Multiple sequence alignment - TraesCS2A01G023500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G023500 chr2A 100.000 7606 0 0 1 7606 11543031 11550636 0.000000e+00 14046.0
1 TraesCS2A01G023500 chr2A 75.000 2064 420 69 4275 6287 2376069 2374051 0.000000e+00 865.0
2 TraesCS2A01G023500 chr2A 88.980 245 19 5 296 533 11543087 11543330 5.770000e-76 296.0
3 TraesCS2A01G023500 chr2A 88.980 245 19 5 57 300 11543326 11543563 5.770000e-76 296.0
4 TraesCS2A01G023500 chr2A 98.148 54 1 0 1873 1926 122630557 122630504 2.260000e-15 95.3
5 TraesCS2A01G023500 chr2A 84.507 71 11 0 758 828 89122854 89122784 3.810000e-08 71.3
6 TraesCS2A01G023500 chr2A 89.091 55 4 2 688 741 672454283 672454230 4.930000e-07 67.6
7 TraesCS2A01G023500 chr2D 93.456 2888 144 9 3926 6793 10869120 10871982 0.000000e+00 4244.0
8 TraesCS2A01G023500 chr2D 93.103 2436 125 19 1 2418 10866617 10869027 0.000000e+00 3528.0
9 TraesCS2A01G023500 chr2D 74.137 2057 438 63 4275 6280 2548839 2550852 0.000000e+00 765.0
10 TraesCS2A01G023500 chr2D 83.645 428 41 16 6895 7294 10872040 10872466 7.210000e-100 375.0
11 TraesCS2A01G023500 chr2D 90.164 244 18 2 296 533 10866673 10866916 5.730000e-81 313.0
12 TraesCS2A01G023500 chr2D 89.344 244 20 2 57 300 10866912 10867149 1.240000e-77 302.0
13 TraesCS2A01G023500 chr2D 92.982 114 7 1 6786 6899 333646183 333646071 1.700000e-36 165.0
14 TraesCS2A01G023500 chr2D 90.909 110 10 0 6788 6897 121000999 121000890 1.710000e-31 148.0
15 TraesCS2A01G023500 chr2B 88.346 2068 225 15 4229 6291 16127311 16125255 0.000000e+00 2470.0
16 TraesCS2A01G023500 chr2B 84.228 2105 298 19 4257 6356 16266682 16268757 0.000000e+00 2017.0
17 TraesCS2A01G023500 chr2B 91.086 875 58 2 965 1834 16129109 16128250 0.000000e+00 1166.0
18 TraesCS2A01G023500 chr2B 78.741 842 127 26 991 1826 16262028 16262823 4.070000e-142 516.0
19 TraesCS2A01G023500 chr2B 91.333 300 26 0 1 300 199010190 199010489 1.980000e-110 411.0
20 TraesCS2A01G023500 chr2B 88.608 316 26 6 292 600 199010243 199010555 7.210000e-100 375.0
21 TraesCS2A01G023500 chr2B 86.694 248 23 3 7064 7308 16269364 16269604 4.520000e-67 267.0
22 TraesCS2A01G023500 chr2B 92.727 110 8 0 6788 6897 346655501 346655610 7.900000e-35 159.0
23 TraesCS2A01G023500 chr2B 90.826 109 10 0 6788 6896 174395875 174395767 6.150000e-31 147.0
24 TraesCS2A01G023500 chr2B 90.164 61 5 1 292 352 682223230 682223289 2.280000e-10 78.7
25 TraesCS2A01G023500 chr2B 92.453 53 4 0 689 741 56605804 56605752 8.180000e-10 76.8
26 TraesCS2A01G023500 chr2B 93.617 47 2 1 688 734 249534139 249534184 1.370000e-07 69.4
27 TraesCS2A01G023500 chr5A 97.026 1446 40 3 2444 3888 601201833 601200390 0.000000e+00 2429.0
28 TraesCS2A01G023500 chr5A 96.760 1389 44 1 2493 3881 577720048 577718661 0.000000e+00 2314.0
29 TraesCS2A01G023500 chr5A 83.857 223 32 4 3 223 410215829 410215609 7.730000e-50 209.0
30 TraesCS2A01G023500 chr5A 90.984 122 9 2 6788 6907 436331129 436331008 6.110000e-36 163.0
31 TraesCS2A01G023500 chr7A 95.182 1453 53 3 2444 3881 18984840 18983390 0.000000e+00 2279.0
32 TraesCS2A01G023500 chr7A 94.517 1459 62 4 2444 3885 161219934 161218477 0.000000e+00 2235.0
33 TraesCS2A01G023500 chr7A 89.655 116 10 2 6786 6900 510632247 510632133 6.150000e-31 147.0
34 TraesCS2A01G023500 chr7A 82.558 86 11 4 757 839 403360783 403360867 1.060000e-08 73.1
35 TraesCS2A01G023500 chr4A 94.387 1461 64 4 2438 3882 555208047 555209505 0.000000e+00 2228.0
36 TraesCS2A01G023500 chr4A 93.875 1453 71 4 2444 3881 548543016 548544465 0.000000e+00 2174.0
37 TraesCS2A01G023500 chr4A 95.375 1146 40 3 2744 3885 641512070 641510934 0.000000e+00 1810.0
38 TraesCS2A01G023500 chr4A 90.826 109 10 0 6792 6900 691250594 691250702 6.150000e-31 147.0
39 TraesCS2A01G023500 chr4A 87.037 108 13 1 6791 6897 742987980 742987873 3.730000e-23 121.0
40 TraesCS2A01G023500 chr4A 84.348 115 16 2 6788 6901 56171536 56171423 2.240000e-20 111.0
41 TraesCS2A01G023500 chr4A 98.148 54 1 0 1873 1926 532693709 532693656 2.260000e-15 95.3
42 TraesCS2A01G023500 chr4A 94.828 58 3 0 1869 1926 620470544 620470601 2.920000e-14 91.6
43 TraesCS2A01G023500 chr6A 94.591 1442 53 2 2444 3885 116945077 116943661 0.000000e+00 2207.0
44 TraesCS2A01G023500 chr6A 91.717 1159 91 2 2727 3881 506420812 506419655 0.000000e+00 1604.0
45 TraesCS2A01G023500 chr6A 85.417 192 27 1 296 486 609665941 609665750 1.670000e-46 198.0
46 TraesCS2A01G023500 chr6A 90.826 109 10 0 6788 6896 17739897 17740005 6.150000e-31 147.0
47 TraesCS2A01G023500 chr6A 84.348 115 15 3 6788 6900 349230851 349230964 8.070000e-20 110.0
48 TraesCS2A01G023500 chr6A 95.000 60 2 1 1868 1926 115319537 115319478 8.130000e-15 93.5
49 TraesCS2A01G023500 chr6A 96.774 31 1 0 3 33 609665912 609665882 1.400000e-02 52.8
50 TraesCS2A01G023500 chr1A 93.797 1467 71 4 2434 3884 8132720 8134182 0.000000e+00 2187.0
51 TraesCS2A01G023500 chr1A 94.393 1409 62 3 2437 3829 29008523 29007116 0.000000e+00 2148.0
52 TraesCS2A01G023500 chr1A 82.171 258 34 8 292 549 550900646 550900891 2.150000e-50 211.0
53 TraesCS2A01G023500 chr1A 84.615 208 31 1 6 212 542762362 542762155 1.000000e-48 206.0
54 TraesCS2A01G023500 chr3D 93.712 827 50 2 3052 3877 500633444 500634269 0.000000e+00 1238.0
55 TraesCS2A01G023500 chr3D 82.398 784 117 16 3103 3882 452369487 452368721 0.000000e+00 664.0
56 TraesCS2A01G023500 chr3D 94.828 58 3 0 1869 1926 251316008 251316065 2.920000e-14 91.6
57 TraesCS2A01G023500 chr3D 97.297 37 1 0 691 727 89926886 89926922 6.370000e-06 63.9
58 TraesCS2A01G023500 chr1B 77.064 2132 383 64 4275 6356 4896340 4898415 0.000000e+00 1131.0
59 TraesCS2A01G023500 chr1B 88.596 114 9 4 6786 6897 388145370 388145259 1.330000e-27 135.0
60 TraesCS2A01G023500 chr1B 88.288 111 12 1 6788 6897 217722642 217722532 1.720000e-26 132.0
61 TraesCS2A01G023500 chr6B 91.848 552 13 7 3988 4529 91893086 91893615 0.000000e+00 741.0
62 TraesCS2A01G023500 chr6B 81.538 260 47 1 3 261 30252149 30252408 5.980000e-51 213.0
63 TraesCS2A01G023500 chr6B 92.079 101 8 0 6797 6897 418070408 418070308 7.960000e-30 143.0
64 TraesCS2A01G023500 chrUn 82.713 752 114 13 3135 3882 154635103 154634364 0.000000e+00 654.0
65 TraesCS2A01G023500 chrUn 90.826 109 10 0 6792 6900 1997223 1997115 6.150000e-31 147.0
66 TraesCS2A01G023500 chrUn 88.542 96 11 0 6786 6881 128599003 128599098 4.820000e-22 117.0
67 TraesCS2A01G023500 chrUn 84.762 105 15 1 6797 6900 399069435 399069331 3.750000e-18 104.0
68 TraesCS2A01G023500 chrUn 83.784 111 17 1 6788 6897 467735028 467735138 3.750000e-18 104.0
69 TraesCS2A01G023500 chrUn 84.762 105 15 1 6797 6900 474544579 474544475 3.750000e-18 104.0
70 TraesCS2A01G023500 chrUn 83.186 113 18 1 6788 6899 33028184 33028296 1.350000e-17 102.0
71 TraesCS2A01G023500 chr7B 80.679 766 127 18 3124 3882 734055977 734056728 6.620000e-160 575.0
72 TraesCS2A01G023500 chr7B 82.800 250 38 2 5 253 581388573 581388328 1.290000e-52 219.0
73 TraesCS2A01G023500 chr7B 81.959 194 28 3 295 487 122494182 122493995 2.840000e-34 158.0
74 TraesCS2A01G023500 chr7B 89.623 106 11 0 6792 6897 362058546 362058651 1.330000e-27 135.0
75 TraesCS2A01G023500 chr7B 88.182 110 11 2 6788 6896 246291177 246291285 6.190000e-26 130.0
76 TraesCS2A01G023500 chr7D 84.541 207 31 1 292 498 29889164 29888959 3.600000e-48 204.0
77 TraesCS2A01G023500 chr5D 82.039 206 35 2 296 500 167048838 167048634 2.820000e-39 174.0
78 TraesCS2A01G023500 chr5D 87.387 111 13 1 6788 6897 444300361 444300471 8.010000e-25 126.0
79 TraesCS2A01G023500 chr5D 90.000 70 4 3 1858 1926 332041804 332041737 3.780000e-13 87.9
80 TraesCS2A01G023500 chr5D 93.478 46 2 1 689 734 84901899 84901943 4.930000e-07 67.6
81 TraesCS2A01G023500 chr5B 82.383 193 27 3 3 194 45028009 45027823 2.200000e-35 161.0
82 TraesCS2A01G023500 chr5B 87.156 109 13 1 6791 6898 594747101 594746993 1.040000e-23 122.0
83 TraesCS2A01G023500 chr5B 95.556 45 1 1 691 735 250564999 250565042 3.810000e-08 71.3
84 TraesCS2A01G023500 chr5B 95.349 43 2 0 760 802 145023775 145023817 1.370000e-07 69.4
85 TraesCS2A01G023500 chr5B 88.462 52 5 1 689 740 448891924 448891874 2.290000e-05 62.1
86 TraesCS2A01G023500 chr5B 85.965 57 6 2 686 741 588660924 588660869 8.240000e-05 60.2
87 TraesCS2A01G023500 chr4B 85.841 113 14 2 6786 6897 585203465 585203354 1.340000e-22 119.0
88 TraesCS2A01G023500 chr4B 85.217 115 16 1 6788 6901 97922034 97922148 4.820000e-22 117.0
89 TraesCS2A01G023500 chr4B 85.217 115 15 2 6786 6899 647029933 647030046 4.820000e-22 117.0
90 TraesCS2A01G023500 chr4B 87.755 98 11 1 6788 6884 185966943 185967040 6.240000e-21 113.0
91 TraesCS2A01G023500 chr4B 83.929 112 16 2 6788 6898 311014021 311014131 1.040000e-18 106.0
92 TraesCS2A01G023500 chr6D 92.208 77 6 0 6788 6864 244685838 244685762 8.070000e-20 110.0
93 TraesCS2A01G023500 chr6D 92.208 77 6 0 6788 6864 268605000 268605076 8.070000e-20 110.0
