAACTCTGAAACCAATTTG 59.024 41.667 0.00 0.00 32.84 2.32
3974 42487 3.735746 CGGAAACTCTGAAACCAATTTGC 59.264 43.478 0.00 0.00 0.00 3.68
3975 42488 4.692228 GGAAACTCTGAAACCAATTTGCA 58.308 39.130 0.00 0.00 0.00 4.08
3976 42489 5.115480 GGAAACTCTGAAACCAATTTGCAA 58.885 37.500 0.00 0.00 0.00 4.08
3977 42490 5.006649 GGAAACTCTGAAACCAATTTGCAAC 59.993 40.000 0.00 0.00 0.00 4.17
3978 42491 4.058721 ACTCTGAAACCAATTTGCAACC 57.941 40.909 0.00 0.00 0.00 3.77
3979 42492 3.052036 CTCTGAAACCAATTTGCAACCG 58.948 45.455 0.00 0.00 0.00 4.44
3980 42493 2.134346 CTGAAACCAATTTGCAACCGG 58.866 47.619 0.00 0.00 0.00 5.28
3981 42494 0.865111 GAAACCAATTTGCAACCGGC 59.135 50.000 0.00 0.00 45.13 6.13
3992 42505 2.693797 GCAACCGGCATATTCAGATG 57.306 50.000 0.00 0.00 43.97 2.90
3993 42506 2.221169 GCAACCGGCATATTCAGATGA 58.779 47.619 0.00 0.00 43.97 2.92
3994 42507 2.225019 GCAACCGGCATATTCAGATGAG 59.775 50.000 0.00 0.00 43.97 2.90
3995 42508 3.470709 CAACCGGCATATTCAGATGAGT 58.529 45.455 0.00 0.00 0.00 3.41
3996 42509 3.845781 ACCGGCATATTCAGATGAGTT 57.154 42.857 0.00 0.00 0.00 3.01
3997 42510 3.470709 ACCGGCATATTCAGATGAGTTG 58.529 45.455 0.00 0.00 0.00 3.16
3998 42511 2.225019 CCGGCATATTCAGATGAGTTGC 59.775 50.000 0.00 5.60 0.00 4.17
3999 42512 2.874086 CGGCATATTCAGATGAGTTGCA 59.126 45.455 12.64 0.00 0.00 4.08
4000 42513 3.059120 CGGCATATTCAGATGAGTTGCAG 60.059 47.826 12.64 7.37 0.00 4.41
4001 42514 3.881688 GGCATATTCAGATGAGTTGCAGT 59.118 43.478 12.64 0.00 0.00 4.40
4002 42515 4.024218 GGCATATTCAGATGAGTTGCAGTC 60.024 45.833 12.64 0.00 0.00 3.51
4003 42516 4.318618 GCATATTCAGATGAGTTGCAGTCG 60.319 45.833 8.13 0.00 0.00 4.18
4004 42517 2.084610 TTCAGATGAGTTGCAGTCGG 57.915 50.000 0.00 0.00 0.00 4.79
4005 42518 1.256812 TCAGATGAGTTGCAGTCGGA 58.743 50.000 0.00 0.00 0.00 4.55
4006 42519 1.203287 TCAGATGAGTTGCAGTCGGAG 59.797 52.381 0.00 0.00 0.00 4.63
4007 42520 1.203287 CAGATGAGTTGCAGTCGGAGA 59.797 52.381 0.00 0.00 0.00 3.71
4008 42521 1.476085 AGATGAGTTGCAGTCGGAGAG 59.524 52.381 0.00 0.00 36.95 3.20
4009 42522 1.474478 GATGAGTTGCAGTCGGAGAGA 59.526 52.381 0.00 0.00 36.95 3.10
4010 42523 1.328279 TGAGTTGCAGTCGGAGAGAA 58.672 50.000 0.00 0.00 36.95 2.87
4011 42524 1.270826 TGAGTTGCAGTCGGAGAGAAG 59.729 52.381 0.00 0.00 36.95 2.85
4012 42525 0.037790 AGTTGCAGTCGGAGAGAAGC 60.038 55.000 0.00 0.00 36.95 3.86
4013 42526 0.319900 GTTGCAGTCGGAGAGAAGCA 60.320 55.000 0.00 0.00 39.42 3.91
4014 42527 0.319900 TTGCAGTCGGAGAGAAGCAC 60.320 55.000 0.00 0.00 40.40 4.40
4015 42528 1.803519 GCAGTCGGAGAGAAGCACG 60.804 63.158 0.00 0.00 36.95 5.34
4016 42529 1.876664 CAGTCGGAGAGAAGCACGA 59.123 57.895 0.00 0.00 36.95 4.35
4017 42530 4.461784 GTCGGAGAGAAGCACGAC 57.538 61.111 0.00 0.00 46.89 4.34
4018 42531 1.512310 GTCGGAGAGAAGCACGACG 60.512 63.158 0.00 0.00 44.76 5.12
4019 42532 2.202492 CGGAGAGAAGCACGACGG 60.202 66.667 0.00 0.00 0.00 4.79
4020 42533 2.687805 CGGAGAGAAGCACGACGGA 61.688 63.158 0.00 0.00 0.00 4.69
4021 42534 1.153997 GGAGAGAAGCACGACGGAC 60.154 63.158 0.00 0.00 0.00 4.79
4022 42535 1.587933 GGAGAGAAGCACGACGGACT 61.588 60.000 0.00 0.00 0.00 3.85
4023 42536 0.455295 GAGAGAAGCACGACGGACTG 60.455 60.000 0.00 0.00 0.00 3.51
4024 42537 2.049063 AGAAGCACGACGGACTGC 60.049 61.111 0.00 0.00 0.00 4.40
4025 42538 3.470567 GAAGCACGACGGACTGCG 61.471 66.667 0.00 0.00 38.51 5.18
4026 42539 3.891586 GAAGCACGACGGACTGCGA 62.892 63.158 0.00 0.00 38.51 5.10
4027 42540 4.702081 AGCACGACGGACTGCGAC 62.702 66.667 0.00 0.00 38.51 5.19
4028 42541 4.702081 GCACGACGGACTGCGACT 62.702 66.667 0.00 0.00 0.00 4.18
4029 42542 2.502080 CACGACGGACTGCGACTC 60.502 66.667 0.00 0.00 0.00 3.36
4030 42543 2.668889 ACGACGGACTGCGACTCT 60.669 61.111 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 9.448438 AAAATAACATCAGTATAGCAGTTGTCA 57.552 29.630 0.00 0.00 0.00 3.58
137 6733 4.537945 ACAGTCTAACCTCAGGCCTATA 57.462 45.455 3.98 0.00 0.00 1.31
166 22593 0.912486 GCTGCTCTTCCCCCTAGAAA 59.088 55.000 0.00 0.00 0.00 2.52
386 32908 4.614475 TCTCTCTCTCTCTCTCTGTCTCT 58.386 47.826 0.00 0.00 0.00 3.10
391 32913 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
439 34241 1.076024 AGACCATGTCCAATGCCAACT 59.924 47.619 0.00 0.00 32.18 3.16
551 38514 1.071568 CGCGTTTTTGATTTGCACACC 60.072 47.619 0.00 0.00 0.00 4.16
552 38515 1.586123 ACGCGTTTTTGATTTGCACAC 59.414 42.857 5.58 0.00 0.00 3.82
588 38551 3.334691 CTTTAAATCCAGTGACGAGGCA 58.665 45.455 0.00 0.00 0.00 4.75
597 38560 2.171003 GCACCAGCCTTTAAATCCAGT 58.829 47.619 0.00 0.00 33.58 4.00
618 38581 3.220110 CATATATCCCATGCATCCAGCC 58.780 50.000 0.00 0.00 44.83 4.85
