Multiple sequence alignment - TraesCS2A01G023400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G023400 chr2A 100.000 8875 0 0 1 8875 11380765 11371891 0.000000e+00 16390.0
1 TraesCS2A01G023400 chr2A 75.593 717 134 22 1023 1712 2377888 2378590 5.170000e-82 316.0
2 TraesCS2A01G023400 chr2A 84.718 301 45 1 8228 8528 711057823 711058122 5.210000e-77 300.0
3 TraesCS2A01G023400 chr2A 82.353 221 34 5 8615 8833 27603493 27603710 4.230000e-43 187.0
4 TraesCS2A01G023400 chr2D 98.295 4282 55 6 3141 7412 10833274 10829001 0.000000e+00 7487.0
5 TraesCS2A01G023400 chr2D 95.831 1775 38 5 1 1774 10836433 10834694 0.000000e+00 2835.0
6 TraesCS2A01G023400 chr2D 90.955 785 35 8 8077 8844 10827122 10826357 0.000000e+00 1024.0
7 TraesCS2A01G023400 chr2D 92.038 628 14 5 7399 8019 10827731 10827133 0.000000e+00 850.0
8 TraesCS2A01G023400 chr2D 83.713 307 48 1 1409 1715 2543967 2543663 1.130000e-73 289.0
9 TraesCS2A01G023400 chr2D 87.363 182 18 4 1983 2164 10833444 10833268 4.200000e-48 204.0
10 TraesCS2A01G023400 chr2D 84.239 184 26 3 8652 8833 36218500 36218682 9.160000e-40 176.0
11 TraesCS2A01G023400 chr2D 88.889 90 7 3 8040 8128 326789084 326788997 3.390000e-19 108.0
12 TraesCS2A01G023400 chr2B 83.446 1927 278 21 3169 5062 16248952 16247034 0.000000e+00 1753.0
13 TraesCS2A01G023400 chr2B 83.026 1791 272 16 3162 4930 16194998 16196778 0.000000e+00 1594.0
14 TraesCS2A01G023400 chr2B 83.151 730 103 13 971 1690 16260922 16260203 0.000000e+00 649.0
15 TraesCS2A01G023400 chr2B 84.385 301 46 1 8228 8528 382936430 382936131 2.420000e-75 294.0
16 TraesCS2A01G023400 chr2B 76.000 475 84 17 5101 5549 16247023 16246553 1.500000e-52 219.0
17 TraesCS2A01G023400 chr2B 88.889 90 9 1 8040 8128 542555981 542556070 9.420000e-20 110.0
18 TraesCS2A01G023400 chr1B 83.539 1780 263 10 3167 4916 4869662 4867883 0.000000e+00 1637.0
19 TraesCS2A01G023400 chr1B 82.369 726 109 12 985 1702 4877371 4876657 1.640000e-171 614.0
20 TraesCS2A01G023400 chr1B 82.511 223 32 4 4714 4932 4867903 4867684 1.180000e-43 189.0
21 TraesCS2A01G023400 chr1B 87.097 62 7 1 2921 2982 624834792 624834732 1.600000e-07 69.4
22 TraesCS2A01G023400 chr1B 77.064 109 21 4 7268 7374 480898663 480898769 9.620000e-05 60.2
23 TraesCS2A01G023400 chr4A 88.945 787 55 15 2366 3140 631133255 631134021 0.000000e+00 942.0
24 TraesCS2A01G023400 chr4A 81.122 392 38 15 2162 2534 724620796 724621170 1.890000e-71 281.0
25 TraesCS2A01G023400 chr4A 92.537 67 5 0 3074 3140 724621917 724621983 7.330000e-16 97.1
26 TraesCS2A01G023400 chr4A 81.000 100 15 4 7278 7374 580297643 580297741 9.550000e-10 76.8
27 TraesCS2A01G023400 chr5D 85.149 303 45 0 8228 8530 414239030 414238728 2.410000e-80 311.0
28 TraesCS2A01G023400 chr5D 87.574 169 20 1 8040 8207 453133793 453133625 2.530000e-45 195.0
29 TraesCS2A01G023400 chr5D 83.784 185 22 8 8652 8833 451620671 451620492 1.530000e-37 169.0
30 TraesCS2A01G023400 chr5D 77.817 284 45 7 7921 8204 364232109 364231844 9.220000e-35 159.0
31 TraesCS2A01G023400 chr5D 93.023 43 2 1 7390 7432 439674853 439674894 2.680000e-05 62.1
32 TraesCS2A01G023400 chr4D 85.149 303 44 1 8228 8530 503614633 503614934 8.650000e-80 309.0
33 TraesCS2A01G023400 chr4D 89.655 174 15 2 772 942 314930301 314930474 1.500000e-52 219.0
34 TraesCS2A01G023400 chr4D 90.000 170 16 1 770 938 326382612 326382443 1.500000e-52 219.0
35 TraesCS2A01G023400 chr4D 85.629 167 21 3 8040 8204 8133235 8133400 1.180000e-38 172.0
36 TraesCS2A01G023400 chr7A 84.868 304 43 3 8229 8530 136464177 136464479 4.030000e-78 303.0
37 TraesCS2A01G023400 chr7A 82.734 139 18 5 8091 8224 641726279 641726142 1.570000e-22 119.0
38 TraesCS2A01G023400 chr7A 89.552 67 7 0 3074 3140 40332132 40332198 1.590000e-12 86.1
39 TraesCS2A01G023400 chr3B 83.389 301 45 2 8228 8528 104721169 104720874 3.160000e-69 274.0
40 TraesCS2A01G023400 chr3B 97.222 36 1 0 7339 7374 812340198 812340233 2.680000e-05 62.1
41 TraesCS2A01G023400 chr1A 82.895 304 49 3 8228 8530 66703519 66703218 4.080000e-68 270.0
42 TraesCS2A01G023400 chr1A 92.169 166 12 1 773 937 441240914 441240749 5.360000e-57 233.0
43 TraesCS2A01G023400 chr1A 87.952 166 19 1 8040 8204 344116442 344116607 2.530000e-45 195.0
44 TraesCS2A01G023400 chr1A 80.531 226 35 8 8611 8833 150005599 150005380 1.980000e-36 165.0
45 TraesCS2A01G023400 chr1A 80.543 221 38 5 8615 8833 472152345 472152562 1.980000e-36 165.0
46 TraesCS2A01G023400 chr1A 83.444 151 24 1 8057 8207 453567920 453567771 1.200000e-28 139.0
47 TraesCS2A01G023400 chr1A 84.071 113 14 4 7264 7375 458568057 458567948 1.220000e-18 106.0
48 TraesCS2A01G023400 chr3A 83.333 288 47 1 8243 8530 544165153 544164867 1.900000e-66 265.0