94 TraesCS2A01G023500 chr6D 84.337 83 10 2 6818 6898 184844236 184844155 2.280000e-10 78.7
95 TraesCS2A01G023500 chr6D 87.931 58 6 1 6842 6898 286135152 286135209 4.930000e-07 67.6
96 TraesCS2A01G023500 chr6D 87.931 58 6 1 6842 6898 344543548 344543605 4.930000e-07 67.6
97 TraesCS2A01G023500 chr6D 96.875 32 1 0 6788 6819 71522411 71522442 4.000000e-03 54.7
98 TraesCS2A01G023500 chr4D 92.208 77 6 0 6788 6864 116480646 116480570 8.070000e-20 110.0
99 TraesCS2A01G023500 chr4D 95.238 42 2 0 6858 6899 104986252 104986211 4.930000e-07 67.6
100 TraesCS2A01G023500 chr4D 87.931 58 6 1 6842 6898 116315813 116315756 4.930000e-07 67.6
101 TraesCS2A01G023500 chr4D 95.238 42 2 0 6858 6899 310685200 310685159 4.930000e-07 67.6
102 TraesCS2A01G023500 chr4D 95.238 42 2 0 6858 6899 389389100 389389059 4.930000e-07 67.6
103 TraesCS2A01G023500 chr4D 95.238 42 2 0 6858 6899 427873914 427873955 4.930000e-07 67.6
104 TraesCS2A01G023500 chr4D 87.931 58 6 1 6842 6898 489942417 489942360 4.930000e-07 67.6
105 TraesCS2A01G023500 chr4D 92.857 42 3 0 6858 6899 78116005 78115964 2.290000e-05 62.1
106 TraesCS2A01G023500 chr4D 92.857 42 3 0 6858 6899 301485995 301486036 2.290000e-05 62.1
107 TraesCS2A01G023500 chr4D 92.857 42 3 0 6858 6899 375198155 375198114 2.290000e-05 62.1
108 TraesCS2A01G023500 chr1D 84.545 110 16 1 6791 6899 442675631 442675522 2.900000e-19 108.0
109 TraesCS2A01G023500 chr1D 85.542 83 11 1 6817 6898 136002444 136002362 1.360000e-12 86.1
110 TraesCS2A01G023500 chr1D 96.000 50 2 0 6788 6837 150244155 150244204 1.760000e-11 82.4
111 TraesCS2A01G023500 chr1D 89.831 59 5 1 6842 6899 368091042 368091100 2.940000e-09 75.0
112 TraesCS2A01G023500 chr1D 87.931 58 6 1 6842 6898 383877849 383877792 4.930000e-07 67.6
113 TraesCS2A01G023500 chr1D 100.000 28 0 0 6788 6815 313295257 313295230 1.400000e-02 52.8
114 TraesCS2A01G023500 chr3B 90.625 64 6 0 1863 1926 45782742 45782679 1.360000e-12 86.1
115 TraesCS2A01G023500 chr3B 88.732 71 6 1 1856 1926 156882476 156882408 1.360000e-12 86.1
116 TraesCS2A01G023500 chr3B 83.529 85 14 0 741 825 27086737 27086821 6.330000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G023500 chr2A 11543031 11550636 7605 False 14046.000000 14046 100.0000 1 7606 1 chr2A.!!$F1 7605
1 TraesCS2A01G023500 chr2A 2374051 2376069 2018 True 865.000000 865 75.0000 4275 6287 1 chr2A.!!$R1 2012
2 TraesCS2A01G023500 chr2D 10866617 10872466 5849 False 1752.400000 4244 89.9424 1 7294 5 chr2D.!!$F2 7293
3 TraesCS2A01G023500 chr2D 2548839 2550852 2013 False 765.000000 765 74.1370 4275 6280 1 chr2D.!!$F1 2005
4 TraesCS2A01G023500 chr2B 16125255 16129109 3854 True 1818.000000 2470 89.7160 965 6291 2 chr2B.!!$R3 5326
5 TraesCS2A01G023500 chr2B 16262028 16269604 7576 False 933.333333 2017 83.2210 991 7308 3 chr2B.!!$F4 6317
6 TraesCS2A01G023500 chr5A 601200390 601201833 1443 True 2429.000000 2429 97.0260 2444 3888 1 chr5A.!!$R4 1444
7 TraesCS2A01G023500 chr5A 577718661 577720048 1387 True 2314.000000 2314 96.7600 2493 3881 1 chr5A.!!$R3 1388
8 TraesCS2A01G023500 chr7A 18983390 18984840 1450 True 2279.000000 2279 95.1820 2444 3881 1 chr7A.!!$R1 1437
9 TraesCS2A01G023500 chr7A 161218477 161219934 1457 True 2235.000000 2235 94.5170 2444 3885 1 chr7A.!!$R2 1441
10 TraesCS2A01G023500 chr4A 555208047 555209505 1458 False 2228.000000 2228 94.3870 2438 3882 1 chr4A.!!$F2 1444
11 TraesCS2A01G023500 chr4A 548543016 548544465 1449 False 2174.000000 2174 93.8750 2444 3881 1 chr4A.!!$F1 1437
12 TraesCS2A01G023500 chr4A 641510934 641512070 1136 True 1810.000000 1810 95.3750 2744 3885 1 chr4A.!!$R3 1141
13 TraesCS2A01G023500 chr6A 116943661 116945077 1416 True 2207.000000 2207 94.5910 2444 3885 1 chr6A.!!$R2 1441
14 TraesCS2A01G023500 chr6A 506419655 506420812 1157 True 1604.000000 1604 91.7170 2727 3881 1 chr6A.!!$R3 1154
15 TraesCS2A01G023500 chr1A 8132720 8134182 1462 False 2187.000000 2187 93.7970 2434 3884 1 chr1A.!!$F1 1450
16 TraesCS2A01G023500 chr1A 29007116 29008523 1407 True 2148.000000 2148 94.3930 2437 3829 1 chr1A.!!$R1 1392
17 TraesCS2A01G023500 chr3D 500633444 500634269 825 False 1238.000000 1238 93.7120 3052 3877 1 chr3D.!!$F3 825
18 TraesCS2A01G023500 chr3D 452368721 452369487 766 True 664.000000 664 82.3980 3103 3882 1 chr3D.!!$R1 779
19 TraesCS2A01G023500 chr1B 4896340 4898415 2075 False 1131.000000 1131 77.0640 4275 6356 1 chr1B.!!$F1 2081
20 TraesCS2A01G023500 chr6B 91893086 91893615 529 False 741.000000 741 91.8480 3988 4529 1 chr6B.!!$F2 541
21 TraesCS2A01G023500 chrUn 154634364 154635103 739 True 654.000000 654 82.7130 3135 3882 1 chrUn.!!$R2 747
22 TraesCS2A01G023500 chr7B 734055977 734056728 751 False 575.000000 575 80.6790 3124 3882 1 chr7B.!!$F3 758

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
944 966 0.607489 AGCACACCACAATCAGAGCC 60.607 55.0 0.00 0.00 0.00 4.70 F
1648 1681 0.037326 TCAAGTCGCCGAGCAATTCT 60.037 50.0 0.00 0.00 0.00 2.40 F
2303 5571 0.943835 CGTGGTGATTGACGCTGTCA 60.944 55.0 7.20 7.20 41.09 3.58 F
3536 6824 0.250166 AGAAACCTGGCACGGTACAC 60.250 55.0 8.70 4.77 34.48 2.90 F
4164 7550 0.930726 TTGGACCAAAACAGGGGACT 59.069 50.0 3.84 0.00 46.44 3.85 F
4724 8160 1.093159 GTCTGCCTGGCAATTCTCTG 58.907 55.0 23.51 9.16 38.41 3.35 F
5787 9244 0.317160 TCACGATCAAGGCGACAACT 59.683 50.0 0.00 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2303 5571 1.109323 GCCGCCAGAAATAGCCCAAT 61.109 55.000 0.00 0.00 0.00 3.16 R
3276 6562 1.287191 CGCCGTCATCCGATCATCT 59.713 57.895 0.00 0.00 39.56 2.90 R
3677 6980 2.831685 TACCAAACAGACATCGCAGT 57.168 45.000 0.00 0.00 0.00 4.40 R
4790 8226 0.387929 CTTCGGCTAACCATCGGCTA 59.612 55.000 0.00 0.00 34.57 3.93 R
5059 8510 0.764890 ACCGATACCATGTCCCATGG 59.235 55.000 19.19 19.19 44.54 3.66 R
6414 9940 0.318441 TCAAACAGAGAGCGAGGTGG 59.682 55.000 0.00 0.00 0.00 4.61 R
7310 10950 0.032952 GCTCGCCCGTACATCCATTA 59.967 55.000 0.00 0.00 0.00 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 6.809689 TGTGTACAATCTGAATACGGTGTTAG 59.190 38.462 0.00 0.00 0.00 2.34
123 124 6.476378 AGTTTTAGTCAATAGTGCACCATCT 58.524 36.000 14.63 1.58 0.00 2.90
163 164 2.787723 GCCGATACGTGTTGCAAATGAG 60.788 50.000 0.00 0.00 0.00 2.90
182 183 4.346730 TGAGCACCTCATCAAAATCCAAT 58.653 39.130 0.00 0.00 35.39 3.16
239 240 1.337354 TGCCTCGACGAAACATAGCAA 60.337 47.619 0.00 0.00 0.00 3.91
285 286 7.073208 TGATGAGGTGTGATTATTAGGGTCTA 58.927 38.462 0.00 0.00 0.00 2.59
286 287 6.978674 TGAGGTGTGATTATTAGGGTCTAG 57.021 41.667 0.00 0.00 0.00 2.43
372 373 1.880027 GTGCACCATCCGTCTTTTTCT 59.120 47.619 5.22 0.00 0.00 2.52
408 409 3.981211 ACATGTTGCAAATGAACACCTC 58.019 40.909 20.96 0.25 36.18 3.85
409 410 3.384146 ACATGTTGCAAATGAACACCTCA 59.616 39.130 20.96 5.36 36.18 3.86
475 476 1.199789 GCATGCCTCGACAAAACATCA 59.800 47.619 6.36 0.00 0.00 3.07
476 477 2.159338 GCATGCCTCGACAAAACATCAT 60.159 45.455 6.36 0.00 0.00 2.45
481 482 3.681594 GCCTCGACAAAACATCATAGGGA 60.682 47.826 0.00 0.00 0.00 4.20
537 538 8.279970 TGTTCTTGAGTCATAATTATTGGGTG 57.720 34.615 0.00 0.00 0.00 4.61
561 562 3.254903 GGGGTGTTTCGTATTGCTTTCTT 59.745 43.478 0.00 0.00 0.00 2.52
590 591 5.786311 ACAACGTACAGACCTTTATGCTAA 58.214 37.500 0.00 0.00 0.00 3.09
673 685 3.073798 TGTTGTCTCCCATGCTTTTAGGA 59.926 43.478 0.00 0.00 0.00 2.94
684 696 2.293170 GCTTTTAGGATGGCCAGAGAC 58.707 52.381 13.05 0.51 36.29 3.36
695 707 4.048970 TGGCCAGAGACTTAACTACTCT 57.951 45.455 0.00 0.00 40.94 3.24
704 716 3.269178 ACTTAACTACTCTCTCCGTCCG 58.731 50.000 0.00 0.00 0.00 4.79
716 728 2.564062 TCTCCGTCCGGAAATACTTGTT 59.436 45.455 5.23 0.00 44.66 2.83
717 729 2.928116 CTCCGTCCGGAAATACTTGTTC 59.072 50.000 5.23 0.00 44.66 3.18
823 835 8.359875 TCATTTATTGGGCAAGTATTTTCAGA 57.640 30.769 0.00 0.00 0.00 3.27
824 836 8.250332 TCATTTATTGGGCAAGTATTTTCAGAC 58.750 33.333 0.00 0.00 0.00 3.51
825 837 7.531857 TTTATTGGGCAAGTATTTTCAGACA 57.468 32.000 0.00 0.00 0.00 3.41
826 838 5.649782 ATTGGGCAAGTATTTTCAGACAG 57.350 39.130 0.00 0.00 0.00 3.51
827 839 4.365514 TGGGCAAGTATTTTCAGACAGA 57.634 40.909 0.00 0.00 0.00 3.41
828 840 4.326826 TGGGCAAGTATTTTCAGACAGAG 58.673 43.478 0.00 0.00 0.00 3.35
829 841 3.127721 GGGCAAGTATTTTCAGACAGAGC 59.872 47.826 0.00 0.00 0.00 4.09
835 848 7.623089 GCAAGTATTTTCAGACAGAGCAAGTAG 60.623 40.741 0.00 0.00 0.00 2.57
840 853 4.511617 TCAGACAGAGCAAGTAGTTGAG 57.488 45.455 14.64 3.18 35.46 3.02
869 882 1.729470 CGGTCATCTCTCACGGAGGG 61.729 65.000 1.76 0.00 42.10 4.30
930 952 2.918248 AGCAACCTGGTGAGCACA 59.082 55.556 21.80 0.00 0.00 4.57
931 953 1.526917 AGCAACCTGGTGAGCACAC 60.527 57.895 21.80 5.63 45.27 3.82
941 963 1.882912 GTGAGCACACCACAATCAGA 58.117 50.000 2.45 0.00 40.74 3.27
942 964 1.802960 GTGAGCACACCACAATCAGAG 59.197 52.381 2.45 0.00 40.74 3.35
943 965 0.801251 GAGCACACCACAATCAGAGC 59.199 55.000 0.00 0.00 0.00 4.09