668 38631 4.733815 GCGAAGTTGAGACGGAAGATGATA 60.734 45.833 0.00 0.00 0.00 2.15
683 38646 1.873591 ACTAACCTGCAAGCGAAGTTG 59.126 47.619 0.00 0.00 0.00 3.16
692 38655 3.407698 CACATGTACCACTAACCTGCAA 58.592 45.455 0.00 0.00 0.00 4.08
954 38917 5.106791 GGCTTATCCTTGTTGATCGATGATG 60.107 44.000 0.54 0.00 0.00 3.07
1205 39169 3.350219 TCAAGTCCTTGCAAGGGATAC 57.650 47.619 38.60 30.05 46.47 2.24
1206 39170 3.523157 TCATCAAGTCCTTGCAAGGGATA 59.477 43.478 38.60 21.74 46.47 2.59
1229 39193 4.748102 AGCAATTCACTGTGAAATTGCTTG 59.252 37.500 35.38 29.23 46.36 4.01
1333 39297 2.310538 CCCAAATAGTCTCCCCATTGC 58.689 52.381 0.00 0.00 0.00 3.56
1440 39404 9.674824 TGCAAACAAATAAATTTAGCCAATTTG 57.325 25.926 16.47 16.47 43.68 2.32
1478 39442 9.147732 AGACACACATCAATAATATACCTCTGA 57.852 33.333 0.00 0.00 0.00 3.27
1479 39443 9.416794 GAGACACACATCAATAATATACCTCTG 57.583 37.037 0.00 0.00 0.00 3.35
1480 39444 8.300286 CGAGACACACATCAATAATATACCTCT 58.700 37.037 0.00 0.00 0.00 3.69
1481 39445 8.082852 ACGAGACACACATCAATAATATACCTC 58.917 37.037 0.00 0.00 0.00 3.85
1482 39446 7.867909 CACGAGACACACATCAATAATATACCT 59.132 37.037 0.00 0.00 0.00 3.08
1483 39447 7.865889 TCACGAGACACACATCAATAATATACC 59.134 37.037 0.00 0.00 0.00 2.73
1494 39460 3.246226 GGCATATTCACGAGACACACATC 59.754 47.826 0.00 0.00 0.00 3.06
1499 39465 6.480320 AGAAAATAGGCATATTCACGAGACAC 59.520 38.462 3.76 0.00 31.02 3.67
1548 39523 6.401394 CAGTCAAGTTCACAGGATTCATCTA 58.599 40.000 0.00 0.00 0.00 1.98
1886 39864 2.669364 CTACGTATTCCGGTGGCATAC 58.331 52.381 0.00 3.75 42.24 2.39
1915 39893 9.314501 GAACACGTCAAACTTCTTTGATATAAC 57.685 33.333 0.00 0.00 45.93 1.89
1985 39963 4.814234 GCATGTCAGAACAACGGGAATATA 59.186 41.667 0.00 0.00 39.30 0.86
2102 40170 4.391830 GTCCAGTTTTCGAATATGTGCAGA 59.608 41.667 0.00 0.00 0.00 4.26
2103 40171 4.437390 GGTCCAGTTTTCGAATATGTGCAG 60.437 45.833 0.00 0.00 0.00 4.41
2104 40172 3.438781 GGTCCAGTTTTCGAATATGTGCA 59.561 43.478 0.00 0.00 0.00 4.57
2105 40173 3.438781 TGGTCCAGTTTTCGAATATGTGC 59.561 43.478 0.00 0.00 0.00 4.57
2106 40174 5.818136 ATGGTCCAGTTTTCGAATATGTG 57.182 39.130 0.00 0.00 0.00 3.21
2107 40175 7.110155 ACTTATGGTCCAGTTTTCGAATATGT 58.890 34.615 0.00 0.00 0.00 2.29
2108 40176 7.553881 ACTTATGGTCCAGTTTTCGAATATG 57.446 36.000 0.00 0.00 0.00 1.78
2109 40177 8.575649 AAACTTATGGTCCAGTTTTCGAATAT 57.424 30.769 0.00 0.00 39.69 1.28
2110 40178 7.989416 AAACTTATGGTCCAGTTTTCGAATA 57.011 32.000 0.00 0.00 39.69 1.75
2111 40179 6.894339 AAACTTATGGTCCAGTTTTCGAAT 57.106 33.333 0.00 0.00 39.69 3.34
2112 40180 7.989416 ATAAACTTATGGTCCAGTTTTCGAA 57.011 32.000 11.70 0.00 39.69 3.71
2113 40181 7.989416 AATAAACTTATGGTCCAGTTTTCGA 57.011 32.000 11.70 0.00 39.69 3.71
2114 40182 7.540745 CCAAATAAACTTATGGTCCAGTTTTCG 59.459 37.037 11.70 1.63 39.69 3.46
2115 40183 7.817478 CCCAAATAAACTTATGGTCCAGTTTTC 59.183 37.037 11.70 0.00 39.69 2.29
2116 40184 7.511028 TCCCAAATAAACTTATGGTCCAGTTTT 59.489 33.333 11.70 4.61 39.69 2.43
2117 40185 7.013834 TCCCAAATAAACTTATGGTCCAGTTT 58.986 34.615 11.31 11.31 43.91 2.66
2118 40186 6.557568 TCCCAAATAAACTTATGGTCCAGTT 58.442 36.000 0.00 0.00 34.58 3.16
2119 40187 6.147437 TCCCAAATAAACTTATGGTCCAGT 57.853 37.500 0.00 0.00 0.00 4.00
2120 40188 6.187682 ACTCCCAAATAAACTTATGGTCCAG 58.812 40.000 0.00 0.00 0.00 3.86
2121 40189 6.147437 ACTCCCAAATAAACTTATGGTCCA 57.853 37.500 0.00 0.00 0.00 4.02
2122 40190 7.114095 TGTACTCCCAAATAAACTTATGGTCC 58.886 38.462 0.00 0.00 0.00 4.46
2123 40191 8.456471 GTTGTACTCCCAAATAAACTTATGGTC 58.544 37.037 0.00 0.00 0.00 4.02
2124 40192 8.168058 AGTTGTACTCCCAAATAAACTTATGGT 58.832 33.333 0.00 0.00 0.00 3.55
2125 40193 8.575649 AGTTGTACTCCCAAATAAACTTATGG 57.424 34.615 0.00 0.00 0.00 2.74
2135 40203 7.174426 GCAGTAAGTAAAGTTGTACTCCCAAAT 59.826 37.037 0.00 0.00 33.05 2.32
2141 40209 4.091075 GGCGCAGTAAGTAAAGTTGTACTC 59.909 45.833 10.83 0.00 33.05 2.59
2143 40211 3.742369 TGGCGCAGTAAGTAAAGTTGTAC 59.258 43.478 10.83 0.00 0.00 2.90
2145 40213 2.841215 TGGCGCAGTAAGTAAAGTTGT 58.159 42.857 10.83 0.00 0.00 3.32
2146 40214 3.747193 CATGGCGCAGTAAGTAAAGTTG 58.253 45.455 10.83 0.00 0.00 3.16
2154 40243 1.226491 GCAAGCATGGCGCAGTAAG 60.226 57.895 10.83 0.00 46.13 2.34
2304 40409 6.990349 TCCTTTATACAAGGCCTTTTATCTCG 59.010 38.462 24.22 14.31 37.34 4.04
2409 40514 0.399091 TCCCTCATGCCTACCTGGAG 60.399 60.000 0.00 0.00 38.35 3.86
2450 40558 2.201708 TGGCACCCAACACATGCAG 61.202 57.895 0.00 0.00 41.27 4.41
2452 40560 2.146073 GAGTGGCACCCAACACATGC 62.146 60.000 15.27 0.00 39.99 4.06
2453 40561 1.526575 GGAGTGGCACCCAACACATG 61.527 60.000 15.27 0.00 39.99 3.21