49 TraesCS2A01G023400 chr3A 79.581 191 31 6 8040 8227 558866990 558867175 7.230000e-26 130.0
50 TraesCS2A01G023400 chr3A 94.444 36 2 0 7339 7374 734786098 734786133 1.000000e-03 56.5
51 TraesCS2A01G023400 chr3D 90.503 179 13 4 770 947 187836305 187836480 5.360000e-57 233.0
52 TraesCS2A01G023400 chr3D 77.817 284 44 7 7921 8204 536203505 536203241 3.320000e-34 158.0
53 TraesCS2A01G023400 chr3D 90.000 90 8 1 8040 8128 448290655 448290566 2.020000e-21 115.0
54 TraesCS2A01G023400 chr3D 93.182 44 3 0 7381 7424 466817896 466817853 2.070000e-06 65.8
55 TraesCS2A01G023400 chr5B 91.018 167 14 1 771 936 541684156 541683990 3.220000e-54 224.0
56 TraesCS2A01G023400 chr7D 89.326 178 17 2 762 937 83345023 83344846 1.160000e-53 222.0
57 TraesCS2A01G023400 chr7D 88.701 177 17 2 773 948 500775618 500775444 6.980000e-51 213.0
58 TraesCS2A01G023400 chr7D 82.609 115 19 1 7923 8037 258229493 258229606 5.670000e-17 100.0
59 TraesCS2A01G023400 chr7D 79.661 118 22 2 7921 8037 629538874 629538758 5.710000e-12 84.2
60 TraesCS2A01G023400 chr7B 90.303 165 15 1 770 933 102234314 102234478 1.940000e-51 215.0
61 TraesCS2A01G023400 chr7B 93.333 60 4 0 3081 3140 619368039 619368098 1.230000e-13 89.8
62 TraesCS2A01G023400 chr7B 88.235 68 6 2 3081 3148 642461890 642461955 7.390000e-11 80.5
63 TraesCS2A01G023400 chr5A 81.778 225 36 5 8611 8833 205012805 205013026 5.470000e-42 183.0
64 TraesCS2A01G023400 chr5A 82.051 195 31 4 8641 8833 703148938 703149130 7.130000e-36 163.0
65 TraesCS2A01G023400 chr4B 79.646 226 38 8 8609 8831 276017187 276017407 1.190000e-33 156.0
66 TraesCS2A01G023400 chr4B 84.685 111 16 1 7921 8031 21468982 21469091 9.420000e-20 110.0
67 TraesCS2A01G023400 chrUn 76.950 282 44 8 7923 8203 335703955 335703694 3.340000e-29 141.0
68 TraesCS2A01G023400 chr6A 91.026 78 6 1 3074 3151 601378655 601378731 4.380000e-18 104.0
69 TraesCS2A01G023400 chr6A 94.030 67 4 0 3074 3140 691614 691680 1.580000e-17 102.0
70 TraesCS2A01G023400 chr6A 74.224 322 46 16 7921 8227 596592867 596592568 5.670000e-17 100.0
71 TraesCS2A01G023400 chr6A 89.552 67 7 0 3074 3140 570929900 570929834 1.590000e-12 86.1
72 TraesCS2A01G023400 chr1D 82.143 112 20 0 7920 8031 192915447 192915558 7.330000e-16 97.1
73 TraesCS2A01G023400 chr6B 91.176 68 5 1 3074 3140 585911791 585911724 3.410000e-14 91.6
74 TraesCS2A01G023400 chr6D 85.246 61 7 2 7315 7374 27493987 27494046 2.680000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G023400 chr2A 11371891 11380765 8874 True 16390 16390 100.0000 1 8875 1 chr2A.!!$R1 8874
1 TraesCS2A01G023400 chr2A 2377888 2378590 702 False 316 316 75.5930 1023 1712 1 chr2A.!!$F1 689
2 TraesCS2A01G023400 chr2D 10826357 10836433 10076 True 2480 7487 92.8964 1 8844 5 chr2D.!!$R3 8843
3 TraesCS2A01G023400 chr2B 16194998 16196778 1780 False 1594 1594 83.0260 3162 4930 1 chr2B.!!$F1 1768
4 TraesCS2A01G023400 chr2B 16246553 16248952 2399 True 986 1753 79.7230 3169 5549 2 chr2B.!!$R3 2380
5 TraesCS2A01G023400 chr2B 16260203 16260922 719 True 649 649 83.1510 971 1690 1 chr2B.!!$R1 719
6 TraesCS2A01G023400 chr1B 4867684 4869662 1978 True 913 1637 83.0250 3167 4932 2 chr1B.!!$R3 1765
7 TraesCS2A01G023400 chr1B 4876657 4877371 714 True 614 614 82.3690 985 1702 1 chr1B.!!$R1 717
8 TraesCS2A01G023400 chr4A 631133255 631134021 766 False 942 942 88.9450 2366 3140 1 chr4A.!!$F2 774

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
168 169 0.177604 CGCATCAGCTCCCTCTTCTT 59.822 55.000 0.00 0.0 39.10 2.52 F
1261 1275 0.677731 CATGTCACCGTTCATGGGCT 60.678 55.000 0.00 0.0 38.10 5.19 F
1825 1854 0.099436 GCCACGTTCCATGCTCATTC 59.901 55.000 0.00 0.0 0.00 2.67 F
2362 3432 0.176449 GGCACATGCTTCCCCAATTC 59.824 55.000 3.48 0.0 41.70 2.17 F
3151 4233 0.036388 CGCCACTGGTTCCACATACT 60.036 55.000 0.00 0.0 0.00 2.12 F
3152 4234 1.610624 CGCCACTGGTTCCACATACTT 60.611 52.381 0.00 0.0 0.00 2.24 F
3153 4235 2.084546 GCCACTGGTTCCACATACTTC 58.915 52.381 0.00 0.0 0.00 3.01 F
3154 4236 2.290323 GCCACTGGTTCCACATACTTCT 60.290 50.000 0.00 0.0 0.00 2.85 F
3155 4237 3.055385 GCCACTGGTTCCACATACTTCTA 60.055 47.826 0.00 0.0 0.00 2.10 F
4970 6292 4.081142 ACCCATCGACATCAAGTGAACATA 60.081 41.667 0.00 0.0 0.00 2.29 F
5410 6758 1.271597 ACCAGGAGAAGTGATGGCAAC 60.272 52.381 0.00 0.0 36.21 4.17 F
6522 7881 1.733526 GGCAAAAGTGGCGAGTGTT 59.266 52.632 0.00 0.0 40.97 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1806 1835 0.099436 GAATGAGCATGGAACGTGGC 59.901 55.000 0.00 0.0 0.00 5.01 R
2349 3419 0.032217 GATGGGGAATTGGGGAAGCA 60.032 55.000 0.00 0.0 0.00 3.91 R
3012 4094 0.239082 TAGCGTGTAGTGTGTGACGG 59.761 55.000 0.00 0.0 32.45 4.79 R
3962 5056 1.612950 TGCTGGTGTAGTTGCAAATGG 59.387 47.619 10.14 0.0 32.12 3.16 R