944 966 0.607489 AGCACACCACAATCAGAGCC 60.607 55.000 0.00 0.00 0.00 4.70
945 967 0.890542 GCACACCACAATCAGAGCCA 60.891 55.000 0.00 0.00 0.00 4.75
946 968 1.830279 CACACCACAATCAGAGCCAT 58.170 50.000 0.00 0.00 0.00 4.40
947 969 2.940971 GCACACCACAATCAGAGCCATA 60.941 50.000 0.00 0.00 0.00 2.74
948 970 2.941064 CACACCACAATCAGAGCCATAG 59.059 50.000 0.00 0.00 0.00 2.23
949 971 2.573462 ACACCACAATCAGAGCCATAGT 59.427 45.455 0.00 0.00 0.00 2.12
950 972 3.201290 CACCACAATCAGAGCCATAGTC 58.799 50.000 0.00 0.00 0.00 2.59
951 973 2.840038 ACCACAATCAGAGCCATAGTCA 59.160 45.455 0.00 0.00 0.00 3.41
952 974 3.457380 ACCACAATCAGAGCCATAGTCAT 59.543 43.478 0.00 0.00 0.00 3.06
953 975 4.063689 CCACAATCAGAGCCATAGTCATC 58.936 47.826 0.00 0.00 0.00 2.92
954 976 4.443881 CCACAATCAGAGCCATAGTCATCA 60.444 45.833 0.00 0.00 0.00 3.07
955 977 5.121105 CACAATCAGAGCCATAGTCATCAA 58.879 41.667 0.00 0.00 0.00 2.57
956 978 5.587443 CACAATCAGAGCCATAGTCATCAAA 59.413 40.000 0.00 0.00 0.00 2.69
957 979 5.587844 ACAATCAGAGCCATAGTCATCAAAC 59.412 40.000 0.00 0.00 0.00 2.93
958 980 4.142609 TCAGAGCCATAGTCATCAAACC 57.857 45.455 0.00 0.00 0.00 3.27
959 981 3.519107 TCAGAGCCATAGTCATCAAACCA 59.481 43.478 0.00 0.00 0.00 3.67
960 982 3.624861 CAGAGCCATAGTCATCAAACCAC 59.375 47.826 0.00 0.00 0.00 4.16
961 983 3.264193 AGAGCCATAGTCATCAAACCACA 59.736 43.478 0.00 0.00 0.00 4.17
1098 1125 2.938956 ACAAGGAGTTGAAGGACCTG 57.061 50.000 0.00 0.00 37.10 4.00
1212 1239 3.245911 TGGAGATCCTATCCATGGAGGAG 60.246 52.174 23.18 19.83 45.03 3.69
1648 1681 0.037326 TCAAGTCGCCGAGCAATTCT 60.037 50.000 0.00 0.00 0.00 2.40
1718 1751 1.449246 CCAAGGAGGCGCTCTTGAG 60.449 63.158 27.17 18.26 0.00 3.02
1801 1834 2.467962 CTCCAGCAGCATGTCAGTG 58.532 57.895 0.00 0.00 39.31 3.66
1864 1897 7.068103 TGTTCCCAGCTATGGTATTTGTATTTG 59.932 37.037 1.67 0.00 46.10 2.32
1918 2186 7.916450 ACTTGTCTTAGATTTGTCTAGATACGC 59.084 37.037 0.00 0.00 0.00 4.42
2021 3209 7.040409 CCCCATCAGTTTAGCCAAATCTTATAC 60.040 40.741 0.00 0.00 0.00 1.47
2114 3508 7.066284 CCAATGCATCAGCTAGTTAAAAGTAGT 59.934 37.037 0.00 0.00 42.74 2.73
2117 3511 8.029642 TGCATCAGCTAGTTAAAAGTAGTTTC 57.970 34.615 0.00 0.00 42.74 2.78
2135 3529 7.974501 AGTAGTTTCCATGAACTAATCAGTACG 59.025 37.037 8.21 0.00 42.10 3.67
2204 3727 1.607628 CTTGCTCCTGATTAGGCATGC 59.392 52.381 9.90 9.90 44.22 4.06
2214 3737 3.709141 TGATTAGGCATGCACAGTACCTA 59.291 43.478 21.36 6.76 31.79 3.08
2303 5571 0.943835 CGTGGTGATTGACGCTGTCA 60.944 55.000 7.20 7.20 41.09 3.58
2355 5629 6.368791 GCAAATGAGTTTCCCTGGAAATTAAC 59.631 38.462 14.08 2.85 44.52 2.01
2393 5667 9.788960 CTGCAAAGGGATTTACTAAAAATAGAC 57.211 33.333 0.00 0.00 0.00 2.59
2416 5690 9.561069 AGACAACTCATAACATTTGTAGAGTTT 57.439 29.630 16.71 11.62 39.99 2.66
2435 5709 4.728058 TTTTTGCTGCGCCAAGTC 57.272 50.000 4.18 0.00 0.00 3.01
2436 5710 1.067250 TTTTTGCTGCGCCAAGTCC 59.933 52.632 4.18 0.00 0.00 3.85
2437 5711 2.362329 TTTTTGCTGCGCCAAGTCCC 62.362 55.000 4.18 0.00 0.00 4.46
2643 5918 2.997315 CCCTCGTGGTGGCTCTCA 60.997 66.667 2.33 0.00 0.00 3.27
3536 6824 0.250166 AGAAACCTGGCACGGTACAC 60.250 55.000 8.70 4.77 34.48 2.90
3621 6924 3.379445 CGCCGGACTGGTAGGTGT 61.379 66.667 5.05 0.00 41.21 4.16
3677 6980 7.311092 TCAGGTCTTAGATGTTTAGGTTTGA 57.689 36.000 0.00 0.00 0.00 2.69
3877 7185 5.519808 GGGGTCATCCTCCTTTTCTAAAAT 58.480 41.667 0.00 0.00 35.33 1.82
3977 7351 5.973565 CGAATTTTCCTGCAAATATGAGACC 59.026 40.000 0.00 0.00 0.00 3.85
4074 7459 1.913778 TTCAGTAGGCGTAGTCACCA 58.086 50.000 0.00 0.00 0.00 4.17
4148 7534 4.764823 TGAGTAGTTGGCTTGGTAATTTGG 59.235 41.667 0.00 0.00 0.00 3.28
4149 7535 4.993028 AGTAGTTGGCTTGGTAATTTGGA 58.007 39.130 0.00 0.00 0.00 3.53
4150 7536 4.765339 AGTAGTTGGCTTGGTAATTTGGAC 59.235 41.667 0.00 0.00 0.00 4.02
4151 7537 2.897326 AGTTGGCTTGGTAATTTGGACC 59.103 45.455 0.00 0.00 37.49 4.46
4152 7538 2.630580 GTTGGCTTGGTAATTTGGACCA 59.369 45.455 0.00 0.00 45.38 4.02
4159 7545 4.946478 TGGTAATTTGGACCAAAACAGG 57.054 40.909 23.11 0.00 44.08 4.00
4160 7546 3.643792 TGGTAATTTGGACCAAAACAGGG 59.356 43.478 23.11 0.00 44.08 4.45
4161 7547 3.007506 GGTAATTTGGACCAAAACAGGGG 59.992 47.826 23.11 0.00 36.90 4.79
4162 7548 2.785357 ATTTGGACCAAAACAGGGGA 57.215 45.000 23.11 0.00 36.90 4.81
4163 7549 1.783071 TTTGGACCAAAACAGGGGAC 58.217 50.000 17.47 0.00 29.89 4.46
4164 7550 0.930726 TTGGACCAAAACAGGGGACT 59.069 50.000 3.84 0.00 46.44 3.85
4165 7551 0.930726 TGGACCAAAACAGGGGACTT 59.069 50.000 0.00 0.00 40.21 3.01
4166 7552 1.289530 TGGACCAAAACAGGGGACTTT 59.710 47.619 0.00 0.00 40.21 2.66
4167 7553 2.292587 TGGACCAAAACAGGGGACTTTT 60.293 45.455 0.00 0.00 40.21 2.27
4168 7554 2.769663 GGACCAAAACAGGGGACTTTTT 59.230 45.455 0.00 0.00 41.94 1.94
4169 7555 3.962063 GGACCAAAACAGGGGACTTTTTA 59.038 43.478 0.00 0.00 39.34 1.52
4239 7666 4.006780 ACAAAGCCAATTCCAAATGACC 57.993 40.909 0.00 0.00 0.00 4.02
4553 7983 1.556911 AGATGTGATGGTCACCCACTC 59.443 52.381 7.55 1.27 46.40 3.51
4626 8059 3.008375 TCTCTGTGAAGAAATGACCCAGG 59.992 47.826 0.00 0.00 0.00 4.45
4724 8160 1.093159 GTCTGCCTGGCAATTCTCTG 58.907 55.000 23.51 9.16 38.41 3.35
4790 8226 4.503991 CCAGTCAGCAGGAAAACTCTTACT 60.504 45.833 0.00 0.00 0.00 2.24
4872 8323 5.052481 TGGATGAGCTAATCGACAGAAATG 58.948 41.667 4.91 0.00 0.00 2.32
5005 8456 4.469657 ACATCTTTTGGTGCTAAGAACCA 58.530 39.130 0.00 0.00 46.01 3.67
5192 8646 2.735237 CGCCCCCGATCTCTAACC 59.265 66.667 0.00 0.00 36.29 2.85
5420 8877 7.487822 TGACTTGAGGAAGACAAAGATAGAT 57.512 36.000 0.00 0.00 32.01 1.98
5759 9216 6.400568 TCATCTGAATGATTTTTCCAAAGGC 58.599 36.000 0.00 0.00 36.98 4.35
5772 9229 1.401931 CCAAAGGCTTGCTTCATCACG 60.402 52.381 0.00 0.00 0.00 4.35
5787 9244 0.317160 TCACGATCAAGGCGACAACT 59.683 50.000 0.00 0.00 0.00 3.16
5855 9330 0.694771 AAGGCAGCCTGAATCAGTCA 59.305 50.000 17.05 0.00 32.13 3.41
5872 9347 3.753272 CAGTCACCTCAGTTTGTTATGGG 59.247 47.826 0.00 0.00 0.00 4.00
5975 9450 5.036117 AGCTCTTGGTTTGTCTCAAACTA 57.964 39.130 19.78 13.94 0.00 2.24
6000 9475 3.181494 TGAAGTCGATCTCGCCGATTTAA 60.181 43.478 0.00 0.00 36.39 1.52
6160 9638 8.514594 TCTTTGTGATGACATAAAAGTGGAATC 58.485 33.333 13.40 0.00 36.86 2.52
6264 9742 1.607467 CCCAAGAGGCCAAGGGTTG 60.607 63.158 5.01 0.24 36.52 3.77
6306 9790 6.370718 GGTTGATCCAACTAAAACTATGTCGT 59.629 38.462 9.34 0.00 43.14 4.34
6316 9800 9.769093 AACTAAAACTATGTCGTTGAAATATGC 57.231 29.630 0.00 0.00 0.00 3.14
6341 9825 2.875933 CTCCCGCAAAGTCTACAACAAA 59.124 45.455 0.00 0.00 0.00 2.83
6369 9895 3.941657 GACACTCCGCAGACCAGGC 62.942 68.421 0.00 0.00 0.00 4.85
6414 9940 2.892425 CCCGCGAGCAATCTCCAC 60.892 66.667 8.23 0.00 35.94 4.02
6441 9967 3.990469 TCGCTCTCTGTTTGATCAAGTTC 59.010 43.478 8.41 4.58 0.00 3.01
6465 9995 0.257328 TTGCAGTGGACCAGGTTTGA 59.743 50.000 0.00 0.00 0.00 2.69
6490 10020 5.711506 ACATTTCTCATATTGTTGCCTGTCA 59.288 36.000 0.00 0.00 0.00 3.58
6498 10057 8.065473 TCATATTGTTGCCTGTCATTGTTTAT 57.935 30.769 0.00 0.00 0.00 1.40
6502 10061 5.218885 TGTTGCCTGTCATTGTTTATTTCG 58.781 37.500 0.00 0.00 0.00 3.46
6525 10084 6.091577 TCGCAATAACGTTATTCATGTTCTGT 59.908 34.615 26.65 3.57 36.01 3.41
6527 10086 7.369800 CGCAATAACGTTATTCATGTTCTGTAC 59.630 37.037 26.65 5.57 36.01 2.90
6532 10091 6.845302 ACGTTATTCATGTTCTGTACGACTA 58.155 36.000 0.00 0.00 0.00 2.59
6538 10122 7.869016 TTCATGTTCTGTACGACTAAAGAAG 57.131 36.000 0.00 0.00 29.64 2.85
6594 10195 6.148948 CCTCAGATGTCGAAGATACAGAATC 58.851 44.000 0.00 0.00 40.67 2.52
6599 10200 6.773200 AGATGTCGAAGATACAGAATCTACCA 59.227 38.462 0.00 0.00 44.56 3.25
6692 10295 3.703052 GGTAAGGTTCGACATAAGGAGGA 59.297 47.826 0.00 0.00 0.00 3.71
6694 10297 2.389715 AGGTTCGACATAAGGAGGAGG 58.610 52.381 0.00 0.00 0.00 4.30
6695 10298 2.108970 GGTTCGACATAAGGAGGAGGT 58.891 52.381 0.00 0.00 0.00 3.85
6699 10302 0.105039 GACATAAGGAGGAGGTGCGG 59.895 60.000 0.00 0.00 0.00 5.69
6700 10303 1.227674 CATAAGGAGGAGGTGCGGC 60.228 63.158 0.00 0.00 0.00 6.53
6701 10304 1.689233 ATAAGGAGGAGGTGCGGCA 60.689 57.895 0.00 0.00 0.00 5.69
6743 10346 0.681733 TCTCAGGCTGTCCAGTCAAC 59.318 55.000 15.27 0.00 34.98 3.18
6748 10351 0.681733 GGCTGTCCAGTCAACTCAGA 59.318 55.000 0.00 0.00 32.23 3.27
6768 10371 6.283694 TCAGATTCTGAATAAATCTCCACCG 58.716 40.000 13.96 0.00 40.61 4.94
6797 10400 3.840831 CAGATGCTTCTGTCCGGAA 57.159 52.632 18.96 0.00 43.73 4.30
6798 10401 2.099141 CAGATGCTTCTGTCCGGAAA 57.901 50.000 18.96 0.00 43.73 3.13
6801 10404 3.557595 CAGATGCTTCTGTCCGGAAATAC 59.442 47.826 18.96 0.00 43.73 1.89
6802 10405 3.452627 AGATGCTTCTGTCCGGAAATACT 59.547 43.478 5.23 0.00 0.00 2.12
6803 10406 3.695830 TGCTTCTGTCCGGAAATACTT 57.304 42.857 5.23 0.00 0.00 2.24
6805 10408 3.244422 TGCTTCTGTCCGGAAATACTTGT 60.244 43.478 5.23 0.00 0.00 3.16
6810 10413 4.401519 TCTGTCCGGAAATACTTGTCCTAG 59.598 45.833 5.23 0.00 0.00 3.02
6811 10414 4.346730 TGTCCGGAAATACTTGTCCTAGA 58.653 43.478 5.23 0.00 0.00 2.43