2454 40562 1.228552 GGAGTGGCACCCAACACAT 60.229 57.895 15.27 0.00 39.99 3.21
2455 40563 2.194597 GGAGTGGCACCCAACACA 59.805 61.111 15.27 0.00 39.99 3.72
2456 40564 1.600916 GAGGAGTGGCACCCAACAC 60.601 63.158 21.94 10.17 34.18 3.32
2457 40565 1.352622 AAGAGGAGTGGCACCCAACA 61.353 55.000 21.94 0.00 34.18 3.33
2458 40566 0.890996 CAAGAGGAGTGGCACCCAAC 60.891 60.000 21.94 16.19 34.18 3.77
2459 40567 1.352622 ACAAGAGGAGTGGCACCCAA 61.353 55.000 21.94 0.00 34.18 4.12
2460 40568 0.472925 TACAAGAGGAGTGGCACCCA 60.473 55.000 21.94 3.15 0.00 4.51
2461 40569 0.036294 GTACAAGAGGAGTGGCACCC 60.036 60.000 15.27 15.08 0.00 4.61
2462 40570 0.977395 AGTACAAGAGGAGTGGCACC 59.023 55.000 15.27 5.76 0.00 5.01
2463 40571 1.344763 ACAGTACAAGAGGAGTGGCAC 59.655 52.381 10.29 10.29 0.00 5.01
2491 40599 3.205338 ACTGGAAAACATTGGCAAAAGC 58.795 40.909 3.01 0.00 0.00 3.51
2492 40600 3.809279 GGACTGGAAAACATTGGCAAAAG 59.191 43.478 3.01 2.40 0.00 2.27
2535 40643 5.122396 ACAAGTTCAGACAGAAAACTGACAC 59.878 40.000 0.00 0.00 41.82 3.67
2576 40687 0.319555 TAGTGCGGCCGATAGCAATC 60.320 55.000 33.48 9.04 45.61 2.67
2577 40688 0.105964 TTAGTGCGGCCGATAGCAAT 59.894 50.000 33.48 19.17 45.61 3.56
2580 40691 1.069906 CAAATTAGTGCGGCCGATAGC 60.070 52.381 33.48 12.12 42.60 2.97
2590 40703 8.578769 CGAAAAGAAGAATAAGCAAATTAGTGC 58.421 33.333 0.00 0.00 45.28 4.40
2600 40713 5.689819 TCTGCAACGAAAAGAAGAATAAGC 58.310 37.500 0.00 0.00 0.00 3.09
2602 40715 7.490962 TTCTCTGCAACGAAAAGAAGAATAA 57.509 32.000 0.00 0.00 0.00 1.40
2604 40717 5.561725 GCTTCTCTGCAACGAAAAGAAGAAT 60.562 40.000 13.12 0.00 43.55 2.40
2754 40868 6.612306 GTGGTACTTGGTTTGATTCATCTTC 58.388 40.000 0.00 0.00 0.00 2.87
2760 40874 2.550606 TGCGTGGTACTTGGTTTGATTC 59.449 45.455 0.00 0.00 0.00 2.52
2919 41033 4.593634 TCAATCTCCTCATGATCAGATGCT 59.406 41.667 14.40 1.54 0.00 3.79
2925 41039 8.877195 TCTTGATAATCAATCTCCTCATGATCA 58.123 33.333 0.00 0.00 35.59 2.92
3006 41120 3.404224 TGGTCCGCTGTAACATAAACA 57.596 42.857 0.00 0.00 0.00 2.83
3076 41199 5.475220 TGAATTTAATCACCAACACGTCCAT 59.525 36.000 0.00 0.00 0.00 3.41
3119 41242 5.357742 AAGAGAAACACCCTTTTGCAAAT 57.642 34.783 13.65 0.00 0.00 2.32
3249 41372 3.694072 TGGACCCTTGCGATTATTTCTTG 59.306 43.478 0.00 0.00 0.00 3.02
3257 41380 2.442236 ATTGATGGACCCTTGCGATT 57.558 45.000 0.00 0.00 0.00 3.34
3271 41394 7.069085 ACACATATGCAAGCTTTCCTTATTGAT 59.931 33.333 1.58 0.00 31.00 2.57
3413 41926 0.179062 CTCATGCTACACCCTGAGGC 60.179 60.000 0.00 0.00 36.11 4.70
3419 41932 0.453390 GCTTTGCTCATGCTACACCC 59.547 55.000 0.00 0.00 40.48 4.61
3437 41950 1.678101 GGCACCCTGAGACAATAATGC 59.322 52.381 0.00 0.00 0.00 3.56
3442 41955 0.617413 CTGAGGCACCCTGAGACAAT 59.383 55.000 0.00 0.00 37.01 2.71
3443 41956 1.483595 CCTGAGGCACCCTGAGACAA 61.484 60.000 0.00 0.00 37.01 3.18
3444 41957 1.915266 CCTGAGGCACCCTGAGACA 60.915 63.158 0.00 0.00 37.01 3.41
3445 41958 2.664081 CCCTGAGGCACCCTGAGAC 61.664 68.421 0.00 0.00 37.01 3.36
3446 41959 2.284921 CCCTGAGGCACCCTGAGA 60.285 66.667 0.00 0.00 37.01 3.27
3447 41960 2.608988 ACCCTGAGGCACCCTGAG 60.609 66.667 0.00 0.00 34.63 3.35
3448 41961 2.930019 CACCCTGAGGCACCCTGA 60.930 66.667 0.00 0.00 36.11 3.86
3452 41965 4.416738 GAGGCACCCTGAGGCACC 62.417 72.222 0.00 0.00 36.11 5.01
3453 41966 3.618780 CTGAGGCACCCTGAGGCAC 62.619 68.421 0.00 0.00 31.20 5.01
3454 41967 3.324930 CTGAGGCACCCTGAGGCA 61.325 66.667 0.00 0.00 31.20 4.75
3457 41970 2.608988 ACCCTGAGGCACCCTGAG 60.609 66.667 0.00 0.00 34.63 3.35
3458 41971 2.930019 CACCCTGAGGCACCCTGA 60.930 66.667 0.00 0.00 36.11 3.86
3459 41972 4.729918 GCACCCTGAGGCACCCTG 62.730 72.222 0.00 0.00 36.11 4.45
3462 41975 4.416738 GAGGCACCCTGAGGCACC 62.417 72.222 0.00 0.00 36.11 5.01
3463 41976 3.618780 CTGAGGCACCCTGAGGCAC 62.619 68.421 0.00 0.00 31.20 5.01
3464 41977 3.324930 CTGAGGCACCCTGAGGCA 61.325 66.667 0.00 0.00 31.20 4.75
3465 41978 3.325753 ACTGAGGCACCCTGAGGC 61.326 66.667 0.00 0.00 39.18 4.70
3467 41980 0.109342 AAACACTGAGGCACCCTGAG 59.891 55.000 0.00 0.00 40.68 3.35
3469 41982 0.109342 AGAAACACTGAGGCACCCTG 59.891 55.000 0.00 0.00 31.76 4.45
3470 41983 1.348036 GTAGAAACACTGAGGCACCCT 59.652 52.381 0.00 0.00 36.03 4.34
3471 41984 1.610886 GGTAGAAACACTGAGGCACCC 60.611 57.143 0.00 0.00 0.00 4.61
3472 41985 1.071699 TGGTAGAAACACTGAGGCACC 59.928 52.381 0.00 0.00 0.00 5.01
3473 41986 2.543777 TGGTAGAAACACTGAGGCAC 57.456 50.000 0.00 0.00 0.00 5.01
3474 41987 2.637382 TGATGGTAGAAACACTGAGGCA 59.363 45.455 0.00 0.00 0.00 4.75
3475 41988 3.334583 TGATGGTAGAAACACTGAGGC 57.665 47.619 0.00 0.00 0.00 4.70
3476 41989 5.350504 AGATGATGGTAGAAACACTGAGG 57.649 43.478 0.00 0.00 0.00 3.86