4981 6303 1.268079 GCTTGCTGGGACTCTTGTTTC 59.732 52.381 0.00 0.0 0.00 2.78 R
5049 6371 4.825085 GTGTTGAACCAGGATAAGAAACCA 59.175 41.667 0.00 0.0 0.00 3.67 R
5132 6454 7.175104 TGGCTAATTAATCCTCAGTTTGTCTT 58.825 34.615 0.00 0.0 0.00 3.01 R
5233 6556 6.183360 ACAATAAAAGGTGGAAGTTGAGTTGG 60.183 38.462 0.00 0.0 0.00 3.77 R
5278 6601 3.760738 TGCACCTGTCAAATCCATGTAA 58.239 40.909 0.00 0.0 0.00 2.41 R
6082 7431 0.407528 AGTCTCTGCCCTCTGAGTGA 59.592 55.000 3.66 0.0 38.80 3.41 R
7330 8689 1.398390 GGAAACTGCCATCATCACGAC 59.602 52.381 0.00 0.0 0.00 4.34 R
8051 10700 0.036732 GACATGAGGGGTGCTGTCAA 59.963 55.000 0.00 0.0 38.28 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.126001 GACATCTGACCCAAACAGACA 57.874 47.619 0.00 0.00 45.19 3.41
21 22 3.476552 GACATCTGACCCAAACAGACAA 58.523 45.455 0.00 0.00 45.19 3.18
48 49 1.371512 CAGGCAAAAATGCGCGTGA 60.372 52.632 8.43 0.00 44.61 4.35
168 169 0.177604 CGCATCAGCTCCCTCTTCTT 59.822 55.000 0.00 0.00 39.10 2.52
180 181 2.191400 CCTCTTCTTCCCATCCACTCA 58.809 52.381 0.00 0.00 0.00 3.41
193 194 3.469008 TCCACTCAACCTAACACACAG 57.531 47.619 0.00 0.00 0.00 3.66
282 283 0.694771 ATCCTTGCTCAGTTGCTCCA 59.305 50.000 0.00 0.00 0.00 3.86
300 301 3.038280 TCCATCGATCACCATGGTAAGT 58.962 45.455 19.28 6.29 40.59 2.24
302 303 4.651962 TCCATCGATCACCATGGTAAGTAA 59.348 41.667 19.28 3.87 40.59 2.24
315 316 7.106239 CCATGGTAAGTAACAACTCTGATTCT 58.894 38.462 2.57 0.00 0.00 2.40
319 320 6.308282 GGTAAGTAACAACTCTGATTCTGTCG 59.692 42.308 0.00 0.00 0.00 4.35
343 344 6.849811 CGCATCAAAATCATCTTACTTGCTAG 59.150 38.462 0.00 0.00 0.00 3.42
352 353 6.878317 TCATCTTACTTGCTAGCTGTGTAAT 58.122 36.000 17.23 5.97 0.00 1.89
354 355 8.474831 TCATCTTACTTGCTAGCTGTGTAATTA 58.525 33.333 17.23 12.30 0.00 1.40
532 533 3.518998 AGCGTCGGACCGGATCAG 61.519 66.667 15.25 2.86 0.00 2.90
533 534 4.570663 GCGTCGGACCGGATCAGG 62.571 72.222 15.25 10.69 37.30 3.86
534 535 4.570663 CGTCGGACCGGATCAGGC 62.571 72.222 15.25 3.38 33.69 4.85
535 536 4.570663 GTCGGACCGGATCAGGCG 62.571 72.222 15.25 8.59 33.69 5.52
536 537 4.807631 TCGGACCGGATCAGGCGA 62.808 66.667 15.25 10.85 33.69 5.54
537 538 3.606662 CGGACCGGATCAGGCGAT 61.607 66.667 9.46 0.00 33.69 4.58
538 539 2.340443 GGACCGGATCAGGCGATC 59.660 66.667 9.46 2.14 46.34 3.69
544 545 3.929389 GATCAGGCGATCGTCAGC 58.071 61.111 23.45 0.11 38.84 4.26
545 546 2.013483 GATCAGGCGATCGTCAGCG 61.013 63.158 23.45 9.95 38.84 5.18
546 547 2.669808 GATCAGGCGATCGTCAGCGT 62.670 60.000 23.45 6.01 38.84 5.07
547 548 2.669808 ATCAGGCGATCGTCAGCGTC 62.670 60.000 23.45 0.00 39.49 5.19
548 549 4.538283 AGGCGATCGTCAGCGTCG 62.538 66.667 23.45 0.00 41.15 5.12
550 551 4.531912 GCGATCGTCAGCGTCGGA 62.532 66.667 17.81 0.00 39.81 4.55
551 552 2.648102 CGATCGTCAGCGTCGGAC 60.648 66.667 7.03 0.00 37.69 4.79
552 553 2.278013 GATCGTCAGCGTCGGACC 60.278 66.667 1.91 0.00 39.49 4.46
553 554 4.175489 ATCGTCAGCGTCGGACCG 62.175 66.667 7.84 7.84 39.49 4.79
556 557 3.823330 GTCAGCGTCGGACCGGAT 61.823 66.667 15.25 0.00 0.00 4.18
557 558 3.515286 TCAGCGTCGGACCGGATC 61.515 66.667 15.25 1.18 0.00 3.36
558 559 3.822192 CAGCGTCGGACCGGATCA 61.822 66.667 15.25 0.00 0.00 2.92
581 582 0.867753 CGAGAAGAATCCTGACCGCG 60.868 60.000 0.00 0.00 0.00 6.46
705 706 3.084039 AGATTTTTCGGCTTCTGCATCA 58.916 40.909 0.00 0.00 41.91 3.07
779 780 7.048512 CCCAATTTATTATCGATCTACTCCCC 58.951 42.308 0.00 0.00 0.00 4.81
840 841 9.862371 ATATAGACTATTACGGAGCAAAATGAG 57.138 33.333 0.00 0.00 0.00 2.90
863 864 4.863131 GTGAATCTACACTCTAAACCACGG 59.137 45.833 0.00 0.00 37.73 4.94
871 872 6.081872 ACACTCTAAACCACGGCTATATAC 57.918 41.667 0.00 0.00 0.00 1.47
880 881 7.949690 AACCACGGCTATATACATCTGTATA 57.050 36.000 11.40 11.40 44.66 1.47
1251 1265 1.086696 GGATCCACAACATGTCACCG 58.913 55.000 6.95 0.00 0.00 4.94
1261 1275 0.677731 CATGTCACCGTTCATGGGCT 60.678 55.000 0.00 0.00 38.10 5.19
1324 1338 4.722700 GCGTCCCCAGCCACACAT 62.723 66.667 0.00 0.00 0.00 3.21
1692 1721 5.940470 GCATCTACAGGATAAAAGGTATGGG 59.060 44.000 0.00 0.00 32.64 4.00
1717 1746 2.158769 TCTTGGCCCTATGCACACTATG 60.159 50.000 0.00 0.00 43.89 2.23
1776 1805 9.288576 AGTTTCATCATTCTGAGAAACATTACA 57.711 29.630 20.94 0.00 41.47 2.41
1777 1806 9.897744 GTTTCATCATTCTGAGAAACATTACAA 57.102 29.630 17.54 0.00 40.30 2.41
1779 1808 8.853077 TCATCATTCTGAGAAACATTACAAGT 57.147 30.769 0.00 0.00 0.00 3.16
1780 1809 8.939929 TCATCATTCTGAGAAACATTACAAGTC 58.060 33.333 0.00 0.00 0.00 3.01
1781 1810 8.724229 CATCATTCTGAGAAACATTACAAGTCA 58.276 33.333 0.00 0.00 0.00 3.41
1782 1811 8.675705 TCATTCTGAGAAACATTACAAGTCAA 57.324 30.769 0.00 0.00 0.00 3.18
1783 1812 8.559536 TCATTCTGAGAAACATTACAAGTCAAC 58.440 33.333 0.00 0.00 0.00 3.18