6813 10416 5.246656 TGTCCGGAAATACTTGTCCTAGAAA 59.753 40.000 5.23 0.00 0.00 2.52
6814 10417 6.070424 TGTCCGGAAATACTTGTCCTAGAAAT 60.070 38.462 5.23 0.00 0.00 2.17
6815 10418 6.479331 GTCCGGAAATACTTGTCCTAGAAATC 59.521 42.308 5.23 0.00 0.00 2.17
6816 10419 5.462398 CCGGAAATACTTGTCCTAGAAATCG 59.538 44.000 0.00 0.00 0.00 3.34
6817 10420 5.462398 CGGAAATACTTGTCCTAGAAATCGG 59.538 44.000 0.00 0.00 0.00 4.18
6818 10421 6.346896 GGAAATACTTGTCCTAGAAATCGGT 58.653 40.000 0.00 0.00 0.00 4.69
6820 10423 5.934402 ATACTTGTCCTAGAAATCGGTGT 57.066 39.130 0.00 0.00 0.00 4.16
6821 10424 7.414222 AATACTTGTCCTAGAAATCGGTGTA 57.586 36.000 0.00 0.00 0.00 2.90
6825 10428 6.832384 ACTTGTCCTAGAAATCGGTGTATCTA 59.168 38.462 0.00 0.00 0.00 1.98
6826 10429 6.879276 TGTCCTAGAAATCGGTGTATCTAG 57.121 41.667 6.49 6.49 40.55 2.43
6827 10430 6.598503 TGTCCTAGAAATCGGTGTATCTAGA 58.401 40.000 12.58 0.00 42.48 2.43
6828 10431 6.485984 TGTCCTAGAAATCGGTGTATCTAGAC 59.514 42.308 12.58 9.91 42.48 2.59
6830 10433 7.229106 GTCCTAGAAATCGGTGTATCTAGACTT 59.771 40.741 12.58 0.00 42.48 3.01
6831 10434 8.435187 TCCTAGAAATCGGTGTATCTAGACTTA 58.565 37.037 12.58 0.00 42.48 2.24
6832 10435 9.233649 CCTAGAAATCGGTGTATCTAGACTTAT 57.766 37.037 12.58 0.00 42.48 1.73
6887 10490 8.712285 TTTATAAGACAAGTATTTCTGGACGG 57.288 34.615 0.00 0.00 0.00 4.79
6888 10491 4.884668 AAGACAAGTATTTCTGGACGGA 57.115 40.909 0.00 0.00 0.00 4.69
6889 10492 4.457834 AGACAAGTATTTCTGGACGGAG 57.542 45.455 0.00 0.00 0.00 4.63
6890 10493 3.195825 AGACAAGTATTTCTGGACGGAGG 59.804 47.826 0.00 0.00 0.00 4.30
6891 10494 2.236395 ACAAGTATTTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
6892 10495 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
6893 10496 2.389715 AGTATTTCTGGACGGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
6900 10503 5.329191 TTCTGGACGGAGGGAGTATTATA 57.671 43.478 0.00 0.00 0.00 0.98
6902 10505 5.900437 TCTGGACGGAGGGAGTATTATAAT 58.100 41.667 2.97 2.97 0.00 1.28
6915 10518 7.038231 GGGAGTATTATAATGTCACCTAAGGCT 60.038 40.741 8.28 0.00 0.00 4.58
6917 10520 7.162082 AGTATTATAATGTCACCTAAGGCTGC 58.838 38.462 8.28 0.00 0.00 5.25
6940 10543 4.142687 CGCTTGGATTATCGTGTTTCCTTT 60.143 41.667 0.00 0.00 0.00 3.11
6976 10580 1.890625 TATACACGCCCCTGCACGTT 61.891 55.000 0.00 0.00 41.32 3.99
6977 10581 3.750077 TATACACGCCCCTGCACGTTC 62.750 57.143 0.00 0.00 41.32 3.95
6987 10591 1.458064 CCTGCACGTTCGTATCGTTTT 59.542 47.619 0.00 0.00 39.55 2.43
6988 10592 2.482235 CTGCACGTTCGTATCGTTTTG 58.518 47.619 0.00 0.00 39.55 2.44
6989 10593 1.859703 TGCACGTTCGTATCGTTTTGT 59.140 42.857 0.00 0.00 39.55 2.83
7003 10607 2.393764 GTTTTGTGCCGGAAATCACTG 58.606 47.619 5.05 0.00 34.49 3.66
7007 10611 2.852449 TGTGCCGGAAATCACTGTAAA 58.148 42.857 5.05 0.00 34.49 2.01
7008 10612 3.215151 TGTGCCGGAAATCACTGTAAAA 58.785 40.909 5.05 0.00 34.49 1.52
7010 10614 3.252458 GTGCCGGAAATCACTGTAAAACT 59.748 43.478 5.05 0.00 0.00 2.66
7014 10618 5.123344 GCCGGAAATCACTGTAAAACTGTAT 59.877 40.000 5.05 0.00 0.00 2.29
7015 10619 6.349033 GCCGGAAATCACTGTAAAACTGTATT 60.349 38.462 5.05 0.00 0.00 1.89
7043 10672 0.739462 TTACAGTCCATCCAAGCGCG 60.739 55.000 0.00 0.00 0.00 6.86
7059 10688 1.895051 CGCGGCCTAAAGAATTTGTG 58.105 50.000 0.00 0.00 39.63 3.33
7062 10699 2.986479 GCGGCCTAAAGAATTTGTGTTG 59.014 45.455 0.00 0.00 39.63 3.33
7092 10729 4.275196 CGAGTCTGTCGGAGGATAAATGTA 59.725 45.833 0.00 0.00 45.58 2.29
7096 10733 5.177696 GTCTGTCGGAGGATAAATGTATTGC 59.822 44.000 0.00 0.00 0.00 3.56
7133 10773 6.821665 TGATCTTTCTGGTAAATTTACTCGGG 59.178 38.462 23.89 13.35 34.16 5.14
7221 10861 6.417930 GCAAAACTTGTAGGCAAAAGAACTAG 59.582 38.462 0.00 0.00 33.73 2.57
7235 10875 5.502153 AAGAACTAGGTAGATGCGTACAG 57.498 43.478 0.00 0.00 0.00 2.74
7240 10880 2.025155 AGGTAGATGCGTACAGTCAGG 58.975 52.381 0.00 0.00 0.00 3.86
7252 10892 0.539051 CAGTCAGGCTAGGGGAAGTG 59.461 60.000 0.00 0.00 0.00 3.16
7308 10948 3.953612 ACACACAAGGTTTCACATCATGT 59.046 39.130 0.00 0.00 0.00 3.21
7309 10949 4.402155 ACACACAAGGTTTCACATCATGTT 59.598 37.500 0.00 0.00 0.00 2.71
7310 10950 5.105392 ACACACAAGGTTTCACATCATGTTT 60.105 36.000 0.00 0.00 0.00 2.83
7311 10951 6.096141 ACACACAAGGTTTCACATCATGTTTA 59.904 34.615 0.00 0.00 0.00 2.01
7312 10952 6.977502 CACACAAGGTTTCACATCATGTTTAA 59.022 34.615 0.00 0.00 0.00 1.52
7313 10953 7.652909 CACACAAGGTTTCACATCATGTTTAAT 59.347 33.333 0.00 0.00 0.00 1.40
7314 10954 7.652909 ACACAAGGTTTCACATCATGTTTAATG 59.347 33.333 0.00 0.00 0.00 1.90
7315 10955 7.116662 CACAAGGTTTCACATCATGTTTAATGG 59.883 37.037 0.00 0.00 0.00 3.16
7316 10956 7.015098 ACAAGGTTTCACATCATGTTTAATGGA 59.985 33.333 0.00 0.00 0.00 3.41
7317 10957 7.722949 AGGTTTCACATCATGTTTAATGGAT 57.277 32.000 0.00 0.00 0.00 3.41
7318 10958 7.549839 AGGTTTCACATCATGTTTAATGGATG 58.450 34.615 0.00 0.00 42.12 3.51
7320 10960 8.465999 GGTTTCACATCATGTTTAATGGATGTA 58.534 33.333 5.88 0.00 46.18 2.29
7321 10961 9.289303 GTTTCACATCATGTTTAATGGATGTAC 57.711 33.333 5.88 0.00 46.18 2.90
7322 10962 7.245419 TCACATCATGTTTAATGGATGTACG 57.755 36.000 5.88 0.00 46.18 3.67
7323 10963 6.259829 TCACATCATGTTTAATGGATGTACGG 59.740 38.462 5.88 0.00 46.18 4.02
7324 10964 5.530915 ACATCATGTTTAATGGATGTACGGG 59.469 40.000 4.46 0.00 46.10 5.28
7325 10965 3.880490 TCATGTTTAATGGATGTACGGGC 59.120 43.478 0.00 0.00 0.00 6.13
7326 10966 2.281517 TGTTTAATGGATGTACGGGCG 58.718 47.619 0.00 0.00 0.00 6.13
7327 10967 2.093606 TGTTTAATGGATGTACGGGCGA 60.094 45.455 0.00 0.00 0.00 5.54
7328 10968 2.519377 TTAATGGATGTACGGGCGAG 57.481 50.000 0.00 0.00 0.00 5.03
7329 10969 0.032952 TAATGGATGTACGGGCGAGC 59.967 55.000 0.00 0.00 0.00 5.03
7330 10970 2.660258 AATGGATGTACGGGCGAGCC 62.660 60.000 5.37 5.37 0.00 4.70
7331 10971 4.944372 GGATGTACGGGCGAGCCG 62.944 72.222 8.14 6.25 36.85 5.52
7332 10972 3.896133 GATGTACGGGCGAGCCGA 61.896 66.667 8.14 0.00 36.85 5.54
7333 10973 4.203076 ATGTACGGGCGAGCCGAC 62.203 66.667 8.14 6.74 36.85 4.79
7343 10983 4.451150 GAGCCGACGACCATGCCA 62.451 66.667 0.00 0.00 0.00 4.92
7344 10984 4.760047 AGCCGACGACCATGCCAC 62.760 66.667 0.00 0.00 0.00 5.01
7346 10986 4.082523 CCGACGACCATGCCACCT 62.083 66.667 0.00 0.00 0.00 4.00
7347 10987 2.815211 CGACGACCATGCCACCTG 60.815 66.667 0.00 0.00 0.00 4.00
7348 10988 3.127533 GACGACCATGCCACCTGC 61.128 66.667 0.00 0.00 41.77 4.85
7377 11017 4.980805 TGGCCAACGCGTCTGGTC 62.981 66.667 27.21 27.21 39.14 4.02
7380 11020 4.657824 CCAACGCGTCTGGTCCGT 62.658 66.667 23.72 1.53 36.68 4.69
7381 11021 3.103911 CAACGCGTCTGGTCCGTC 61.104 66.667 14.44 0.00 33.59 4.79
7382 11022 3.292936 AACGCGTCTGGTCCGTCT 61.293 61.111 14.44 0.00 33.59 4.18
7383 11023 3.553437 AACGCGTCTGGTCCGTCTG 62.553 63.158 14.44 0.00 33.59 3.51
7386 11026 4.039357 CGTCTGGTCCGTCTGCGT 62.039 66.667 0.00 0.00 36.15 5.24
7387 11027 2.430921 GTCTGGTCCGTCTGCGTG 60.431 66.667 0.00 0.00 36.15 5.34
7388 11028 3.680786 TCTGGTCCGTCTGCGTGG 61.681 66.667 0.00 0.00 36.15 4.94
7389 11029 3.680786 CTGGTCCGTCTGCGTGGA 61.681 66.667 0.00 0.00 36.15 4.02
7393 11033 2.910479 TCCGTCTGCGTGGACACT 60.910 61.111 9.71 0.00 36.12 3.55
7394 11034 2.734723 CCGTCTGCGTGGACACTG 60.735 66.667 9.71 0.00 36.12 3.66
7395 11035 2.734723 CGTCTGCGTGGACACTGG 60.735 66.667 9.71 0.00 36.12 4.00
7396 11036 2.734591 GTCTGCGTGGACACTGGA 59.265 61.111 0.56 0.00 36.35 3.86
7397 11037 1.664965 GTCTGCGTGGACACTGGAC 60.665 63.158 0.56 2.99 36.35 4.02
7398 11038 2.131067 TCTGCGTGGACACTGGACA 61.131 57.895 0.56 0.00 0.00 4.02
7399 11039 1.956170 CTGCGTGGACACTGGACAC 60.956 63.158 0.56 0.00 0.00 3.67
7400 11040 2.665185 GCGTGGACACTGGACACC 60.665 66.667 0.56 0.00 0.00 4.16
7401 11041 2.030562 CGTGGACACTGGACACCC 59.969 66.667 0.56 0.00 0.00 4.61
7402 11042 2.802724 CGTGGACACTGGACACCCA 61.803 63.158 0.56 0.00 40.95 4.51
7403 11043 1.227853 GTGGACACTGGACACCCAC 60.228 63.158 0.00 0.00 40.20 4.61
7404 11044 2.030562 GGACACTGGACACCCACG 59.969 66.667 0.00 0.00 37.58 4.94
7405 11045 2.030562 GACACTGGACACCCACGG 59.969 66.667 0.00 0.00 37.58 4.94
7406 11046 2.445085 ACACTGGACACCCACGGA 60.445 61.111 0.00 0.00 37.58 4.69
7407 11047 2.035237 GACACTGGACACCCACGGAA 62.035 60.000 0.00 0.00 37.58 4.30
7408 11048 1.597027 CACTGGACACCCACGGAAC 60.597 63.158 0.00 0.00 37.58 3.62
7409 11049 2.067605 ACTGGACACCCACGGAACA 61.068 57.895 0.00 0.00 37.58 3.18
7410 11050 1.301716 CTGGACACCCACGGAACAG 60.302 63.158 0.00 0.00 37.58 3.16
7411 11051 1.754380 CTGGACACCCACGGAACAGA 61.754 60.000 0.00 0.00 37.58 3.41
7412 11052 1.338890 TGGACACCCACGGAACAGAA 61.339 55.000 0.00 0.00 37.58 3.02
7413 11053 0.179040 GGACACCCACGGAACAGAAA 60.179 55.000 0.00 0.00 0.00 2.52
7414 11054 1.544759 GGACACCCACGGAACAGAAAT 60.545 52.381 0.00 0.00 0.00 2.17
7415 11055 1.535462 GACACCCACGGAACAGAAATG 59.465 52.381 0.00 0.00 0.00 2.32
7416 11056 1.133915 ACACCCACGGAACAGAAATGT 60.134 47.619 0.00 0.00 0.00 2.71