3477 41990 5.064452 GCAAGATGATGGTAGAAACACTGAG 59.936 44.000 0.00 0.00 0.00 3.35
3478 41991 4.937620 GCAAGATGATGGTAGAAACACTGA 59.062 41.667 0.00 0.00 0.00 3.41
3479 41992 4.940046 AGCAAGATGATGGTAGAAACACTG 59.060 41.667 0.00 0.00 0.00 3.66
3480 41993 5.171339 AGCAAGATGATGGTAGAAACACT 57.829 39.130 0.00 0.00 0.00 3.55
3481 41994 6.109359 AGTAGCAAGATGATGGTAGAAACAC 58.891 40.000 0.00 0.00 34.24 3.32
3482 41995 6.070824 TGAGTAGCAAGATGATGGTAGAAACA 60.071 38.462 0.00 0.00 34.24 2.83
3483 41996 6.341316 TGAGTAGCAAGATGATGGTAGAAAC 58.659 40.000 0.00 0.00 34.24 2.78
3506 42019 5.577945 AGCATTCTGTTGTTCTTTTGTGTTG 59.422 36.000 0.00 0.00 0.00 3.33
3560 42073 6.151144 GTGTGCCCAAATCAGAGTTATTAGTT 59.849 38.462 0.00 0.00 0.00 2.24
3562 42075 5.647658 TGTGTGCCCAAATCAGAGTTATTAG 59.352 40.000 0.00 0.00 0.00 1.73
3569 42082 5.105635 ACAATAATGTGTGCCCAAATCAGAG 60.106 40.000 0.00 0.00 38.69 3.35
3605 42118 1.594331 AAGAGGGTGAAAAGCGACAC 58.406 50.000 0.00 0.00 36.44 3.67
3607 42120 2.479275 GTGTAAGAGGGTGAAAAGCGAC 59.521 50.000 0.00 0.00 0.00 5.19
3610 42123 1.804748 CCGTGTAAGAGGGTGAAAAGC 59.195 52.381 0.00 0.00 0.00 3.51
3639 42152 5.125900 TGGCAGCGATAGTAGTTTTGTAGTA 59.874 40.000 0.00 0.00 39.35 1.82
3649 42162 1.032794 TGAGGTGGCAGCGATAGTAG 58.967 55.000 11.51 0.00 39.35 2.57
3686 42199 6.360618 CAGGCTTTAGAATAGGGAAAGACAT 58.639 40.000 2.55 0.00 40.12 3.06
3695 42208 9.274206 GTAATTTACTCCAGGCTTTAGAATAGG 57.726 37.037 0.00 0.00 0.00 2.57
3716 42229 6.947464 TCTCCTAGCTAGTGCAAAAGTAATT 58.053 36.000 19.31 0.00 42.74 1.40
3718 42231 5.995565 TCTCCTAGCTAGTGCAAAAGTAA 57.004 39.130 19.31 0.00 42.74 2.24
3720 42233 4.383552 CCATCTCCTAGCTAGTGCAAAAGT 60.384 45.833 19.31 0.00 42.74 2.66
3721 42234 4.125703 CCATCTCCTAGCTAGTGCAAAAG 58.874 47.826 19.31 2.48 42.74 2.27
3722 42235 3.774766 TCCATCTCCTAGCTAGTGCAAAA 59.225 43.478 19.31 0.00 42.74 2.44
3723 42236 3.374764 TCCATCTCCTAGCTAGTGCAAA 58.625 45.455 19.31 1.00 42.74 3.68
3724 42237 3.032265 TCCATCTCCTAGCTAGTGCAA 57.968 47.619 19.31 2.73 42.74 4.08
3725 42238 2.755952 TCCATCTCCTAGCTAGTGCA 57.244 50.000 19.31 2.80 42.74 4.57
3726 42239 3.306641 CCATTCCATCTCCTAGCTAGTGC 60.307 52.174 19.31 0.00 40.05 4.40
3727 42240 3.900601 ACCATTCCATCTCCTAGCTAGTG 59.099 47.826 19.31 10.60 0.00 2.74
3728 42241 4.206244 ACCATTCCATCTCCTAGCTAGT 57.794 45.455 19.31 0.00 0.00 2.57
3729 42242 6.667414 AGATAACCATTCCATCTCCTAGCTAG 59.333 42.308 14.20 14.20 0.00 3.42
3730 42243 6.565974 AGATAACCATTCCATCTCCTAGCTA 58.434 40.000 0.00 0.00 0.00 3.32
3731 42244 5.410602 AGATAACCATTCCATCTCCTAGCT 58.589 41.667 0.00 0.00 0.00 3.32
3732 42245 5.753721 AGATAACCATTCCATCTCCTAGC 57.246 43.478 0.00 0.00 0.00 3.42
3733 42246 7.782897 TGTAGATAACCATTCCATCTCCTAG 57.217 40.000 0.00 0.00 31.60 3.02
3734 42247 7.400339 GGATGTAGATAACCATTCCATCTCCTA 59.600 40.741 0.00 0.00 31.60 2.94
3735 42248 6.214412 GGATGTAGATAACCATTCCATCTCCT 59.786 42.308 0.00 0.00 31.60 3.69
3736 42249 6.214412 AGGATGTAGATAACCATTCCATCTCC 59.786 42.308 0.00 0.00 31.60 3.71
3737 42250 7.251321 AGGATGTAGATAACCATTCCATCTC 57.749 40.000 0.00 0.00 31.60 2.75
3738 42251 7.734865 TGTAGGATGTAGATAACCATTCCATCT 59.265 37.037 0.00 0.00 33.66 2.90
3739 42252 7.907389 TGTAGGATGTAGATAACCATTCCATC 58.093 38.462 0.00 0.00 0.00 3.51
3740 42253 7.872061 TGTAGGATGTAGATAACCATTCCAT 57.128 36.000 0.00 0.00 0.00 3.41
3741 42254 7.202093 CCTTGTAGGATGTAGATAACCATTCCA 60.202 40.741 0.00 0.00 37.67 3.53
3742 42255 7.162082 CCTTGTAGGATGTAGATAACCATTCC 58.838 42.308 0.00 0.00 37.67 3.01
3743 42256 7.736893 ACCTTGTAGGATGTAGATAACCATTC 58.263 38.462 0.00 0.00 37.67 2.67
3744 42257 7.691993 ACCTTGTAGGATGTAGATAACCATT 57.308 36.000 0.00 0.00 37.67 3.16
3745 42258 7.038941 GCTACCTTGTAGGATGTAGATAACCAT 60.039 40.741 0.00 0.00 37.67 3.55
3746 42259 6.267014 GCTACCTTGTAGGATGTAGATAACCA 59.733 42.308 0.00 0.00 37.67 3.67
3747 42260 6.267014 TGCTACCTTGTAGGATGTAGATAACC 59.733 42.308 0.00 0.00 37.67 2.85
3748 42261 7.286215 TGCTACCTTGTAGGATGTAGATAAC 57.714 40.000 0.00 0.00 37.67 1.89
3749 42262 7.094334 CGATGCTACCTTGTAGGATGTAGATAA 60.094 40.741 12.18 0.00 37.67 1.75
3750 42263 6.374613 CGATGCTACCTTGTAGGATGTAGATA 59.625 42.308 12.18 0.00 37.67 1.98
3751 42264 5.184096 CGATGCTACCTTGTAGGATGTAGAT 59.816 44.000 12.18 0.00 37.67 1.98
3752 42265 4.519350 CGATGCTACCTTGTAGGATGTAGA 59.481 45.833 12.18 0.00 37.67 2.59
3753 42266 4.278669 ACGATGCTACCTTGTAGGATGTAG 59.721 45.833 12.18 6.87 37.67 2.74
3754 42267 4.212716 ACGATGCTACCTTGTAGGATGTA 58.787 43.478 12.18 0.00 37.67 2.29
3755 42268 3.031736 ACGATGCTACCTTGTAGGATGT 58.968 45.455 12.18 8.35 37.67 3.06