1784 1813 6.861065 TCTGAGAAACATTACAAGTCAACC 57.139 37.500 0.00 0.00 0.00 3.77
1785 1814 6.591935 TCTGAGAAACATTACAAGTCAACCT 58.408 36.000 0.00 0.00 0.00 3.50
1786 1815 7.054124 TCTGAGAAACATTACAAGTCAACCTT 58.946 34.615 0.00 0.00 0.00 3.50
1787 1816 7.556275 TCTGAGAAACATTACAAGTCAACCTTT 59.444 33.333 0.00 0.00 0.00 3.11
1788 1817 8.062065 TGAGAAACATTACAAGTCAACCTTTT 57.938 30.769 0.00 0.00 0.00 2.27
1789 1818 9.179909 TGAGAAACATTACAAGTCAACCTTTTA 57.820 29.630 0.00 0.00 0.00 1.52
1790 1819 9.665264 GAGAAACATTACAAGTCAACCTTTTAG 57.335 33.333 0.00 0.00 0.00 1.85
1791 1820 9.403583 AGAAACATTACAAGTCAACCTTTTAGA 57.596 29.630 0.00 0.00 0.00 2.10
1794 1823 8.918202 ACATTACAAGTCAACCTTTTAGATCA 57.082 30.769 0.00 0.00 0.00 2.92
1795 1824 9.003658 ACATTACAAGTCAACCTTTTAGATCAG 57.996 33.333 0.00 0.00 0.00 2.90
1796 1825 9.219603 CATTACAAGTCAACCTTTTAGATCAGA 57.780 33.333 0.00 0.00 0.00 3.27
1797 1826 8.833231 TTACAAGTCAACCTTTTAGATCAGAG 57.167 34.615 0.00 0.00 0.00 3.35
1798 1827 6.831976 ACAAGTCAACCTTTTAGATCAGAGT 58.168 36.000 0.00 0.00 0.00 3.24
1799 1828 6.708054 ACAAGTCAACCTTTTAGATCAGAGTG 59.292 38.462 0.00 0.00 0.00 3.51
1800 1829 6.426646 AGTCAACCTTTTAGATCAGAGTGT 57.573 37.500 0.00 0.00 0.00 3.55
1801 1830 6.459923 AGTCAACCTTTTAGATCAGAGTGTC 58.540 40.000 0.00 0.00 0.00 3.67
1802 1831 6.268847 AGTCAACCTTTTAGATCAGAGTGTCT 59.731 38.462 0.00 0.00 0.00 3.41
1803 1832 6.931840 GTCAACCTTTTAGATCAGAGTGTCTT 59.068 38.462 0.00 0.00 0.00 3.01
1804 1833 8.088981 GTCAACCTTTTAGATCAGAGTGTCTTA 58.911 37.037 0.00 0.00 0.00 2.10
1805 1834 8.816894 TCAACCTTTTAGATCAGAGTGTCTTAT 58.183 33.333 0.00 0.00 0.00 1.73
1806 1835 8.877779 CAACCTTTTAGATCAGAGTGTCTTATG 58.122 37.037 0.00 0.00 0.00 1.90
1807 1836 7.044798 ACCTTTTAGATCAGAGTGTCTTATGC 58.955 38.462 0.00 0.00 0.00 3.14
1808 1837 6.481644 CCTTTTAGATCAGAGTGTCTTATGCC 59.518 42.308 0.00 0.00 0.00 4.40
1809 1838 6.544928 TTTAGATCAGAGTGTCTTATGCCA 57.455 37.500 0.00 0.00 0.00 4.92
1810 1839 4.399004 AGATCAGAGTGTCTTATGCCAC 57.601 45.455 0.00 0.00 0.00 5.01
1811 1840 2.654749 TCAGAGTGTCTTATGCCACG 57.345 50.000 0.00 0.00 36.69 4.94
1812 1841 1.893137 TCAGAGTGTCTTATGCCACGT 59.107 47.619 0.00 0.00 36.69 4.49
1813 1842 2.299013 TCAGAGTGTCTTATGCCACGTT 59.701 45.455 0.00 0.00 36.69 3.99
1814 1843 2.668457 CAGAGTGTCTTATGCCACGTTC 59.332 50.000 0.00 0.00 36.69 3.95
1815 1844 2.000447 GAGTGTCTTATGCCACGTTCC 59.000 52.381 0.00 0.00 36.69 3.62
1816 1845 1.346395 AGTGTCTTATGCCACGTTCCA 59.654 47.619 0.00 0.00 36.69 3.53
1817 1846 2.027192 AGTGTCTTATGCCACGTTCCAT 60.027 45.455 3.50 3.50 36.69 3.41
1818 1847 2.095853 GTGTCTTATGCCACGTTCCATG 59.904 50.000 7.72 0.00 0.00 3.66
1819 1848 1.064060 GTCTTATGCCACGTTCCATGC 59.936 52.381 7.72 0.00 0.00 4.06
1820 1849 1.065491 TCTTATGCCACGTTCCATGCT 60.065 47.619 7.72 0.00 0.00 3.79
1821 1850 1.331756 CTTATGCCACGTTCCATGCTC 59.668 52.381 7.72 0.00 0.00 4.26
1822 1851 0.251634 TATGCCACGTTCCATGCTCA 59.748 50.000 7.72 0.00 0.00 4.26
1823 1852 0.394762 ATGCCACGTTCCATGCTCAT 60.395 50.000 0.00 0.00 0.00 2.90
1824 1853 0.608856 TGCCACGTTCCATGCTCATT 60.609 50.000 0.00 0.00 0.00 2.57
1825 1854 0.099436 GCCACGTTCCATGCTCATTC 59.901 55.000 0.00 0.00 0.00 2.67
1826 1855 0.734889 CCACGTTCCATGCTCATTCC 59.265 55.000 0.00 0.00 0.00 3.01
1827 1856 0.374758 CACGTTCCATGCTCATTCCG 59.625 55.000 0.00 0.00 0.00 4.30
1828 1857 0.744414 ACGTTCCATGCTCATTCCGG 60.744 55.000 0.00 0.00 0.00 5.14
1829 1858 0.744414 CGTTCCATGCTCATTCCGGT 60.744 55.000 0.00 0.00 0.00 5.28
1830 1859 0.734889 GTTCCATGCTCATTCCGGTG 59.265 55.000 0.00 0.00 0.00 4.94
1831 1860 0.327924 TTCCATGCTCATTCCGGTGT 59.672 50.000 0.00 0.00 0.00 4.16
1832 1861 0.327924 TCCATGCTCATTCCGGTGTT 59.672 50.000 0.00 0.00 0.00 3.32
1833 1862 0.734889 CCATGCTCATTCCGGTGTTC 59.265 55.000 0.00 0.00 0.00 3.18
1834 1863 1.679944 CCATGCTCATTCCGGTGTTCT 60.680 52.381 0.00 0.00 0.00 3.01
1835 1864 2.086869 CATGCTCATTCCGGTGTTCTT 58.913 47.619 0.00 0.00 0.00 2.52
1836 1865 2.270352 TGCTCATTCCGGTGTTCTTT 57.730 45.000 0.00 0.00 0.00 2.52
1837 1866 1.879380 TGCTCATTCCGGTGTTCTTTG 59.121 47.619 0.00 0.00 0.00 2.77
1838 1867 1.401539 GCTCATTCCGGTGTTCTTTGC 60.402 52.381 0.00 0.00 0.00 3.68
1839 1868 1.879380 CTCATTCCGGTGTTCTTTGCA 59.121 47.619 0.00 0.00 0.00 4.08
1840 1869 2.489329 CTCATTCCGGTGTTCTTTGCAT 59.511 45.455 0.00 0.00 0.00 3.96
1841 1870 2.890311 TCATTCCGGTGTTCTTTGCATT 59.110 40.909 0.00 0.00 0.00 3.56
1842 1871 3.057596 TCATTCCGGTGTTCTTTGCATTC 60.058 43.478 0.00 0.00 0.00 2.67
1843 1872 1.974265 TCCGGTGTTCTTTGCATTCA 58.026 45.000 0.00 0.00 0.00 2.57
1844 1873 2.513753 TCCGGTGTTCTTTGCATTCAT 58.486 42.857 0.00 0.00 0.00 2.57
1845 1874 2.890311 TCCGGTGTTCTTTGCATTCATT 59.110 40.909 0.00 0.00 0.00 2.57