7417 11057 1.953686 CACCCACGGAACAGAAATGTT 59.046 47.619 0.00 0.00 34.29 2.71
7418 11058 2.031157 CACCCACGGAACAGAAATGTTC 60.031 50.000 11.71 11.71 45.31 3.18
7428 11068 5.066505 GGAACAGAAATGTTCACAAGTCTGT 59.933 40.000 19.48 17.21 46.73 3.41
7430 11070 5.883661 ACAGAAATGTTCACAAGTCTGTTG 58.116 37.500 17.21 2.98 44.57 3.33
7431 11071 5.647658 ACAGAAATGTTCACAAGTCTGTTGA 59.352 36.000 17.21 0.00 44.57 3.18
7432 11072 6.183360 ACAGAAATGTTCACAAGTCTGTTGAG 60.183 38.462 17.21 1.80 44.57 3.02
7433 11073 6.037500 CAGAAATGTTCACAAGTCTGTTGAGA 59.962 38.462 12.16 0.00 36.69 3.27
7434 11074 5.998454 AATGTTCACAAGTCTGTTGAGAG 57.002 39.130 0.00 0.00 31.64 3.20
7435 11075 3.198068 TGTTCACAAGTCTGTTGAGAGC 58.802 45.455 0.00 0.00 31.64 4.09
7436 11076 3.198068 GTTCACAAGTCTGTTGAGAGCA 58.802 45.455 0.00 0.00 31.64 4.26
7437 11077 3.103447 TCACAAGTCTGTTGAGAGCAG 57.897 47.619 0.00 0.00 31.64 4.24
7438 11078 2.695147 TCACAAGTCTGTTGAGAGCAGA 59.305 45.455 0.00 0.00 40.28 4.26
7439 11079 3.058450 CACAAGTCTGTTGAGAGCAGAG 58.942 50.000 0.00 0.00 42.80 3.35
7440 11080 2.697751 ACAAGTCTGTTGAGAGCAGAGT 59.302 45.455 0.00 0.00 45.47 3.24
7441 11081 3.891977 ACAAGTCTGTTGAGAGCAGAGTA 59.108 43.478 3.48 0.00 43.51 2.59
7442 11082 4.233789 CAAGTCTGTTGAGAGCAGAGTAC 58.766 47.826 3.48 0.00 43.51 2.73
7443 11083 3.491342 AGTCTGTTGAGAGCAGAGTACA 58.509 45.455 0.00 0.00 42.77 2.90
7444 11084 4.085733 AGTCTGTTGAGAGCAGAGTACAT 58.914 43.478 0.00 0.00 42.77 2.29
7445 11085 4.157656 AGTCTGTTGAGAGCAGAGTACATC 59.842 45.833 0.00 0.00 42.77 3.06
7446 11086 3.445450 TCTGTTGAGAGCAGAGTACATCC 59.555 47.826 0.00 0.00 37.98 3.51
7447 11087 3.435275 TGTTGAGAGCAGAGTACATCCT 58.565 45.455 0.00 0.00 0.00 3.24
7448 11088 3.445450 TGTTGAGAGCAGAGTACATCCTC 59.555 47.826 0.00 0.00 0.00 3.71
7449 11089 3.660970 TGAGAGCAGAGTACATCCTCT 57.339 47.619 0.00 0.33 42.55 3.69
7457 11097 4.054359 AGAGTACATCCTCTGTTCAGGT 57.946 45.455 0.00 0.00 40.30 4.00
7458 11098 4.421131 AGAGTACATCCTCTGTTCAGGTT 58.579 43.478 0.00 0.00 40.30 3.50
7459 11099 4.841246 AGAGTACATCCTCTGTTCAGGTTT 59.159 41.667 0.00 0.00 40.30 3.27
7460 11100 5.308237 AGAGTACATCCTCTGTTCAGGTTTT 59.692 40.000 0.00 0.00 40.30 2.43
7461 11101 5.941788 AGTACATCCTCTGTTCAGGTTTTT 58.058 37.500 0.00 0.00 39.39 1.94
7462 11102 5.765182 AGTACATCCTCTGTTCAGGTTTTTG 59.235 40.000 0.00 0.00 39.39 2.44
7463 11103 4.792068 ACATCCTCTGTTCAGGTTTTTGA 58.208 39.130 0.00 0.00 32.90 2.69
7464 11104 5.200483 ACATCCTCTGTTCAGGTTTTTGAA 58.800 37.500 0.00 0.00 32.90 2.69
7465 11105 5.300286 ACATCCTCTGTTCAGGTTTTTGAAG 59.700 40.000 0.00 0.00 37.72 3.02
7466 11106 3.632145 TCCTCTGTTCAGGTTTTTGAAGC 59.368 43.478 0.00 0.00 37.72 3.86
7467 11107 3.381272 CCTCTGTTCAGGTTTTTGAAGCA 59.619 43.478 0.00 0.00 37.72 3.91
7468 11108 4.498682 CCTCTGTTCAGGTTTTTGAAGCAG 60.499 45.833 0.00 9.80 37.72 4.24
7469 11109 4.269183 TCTGTTCAGGTTTTTGAAGCAGA 58.731 39.130 12.57 12.57 39.73 4.26
7470 11110 4.336433 TCTGTTCAGGTTTTTGAAGCAGAG 59.664 41.667 12.57 0.00 38.62 3.35
7471 11111 4.016444 TGTTCAGGTTTTTGAAGCAGAGT 58.984 39.130 0.00 0.00 37.72 3.24
7472 11112 4.096382 TGTTCAGGTTTTTGAAGCAGAGTC 59.904 41.667 0.00 0.00 37.72 3.36
7473 11113 4.156455 TCAGGTTTTTGAAGCAGAGTCT 57.844 40.909 0.00 0.00 0.00 3.24
7474 11114 4.130118 TCAGGTTTTTGAAGCAGAGTCTC 58.870 43.478 0.00 0.00 0.00 3.36
7475 11115 4.133078 CAGGTTTTTGAAGCAGAGTCTCT 58.867 43.478 0.00 0.00 0.00 3.10
7476 11116 4.578105 CAGGTTTTTGAAGCAGAGTCTCTT 59.422 41.667 0.00 0.00 0.00 2.85
7477 11117 4.819088 AGGTTTTTGAAGCAGAGTCTCTTC 59.181 41.667 18.14 18.14 39.20 2.87
7478 11118 4.023622 GGTTTTTGAAGCAGAGTCTCTTCC 60.024 45.833 20.37 10.64 38.26 3.46
7479 11119 4.422073 TTTTGAAGCAGAGTCTCTTCCA 57.578 40.909 20.37 12.48 38.26 3.53
7480 11120 4.630644 TTTGAAGCAGAGTCTCTTCCAT 57.369 40.909 20.37 0.00 38.26 3.41
7481 11121 4.630644 TTGAAGCAGAGTCTCTTCCATT 57.369 40.909 20.37 0.00 38.26 3.16
7482 11122 4.630644 TGAAGCAGAGTCTCTTCCATTT 57.369 40.909 20.37 0.00 38.26 2.32
7483 11123 4.978099 TGAAGCAGAGTCTCTTCCATTTT 58.022 39.130 20.37 0.00 38.26 1.82
7484 11124 5.380043 TGAAGCAGAGTCTCTTCCATTTTT 58.620 37.500 20.37 0.00 38.26 1.94
7485 11125 5.240183 TGAAGCAGAGTCTCTTCCATTTTTG 59.760 40.000 20.37 0.00 38.26 2.44
7486 11126 4.077822 AGCAGAGTCTCTTCCATTTTTGG 58.922 43.478 0.00 0.00 0.00 3.28
7487 11127 3.192212 GCAGAGTCTCTTCCATTTTTGGG 59.808 47.826 0.00 0.00 0.00 4.12
7488 11128 3.760684 CAGAGTCTCTTCCATTTTTGGGG 59.239 47.826 0.00 0.00 0.00 4.96
7489 11129 3.657727 AGAGTCTCTTCCATTTTTGGGGA 59.342 43.478 0.00 0.00 0.00 4.81
7490 11130 3.759086 GAGTCTCTTCCATTTTTGGGGAC 59.241 47.826 0.00 0.00 31.59 4.46
7491 11131 3.140144 AGTCTCTTCCATTTTTGGGGACA 59.860 43.478 0.00 0.00 39.83 4.02
7502 11142 2.006748 TGGGGACAAGGCCAATAGG 58.993 57.895 5.01 0.00 37.44 2.57
7519 11159 3.766691 GCCATGGCCTGCCTGTTG 61.767 66.667 27.24 4.76 36.94 3.33
7520 11160 3.766691 CCATGGCCTGCCTGTTGC 61.767 66.667 9.97 0.00 41.77 4.17
7521 11161 3.766691 CATGGCCTGCCTGTTGCC 61.767 66.667 9.97 0.00 45.56 4.52
7561 11201 4.409342 CGGGAGCTCGTCAATCTG 57.591 61.111 7.83 0.00 0.00 2.90
7562 11202 1.513158 CGGGAGCTCGTCAATCTGT 59.487 57.895 7.83 0.00 0.00 3.41
7563 11203 0.738975 CGGGAGCTCGTCAATCTGTA 59.261 55.000 7.83 0.00 0.00 2.74
7564 11204 1.338337 CGGGAGCTCGTCAATCTGTAT 59.662 52.381 7.83 0.00 0.00 2.29
7565 11205 2.748605 GGGAGCTCGTCAATCTGTATG 58.251 52.381 7.83 0.00 0.00 2.39
7566 11206 2.101582 GGGAGCTCGTCAATCTGTATGT 59.898 50.000 7.83 0.00 0.00 2.29
7567 11207 3.430929 GGGAGCTCGTCAATCTGTATGTT 60.431 47.826 7.83 0.00 0.00 2.71
7568 11208 3.553511 GGAGCTCGTCAATCTGTATGTTG 59.446 47.826 7.83 0.00 0.00 3.33
7569 11209 3.525537 AGCTCGTCAATCTGTATGTTGG 58.474 45.455 0.00 0.00 0.00 3.77
7570 11210 2.609459 GCTCGTCAATCTGTATGTTGGG 59.391 50.000 0.00 0.00 0.00 4.12
7571 11211 3.198068 CTCGTCAATCTGTATGTTGGGG 58.802 50.000 0.00 0.00 0.00 4.96
7572 11212 2.835156 TCGTCAATCTGTATGTTGGGGA 59.165 45.455 0.00 0.00 0.00 4.81
7573 11213 3.118775 TCGTCAATCTGTATGTTGGGGAG 60.119 47.826 0.00 0.00 0.00 4.30
7574 11214 2.945668 GTCAATCTGTATGTTGGGGAGC 59.054 50.000 0.00 0.00 0.00 4.70
7575 11215 1.942657 CAATCTGTATGTTGGGGAGCG 59.057 52.381 0.00 0.00 0.00 5.03
7576 11216 1.204146 ATCTGTATGTTGGGGAGCGT 58.796 50.000 0.00 0.00 0.00 5.07
7577 11217 1.855295 TCTGTATGTTGGGGAGCGTA 58.145 50.000 0.00 0.00 0.00 4.42
7578 11218 2.394632 TCTGTATGTTGGGGAGCGTAT 58.605 47.619 0.00 0.00 0.00 3.06
7579 11219 2.364324 TCTGTATGTTGGGGAGCGTATC 59.636 50.000 0.00 0.00 0.00 2.24
7580 11220 2.365617 CTGTATGTTGGGGAGCGTATCT 59.634 50.000 0.00 0.00 0.00 1.98
7581 11221 2.102420 TGTATGTTGGGGAGCGTATCTG 59.898 50.000 0.00 0.00 0.00 2.90
7582 11222 0.179045 ATGTTGGGGAGCGTATCTGC 60.179 55.000 0.00 0.00 0.00 4.26
7586 11226 4.301027 GGGAGCGTATCTGCCCGG 62.301 72.222 0.00 0.00 46.57 5.73
7587 11227 4.971125 GGAGCGTATCTGCCCGGC 62.971 72.222 1.04 1.04 34.65 6.13
7588 11228 4.221422 GAGCGTATCTGCCCGGCA 62.221 66.667 12.67 12.67 36.92 5.69
7603 11243 2.202743 GCAGAGCCGCGTGATGTA 60.203 61.111 4.92 0.00 0.00 2.29
7604 11244 1.592669 GCAGAGCCGCGTGATGTAT 60.593 57.895 4.92 0.00 0.00 2.29
7605 11245 1.154205 GCAGAGCCGCGTGATGTATT 61.154 55.000 4.92 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
139 140 0.604243 TTGCAACACGTATCGGCCTT 60.604 50.000 0.00 0.00 0.00 4.35
163 164 7.276438 GTCTTTAATTGGATTTTGATGAGGTGC 59.724 37.037 0.00 0.00 0.00 5.01
194 195 4.805192 GCATGCGTGGTTATTGATGATTTT 59.195 37.500 8.27 0.00 0.00 1.82
433 434 9.524106 CATGCATGTGTAGTTATTGATGATTTT 57.476 29.630 18.91 0.00 0.00 1.82
448 449 0.248843 TGTCGAGGCATGCATGTGTA 59.751 50.000 26.79 6.87 0.00 2.90
512 513 8.106462 TCACCCAATAATTATGACTCAAGAACA 58.894 33.333 0.00 0.00 0.00 3.18
526 527 3.845109 AACACCCCTCACCCAATAATT 57.155 42.857 0.00 0.00 0.00 1.40
537 538 2.109425 AGCAATACGAAACACCCCTC 57.891 50.000 0.00 0.00 0.00 4.30
673 685 4.615513 AGAGTAGTTAAGTCTCTGGCCAT 58.384 43.478 5.51 0.00 37.20 4.40
684 696 2.613133 CCGGACGGAGAGAGTAGTTAAG 59.387 54.545 4.40 0.00 37.50 1.85
695 707 2.173519 ACAAGTATTTCCGGACGGAGA 58.826 47.619 13.64 10.06 46.06 3.71
798 810 8.250332 GTCTGAAAATACTTGCCCAATAAATGA 58.750 33.333 0.00 0.00 0.00 2.57
799 811 8.034215 TGTCTGAAAATACTTGCCCAATAAATG 58.966 33.333 0.00 0.00 0.00 2.32
803 815 6.480763 TCTGTCTGAAAATACTTGCCCAATA 58.519 36.000 0.00 0.00 0.00 1.90
804 816 5.324409 TCTGTCTGAAAATACTTGCCCAAT 58.676 37.500 0.00 0.00 0.00 3.16
809 821 5.049129 ACTTGCTCTGTCTGAAAATACTTGC 60.049 40.000 0.00 0.00 0.00 4.01
819 831 3.891977 ACTCAACTACTTGCTCTGTCTGA 59.108 43.478 0.00 0.00 0.00 3.27
821 833 5.074115 ACTACTCAACTACTTGCTCTGTCT 58.926 41.667 0.00 0.00 0.00 3.41
823 835 5.416326 CCTACTACTCAACTACTTGCTCTGT 59.584 44.000 0.00 0.00 0.00 3.41
824 836 5.416326 ACCTACTACTCAACTACTTGCTCTG 59.584 44.000 0.00 0.00 0.00 3.35
825 837 5.416326 CACCTACTACTCAACTACTTGCTCT 59.584 44.000 0.00 0.00 0.00 4.09