3756 42269 3.735237 ACGATGCTACCTTGTAGGATG 57.265 47.619 12.18 7.85 37.67 3.51
3757 42270 3.704566 TCAACGATGCTACCTTGTAGGAT 59.295 43.478 7.83 7.83 37.67 3.24
3758 42271 3.093814 TCAACGATGCTACCTTGTAGGA 58.906 45.455 0.00 0.88 37.67 2.94
3759 42272 3.520290 TCAACGATGCTACCTTGTAGG 57.480 47.619 3.65 0.00 42.49 3.18
3760 42273 5.459107 GTGTATCAACGATGCTACCTTGTAG 59.541 44.000 4.52 0.00 29.09 2.74
3761 42274 5.105675 TGTGTATCAACGATGCTACCTTGTA 60.106 40.000 4.52 0.00 29.09 2.41
3762 42275 4.181578 GTGTATCAACGATGCTACCTTGT 58.818 43.478 4.52 0.00 29.09 3.16
3763 42276 4.032900 GTGTGTATCAACGATGCTACCTTG 59.967 45.833 4.52 0.00 29.09 3.61
3764 42277 4.181578 GTGTGTATCAACGATGCTACCTT 58.818 43.478 4.52 0.00 29.09 3.50
3765 42278 3.194755 TGTGTGTATCAACGATGCTACCT 59.805 43.478 4.52 0.00 29.09 3.08
3766 42279 3.517602 TGTGTGTATCAACGATGCTACC 58.482 45.455 4.52 0.00 29.09 3.18
3767 42280 3.000322 GCTGTGTGTATCAACGATGCTAC 60.000 47.826 0.24 0.24 0.00 3.58
3768 42281 3.186909 GCTGTGTGTATCAACGATGCTA 58.813 45.455 0.00 0.00 0.00 3.49
3769 42282 2.002586 GCTGTGTGTATCAACGATGCT 58.997 47.619 0.00 0.00 0.00 3.79
3770 42283 1.731709 TGCTGTGTGTATCAACGATGC 59.268 47.619 0.00 0.00 0.00 3.91
3771 42284 2.736192 TGTGCTGTGTGTATCAACGATG 59.264 45.455 0.00 0.00 0.00 3.84
3772 42285 3.038788 TGTGCTGTGTGTATCAACGAT 57.961 42.857 0.00 0.00 0.00 3.73
3773 42286 2.517650 TGTGCTGTGTGTATCAACGA 57.482 45.000 0.00 0.00 0.00 3.85
3774 42287 2.096268 CCTTGTGCTGTGTGTATCAACG 60.096 50.000 0.00 0.00 0.00 4.10
3775 42288 2.350772 GCCTTGTGCTGTGTGTATCAAC 60.351 50.000 0.00 0.00 36.87 3.18
3776 42289 1.879380 GCCTTGTGCTGTGTGTATCAA 59.121 47.619 0.00 0.00 36.87 2.57
3777 42290 1.202746 TGCCTTGTGCTGTGTGTATCA 60.203 47.619 0.00 0.00 42.00 2.15
3778 42291 1.466167 CTGCCTTGTGCTGTGTGTATC 59.534 52.381 0.00 0.00 42.00 2.24
3779 42292 1.527034 CTGCCTTGTGCTGTGTGTAT 58.473 50.000 0.00 0.00 42.00 2.29
3780 42293 1.165907 GCTGCCTTGTGCTGTGTGTA 61.166 55.000 0.00 0.00 42.00 2.90
3781 42294 2.484062 GCTGCCTTGTGCTGTGTGT 61.484 57.895 0.00 0.00 42.00 3.72
3782 42295 1.731433 AAGCTGCCTTGTGCTGTGTG 61.731 55.000 0.00 0.00 42.00 3.82
3783 42296 1.039233 AAAGCTGCCTTGTGCTGTGT 61.039 50.000 0.00 0.00 42.00 3.72
3784 42297 0.318445 GAAAGCTGCCTTGTGCTGTG 60.318 55.000 0.00 0.00 42.00 3.66
3785 42298 0.466922 AGAAAGCTGCCTTGTGCTGT 60.467 50.000 0.00 0.00 42.00 4.40
3786 42299 0.039437 CAGAAAGCTGCCTTGTGCTG 60.039 55.000 0.00 0.00 42.00 4.41
3787 42300 0.179009 TCAGAAAGCTGCCTTGTGCT 60.179 50.000 3.45 0.00 42.01 4.40
3788 42301 0.240411 CTCAGAAAGCTGCCTTGTGC 59.760 55.000 3.45 0.00 42.01 4.57
3789 42302 1.602311 ACTCAGAAAGCTGCCTTGTG 58.398 50.000 1.97 1.97 42.01 3.33
3790 42303 1.952296 CAACTCAGAAAGCTGCCTTGT 59.048 47.619 0.00 0.00 42.01 3.16
3791 42304 1.335689 GCAACTCAGAAAGCTGCCTTG 60.336 52.381 0.00 0.00 40.53 3.61
3792 42305 0.957362 GCAACTCAGAAAGCTGCCTT 59.043 50.000 0.00 0.00 40.53 4.35
3793 42306 0.179009 TGCAACTCAGAAAGCTGCCT 60.179 50.000 0.00 0.00 44.83 4.75
3794 42307 0.886563 ATGCAACTCAGAAAGCTGCC 59.113 50.000 0.00 0.00 44.83 4.85
3795 42308 1.538512 TGATGCAACTCAGAAAGCTGC 59.461 47.619 0.00 0.00 45.50 5.25
3796 42309 3.909776 TTGATGCAACTCAGAAAGCTG 57.090 42.857 0.00 0.00 43.67 4.24
3797 42310 4.077108 TGATTGATGCAACTCAGAAAGCT 58.923 39.130 0.00 0.00 0.00 3.74
3798 42311 4.430137 TGATTGATGCAACTCAGAAAGC 57.570 40.909 0.00 0.00 0.00 3.51
3799 42312 7.561556 GTTTTTGATTGATGCAACTCAGAAAG 58.438 34.615 0.00 0.00 0.00 2.62
3800 42313 6.198778 CGTTTTTGATTGATGCAACTCAGAAA 59.801 34.615 0.00 0.00 0.00 2.52
3801 42314 5.686841 CGTTTTTGATTGATGCAACTCAGAA 59.313 36.000 0.00 0.00 0.00 3.02
3802 42315 5.214417 CGTTTTTGATTGATGCAACTCAGA 58.786 37.500 0.00 0.00 0.00 3.27
3803 42316 4.383649 CCGTTTTTGATTGATGCAACTCAG 59.616 41.667 0.00 0.00 0.00 3.35
3804 42317 4.037327 TCCGTTTTTGATTGATGCAACTCA 59.963 37.500 0.00 0.00 0.00 3.41
3805 42318 4.545610 TCCGTTTTTGATTGATGCAACTC 58.454 39.130 0.00 0.00 0.00 3.01
3806 42319 4.582701 TCCGTTTTTGATTGATGCAACT 57.417 36.364 0.00 0.00 0.00 3.16
3807 42320 5.061311 CAGATCCGTTTTTGATTGATGCAAC 59.939 40.000 0.00 0.00 0.00 4.17
3808 42321 5.048154 TCAGATCCGTTTTTGATTGATGCAA 60.048 36.000 0.00 0.00 0.00 4.08
3809 42322 4.458642 TCAGATCCGTTTTTGATTGATGCA 59.541 37.500 0.00 0.00 0.00 3.96
3810 42323 4.795278 GTCAGATCCGTTTTTGATTGATGC 59.205 41.667 0.00 0.00 0.00 3.91
3811 42324 6.128200 TGAGTCAGATCCGTTTTTGATTGATG 60.128 38.462 0.00 0.00 0.00 3.07
3812 42325 5.939883 TGAGTCAGATCCGTTTTTGATTGAT 59.060 36.000 0.00 0.00 0.00 2.57
3813 42326 5.304778 TGAGTCAGATCCGTTTTTGATTGA 58.695 37.500 0.00 0.00 0.00 2.57