1846 1875 2.988493 CCGGTGTTCTTTGCATTCATTG 59.012 45.455 0.00 0.00 0.00 2.82
1847 1876 3.552684 CCGGTGTTCTTTGCATTCATTGT 60.553 43.478 0.00 0.00 0.00 2.71
1848 1877 4.320861 CCGGTGTTCTTTGCATTCATTGTA 60.321 41.667 0.00 0.00 0.00 2.41
1849 1878 5.401550 CGGTGTTCTTTGCATTCATTGTAT 58.598 37.500 0.00 0.00 0.00 2.29
1850 1879 5.863397 CGGTGTTCTTTGCATTCATTGTATT 59.137 36.000 0.00 0.00 0.00 1.89
1851 1880 6.033831 CGGTGTTCTTTGCATTCATTGTATTC 59.966 38.462 0.00 0.00 0.00 1.75
1852 1881 6.311200 GGTGTTCTTTGCATTCATTGTATTCC 59.689 38.462 0.00 0.00 0.00 3.01
1853 1882 6.867816 GTGTTCTTTGCATTCATTGTATTCCA 59.132 34.615 0.00 0.00 0.00 3.53
1854 1883 7.062605 GTGTTCTTTGCATTCATTGTATTCCAG 59.937 37.037 0.00 0.00 0.00 3.86
1855 1884 5.653507 TCTTTGCATTCATTGTATTCCAGC 58.346 37.500 0.00 0.00 0.00 4.85
1856 1885 3.696281 TGCATTCATTGTATTCCAGCG 57.304 42.857 0.00 0.00 0.00 5.18
1857 1886 2.223548 TGCATTCATTGTATTCCAGCGC 60.224 45.455 0.00 0.00 0.00 5.92
1858 1887 2.223548 GCATTCATTGTATTCCAGCGCA 60.224 45.455 11.47 0.00 0.00 6.09
1859 1888 3.551454 GCATTCATTGTATTCCAGCGCAT 60.551 43.478 11.47 0.00 0.00 4.73
1860 1889 3.696281 TTCATTGTATTCCAGCGCATG 57.304 42.857 11.47 4.88 0.00 4.06
1861 1890 2.916640 TCATTGTATTCCAGCGCATGA 58.083 42.857 11.47 3.36 0.00 3.07
1862 1891 2.874086 TCATTGTATTCCAGCGCATGAG 59.126 45.455 11.47 0.00 0.00 2.90
1863 1892 2.401583 TTGTATTCCAGCGCATGAGT 57.598 45.000 11.47 4.68 0.00 3.41
1864 1893 3.535280 TTGTATTCCAGCGCATGAGTA 57.465 42.857 11.47 3.58 0.00 2.59
1865 1894 3.751479 TGTATTCCAGCGCATGAGTAT 57.249 42.857 11.47 0.00 0.00 2.12
1866 1895 4.071961 TGTATTCCAGCGCATGAGTATT 57.928 40.909 11.47 0.00 0.00 1.89
1867 1896 4.450976 TGTATTCCAGCGCATGAGTATTT 58.549 39.130 11.47 0.00 0.00 1.40
1868 1897 3.976793 ATTCCAGCGCATGAGTATTTG 57.023 42.857 11.47 0.00 0.00 2.32
1869 1898 1.016627 TCCAGCGCATGAGTATTTGC 58.983 50.000 11.47 0.00 35.50 3.68
1870 1899 1.019673 CCAGCGCATGAGTATTTGCT 58.980 50.000 11.47 0.00 36.71 3.91
1871 1900 1.402968 CCAGCGCATGAGTATTTGCTT 59.597 47.619 11.47 0.00 36.71 3.91
1872 1901 2.540361 CCAGCGCATGAGTATTTGCTTC 60.540 50.000 11.47 0.00 36.71 3.86
1873 1902 1.672881 AGCGCATGAGTATTTGCTTCC 59.327 47.619 11.47 0.00 36.71 3.46
1874 1903 1.672881 GCGCATGAGTATTTGCTTCCT 59.327 47.619 0.30 0.00 36.71 3.36
1875 1904 2.872245 GCGCATGAGTATTTGCTTCCTA 59.128 45.455 0.30 0.00 36.71 2.94
1876 1905 3.312421 GCGCATGAGTATTTGCTTCCTAA 59.688 43.478 0.30 0.00 36.71 2.69
1877 1906 4.786609 GCGCATGAGTATTTGCTTCCTAAC 60.787 45.833 0.30 0.00 36.71 2.34
1878 1907 4.260784 CGCATGAGTATTTGCTTCCTAACC 60.261 45.833 0.00 0.00 36.71 2.85
1879 1908 4.884164 GCATGAGTATTTGCTTCCTAACCT 59.116 41.667 0.00 0.00 35.95 3.50
1880 1909 5.358160 GCATGAGTATTTGCTTCCTAACCTT 59.642 40.000 0.00 0.00 35.95 3.50
1881 1910 6.678900 GCATGAGTATTTGCTTCCTAACCTTG 60.679 42.308 0.00 0.00 35.95 3.61
1882 1911 5.876357 TGAGTATTTGCTTCCTAACCTTGT 58.124 37.500 0.00 0.00 0.00 3.16
1883 1912 6.303839 TGAGTATTTGCTTCCTAACCTTGTT 58.696 36.000 0.00 0.00 0.00 2.83
1884 1913 6.430000 TGAGTATTTGCTTCCTAACCTTGTTC 59.570 38.462 0.00 0.00 0.00 3.18
1885 1914 6.543735 AGTATTTGCTTCCTAACCTTGTTCT 58.456 36.000 0.00 0.00 0.00 3.01
1886 1915 5.712152 ATTTGCTTCCTAACCTTGTTCTG 57.288 39.130 0.00 0.00 0.00 3.02
1887 1916 2.504367 TGCTTCCTAACCTTGTTCTGC 58.496 47.619 0.00 0.00 0.00 4.26
1888 1917 1.813178 GCTTCCTAACCTTGTTCTGCC 59.187 52.381 0.00 0.00 0.00 4.85
1889 1918 2.553247 GCTTCCTAACCTTGTTCTGCCT 60.553 50.000 0.00 0.00 0.00 4.75
1890 1919 3.756117 CTTCCTAACCTTGTTCTGCCTT 58.244 45.455 0.00 0.00 0.00 4.35
1891 1920 3.876309 TCCTAACCTTGTTCTGCCTTT 57.124 42.857 0.00 0.00 0.00 3.11
1892 1921 4.178956 TCCTAACCTTGTTCTGCCTTTT 57.821 40.909 0.00 0.00 0.00 2.27
1893 1922 3.888930 TCCTAACCTTGTTCTGCCTTTTG 59.111 43.478 0.00 0.00 0.00 2.44
1894 1923 2.602257 AACCTTGTTCTGCCTTTTGC 57.398 45.000 0.00 0.00 41.77 3.68
1907 1936 2.414138 GCCTTTTGCATTCATTGTCTGC 59.586 45.455 0.00 6.35 40.77 4.26
1908 1937 2.997986 CCTTTTGCATTCATTGTCTGCC 59.002 45.455 9.57 0.00 35.02 4.85
1909 1938 3.306502 CCTTTTGCATTCATTGTCTGCCT 60.307 43.478 9.57 0.00 35.02 4.75
1910 1939 4.312443 CTTTTGCATTCATTGTCTGCCTT 58.688 39.130 9.57 0.00 35.02 4.35
1911 1940 4.339872 TTTGCATTCATTGTCTGCCTTT 57.660 36.364 9.57 0.00 35.02 3.11
1912 1941 3.306917 TGCATTCATTGTCTGCCTTTG 57.693 42.857 9.57 0.00 35.02 2.77
1922 2964 4.471904 TGTCTGCCTTTGTACCAGATAG 57.528 45.455 2.67 0.00 37.85 2.08
1932 2974 7.652507 GCCTTTGTACCAGATAGTATACAAGTC 59.347 40.741 5.50 0.15 38.42 3.01
1945 2987 4.785346 ATACAAGTCCCATGCTCATTCT 57.215 40.909 0.00 0.00 0.00 2.40
1946 2988 5.894298 ATACAAGTCCCATGCTCATTCTA 57.106 39.130 0.00 0.00 0.00 2.10