826 838 5.642686 CACCTACTACTCAACTACTTGCTC 58.357 45.833 0.00 0.00 0.00 4.26
827 839 4.082136 GCACCTACTACTCAACTACTTGCT 60.082 45.833 0.00 0.00 0.00 3.91
828 840 4.174762 GCACCTACTACTCAACTACTTGC 58.825 47.826 0.00 0.00 0.00 4.01
829 841 4.413087 CGCACCTACTACTCAACTACTTG 58.587 47.826 0.00 0.00 0.00 3.16
835 848 1.542915 TGACCGCACCTACTACTCAAC 59.457 52.381 0.00 0.00 0.00 3.18
840 853 2.291190 GAGAGATGACCGCACCTACTAC 59.709 54.545 0.00 0.00 0.00 2.73
869 882 1.480789 AACCACTTCCACCCACAAAC 58.519 50.000 0.00 0.00 0.00 2.93
914 936 3.034030 GTGTGCTCACCAGGTTGC 58.966 61.111 7.70 7.28 38.51 4.17
927 949 1.830279 ATGGCTCTGATTGTGGTGTG 58.170 50.000 0.00 0.00 0.00 3.82
928 950 2.573462 ACTATGGCTCTGATTGTGGTGT 59.427 45.455 0.00 0.00 0.00 4.16
930 952 2.840038 TGACTATGGCTCTGATTGTGGT 59.160 45.455 0.00 0.00 0.00 4.16
931 953 3.548745 TGACTATGGCTCTGATTGTGG 57.451 47.619 0.00 0.00 0.00 4.17
934 956 5.008415 GGTTTGATGACTATGGCTCTGATTG 59.992 44.000 0.00 0.00 0.00 2.67
935 957 5.128919 GGTTTGATGACTATGGCTCTGATT 58.871 41.667 0.00 0.00 0.00 2.57
936 958 4.164796 TGGTTTGATGACTATGGCTCTGAT 59.835 41.667 0.00 0.00 0.00 2.90
937 959 3.519107 TGGTTTGATGACTATGGCTCTGA 59.481 43.478 0.00 0.00 0.00 3.27
938 960 3.624861 GTGGTTTGATGACTATGGCTCTG 59.375 47.826 0.00 0.00 0.00 3.35
939 961 3.264193 TGTGGTTTGATGACTATGGCTCT 59.736 43.478 0.00 0.00 0.00 4.09
940 962 3.609853 TGTGGTTTGATGACTATGGCTC 58.390 45.455 0.00 0.00 0.00 4.70
941 963 3.719268 TGTGGTTTGATGACTATGGCT 57.281 42.857 0.00 0.00 0.00 4.75
942 964 3.758554 ACTTGTGGTTTGATGACTATGGC 59.241 43.478 0.00 0.00 0.00 4.40
943 965 5.964958 AACTTGTGGTTTGATGACTATGG 57.035 39.130 0.00 0.00 33.90 2.74
955 977 1.692411 GCTCCTCCAAACTTGTGGTT 58.308 50.000 0.00 0.00 39.88 3.67
956 978 0.535102 CGCTCCTCCAAACTTGTGGT 60.535 55.000 0.00 0.00 39.88 4.16
957 979 0.250295 TCGCTCCTCCAAACTTGTGG 60.250 55.000 0.00 0.00 40.33 4.17
958 980 1.151668 CTCGCTCCTCCAAACTTGTG 58.848 55.000 0.00 0.00 0.00 3.33
959 981 0.603975 GCTCGCTCCTCCAAACTTGT 60.604 55.000 0.00 0.00 0.00 3.16
960 982 1.630244 CGCTCGCTCCTCCAAACTTG 61.630 60.000 0.00 0.00 0.00 3.16
961 983 1.374758 CGCTCGCTCCTCCAAACTT 60.375 57.895 0.00 0.00 0.00 2.66
1098 1125 1.814169 GAAACCGATGTCGCCCTCC 60.814 63.158 0.00 0.00 38.18 4.30
1191 1218 3.245948 ACTCCTCCATGGATAGGATCTCC 60.246 52.174 20.18 0.00 45.16 3.71
1281 1308 2.485188 GATCGCGGATCTGGAGCTCC 62.485 65.000 26.78 26.78 36.27 4.70
1718 1751 1.937924 AAGCCCCTCAAGTATGGCCC 61.938 60.000 0.00 0.00 45.14 5.80
1801 1834 2.037381 ACCTCTTTGTCCGGAGAAGAAC 59.963 50.000 23.34 6.70 0.00 3.01
1864 1897 4.654262 TGGGACAGAGGGAGTATAATTGAC 59.346 45.833 0.00 0.00 0.00 3.18
1918 2186 7.140705 ACAAATGCATAATTGACGGATACATG 58.859 34.615 16.22 0.00 0.00 3.21
1995 3135 3.635591 AGATTTGGCTAAACTGATGGGG 58.364 45.455 0.00 0.00 0.00 4.96
2114 3508 4.873827 GGCGTACTGATTAGTTCATGGAAA 59.126 41.667 0.00 0.00 38.36 3.13
2117 3511 4.060038 AGGCGTACTGATTAGTTCATGG 57.940 45.455 0.00 0.00 38.36 3.66
2157 3571 6.058183 ACAAACTGAATGTTAGAGTTGAGCT 58.942 36.000 0.00 0.00 38.03 4.09
2204 3727 5.914635 CACTTGCAAAACAATAGGTACTGTG 59.085 40.000 0.00 0.00 37.72 3.66
2214 3737 7.711846 TGATACTTGTACACTTGCAAAACAAT 58.288 30.769 13.46 8.79 37.72 2.71
2298 5566 2.360165 GCCAGAAATAGCCCAATGACAG 59.640 50.000 0.00 0.00 0.00 3.51
2303 5571 1.109323 GCCGCCAGAAATAGCCCAAT 61.109 55.000 0.00 0.00 0.00 3.16
2334 5608 6.151144 CGAAGTTAATTTCCAGGGAAACTCAT 59.849 38.462 15.30 5.75 45.34 2.90
2355 5629 3.756434 TCCCTTTGCAGGTTATTTCGAAG 59.244 43.478 0.00 0.00 38.79 3.79
2428 5702 4.048470 GGGACAGGGGGACTTGGC 62.048 72.222 0.00 0.00 46.79 4.52
2429 5703 3.339093 GGGGACAGGGGGACTTGG 61.339 72.222 0.00 0.00 42.75 3.61
2430 5704 3.717294 CGGGGACAGGGGGACTTG 61.717 72.222 0.00 0.00 44.31 3.16
2431 5705 4.265507 ACGGGGACAGGGGGACTT 62.266 66.667 0.00 0.00 0.00 3.01
2632 5907 3.385384 CCGAGCTGAGAGCCACCA 61.385 66.667 0.00 0.00 43.77 4.17
3021 6296 4.592192 CGCATCCAGATCGCCGGT 62.592 66.667 1.90 0.00 0.00 5.28
3276 6562 1.287191 CGCCGTCATCCGATCATCT 59.713 57.895 0.00 0.00 39.56 2.90
3536 6824 5.752472 CCATCTTCAGAGCTATACTGTTGTG 59.248 44.000 1.25 0.00 36.81 3.33
3677 6980 2.831685 TACCAAACAGACATCGCAGT 57.168 45.000 0.00 0.00 0.00 4.40
3886 7194 9.048446 GTAGTACAACCAATTGAAAACTCTACA 57.952 33.333 7.12 0.00 39.30 2.74
3887 7195 9.048446 TGTAGTACAACCAATTGAAAACTCTAC 57.952 33.333 7.12 12.27 39.30 2.59
3944 7318 3.680937 TGCAGGAAAATTCGTACTTACCG 59.319 43.478 0.00 0.00 0.00 4.02
3953 7327 5.973565 GGTCTCATATTTGCAGGAAAATTCG 59.026 40.000 0.00 0.00 32.16 3.34
4148 7534 4.891168 TCTAAAAAGTCCCCTGTTTTGGTC 59.109 41.667 0.00 0.00 30.60 4.02
4149 7535 4.647853 GTCTAAAAAGTCCCCTGTTTTGGT 59.352 41.667 0.00 0.00 30.60 3.67
4150 7536 4.038763 GGTCTAAAAAGTCCCCTGTTTTGG 59.961 45.833 0.00 0.00 30.60 3.28
4151 7537 4.647399 TGGTCTAAAAAGTCCCCTGTTTTG 59.353 41.667 0.00 0.00 30.60 2.44
4152 7538 4.874199 TGGTCTAAAAAGTCCCCTGTTTT 58.126 39.130 0.00 0.00 30.60 2.43
4153 7539 4.529716 TGGTCTAAAAAGTCCCCTGTTT 57.470 40.909 0.00 0.00 32.74 2.83
4154 7540 4.529716 TTGGTCTAAAAAGTCCCCTGTT 57.470 40.909 0.00 0.00 0.00 3.16
4155 7541 4.529716 TTTGGTCTAAAAAGTCCCCTGT 57.470 40.909 0.00 0.00 0.00 4.00
4156 7542 4.647399 TGTTTTGGTCTAAAAAGTCCCCTG 59.353 41.667 0.00 0.00 39.79 4.45
4157 7543 4.874199 TGTTTTGGTCTAAAAAGTCCCCT 58.126 39.130 0.00 0.00 39.79 4.79
4158 7544 4.038763 CCTGTTTTGGTCTAAAAAGTCCCC 59.961 45.833 0.00 0.00 39.79 4.81
4159 7545 4.038763 CCCTGTTTTGGTCTAAAAAGTCCC 59.961 45.833 0.00 0.00 39.79 4.46
4160 7546 4.038763 CCCCTGTTTTGGTCTAAAAAGTCC 59.961 45.833 0.00 0.00 39.79 3.85
4161 7547 4.891168 TCCCCTGTTTTGGTCTAAAAAGTC 59.109 41.667 0.00 0.00 39.79 3.01
4162 7548 4.647853 GTCCCCTGTTTTGGTCTAAAAAGT 59.352 41.667 0.00 0.00 39.79 2.66
4163 7549 4.893524 AGTCCCCTGTTTTGGTCTAAAAAG 59.106 41.667 0.00 0.00 39.79 2.27
4164 7550 4.874199 AGTCCCCTGTTTTGGTCTAAAAA 58.126 39.130 0.00 0.00 39.79 1.94
4165 7551 4.529716 AGTCCCCTGTTTTGGTCTAAAA 57.470 40.909 0.00 0.00 35.96 1.52
4166 7552 4.529716 AAGTCCCCTGTTTTGGTCTAAA 57.470 40.909 0.00 0.00 0.00 1.85
4167 7553 4.529716 AAAGTCCCCTGTTTTGGTCTAA 57.470 40.909 0.00 0.00 0.00 2.10
4168 7554 4.529716 AAAAGTCCCCTGTTTTGGTCTA 57.470 40.909 0.00 0.00 0.00 2.59
4169 7555 3.398318 AAAAGTCCCCTGTTTTGGTCT 57.602 42.857 0.00 0.00 0.00 3.85
4239 7666 6.312426 TGGAAAAATGCAAAGTTAATATGCCG 59.688 34.615 0.00 0.00 39.31 5.69
4553 7983 1.225855 TGGCAACACTAACAAGAGCG 58.774 50.000 0.00 0.00 46.17 5.03
4724 8160 6.975772 CACTTGAGTATAGTAAGCAGGTCTTC 59.024 42.308 0.00 0.00 36.25 2.87
4790 8226 0.387929 CTTCGGCTAACCATCGGCTA 59.612 55.000 0.00 0.00 34.57 3.93
4820 8256 1.361668 CGGCAATCTCTTGGTCACCG 61.362 60.000 0.00 0.00 32.72 4.94
4872 8323 0.876342 GGATCGACAGGCCGAATGAC 60.876 60.000 0.00 0.00 42.22 3.06
4929 8380 2.947652 GCATGAACTGGTGCATGATACT 59.052 45.455 21.89 0.00 43.43 2.12
5059 8510 0.764890 ACCGATACCATGTCCCATGG 59.235 55.000 19.19 19.19 44.54 3.66
5192 8646 3.936372 TCTTCTACACTCCCAAAGACG 57.064 47.619 0.00 0.00 0.00 4.18
5357 8814 4.037923 TGAAGCCTTTCCATTTCAACTGAC 59.962 41.667 0.00 0.00 32.09 3.51
5759 9216 2.223203 GCCTTGATCGTGATGAAGCAAG 60.223 50.000 11.43 11.43 40.21 4.01
5772 9229 3.751621 CAATTGAGTTGTCGCCTTGATC 58.248 45.455 0.00 0.00 33.01 2.92
5787 9244 4.946445 TGCTTTCTTGATGTTGCAATTGA 58.054 34.783 10.34 0.00 0.00 2.57
5855 9330 1.710809 AGGCCCATAACAAACTGAGGT 59.289 47.619 0.00 0.00 0.00 3.85
5872 9347 2.743928 CCTTCAGACCACGCAGGC 60.744 66.667 0.00 0.00 43.14 4.85
5975 9450 3.723554 GGCGAGATCGACTTCAACT 57.276 52.632 6.39 0.00 45.57 3.16
6038 9516 1.208293 GGTTTTTCCACCACAAGGCAA 59.792 47.619 0.00 0.00 39.06 4.52
6160 9638 3.134458 ACTTCCTCAAGAGCTTCAAACG 58.866 45.455 0.00 0.00 33.34 3.60
6264 9742 1.594331 ACCACCTTTTCGAGCAAGAC 58.406 50.000 7.78 0.00 0.00 3.01
6293 9771 7.908082 GCAGCATATTTCAACGACATAGTTTTA 59.092 33.333 0.00 0.00 30.96 1.52
6306 9790 1.679139 CGGGAGGCAGCATATTTCAA 58.321 50.000 0.00 0.00 0.00 2.69
6341 9825 0.389426 GCGGAGTGTCGGTGTAACAT 60.389 55.000 0.00 0.00 39.98 2.71
6369 9895 2.224137 TGACTTGACAAGACCTCTGCAG 60.224 50.000 21.95 7.63 0.00 4.41
6414 9940 0.318441 TCAAACAGAGAGCGAGGTGG 59.682 55.000 0.00 0.00 0.00 4.61
6441 9967 0.670162 CCTGGTCCACTGCAAACTTG 59.330 55.000 0.00 0.00 0.00 3.16
6465 9995 6.209192 TGACAGGCAACAATATGAGAAATGTT 59.791 34.615 0.00 0.00 36.49 2.71
6498 10057 7.480229 CAGAACATGAATAACGTTATTGCGAAA 59.520 33.333 32.38 15.65 33.72 3.46
6502 10061 7.369800 CGTACAGAACATGAATAACGTTATTGC 59.630 37.037 32.38 23.42 33.72 3.56
6551 10135 4.195416 GAGGCCCTTGACAAGATAAGAAG 58.805 47.826 16.99 0.00 0.00 2.85
6554 10138 3.198635 TCTGAGGCCCTTGACAAGATAAG 59.801 47.826 16.99 5.58 0.00 1.73
6599 10200 6.365970 AGAGTCCAGTTTCACATCTAATGT 57.634 37.500 0.00 0.00 46.22 2.71