3814 42327 5.611796 TGAGTCAGATCCGTTTTTGATTG 57.388 39.130 0.00 0.00 0.00 2.67
3815 42328 7.414540 GCTTATGAGTCAGATCCGTTTTTGATT 60.415 37.037 0.00 0.00 0.00 2.57
3816 42329 6.037610 GCTTATGAGTCAGATCCGTTTTTGAT 59.962 38.462 0.00 0.00 0.00 2.57
3817 42330 5.351465 GCTTATGAGTCAGATCCGTTTTTGA 59.649 40.000 0.00 0.00 0.00 2.69
3818 42331 5.447818 GGCTTATGAGTCAGATCCGTTTTTG 60.448 44.000 0.00 0.00 0.00 2.44
3819 42332 4.636206 GGCTTATGAGTCAGATCCGTTTTT 59.364 41.667 0.00 0.00 0.00 1.94
3820 42333 4.192317 GGCTTATGAGTCAGATCCGTTTT 58.808 43.478 0.00 0.00 0.00 2.43
3821 42334 3.197766 TGGCTTATGAGTCAGATCCGTTT 59.802 43.478 0.00 0.00 31.17 3.60
3822 42335 2.766263 TGGCTTATGAGTCAGATCCGTT 59.234 45.455 0.00 0.00 31.17 4.44
3823 42336 2.388735 TGGCTTATGAGTCAGATCCGT 58.611 47.619 0.00 0.00 31.17 4.69
3824 42337 3.459232 TTGGCTTATGAGTCAGATCCG 57.541 47.619 0.00 0.00 39.01 4.18
3825 42338 6.705863 AAATTTGGCTTATGAGTCAGATCC 57.294 37.500 0.00 0.00 39.01 3.36
3826 42339 6.474751 GCAAAATTTGGCTTATGAGTCAGATC 59.525 38.462 10.47 0.00 39.01 2.75
3827 42340 6.335777 GCAAAATTTGGCTTATGAGTCAGAT 58.664 36.000 10.47 0.00 39.01 2.90
3828 42341 5.713025 GCAAAATTTGGCTTATGAGTCAGA 58.287 37.500 10.47 0.00 39.01 3.27
3841 42354 3.745458 ACAGTTAATGCGGCAAAATTTGG 59.255 39.130 6.82 0.00 0.00 3.28
3842 42355 4.988708 ACAGTTAATGCGGCAAAATTTG 57.011 36.364 6.82 0.57 0.00 2.32
3843 42356 4.625311 GCTACAGTTAATGCGGCAAAATTT 59.375 37.500 6.82 0.00 32.19 1.82
3844 42357 4.173256 GCTACAGTTAATGCGGCAAAATT 58.827 39.130 6.82 0.00 32.19 1.82
3845 42358 3.192422 TGCTACAGTTAATGCGGCAAAAT 59.808 39.130 6.82 0.00 36.96 1.82
3846 42359 2.554462 TGCTACAGTTAATGCGGCAAAA 59.446 40.909 6.82 1.41 36.96 2.44
3847 42360 2.155279 TGCTACAGTTAATGCGGCAAA 58.845 42.857 6.82 0.00 36.96 3.68
3848 42361 1.814793 TGCTACAGTTAATGCGGCAA 58.185 45.000 6.82 0.00 36.96 4.52
3849 42362 1.466950 GTTGCTACAGTTAATGCGGCA 59.533 47.619 4.58 4.58 37.73 5.69
3850 42363 1.737793 AGTTGCTACAGTTAATGCGGC 59.262 47.619 0.13 0.00 0.00 6.53
3851 42364 3.000041 TCAGTTGCTACAGTTAATGCGG 59.000 45.455 0.13 0.00 0.00 5.69
3852 42365 4.568359 AGATCAGTTGCTACAGTTAATGCG 59.432 41.667 0.13 0.00 0.00 4.73
3853 42366 5.728898 GCAGATCAGTTGCTACAGTTAATGC 60.729 44.000 0.13 0.44 38.51 3.56
3854 42367 5.220739 GGCAGATCAGTTGCTACAGTTAATG 60.221 44.000 0.13 0.00 41.27 1.90
3855 42368 4.878397 GGCAGATCAGTTGCTACAGTTAAT 59.122 41.667 0.13 0.00 41.27 1.40
3856 42369 4.020218 AGGCAGATCAGTTGCTACAGTTAA 60.020 41.667 0.13 0.00 41.27 2.01
3857 42370 3.515502 AGGCAGATCAGTTGCTACAGTTA 59.484 43.478 0.13 0.00 41.27 2.24
3858 42371 2.304180 AGGCAGATCAGTTGCTACAGTT 59.696 45.455 0.13 0.00 41.27 3.16
3859 42372 1.905215 AGGCAGATCAGTTGCTACAGT 59.095 47.619 0.13 0.00 41.27 3.55
3860 42373 2.548875 GAGGCAGATCAGTTGCTACAG 58.451 52.381 0.13 0.00 41.27 2.74
3861 42374 1.208052 GGAGGCAGATCAGTTGCTACA 59.792 52.381 0.13 0.00 41.27 2.74
3862 42375 1.474143 GGGAGGCAGATCAGTTGCTAC 60.474 57.143 5.52 0.00 41.27 3.58
3863 42376 0.833287 GGGAGGCAGATCAGTTGCTA 59.167 55.000 5.52 0.00 41.27 3.49
3864 42377 1.606531 GGGAGGCAGATCAGTTGCT 59.393 57.895 5.52 0.00 41.27 3.91
3865 42378 1.452833 GGGGAGGCAGATCAGTTGC 60.453 63.158 0.00 0.00 40.80 4.17
3866 42379 0.329261 TTGGGGAGGCAGATCAGTTG 59.671 55.000 0.00 0.00 0.00 3.16
3867 42380 0.622665 CTTGGGGAGGCAGATCAGTT 59.377 55.000 0.00 0.00 0.00 3.16
3868 42381 0.548682 ACTTGGGGAGGCAGATCAGT 60.549 55.000 0.00 0.00 0.00 3.41
3869 42382 0.622665 AACTTGGGGAGGCAGATCAG 59.377 55.000 0.00 0.00 0.00 2.90
3870 42383 1.075601 AAACTTGGGGAGGCAGATCA 58.924 50.000 0.00 0.00 0.00 2.92
3871 42384 1.004745 TCAAACTTGGGGAGGCAGATC 59.995 52.381 0.00 0.00 0.00 2.75
3872 42385 1.075601 TCAAACTTGGGGAGGCAGAT 58.924 50.000 0.00 0.00 0.00 2.90
3873 42386 0.850100 TTCAAACTTGGGGAGGCAGA 59.150 50.000 0.00 0.00 0.00 4.26
3874 42387 1.703411 TTTCAAACTTGGGGAGGCAG 58.297 50.000 0.00 0.00 0.00 4.85
3875 42388 2.368221 CAATTTCAAACTTGGGGAGGCA 59.632 45.455 0.00 0.00 0.00 4.75
3876 42389 2.632512 TCAATTTCAAACTTGGGGAGGC 59.367 45.455 0.00 0.00 0.00 4.70
3877 42390 3.640967 TGTCAATTTCAAACTTGGGGAGG 59.359 43.478 0.00 0.00 0.00 4.30
3878 42391 4.501400 GGTGTCAATTTCAAACTTGGGGAG 60.501 45.833 0.00 0.00 0.00 4.30
3879 42392 3.386402 GGTGTCAATTTCAAACTTGGGGA 59.614 43.478 0.00 0.00 0.00 4.81
3880 42393 3.387699 AGGTGTCAATTTCAAACTTGGGG 59.612 43.478 0.00 0.00 0.00 4.96
3881 42394 4.670896 AGGTGTCAATTTCAAACTTGGG 57.329 40.909 0.00 0.00 0.00 4.12
3882 42395 6.633500 TCTAGGTGTCAATTTCAAACTTGG 57.367 37.500 0.00 0.00 0.00 3.61