1963 3005 8.133627 GCTCATTCTATGCATTTACAGTGAATT 58.866 33.333 3.54 0.00 0.00 2.17
1967 3009 7.320443 TCTATGCATTTACAGTGAATTGACC 57.680 36.000 3.54 0.00 0.00 4.02
1997 3067 8.866970 AACCACTTAATACTTAATCGGGAAAA 57.133 30.769 0.00 0.00 0.00 2.29
2007 3077 7.027778 ACTTAATCGGGAAAATCTTATGTGC 57.972 36.000 0.00 0.00 0.00 4.57
2008 3078 6.828785 ACTTAATCGGGAAAATCTTATGTGCT 59.171 34.615 0.00 0.00 0.00 4.40
2022 3092 6.459066 TCTTATGTGCTAGCACTTATCCATC 58.541 40.000 39.44 17.46 46.30 3.51
2029 3099 7.720957 TGTGCTAGCACTTATCCATCAATTTAT 59.279 33.333 39.44 0.00 46.30 1.40
2030 3100 8.571336 GTGCTAGCACTTATCCATCAATTTATT 58.429 33.333 35.25 0.00 43.12 1.40
2031 3101 9.135189 TGCTAGCACTTATCCATCAATTTATTT 57.865 29.630 14.93 0.00 0.00 1.40
2063 3133 6.374613 CCTCCTGAAAAGTTAAAGGGTATCAC 59.625 42.308 0.00 0.00 0.00 3.06
2075 3145 1.594833 GTATCACGAGGGTGGCACA 59.405 57.895 20.82 0.00 44.50 4.57
2095 3165 6.406370 GCACACATATATGCAAGGATAGGTA 58.594 40.000 12.79 0.00 41.65 3.08
2097 3167 7.615403 CACACATATATGCAAGGATAGGTACT 58.385 38.462 12.79 0.00 46.37 2.73
2098 3168 7.547019 CACACATATATGCAAGGATAGGTACTG 59.453 40.741 12.79 1.23 41.52 2.74
2099 3169 7.044181 CACATATATGCAAGGATAGGTACTGG 58.956 42.308 12.79 0.00 41.52 4.00
2118 3188 1.907255 GGAAAGTACCAGGGTAGTGCT 59.093 52.381 6.59 0.00 34.78 4.40
2120 3190 1.569653 AAGTACCAGGGTAGTGCTCC 58.430 55.000 6.59 0.00 34.78 4.70
2164 3234 2.290197 GGGGTATTTACGGTGTTCCACA 60.290 50.000 0.00 0.00 35.86 4.17
2173 3243 4.263572 TGTTCCACACAGGGGCGG 62.264 66.667 0.00 0.00 38.24 6.13
2174 3244 3.948719 GTTCCACACAGGGGCGGA 61.949 66.667 0.00 0.00 38.24 5.54
2175 3245 3.636231 TTCCACACAGGGGCGGAG 61.636 66.667 0.00 0.00 38.24 4.63
2188 3258 2.759973 CGGAGCTCTGTAGGGGCA 60.760 66.667 14.84 0.00 0.00 5.36
2189 3259 2.359169 CGGAGCTCTGTAGGGGCAA 61.359 63.158 14.84 0.00 0.00 4.52
2190 3260 1.899437 CGGAGCTCTGTAGGGGCAAA 61.899 60.000 14.84 0.00 0.00 3.68
2191 3261 0.393132 GGAGCTCTGTAGGGGCAAAC 60.393 60.000 14.64 0.00 0.00 2.93
2192 3262 0.393132 GAGCTCTGTAGGGGCAAACC 60.393 60.000 6.43 0.00 39.11 3.27
2217 3287 3.176297 TGGCCCGTCCAGGAATTT 58.824 55.556 0.00 0.00 45.00 1.82
2218 3288 1.304052 TGGCCCGTCCAGGAATTTG 60.304 57.895 0.00 0.00 45.00 2.32
2219 3289 1.001393 GGCCCGTCCAGGAATTTGA 60.001 57.895 0.00 0.00 45.00 2.69
2220 3290 1.313091 GGCCCGTCCAGGAATTTGAC 61.313 60.000 0.00 0.00 45.00 3.18
2221 3291 0.608035 GCCCGTCCAGGAATTTGACA 60.608 55.000 0.00 0.00 45.00 3.58
2222 3292 1.904287 CCCGTCCAGGAATTTGACAA 58.096 50.000 0.00 0.00 45.00 3.18
2223 3293 2.235016 CCCGTCCAGGAATTTGACAAA 58.765 47.619 2.48 2.48 45.00 2.83
2224 3294 2.625790 CCCGTCCAGGAATTTGACAAAA 59.374 45.455 4.41 0.00 45.00 2.44
2225 3295 3.068873 CCCGTCCAGGAATTTGACAAAAA 59.931 43.478 4.41 0.00 45.00 1.94
2248 3318 7.767745 AAAAATTACTACTAGGCGTCTTAGC 57.232 36.000 0.00 0.00 0.00 3.09
2249 3319 6.712179 AAATTACTACTAGGCGTCTTAGCT 57.288 37.500 0.00 0.00 37.29 3.32
2250 3320 7.814264 AAATTACTACTAGGCGTCTTAGCTA 57.186 36.000 0.00 0.00 37.29 3.32
2251 3321 7.437793 AATTACTACTAGGCGTCTTAGCTAG 57.562 40.000 0.00 0.00 37.29 3.42
2252 3322 3.742385 ACTACTAGGCGTCTTAGCTAGG 58.258 50.000 0.00 0.00 37.29 3.02
2253 3323 1.320507 ACTAGGCGTCTTAGCTAGGC 58.679 55.000 0.00 0.00 37.29 3.93
2260 3330 3.256285 CGTCTTAGCTAGGCGTCTTAG 57.744 52.381 0.00 0.00 46.66 2.18
2261 3331 2.602694 CGTCTTAGCTAGGCGTCTTAGC 60.603 54.545 0.00 3.68 46.66 3.09
2269 3339 2.978824 GCGTCTTAGCCCAGTCCA 59.021 61.111 0.00 0.00 0.00 4.02
2270 3340 1.448013 GCGTCTTAGCCCAGTCCAC 60.448 63.158 0.00 0.00 0.00 4.02
2271 3341 1.889530 GCGTCTTAGCCCAGTCCACT 61.890 60.000 0.00 0.00 0.00 4.00
2272 3342 1.471119 CGTCTTAGCCCAGTCCACTA 58.529 55.000 0.00 0.00 0.00 2.74
2273 3343 1.822990 CGTCTTAGCCCAGTCCACTAA 59.177 52.381 0.00 0.00 0.00 2.24
2274 3344 2.159226 CGTCTTAGCCCAGTCCACTAAG 60.159 54.545 0.00 0.00 42.69 2.18
2275 3345 1.831736 TCTTAGCCCAGTCCACTAAGC 59.168 52.381 0.00 0.00 41.63 3.09
2276 3346 0.909623 TTAGCCCAGTCCACTAAGCC 59.090 55.000 0.00 0.00 0.00 4.35
2277 3347 0.981277 TAGCCCAGTCCACTAAGCCC 60.981 60.000 0.00 0.00 0.00 5.19
2278 3348 2.602676 GCCCAGTCCACTAAGCCCA 61.603 63.158 0.00 0.00 0.00 5.36
2279 3349 1.299976 CCCAGTCCACTAAGCCCAC 59.700 63.158 0.00 0.00 0.00 4.61
2280 3350 1.079127 CCAGTCCACTAAGCCCACG 60.079 63.158 0.00 0.00 0.00 4.94
2281 3351 1.741770 CAGTCCACTAAGCCCACGC 60.742 63.158 0.00 0.00 0.00 5.34
2282 3352 2.214216 AGTCCACTAAGCCCACGCA 61.214 57.895 0.00 0.00 37.52 5.24
2283 3353 2.033194 GTCCACTAAGCCCACGCAC 61.033 63.158 0.00 0.00 37.52 5.34
2284 3354 3.118454 CCACTAAGCCCACGCACG 61.118 66.667 0.00 0.00 37.52 5.34
2285 3355 3.788766 CACTAAGCCCACGCACGC 61.789 66.667 0.00 0.00 37.52 5.34