6628 10231 3.005554 CTGCTCAACGGAAGATGAATGT 58.994 45.455 0.00 0.00 42.53 2.71
6637 10240 1.896660 GTTGGGCTGCTCAACGGAA 60.897 57.895 27.56 0.00 35.75 4.30
6661 10264 3.182182 GTCGAACCTTACCAATCGTACC 58.818 50.000 0.00 0.00 36.70 3.34
6666 10269 5.667466 TCCTTATGTCGAACCTTACCAATC 58.333 41.667 0.00 0.00 0.00 2.67
6743 10346 6.423302 CGGTGGAGATTTATTCAGAATCTGAG 59.577 42.308 13.11 0.00 42.34 3.35
6748 10351 4.576463 GCACGGTGGAGATTTATTCAGAAT 59.424 41.667 10.60 0.20 0.00 2.40
6793 10396 5.462398 CCGATTTCTAGGACAAGTATTTCCG 59.538 44.000 0.00 0.00 36.95 4.30
6796 10399 6.708285 ACACCGATTTCTAGGACAAGTATTT 58.292 36.000 0.00 0.00 0.00 1.40
6797 10400 6.295719 ACACCGATTTCTAGGACAAGTATT 57.704 37.500 0.00 0.00 0.00 1.89
6798 10401 5.934402 ACACCGATTTCTAGGACAAGTAT 57.066 39.130 0.00 0.00 0.00 2.12
6801 10404 6.150396 AGATACACCGATTTCTAGGACAAG 57.850 41.667 0.00 0.00 0.00 3.16
6802 10405 7.013083 GTCTAGATACACCGATTTCTAGGACAA 59.987 40.741 0.00 0.00 38.67 3.18
6803 10406 6.485984 GTCTAGATACACCGATTTCTAGGACA 59.514 42.308 0.00 0.00 38.67 4.02
6805 10408 6.839454 AGTCTAGATACACCGATTTCTAGGA 58.161 40.000 0.00 0.00 38.67 2.94
6861 10464 9.326413 CCGTCCAGAAATACTTGTCTTATAAAT 57.674 33.333 0.00 0.00 0.00 1.40
6862 10465 8.533657 TCCGTCCAGAAATACTTGTCTTATAAA 58.466 33.333 0.00 0.00 0.00 1.40
6863 10466 8.070034 TCCGTCCAGAAATACTTGTCTTATAA 57.930 34.615 0.00 0.00 0.00 0.98
6864 10467 7.201884 CCTCCGTCCAGAAATACTTGTCTTATA 60.202 40.741 0.00 0.00 0.00 0.98
6865 10468 6.407074 CCTCCGTCCAGAAATACTTGTCTTAT 60.407 42.308 0.00 0.00 0.00 1.73
6866 10469 5.105473 CCTCCGTCCAGAAATACTTGTCTTA 60.105 44.000 0.00 0.00 0.00 2.10
6867 10470 4.322801 CCTCCGTCCAGAAATACTTGTCTT 60.323 45.833 0.00 0.00 0.00 3.01
6868 10471 3.195825 CCTCCGTCCAGAAATACTTGTCT 59.804 47.826 0.00 0.00 0.00 3.41
6869 10472 3.522553 CCTCCGTCCAGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
6870 10473 2.236395 CCCTCCGTCCAGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
6871 10474 2.500098 TCCCTCCGTCCAGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
6872 10475 2.766828 CTCCCTCCGTCCAGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
6873 10476 2.292323 ACTCCCTCCGTCCAGAAATACT 60.292 50.000 0.00 0.00 0.00 2.12
6874 10477 2.108970 ACTCCCTCCGTCCAGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
6875 10478 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
6876 10479 2.544844 TACTCCCTCCGTCCAGAAAT 57.455 50.000 0.00 0.00 0.00 2.17
6877 10480 2.544844 ATACTCCCTCCGTCCAGAAA 57.455 50.000 0.00 0.00 0.00 2.52
6878 10481 2.544844 AATACTCCCTCCGTCCAGAA 57.455 50.000 0.00 0.00 0.00 3.02
6879 10482 3.897657 ATAATACTCCCTCCGTCCAGA 57.102 47.619 0.00 0.00 0.00 3.86
6880 10483 5.480772 ACATTATAATACTCCCTCCGTCCAG 59.519 44.000 0.00 0.00 0.00 3.86
6881 10484 5.399991 ACATTATAATACTCCCTCCGTCCA 58.600 41.667 0.00 0.00 0.00 4.02
6882 10485 5.479375 TGACATTATAATACTCCCTCCGTCC 59.521 44.000 0.00 0.00 0.00 4.79
6883 10486 6.388278 GTGACATTATAATACTCCCTCCGTC 58.612 44.000 0.00 0.00 0.00 4.79
6884 10487 5.245526 GGTGACATTATAATACTCCCTCCGT 59.754 44.000 0.00 0.00 0.00 4.69
6885 10488 5.480772 AGGTGACATTATAATACTCCCTCCG 59.519 44.000 14.08 0.00 0.00 4.63
6886 10489 6.936968 AGGTGACATTATAATACTCCCTCC 57.063 41.667 14.08 8.40 0.00 4.30
6887 10490 8.532819 CCTTAGGTGACATTATAATACTCCCTC 58.467 40.741 14.08 0.59 0.00 4.30
6888 10491 7.038231 GCCTTAGGTGACATTATAATACTCCCT 60.038 40.741 0.00 11.92 0.00 4.20
6889 10492 7.038231 AGCCTTAGGTGACATTATAATACTCCC 60.038 40.741 0.00 7.06 0.00 4.30
6890 10493 7.819900 CAGCCTTAGGTGACATTATAATACTCC 59.180 40.741 0.00 6.30 44.53 3.85
6891 10494 7.332182 GCAGCCTTAGGTGACATTATAATACTC 59.668 40.741 0.00 0.00 44.53 2.59
6892 10495 7.162082 GCAGCCTTAGGTGACATTATAATACT 58.838 38.462 0.00 0.00 44.53 2.12
6893 10496 6.090898 CGCAGCCTTAGGTGACATTATAATAC 59.909 42.308 0.00 0.00 44.53 1.89
6900 10503 3.159298 CGCAGCCTTAGGTGACATT 57.841 52.632 0.00 0.00 44.53 2.71
6915 10518 1.732941 AACACGATAATCCAAGCGCA 58.267 45.000 11.47 0.00 0.00 6.09
6917 10520 2.936498 AGGAAACACGATAATCCAAGCG 59.064 45.455 0.00 0.00 34.30 4.68
6940 10543 7.171848 GGCGTGTATATTTTACATGTGTATCCA 59.828 37.037 9.11 0.00 36.94 3.41
6949 10552 3.818773 GCAGGGGCGTGTATATTTTACAT 59.181 43.478 0.00 0.00 0.00 2.29
6957 10560 1.890625 AACGTGCAGGGGCGTGTATA 61.891 55.000 11.67 0.00 45.35 1.47
6959 10562 3.869473 GAACGTGCAGGGGCGTGTA 62.869 63.158 11.67 0.00 45.35 2.90
6976 10580 0.038435 TCCGGCACAAAACGATACGA 60.038 50.000 0.00 0.00 0.00 3.43
6977 10581 0.791422 TTCCGGCACAAAACGATACG 59.209 50.000 0.00 0.00 0.00 3.06
6987 10591 2.552599 TTACAGTGATTTCCGGCACA 57.447 45.000 11.77 0.00 37.48 4.57
6988 10592 3.252458 AGTTTTACAGTGATTTCCGGCAC 59.748 43.478 0.00 0.00 35.30 5.01
6989 10593 3.252215 CAGTTTTACAGTGATTTCCGGCA 59.748 43.478 0.00 0.00 0.00 5.69
7014 10618 9.502091 GCTTGGATGGACTGTAATGTAATATAA 57.498 33.333 0.00 0.00 0.00 0.98
7015 10619 7.817478 CGCTTGGATGGACTGTAATGTAATATA 59.183 37.037 0.00 0.00 0.00 0.86
7022 10651 1.331756 GCGCTTGGATGGACTGTAATG 59.668 52.381 0.00 0.00 0.00 1.90
7036 10665 0.451783 AATTCTTTAGGCCGCGCTTG 59.548 50.000 5.56 0.00 0.00 4.01
7043 10672 3.740832 GCACAACACAAATTCTTTAGGCC 59.259 43.478 0.00 0.00 0.00 5.19
7059 10688 1.222115 GACAGACTCGGGTGCACAAC 61.222 60.000 20.43 10.00 0.00 3.32
7062 10699 2.430921 CGACAGACTCGGGTGCAC 60.431 66.667 8.80 8.80 38.87 4.57
7092 10729 9.582431 CAGAAAGATCAATAAAACTGATGCAAT 57.418 29.630 0.00 0.00 33.63 3.56
7130 10770 3.054166 TCGCATGAAACGAATATACCCG 58.946 45.455 0.00 0.00 36.44 5.28
7221 10861 1.536284 GCCTGACTGTACGCATCTACC 60.536 57.143 0.00 0.00 0.00 3.18
7235 10875 1.222113 GCACTTCCCCTAGCCTGAC 59.778 63.158 0.00 0.00 0.00 3.51
7240 10880 0.033642 GTATCCGCACTTCCCCTAGC 59.966 60.000 0.00 0.00 0.00 3.42
7252 10892 8.372521 CAATTTTGATTTTACACAAGTATCCGC 58.627 33.333 0.00 0.00 0.00 5.54
7308 10948 2.828877 CTCGCCCGTACATCCATTAAA 58.171 47.619 0.00 0.00 0.00 1.52
7309 10949 1.539496 GCTCGCCCGTACATCCATTAA 60.539 52.381 0.00 0.00 0.00 1.40
7310 10950 0.032952 GCTCGCCCGTACATCCATTA 59.967 55.000 0.00 0.00 0.00 1.90
7311 10951 1.227556 GCTCGCCCGTACATCCATT 60.228 57.895 0.00 0.00 0.00 3.16
7312 10952 2.421739 GCTCGCCCGTACATCCAT 59.578 61.111 0.00 0.00 0.00 3.41
7313 10953 3.845259 GGCTCGCCCGTACATCCA 61.845 66.667 0.00 0.00 0.00 3.41
7326 10966 4.451150 TGGCATGGTCGTCGGCTC 62.451 66.667 0.00 0.00 0.00 4.70
7327 10967 4.760047 GTGGCATGGTCGTCGGCT 62.760 66.667 0.00 0.00 0.00 5.52
7329 10969 4.082523 AGGTGGCATGGTCGTCGG 62.083 66.667 0.00 0.00 0.00 4.79
7330 10970 2.815211 CAGGTGGCATGGTCGTCG 60.815 66.667 0.00 0.00 0.00 5.12
7331 10971 3.127533 GCAGGTGGCATGGTCGTC 61.128 66.667 0.00 0.00 43.97 4.20
7360 11000 4.980805 GACCAGACGCGTTGGCCA 62.981 66.667 28.59 0.00 39.39 5.36
7363 11003 4.657824 ACGGACCAGACGCGTTGG 62.658 66.667 27.65 27.65 41.60 3.77
7364 11004 3.103911 GACGGACCAGACGCGTTG 61.104 66.667 15.53 13.61 34.00 4.10
7365 11005 3.292936 AGACGGACCAGACGCGTT 61.293 61.111 15.53 0.00 34.00 4.84
7366 11006 4.039357 CAGACGGACCAGACGCGT 62.039 66.667 13.85 13.85 34.00 6.01
7369 11009 4.039357 ACGCAGACGGACCAGACG 62.039 66.667 0.00 0.00 46.04 4.18
7370 11010 2.430921 CACGCAGACGGACCAGAC 60.431 66.667 0.00 0.00 46.04 3.51
7371 11011 3.680786 CCACGCAGACGGACCAGA 61.681 66.667 0.00 0.00 46.04 3.86
7372 11012 3.680786 TCCACGCAGACGGACCAG 61.681 66.667 0.00 0.00 46.04 4.00
7373 11013 3.986006 GTCCACGCAGACGGACCA 61.986 66.667 0.00 0.00 43.93 4.02
7376 11016 2.910479 AGTGTCCACGCAGACGGA 60.910 61.111 1.47 0.00 46.04 4.69
7377 11017 2.734723 CAGTGTCCACGCAGACGG 60.735 66.667 1.47 0.00 46.04 4.79
7379 11019 1.664965 GTCCAGTGTCCACGCAGAC 60.665 63.158 0.00 0.00 37.28 3.51
7380 11020 2.131067 TGTCCAGTGTCCACGCAGA 61.131 57.895 0.00 0.00 36.20 4.26
7381 11021 1.956170 GTGTCCAGTGTCCACGCAG 60.956 63.158 0.00 0.00 36.20 5.18
7382 11022 2.108157 GTGTCCAGTGTCCACGCA 59.892 61.111 0.00 0.00 36.20 5.24
7383 11023 2.665185 GGTGTCCAGTGTCCACGC 60.665 66.667 4.02 0.00 36.20 5.34
7384 11024 2.030562 GGGTGTCCAGTGTCCACG 59.969 66.667 4.02 0.00 36.20 4.94
7385 11025 1.227853 GTGGGTGTCCAGTGTCCAC 60.228 63.158 0.00 0.00 45.05 4.02
7386 11026 2.802724 CGTGGGTGTCCAGTGTCCA 61.803 63.158 0.00 0.00 45.05 4.02
7387 11027 2.030562 CGTGGGTGTCCAGTGTCC 59.969 66.667 0.00 0.00 45.05 4.02
7388 11028 2.030562 CCGTGGGTGTCCAGTGTC 59.969 66.667 0.00 0.00 45.05 3.67
7389 11029 2.067605 TTCCGTGGGTGTCCAGTGT 61.068 57.895 0.00 0.00 45.05 3.55
7390 11030 1.597027 GTTCCGTGGGTGTCCAGTG 60.597 63.158 0.00 0.00 45.05 3.66
7391 11031 2.040009 CTGTTCCGTGGGTGTCCAGT 62.040 60.000 0.00 0.00 45.05 4.00
7392 11032 1.301716 CTGTTCCGTGGGTGTCCAG 60.302 63.158 0.00 0.00 45.05 3.86
7393 11033 1.338890 TTCTGTTCCGTGGGTGTCCA 61.339 55.000 0.00 0.00 41.58 4.02
7394 11034 0.179040 TTTCTGTTCCGTGGGTGTCC 60.179 55.000 0.00 0.00 0.00 4.02
7395 11035 1.535462 CATTTCTGTTCCGTGGGTGTC 59.465 52.381 0.00 0.00 0.00 3.67