3885 42398 9.349713 TGTTATTCTAGGTGTCAATTTCAAACT 57.650 29.630 0.00 0.00 0.00 2.66
3886 42399 9.394477 GTGTTATTCTAGGTGTCAATTTCAAAC 57.606 33.333 0.00 0.00 0.00 2.93
3887 42400 8.573035 GGTGTTATTCTAGGTGTCAATTTCAAA 58.427 33.333 0.00 0.00 0.00 2.69
3888 42401 7.942341 AGGTGTTATTCTAGGTGTCAATTTCAA 59.058 33.333 0.00 0.00 0.00 2.69
3889 42402 7.458397 AGGTGTTATTCTAGGTGTCAATTTCA 58.542 34.615 0.00 0.00 0.00 2.69
3890 42403 7.923414 AGGTGTTATTCTAGGTGTCAATTTC 57.077 36.000 0.00 0.00 0.00 2.17
3891 42404 8.706322 AAAGGTGTTATTCTAGGTGTCAATTT 57.294 30.769 0.00 0.00 0.00 1.82
3892 42405 8.576442 CAAAAGGTGTTATTCTAGGTGTCAATT 58.424 33.333 0.00 0.00 0.00 2.32
3893 42406 7.942341 TCAAAAGGTGTTATTCTAGGTGTCAAT 59.058 33.333 0.00 0.00 0.00 2.57
3894 42407 7.284074 TCAAAAGGTGTTATTCTAGGTGTCAA 58.716 34.615 0.00 0.00 0.00 3.18
3895 42408 6.833041 TCAAAAGGTGTTATTCTAGGTGTCA 58.167 36.000 0.00 0.00 0.00 3.58
3896 42409 7.739498 TTCAAAAGGTGTTATTCTAGGTGTC 57.261 36.000 0.00 0.00 0.00 3.67
3897 42410 7.942341 TGATTCAAAAGGTGTTATTCTAGGTGT 59.058 33.333 0.00 0.00 0.00 4.16
3898 42411 8.335532 TGATTCAAAAGGTGTTATTCTAGGTG 57.664 34.615 0.00 0.00 0.00 4.00
3899 42412 9.178758 GATGATTCAAAAGGTGTTATTCTAGGT 57.821 33.333 0.00 0.00 0.00 3.08
3900 42413 9.177608 TGATGATTCAAAAGGTGTTATTCTAGG 57.822 33.333 0.00 0.00 0.00 3.02
3902 42415 9.177608 CCTGATGATTCAAAAGGTGTTATTCTA 57.822 33.333 9.00 0.00 0.00 2.10
3903 42416 7.890127 TCCTGATGATTCAAAAGGTGTTATTCT 59.110 33.333 14.42 0.00 0.00 2.40
3904 42417 8.055279 TCCTGATGATTCAAAAGGTGTTATTC 57.945 34.615 14.42 0.00 0.00 1.75
3905 42418 8.421249 TTCCTGATGATTCAAAAGGTGTTATT 57.579 30.769 14.42 0.00 0.00 1.40
3906 42419 8.599624 ATTCCTGATGATTCAAAAGGTGTTAT 57.400 30.769 14.42 5.52 0.00 1.89
3907 42420 9.527157 TTATTCCTGATGATTCAAAAGGTGTTA 57.473 29.630 14.42 5.94 0.00 2.41
3908 42421 6.923199 ATTCCTGATGATTCAAAAGGTGTT 57.077 33.333 14.42 2.90 0.00 3.32
3909 42422 8.421249 TTTATTCCTGATGATTCAAAAGGTGT 57.579 30.769 14.42 9.08 0.00 4.16
3910 42423 7.977853 CCTTTATTCCTGATGATTCAAAAGGTG 59.022 37.037 14.42 4.04 38.70 4.00
3911 42424 7.675619 ACCTTTATTCCTGATGATTCAAAAGGT 59.324 33.333 16.63 16.63 45.07 3.50
3912 42425 8.071177 ACCTTTATTCCTGATGATTCAAAAGG 57.929 34.615 15.70 15.70 43.88 3.11
3913 42426 9.362539 CAACCTTTATTCCTGATGATTCAAAAG 57.637 33.333 0.00 0.00 30.01 2.27
3914 42427 9.087871 TCAACCTTTATTCCTGATGATTCAAAA 57.912 29.630 0.00 0.00 0.00 2.44
3915 42428 8.648698 TCAACCTTTATTCCTGATGATTCAAA 57.351 30.769 0.00 0.00 0.00 2.69
3916 42429 8.648698 TTCAACCTTTATTCCTGATGATTCAA 57.351 30.769 0.00 0.00 0.00 2.69
3917 42430 7.340232 CCTTCAACCTTTATTCCTGATGATTCA 59.660 37.037 0.00 0.00 0.00 2.57
3918 42431 7.557719 TCCTTCAACCTTTATTCCTGATGATTC 59.442 37.037 0.00 0.00 0.00 2.52
3919 42432 7.413446 TCCTTCAACCTTTATTCCTGATGATT 58.587 34.615 0.00 0.00 0.00 2.57
3920 42433 6.973642 TCCTTCAACCTTTATTCCTGATGAT 58.026 36.000 0.00 0.00 0.00 2.45
3921 42434 6.387192 TCCTTCAACCTTTATTCCTGATGA 57.613 37.500 0.00 0.00 0.00 2.92
3922 42435 5.591877 CCTCCTTCAACCTTTATTCCTGATG 59.408 44.000 0.00 0.00 0.00 3.07
3923 42436 5.760131 CCTCCTTCAACCTTTATTCCTGAT 58.240 41.667 0.00 0.00 0.00 2.90
3924 42437 4.567747 GCCTCCTTCAACCTTTATTCCTGA 60.568 45.833 0.00 0.00 0.00 3.86
3925 42438 3.696548 GCCTCCTTCAACCTTTATTCCTG 59.303 47.826 0.00 0.00 0.00 3.86
3926 42439 3.622455 CGCCTCCTTCAACCTTTATTCCT 60.622 47.826 0.00 0.00 0.00 3.36
3927 42440 2.683362 CGCCTCCTTCAACCTTTATTCC 59.317 50.000 0.00 0.00 0.00 3.01
3928 42441 3.606687 TCGCCTCCTTCAACCTTTATTC 58.393 45.455 0.00 0.00 0.00 1.75
3929 42442 3.009143 ACTCGCCTCCTTCAACCTTTATT 59.991 43.478 0.00 0.00 0.00 1.40
3930 42443 2.572104 ACTCGCCTCCTTCAACCTTTAT 59.428 45.455 0.00 0.00 0.00 1.40
3931 42444 1.975680 ACTCGCCTCCTTCAACCTTTA 59.024 47.619 0.00 0.00 0.00 1.85
3932 42445 0.765510 ACTCGCCTCCTTCAACCTTT 59.234 50.000 0.00 0.00 0.00 3.11
3933 42446 0.321996 GACTCGCCTCCTTCAACCTT 59.678 55.000 0.00 0.00 0.00 3.50
3934 42447 1.878656 CGACTCGCCTCCTTCAACCT 61.879 60.000 0.00 0.00 0.00 3.50
3935 42448 1.446272 CGACTCGCCTCCTTCAACC 60.446 63.158 0.00 0.00 0.00 3.77
3936 42449 1.446272 CCGACTCGCCTCCTTCAAC 60.446 63.158 0.00 0.00 0.00 3.18
3937 42450 1.183030 TTCCGACTCGCCTCCTTCAA 61.183 55.000 0.00 0.00 0.00 2.69
3938 42451 1.183030 TTTCCGACTCGCCTCCTTCA 61.183 55.000 0.00 0.00 0.00 3.02
3939 42452 0.736672 GTTTCCGACTCGCCTCCTTC 60.737 60.000 0.00 0.00 0.00 3.46
3940 42453 1.186267 AGTTTCCGACTCGCCTCCTT 61.186 55.000 0.00 0.00 31.20 3.36
3941 42454 1.596895 GAGTTTCCGACTCGCCTCCT 61.597 60.000 0.00 0.00 44.90 3.69
3942 42455 1.153804 GAGTTTCCGACTCGCCTCC 60.154 63.158 0.00 0.00 44.90 4.30