2286 3356 4.308458 ACTAAGCCCACGCACGCA 62.308 61.111 0.00 0.00 37.52 5.24
2287 3357 3.788766 CTAAGCCCACGCACGCAC 61.789 66.667 0.00 0.00 37.52 5.34
2288 3358 4.610714 TAAGCCCACGCACGCACA 62.611 61.111 0.00 0.00 37.52 4.57
2294 3364 2.815211 CACGCACGCACAGGCTAT 60.815 61.111 0.00 0.00 38.10 2.97
2295 3365 2.509336 ACGCACGCACAGGCTATC 60.509 61.111 0.00 0.00 38.10 2.08
2296 3366 3.264897 CGCACGCACAGGCTATCC 61.265 66.667 0.00 0.00 38.10 2.59
2297 3367 2.897350 GCACGCACAGGCTATCCC 60.897 66.667 0.00 0.00 38.10 3.85
2298 3368 2.203070 CACGCACAGGCTATCCCC 60.203 66.667 0.00 0.00 38.10 4.81
2299 3369 2.687200 ACGCACAGGCTATCCCCA 60.687 61.111 0.00 0.00 38.10 4.96
2300 3370 2.072487 ACGCACAGGCTATCCCCAT 61.072 57.895 0.00 0.00 38.10 4.00
2301 3371 1.302033 CGCACAGGCTATCCCCATC 60.302 63.158 0.00 0.00 38.10 3.51
2302 3372 1.302033 GCACAGGCTATCCCCATCG 60.302 63.158 0.00 0.00 36.96 3.84
2303 3373 1.372683 CACAGGCTATCCCCATCGG 59.627 63.158 0.00 0.00 0.00 4.18
2304 3374 2.348998 CAGGCTATCCCCATCGGC 59.651 66.667 0.00 0.00 0.00 5.54
2305 3375 2.930562 AGGCTATCCCCATCGGCC 60.931 66.667 0.00 0.00 42.74 6.13
2306 3376 3.249189 GGCTATCCCCATCGGCCA 61.249 66.667 2.24 0.00 42.08 5.36
2307 3377 2.606587 GGCTATCCCCATCGGCCAT 61.607 63.158 2.24 0.00 42.08 4.40
2308 3378 1.078143 GCTATCCCCATCGGCCATC 60.078 63.158 2.24 0.00 0.00 3.51
2309 3379 1.219124 CTATCCCCATCGGCCATCG 59.781 63.158 2.24 0.00 40.90 3.84
2310 3380 1.535444 TATCCCCATCGGCCATCGT 60.535 57.895 2.24 0.00 40.32 3.73
2311 3381 1.541310 TATCCCCATCGGCCATCGTC 61.541 60.000 2.24 0.00 40.32 4.20
2312 3382 4.969196 CCCCATCGGCCATCGTCG 62.969 72.222 2.24 0.00 40.32 5.12
2315 3385 4.592192 CATCGGCCATCGTCGCCT 62.592 66.667 2.24 0.00 44.73 5.52
2316 3386 4.286320 ATCGGCCATCGTCGCCTC 62.286 66.667 2.24 0.00 44.73 4.70
2319 3389 4.593864 GGCCATCGTCGCCTCCTC 62.594 72.222 0.00 0.00 43.48 3.71
2320 3390 4.593864 GCCATCGTCGCCTCCTCC 62.594 72.222 0.00 0.00 0.00 4.30
2321 3391 2.835431 CCATCGTCGCCTCCTCCT 60.835 66.667 0.00 0.00 0.00 3.69
2322 3392 2.725008 CATCGTCGCCTCCTCCTC 59.275 66.667 0.00 0.00 0.00 3.71
2323 3393 1.826054 CATCGTCGCCTCCTCCTCT 60.826 63.158 0.00 0.00 0.00 3.69
2324 3394 1.527380 ATCGTCGCCTCCTCCTCTC 60.527 63.158 0.00 0.00 0.00 3.20
2325 3395 2.272230 ATCGTCGCCTCCTCCTCTCA 62.272 60.000 0.00 0.00 0.00 3.27
2326 3396 2.766400 CGTCGCCTCCTCCTCTCAC 61.766 68.421 0.00 0.00 0.00 3.51
2327 3397 2.438614 TCGCCTCCTCCTCTCACG 60.439 66.667 0.00 0.00 0.00 4.35
2328 3398 4.200283 CGCCTCCTCCTCTCACGC 62.200 72.222 0.00 0.00 0.00 5.34
2329 3399 3.071206 GCCTCCTCCTCTCACGCA 61.071 66.667 0.00 0.00 0.00 5.24
2330 3400 2.888863 CCTCCTCCTCTCACGCAC 59.111 66.667 0.00 0.00 0.00 5.34
2331 3401 2.487428 CTCCTCCTCTCACGCACG 59.513 66.667 0.00 0.00 0.00 5.34
2332 3402 3.691744 CTCCTCCTCTCACGCACGC 62.692 68.421 0.00 0.00 0.00 5.34
2333 3403 3.753434 CCTCCTCTCACGCACGCT 61.753 66.667 0.00 0.00 0.00 5.07
2334 3404 2.505777 CTCCTCTCACGCACGCTG 60.506 66.667 0.00 0.00 0.00 5.18
2335 3405 4.724602 TCCTCTCACGCACGCTGC 62.725 66.667 0.00 0.00 40.69 5.25
2337 3407 3.771491 CTCTCACGCACGCTGCAC 61.771 66.667 0.00 0.00 45.36 4.57
2349 3419 2.745100 CTGCACGCAGAGGCACAT 60.745 61.111 13.87 0.00 46.30 3.21
2350 3420 3.035576 CTGCACGCAGAGGCACATG 62.036 63.158 13.87 0.00 46.30 3.21
2351 3421 4.471726 GCACGCAGAGGCACATGC 62.472 66.667 0.00 0.00 41.24 4.06
2352 3422 2.745100 CACGCAGAGGCACATGCT 60.745 61.111 3.48 0.00 40.34 3.79
2353 3423 2.033141 ACGCAGAGGCACATGCTT 59.967 55.556 3.48 0.00 40.34 3.91
2354 3424 2.037136 ACGCAGAGGCACATGCTTC 61.037 57.895 7.86 7.86 46.07 3.86
2355 3425 2.758089 CGCAGAGGCACATGCTTCC 61.758 63.158 11.94 0.00 46.80 3.46
2356 3426 2.413142 GCAGAGGCACATGCTTCCC 61.413 63.158 11.94 1.12 46.80 3.97
2357 3427 1.751927 CAGAGGCACATGCTTCCCC 60.752 63.158 11.94 0.00 46.80 4.81
2358 3428 2.233566 AGAGGCACATGCTTCCCCA 61.234 57.895 11.94 0.00 46.80 4.96
2359 3429 1.304381 GAGGCACATGCTTCCCCAA 60.304 57.895 4.71 0.00 40.74 4.12
2360 3430 0.685458 GAGGCACATGCTTCCCCAAT 60.685 55.000 4.71 0.00 40.74 3.16
2361 3431 0.252375 AGGCACATGCTTCCCCAATT 60.252 50.000 3.48 0.00 41.70 2.32
2362 3432 0.176449 GGCACATGCTTCCCCAATTC 59.824 55.000 3.48 0.00 41.70 2.17
2363 3433 0.176449 GCACATGCTTCCCCAATTCC 59.824 55.000 0.00 0.00 38.21 3.01
2364 3434 0.826062 CACATGCTTCCCCAATTCCC 59.174 55.000 0.00 0.00 0.00 3.97
2384 3454 1.675483 CCATCCTCAGTCTCAGACTCG 59.325 57.143 3.60 0.99 41.37 4.18
2429 3502 0.883370 GTGGACAAGGAACACGGTCC 60.883 60.000 0.00 0.00 44.05 4.46
2432 3505 0.883370 GACAAGGAACACGGTCCACC 60.883 60.000 3.49 0.00 40.48 4.61
2492 3565 3.825833 GACGCCCGCTGGTATCTCG 62.826 68.421 0.00 0.00 0.00 4.04
2553 3626 2.053618 GGGATCCACTCCGATCTGG 58.946 63.158 15.23 0.00 46.01 3.86