7396 11036 1.133915 ACATTTCTGTTCCGTGGGTGT 60.134 47.619 0.00 0.00 28.70 4.16
7397 11037 1.604604 ACATTTCTGTTCCGTGGGTG 58.395 50.000 0.00 0.00 28.70 4.61
7398 11038 2.358322 AACATTTCTGTTCCGTGGGT 57.642 45.000 0.00 0.00 41.86 4.51
7406 11046 6.515272 AACAGACTTGTGAACATTTCTGTT 57.485 33.333 22.46 22.46 44.64 3.16
7407 11047 5.647658 TCAACAGACTTGTGAACATTTCTGT 59.352 36.000 16.26 16.26 43.97 3.41
7408 11048 6.037500 TCTCAACAGACTTGTGAACATTTCTG 59.962 38.462 15.34 15.34 39.30 3.02
7409 11049 6.115446 TCTCAACAGACTTGTGAACATTTCT 58.885 36.000 0.00 0.00 37.67 2.52
7410 11050 6.363577 TCTCAACAGACTTGTGAACATTTC 57.636 37.500 0.00 0.00 37.67 2.17
7411 11051 5.220931 GCTCTCAACAGACTTGTGAACATTT 60.221 40.000 0.00 0.00 37.67 2.32
7412 11052 4.274459 GCTCTCAACAGACTTGTGAACATT 59.726 41.667 0.00 0.00 37.67 2.71
7413 11053 3.812053 GCTCTCAACAGACTTGTGAACAT 59.188 43.478 0.00 0.00 37.67 2.71
7414 11054 3.198068 GCTCTCAACAGACTTGTGAACA 58.802 45.455 0.00 0.00 37.67 3.18
7415 11055 3.198068 TGCTCTCAACAGACTTGTGAAC 58.802 45.455 0.00 0.00 37.67 3.18
7416 11056 3.132824 TCTGCTCTCAACAGACTTGTGAA 59.867 43.478 0.00 0.00 39.21 3.18
7417 11057 2.695147 TCTGCTCTCAACAGACTTGTGA 59.305 45.455 0.00 0.00 39.21 3.58
7418 11058 3.058450 CTCTGCTCTCAACAGACTTGTG 58.942 50.000 0.00 0.00 39.21 3.33
7419 11059 2.697751 ACTCTGCTCTCAACAGACTTGT 59.302 45.455 0.00 0.00 39.21 3.16
7420 11060 3.383620 ACTCTGCTCTCAACAGACTTG 57.616 47.619 0.00 0.00 39.21 3.16
7421 11061 3.891977 TGTACTCTGCTCTCAACAGACTT 59.108 43.478 0.00 0.00 39.21 3.01
7422 11062 3.491342 TGTACTCTGCTCTCAACAGACT 58.509 45.455 0.00 0.00 39.21 3.24
7423 11063 3.924918 TGTACTCTGCTCTCAACAGAC 57.075 47.619 0.00 0.00 39.21 3.51
7424 11064 3.445450 GGATGTACTCTGCTCTCAACAGA 59.555 47.826 0.00 0.00 41.78 3.41
7425 11065 3.446873 AGGATGTACTCTGCTCTCAACAG 59.553 47.826 0.00 0.00 36.44 3.16
7426 11066 3.435275 AGGATGTACTCTGCTCTCAACA 58.565 45.455 0.00 0.00 0.00 3.33
7427 11067 3.699038 AGAGGATGTACTCTGCTCTCAAC 59.301 47.826 12.15 0.00 45.70 3.18
7428 11068 3.974719 AGAGGATGTACTCTGCTCTCAA 58.025 45.455 12.15 0.00 45.70 3.02
7429 11069 3.660970 AGAGGATGTACTCTGCTCTCA 57.339 47.619 12.15 0.00 45.70 3.27
7437 11077 4.810191 AACCTGAACAGAGGATGTACTC 57.190 45.455 3.19 0.00 43.00 2.59
7438 11078 5.568620 AAAACCTGAACAGAGGATGTACT 57.431 39.130 3.19 0.00 43.00 2.73
7439 11079 5.763204 TCAAAAACCTGAACAGAGGATGTAC 59.237 40.000 3.19 0.00 43.00 2.90
7440 11080 5.935945 TCAAAAACCTGAACAGAGGATGTA 58.064 37.500 3.19 0.00 43.00 2.29
7441 11081 4.792068 TCAAAAACCTGAACAGAGGATGT 58.208 39.130 3.19 0.00 46.97 3.06
7442 11082 5.766222 CTTCAAAAACCTGAACAGAGGATG 58.234 41.667 3.19 0.00 36.51 3.51
7443 11083 4.279420 GCTTCAAAAACCTGAACAGAGGAT 59.721 41.667 3.19 0.00 36.51 3.24
7444 11084 3.632145 GCTTCAAAAACCTGAACAGAGGA 59.368 43.478 3.19 0.00 36.51 3.71
7445 11085 3.381272 TGCTTCAAAAACCTGAACAGAGG 59.619 43.478 3.19 0.00 39.28 3.69
7446 11086 4.336433 TCTGCTTCAAAAACCTGAACAGAG 59.664 41.667 3.19 0.00 37.88 3.35
7447 11087 4.269183 TCTGCTTCAAAAACCTGAACAGA 58.731 39.130 3.19 11.29 39.02 3.41
7448 11088 4.096984 ACTCTGCTTCAAAAACCTGAACAG 59.903 41.667 0.00 0.00 36.65 3.16
7449 11089 4.016444 ACTCTGCTTCAAAAACCTGAACA 58.984 39.130 0.00 0.00 32.00 3.18
7450 11090 4.336713 AGACTCTGCTTCAAAAACCTGAAC 59.663 41.667 0.00 0.00 32.00 3.18
7451 11091 4.526970 AGACTCTGCTTCAAAAACCTGAA 58.473 39.130 0.00 0.00 34.22 3.02
7452 11092 4.130118 GAGACTCTGCTTCAAAAACCTGA 58.870 43.478 0.00 0.00 0.00 3.86
7453 11093 4.133078 AGAGACTCTGCTTCAAAAACCTG 58.867 43.478 3.56 0.00 0.00 4.00
7454 11094 4.429854 AGAGACTCTGCTTCAAAAACCT 57.570 40.909 3.56 0.00 0.00 3.50
7455 11095 4.023622 GGAAGAGACTCTGCTTCAAAAACC 60.024 45.833 10.43 0.00 41.69 3.27
7456 11096 4.576463 TGGAAGAGACTCTGCTTCAAAAAC 59.424 41.667 10.43 0.00 41.69 2.43
7457 11097 4.780815 TGGAAGAGACTCTGCTTCAAAAA 58.219 39.130 10.43 0.00 41.69 1.94
7458 11098 4.422073 TGGAAGAGACTCTGCTTCAAAA 57.578 40.909 10.43 0.00 41.69 2.44
7459 11099 4.630644 ATGGAAGAGACTCTGCTTCAAA 57.369 40.909 10.43 0.00 41.69 2.69
7460 11100 4.630644 AATGGAAGAGACTCTGCTTCAA 57.369 40.909 10.43 0.00 41.69 2.69
7461 11101 4.630644 AAATGGAAGAGACTCTGCTTCA 57.369 40.909 10.43 1.30 41.69 3.02
7462 11102 5.335504 CCAAAAATGGAAGAGACTCTGCTTC 60.336 44.000 10.43 2.42 39.74 3.86
7463 11103 4.522022 CCAAAAATGGAAGAGACTCTGCTT 59.478 41.667 10.43 0.00 0.00 3.91
7464 11104 4.077822 CCAAAAATGGAAGAGACTCTGCT 58.922 43.478 10.43 0.00 0.00 4.24
7465 11105 3.192212 CCCAAAAATGGAAGAGACTCTGC 59.808 47.826 5.55 3.30 0.00 4.26
7466 11106 3.760684 CCCCAAAAATGGAAGAGACTCTG 59.239 47.826 5.55 0.00 0.00 3.35
7467 11107 3.657727 TCCCCAAAAATGGAAGAGACTCT 59.342 43.478 0.00 0.00 0.00 3.24
7468 11108 3.759086 GTCCCCAAAAATGGAAGAGACTC 59.241 47.826 0.00 0.00 31.03 3.36
7469 11109 3.140144 TGTCCCCAAAAATGGAAGAGACT 59.860 43.478 0.00 0.00 31.03 3.24
7470 11110 3.496331 TGTCCCCAAAAATGGAAGAGAC 58.504 45.455 0.00 0.00 31.03 3.36
7471 11111 3.893753 TGTCCCCAAAAATGGAAGAGA 57.106 42.857 0.00 0.00 31.03 3.10
7472 11112 3.259123 CCTTGTCCCCAAAAATGGAAGAG 59.741 47.826 0.00 0.00 31.03 2.85
7473 11113 3.238597 CCTTGTCCCCAAAAATGGAAGA 58.761 45.455 0.00 0.00 31.03 2.87
7474 11114 2.289631 GCCTTGTCCCCAAAAATGGAAG 60.290 50.000 0.00 0.00 31.03 3.46
7475 11115 1.696884 GCCTTGTCCCCAAAAATGGAA 59.303 47.619 0.00 0.00 31.03 3.53
7476 11116 1.347062 GCCTTGTCCCCAAAAATGGA 58.653 50.000 0.00 0.00 0.00 3.41
7477 11117 0.324614 GGCCTTGTCCCCAAAAATGG 59.675 55.000 0.00 0.00 0.00 3.16
7478 11118 1.055040 TGGCCTTGTCCCCAAAAATG 58.945 50.000 3.32 0.00 0.00 2.32
7479 11119 1.813102 TTGGCCTTGTCCCCAAAAAT 58.187 45.000 3.32 0.00 38.12 1.82
7480 11120 1.813102 ATTGGCCTTGTCCCCAAAAA 58.187 45.000 3.32 0.00 43.70 1.94
7481 11121 2.534990 CTATTGGCCTTGTCCCCAAAA 58.465 47.619 3.32 0.00 43.70 2.44
7482 11122 1.272985 CCTATTGGCCTTGTCCCCAAA 60.273 52.381 3.32 0.00 43.70 3.28
7483 11123 0.334676 CCTATTGGCCTTGTCCCCAA 59.665 55.000 3.32 0.00 44.51 4.12
7484 11124 2.006748 CCTATTGGCCTTGTCCCCA 58.993 57.895 3.32 0.00 0.00 4.96
7503 11143 3.766691 GCAACAGGCAGGCCATGG 61.767 66.667 13.63 7.63 43.97 3.66
7504 11144 3.766691 GGCAACAGGCAGGCCATG 61.767 66.667 13.63 10.19 46.92 3.66
7542 11182 2.956964 GATTGACGAGCTCCCGCG 60.957 66.667 8.47 0.00 42.32 6.46
7543 11183 1.880340 CAGATTGACGAGCTCCCGC 60.880 63.158 8.47 0.00 0.00 6.13
7544 11184 0.738975 TACAGATTGACGAGCTCCCG 59.261 55.000 8.47 0.00 0.00 5.14
7545 11185 2.101582 ACATACAGATTGACGAGCTCCC 59.898 50.000 8.47 0.57 0.00 4.30
7546 11186 3.444703 ACATACAGATTGACGAGCTCC 57.555 47.619 8.47 0.00 0.00 4.70
7547 11187 3.553511 CCAACATACAGATTGACGAGCTC 59.446 47.826 2.73 2.73 0.00 4.09
7548 11188 3.525537 CCAACATACAGATTGACGAGCT 58.474 45.455 0.00 0.00 0.00 4.09
7549 11189 2.609459 CCCAACATACAGATTGACGAGC 59.391 50.000 0.00 0.00 0.00 5.03
7550 11190 3.118775 TCCCCAACATACAGATTGACGAG 60.119 47.826 0.00 0.00 0.00 4.18
7551 11191 2.835156 TCCCCAACATACAGATTGACGA 59.165 45.455 0.00 0.00 0.00 4.20
7552 11192 3.198068 CTCCCCAACATACAGATTGACG 58.802 50.000 0.00 0.00 0.00 4.35
7553 11193 2.945668 GCTCCCCAACATACAGATTGAC 59.054 50.000 0.00 0.00 0.00 3.18
7554 11194 2.419990 CGCTCCCCAACATACAGATTGA 60.420 50.000 0.00 0.00 0.00 2.57
7555 11195 1.942657 CGCTCCCCAACATACAGATTG 59.057 52.381 0.00 0.00 0.00 2.67
7556 11196 1.559682 ACGCTCCCCAACATACAGATT 59.440 47.619 0.00 0.00 0.00 2.40
7557 11197 1.204146 ACGCTCCCCAACATACAGAT 58.796 50.000 0.00 0.00 0.00 2.90
7558 11198 1.855295 TACGCTCCCCAACATACAGA 58.145 50.000 0.00 0.00 0.00 3.41
7559 11199 2.365617 AGATACGCTCCCCAACATACAG 59.634 50.000 0.00 0.00 0.00 2.74
7560 11200 2.102420 CAGATACGCTCCCCAACATACA 59.898 50.000 0.00 0.00 0.00 2.29
7561 11201 2.755650 CAGATACGCTCCCCAACATAC 58.244 52.381 0.00 0.00 0.00 2.39
7562 11202 1.070134 GCAGATACGCTCCCCAACATA 59.930 52.381 0.00 0.00 0.00 2.29
7563 11203 0.179045 GCAGATACGCTCCCCAACAT 60.179 55.000 0.00 0.00 0.00 2.71
7564 11204 1.220749 GCAGATACGCTCCCCAACA 59.779 57.895 0.00 0.00 0.00 3.33
7565 11205 1.523938 GGCAGATACGCTCCCCAAC 60.524 63.158 0.00 0.00 0.00 3.77
7566 11206 2.742116 GGGCAGATACGCTCCCCAA 61.742 63.158 0.00 0.00 35.75 4.12
7567 11207 3.161450 GGGCAGATACGCTCCCCA 61.161 66.667 0.00 0.00 35.75 4.96
7568 11208 4.301027 CGGGCAGATACGCTCCCC 62.301 72.222 0.00 0.00 33.09 4.81
7569 11209 4.301027 CCGGGCAGATACGCTCCC 62.301 72.222 0.00 0.00 33.25 4.30
7570 11210 4.971125 GCCGGGCAGATACGCTCC 62.971 72.222 15.62 0.00 0.00 4.70
7571 11211 4.221422 TGCCGGGCAGATACGCTC 62.221 66.667 19.77 0.00 33.32 5.03
7585 11225 2.978452 ATACATCACGCGGCTCTGCC 62.978 60.000 12.47 0.00 46.75 4.85
7586 11226 1.154205 AATACATCACGCGGCTCTGC 61.154 55.000 12.47 0.00 0.00 4.26
7587 11227 2.977700 AATACATCACGCGGCTCTG 58.022 52.632 12.47 4.79 0.00 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.