3943 42456 4.480031 GAGTTTCCGACTCGCCTC 57.520 61.111 0.00 0.00 44.90 4.70
3949 42462 3.553828 TTGGTTTCAGAGTTTCCGACT 57.446 42.857 0.00 0.00 42.70 4.18
3950 42463 4.830826 AATTGGTTTCAGAGTTTCCGAC 57.169 40.909 0.00 0.00 0.00 4.79
3951 42464 4.499019 GCAAATTGGTTTCAGAGTTTCCGA 60.499 41.667 0.00 0.00 0.00 4.55
3952 42465 3.735746 GCAAATTGGTTTCAGAGTTTCCG 59.264 43.478 0.00 0.00 0.00 4.30
3953 42466 4.692228 TGCAAATTGGTTTCAGAGTTTCC 58.308 39.130 0.00 0.00 0.00 3.13
3954 42467 5.006649 GGTTGCAAATTGGTTTCAGAGTTTC 59.993 40.000 0.00 0.00 0.00 2.78
3955 42468 4.875536 GGTTGCAAATTGGTTTCAGAGTTT 59.124 37.500 0.00 0.00 0.00 2.66
3956 42469 4.441792 GGTTGCAAATTGGTTTCAGAGTT 58.558 39.130 0.00 0.00 0.00 3.01
3957 42470 3.490761 CGGTTGCAAATTGGTTTCAGAGT 60.491 43.478 0.00 0.00 0.00 3.24
3958 42471 3.052036 CGGTTGCAAATTGGTTTCAGAG 58.948 45.455 0.00 0.00 0.00 3.35
3959 42472 2.223923 CCGGTTGCAAATTGGTTTCAGA 60.224 45.455 0.00 0.00 0.00 3.27
3960 42473 2.134346 CCGGTTGCAAATTGGTTTCAG 58.866 47.619 0.00 0.00 0.00 3.02
3961 42474 1.808133 GCCGGTTGCAAATTGGTTTCA 60.808 47.619 0.00 0.00 40.77 2.69
3962 42475 0.865111 GCCGGTTGCAAATTGGTTTC 59.135 50.000 0.00 0.00 40.77 2.78
3963 42476 2.999356 GCCGGTTGCAAATTGGTTT 58.001 47.368 0.00 0.00 40.77 3.27
3964 42477 4.769047 GCCGGTTGCAAATTGGTT 57.231 50.000 0.00 0.00 40.77 3.67
3973 42486 2.221169 TCATCTGAATATGCCGGTTGC 58.779 47.619 1.90 0.00 41.77 4.17
3974 42487 3.470709 ACTCATCTGAATATGCCGGTTG 58.529 45.455 1.90 0.00 0.00 3.77
3975 42488 3.845781 ACTCATCTGAATATGCCGGTT 57.154 42.857 1.90 0.00 0.00 4.44
3976 42489 3.470709 CAACTCATCTGAATATGCCGGT 58.529 45.455 1.90 0.00 0.00 5.28
3977 42490 2.225019 GCAACTCATCTGAATATGCCGG 59.775 50.000 0.00 0.00 0.00 6.13
3978 42491 2.874086 TGCAACTCATCTGAATATGCCG 59.126 45.455 8.25 0.00 0.00 5.69
3979 42492 3.881688 ACTGCAACTCATCTGAATATGCC 59.118 43.478 0.00 0.00 0.00 4.40
3980 42493 4.318618 CGACTGCAACTCATCTGAATATGC 60.319 45.833 0.00 0.00 0.00 3.14
3981 42494 4.210746 CCGACTGCAACTCATCTGAATATG 59.789 45.833 0.00 0.00 0.00 1.78
3982 42495 4.100035 TCCGACTGCAACTCATCTGAATAT 59.900 41.667 0.00 0.00 0.00 1.28
3983 42496 3.447229 TCCGACTGCAACTCATCTGAATA 59.553 43.478 0.00 0.00 0.00 1.75
3984 42497 2.234661 TCCGACTGCAACTCATCTGAAT 59.765 45.455 0.00 0.00 0.00 2.57
3985 42498 1.618343 TCCGACTGCAACTCATCTGAA 59.382 47.619 0.00 0.00 0.00 3.02
3986 42499 1.203287 CTCCGACTGCAACTCATCTGA 59.797 52.381 0.00 0.00 0.00 3.27
3987 42500 1.203287 TCTCCGACTGCAACTCATCTG 59.797 52.381 0.00 0.00 0.00 2.90
3988 42501 1.476085 CTCTCCGACTGCAACTCATCT 59.524 52.381 0.00 0.00 0.00 2.90
3989 42502 1.474478 TCTCTCCGACTGCAACTCATC 59.526 52.381 0.00 0.00 0.00 2.92
3990 42503 1.550327 TCTCTCCGACTGCAACTCAT 58.450 50.000 0.00 0.00 0.00 2.90
3991 42504 1.270826 CTTCTCTCCGACTGCAACTCA 59.729 52.381 0.00 0.00 0.00 3.41
3992 42505 1.989430 CTTCTCTCCGACTGCAACTC 58.011 55.000 0.00 0.00 0.00 3.01
3993 42506 0.037790 GCTTCTCTCCGACTGCAACT 60.038 55.000 0.00 0.00 0.00 3.16
3994 42507 0.319900 TGCTTCTCTCCGACTGCAAC 60.320 55.000 0.00 0.00 31.25 4.17
3995 42508 0.319900 GTGCTTCTCTCCGACTGCAA 60.320 55.000 0.00 0.00 34.53 4.08
3996 42509 1.290324 GTGCTTCTCTCCGACTGCA 59.710 57.895 0.00 0.00 0.00 4.41
3997 42510 1.803519 CGTGCTTCTCTCCGACTGC 60.804 63.158 0.00 0.00 0.00 4.40
3998 42511 0.455295 GTCGTGCTTCTCTCCGACTG 60.455 60.000 0.00 0.00 44.55 3.51
3999 42512 1.877367 GTCGTGCTTCTCTCCGACT 59.123 57.895 0.00 0.00 44.55 4.18
4000 42513 1.512310 CGTCGTGCTTCTCTCCGAC 60.512 63.158 0.00 0.00 44.51 4.79
4001 42514 2.687805 CCGTCGTGCTTCTCTCCGA 61.688 63.158 0.00 0.00 0.00 4.55
4002 42515 2.202492 CCGTCGTGCTTCTCTCCG 60.202 66.667 0.00 0.00 0.00 4.63
4003 42516 1.153997 GTCCGTCGTGCTTCTCTCC 60.154 63.158 0.00 0.00 0.00 3.71
4004 42517 0.455295 CAGTCCGTCGTGCTTCTCTC 60.455 60.000 0.00 0.00 0.00 3.20
4005 42518 1.581954 CAGTCCGTCGTGCTTCTCT 59.418 57.895 0.00 0.00 0.00 3.10
4006 42519 2.089349 GCAGTCCGTCGTGCTTCTC 61.089 63.158 0.00 0.00 36.71 2.87
4007 42520 2.049063 GCAGTCCGTCGTGCTTCT 60.049 61.111 0.00 0.00 36.71 2.85
4008 42521 3.470567 CGCAGTCCGTCGTGCTTC 61.471 66.667 5.00 0.00 37.55 3.86
4009 42522 3.973516 TCGCAGTCCGTCGTGCTT 61.974 61.111 5.00 0.00 37.55 3.91
4010 42523 4.702081 GTCGCAGTCCGTCGTGCT 62.702 66.667 5.00 0.00 37.55 4.40
4011 42524 4.702081 AGTCGCAGTCCGTCGTGC 62.702 66.667 0.00 0.00 38.35 5.34
4012 42525 2.502080 GAGTCGCAGTCCGTCGTG 60.502 66.667 0.00 0.00 38.35 4.35
4013 42526 2.668889 AGAGTCGCAGTCCGTCGT 60.669 61.111 0.00 0.00 38.35 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.