2554 3627 0.760945 GGGATCCACTCCGATCTGGT 60.761 60.000 15.23 0.00 46.01 4.00
2555 3628 0.390860 GGATCCACTCCGATCTGGTG 59.609 60.000 6.95 2.25 38.97 4.17
2558 3631 2.659063 CCACTCCGATCTGGTGCCA 61.659 63.158 3.97 0.00 39.52 4.92
2585 3658 2.733956 TGTCAATTGGGGCACTTATCC 58.266 47.619 5.42 0.00 0.00 2.59
2596 3669 2.351738 GGCACTTATCCAGCAACAACAC 60.352 50.000 0.00 0.00 0.00 3.32
2605 3678 0.588252 AGCAACAACACGCAGATCAC 59.412 50.000 0.00 0.00 0.00 3.06
2606 3679 0.588252 GCAACAACACGCAGATCACT 59.412 50.000 0.00 0.00 0.00 3.41
2612 3685 2.080286 ACACGCAGATCACTTACACC 57.920 50.000 0.00 0.00 0.00 4.16
2626 3699 1.394618 TACACCAGCAACAAACCACC 58.605 50.000 0.00 0.00 0.00 4.61
2633 3706 0.248866 GCAACAAACCACCCAAGACG 60.249 55.000 0.00 0.00 0.00 4.18
2634 3707 0.248866 CAACAAACCACCCAAGACGC 60.249 55.000 0.00 0.00 0.00 5.19
2635 3708 1.720694 AACAAACCACCCAAGACGCG 61.721 55.000 3.53 3.53 0.00 6.01
2642 3715 1.525077 ACCCAAGACGCGCAAAGAA 60.525 52.632 5.73 0.00 0.00 2.52
2647 3720 2.450160 CAAGACGCGCAAAGAAAAACT 58.550 42.857 5.73 0.00 0.00 2.66
2655 3728 4.260656 CGCGCAAAGAAAAACTAGCTTATG 59.739 41.667 8.75 0.00 0.00 1.90
2688 3761 4.037208 ACTTCATCACAAACCAAGCAGAAG 59.963 41.667 0.00 0.00 36.82 2.85
2798 3873 5.220567 CGTTAGTCTCTCTTCCCTTACGTAC 60.221 48.000 0.00 0.00 0.00 3.67
2911 3988 7.338710 ACCTAATGTAGAACACTTATGCATGT 58.661 34.615 10.16 0.00 0.00 3.21
2919 3996 6.003950 AGAACACTTATGCATGTACCAAACT 58.996 36.000 10.16 0.00 0.00 2.66
2920 3997 6.490040 AGAACACTTATGCATGTACCAAACTT 59.510 34.615 10.16 0.00 0.00 2.66
2959 4036 8.634335 TTACAATGAATCAAGTCTTGGAATGA 57.366 30.769 12.66 0.00 0.00 2.57
3001 4083 2.851195 AGCTTATTAATCCCTGTGGCG 58.149 47.619 0.00 0.00 0.00 5.69
3010 4092 2.901840 CCTGTGGCGCGGCATTAT 60.902 61.111 38.25 0.00 0.00 1.28
3012 4094 3.812166 CTGTGGCGCGGCATTATGC 62.812 63.158 38.25 24.54 44.08 3.14
3041 4123 9.148104 TCACACACTACACGCTAGTATATATAG 57.852 37.037 0.00 0.00 0.00 1.31
3042 4124 9.148104 CACACACTACACGCTAGTATATATAGA 57.852 37.037 0.00 0.00 0.00 1.98
3068 4150 4.074970 CTGGTAGCTCAAATTTGTGACCT 58.925 43.478 21.28 12.94 0.00 3.85
3070 4152 3.125316 GGTAGCTCAAATTTGTGACCTCG 59.875 47.826 21.28 4.10 0.00 4.63
3072 4154 1.200020 GCTCAAATTTGTGACCTCGGG 59.800 52.381 21.28 0.00 0.00 5.14
3112 4194 3.923782 TTTTTAGTCCGGCCCGCCC 62.924 63.158 0.00 0.00 0.00 6.13
3140 4222 2.032528 TTCAAGCTCCGCCACTGG 59.967 61.111 0.00 0.00 0.00 4.00
3141 4223 2.818169 TTCAAGCTCCGCCACTGGT 61.818 57.895 0.00 0.00 0.00 4.00
3142 4224 2.281761 CAAGCTCCGCCACTGGTT 60.282 61.111 0.00 0.00 0.00 3.67
3143 4225 2.032681 AAGCTCCGCCACTGGTTC 59.967 61.111 0.00 0.00 0.00 3.62
3144 4226 3.553095 AAGCTCCGCCACTGGTTCC 62.553 63.158 0.00 0.00 0.00 3.62
3145 4227 4.329545 GCTCCGCCACTGGTTCCA 62.330 66.667 0.00 0.00 0.00 3.53
3146 4228 2.358737 CTCCGCCACTGGTTCCAC 60.359 66.667 0.00 0.00 0.00 4.02
3147 4229 3.164977 TCCGCCACTGGTTCCACA 61.165 61.111 0.00 0.00 0.00 4.17
3148 4230 2.034066 CCGCCACTGGTTCCACAT 59.966 61.111 0.00 0.00 0.00 3.21
3149 4231 1.195442 TCCGCCACTGGTTCCACATA 61.195 55.000 0.00 0.00 0.00 2.29
3150 4232 1.024579 CCGCCACTGGTTCCACATAC 61.025 60.000 0.00 0.00 0.00 2.39
3151 4233 0.036388 CGCCACTGGTTCCACATACT 60.036 55.000 0.00 0.00 0.00 2.12
3152 4234 1.610624 CGCCACTGGTTCCACATACTT 60.611 52.381 0.00 0.00 0.00 2.24
3153 4235 2.084546 GCCACTGGTTCCACATACTTC 58.915 52.381 0.00 0.00 0.00 3.01
3154 4236 2.290323 GCCACTGGTTCCACATACTTCT 60.290 50.000 0.00 0.00 0.00 2.85
3155 4237 3.055385 GCCACTGGTTCCACATACTTCTA 60.055 47.826 0.00 0.00 0.00 2.10
3156 4238 4.564821 GCCACTGGTTCCACATACTTCTAA 60.565 45.833 0.00 0.00 0.00 2.10
3157 4239 5.745227 CCACTGGTTCCACATACTTCTAAT 58.255 41.667 0.00 0.00 0.00 1.73
3158 4240 6.180472 CCACTGGTTCCACATACTTCTAATT 58.820 40.000 0.00 0.00 0.00 1.40
3159 4241 7.335627 CCACTGGTTCCACATACTTCTAATTA 58.664 38.462 0.00 0.00 0.00 1.40
3160 4242 7.495934 CCACTGGTTCCACATACTTCTAATTAG 59.504 40.741 6.11 6.11 0.00 1.73
3161 4243 8.258007 CACTGGTTCCACATACTTCTAATTAGA 58.742 37.037 11.24 11.24 0.00 2.10
3162 4244 8.258708 ACTGGTTCCACATACTTCTAATTAGAC 58.741 37.037 14.85 0.00 30.81 2.59
3163 4245 8.375493 TGGTTCCACATACTTCTAATTAGACT 57.625 34.615 14.85 5.96 30.81 3.24
3343 4425 6.998074 CCAAGTACATATTTAAGATGGAGCCA 59.002 38.462 4.57 0.00 0.00 4.75
3365 4447 5.504665 CCACTCAGTGTCAGTCAATCAAAAC 60.505 44.000 3.56 0.00 0.00 2.43
3958 5052 4.344865 TCCCTCCAGTTTGGCGGC 62.345 66.667 0.00 0.00 41.04 6.53
4102 5205 5.008019 CCTTCATATTTGGAGTGATCAACCG 59.992 44.000 13.27 1.71 0.00 4.44
4561 5691 4.640364 TGACTGTTCTCACATTGCATGTA 58.360 39.130 0.00 0.00 42.70 2.29
4598 5728 5.221843 ACAGAACTAATTGGCTTCACACCTA 60.222 40.000 0.00 0.00 0.00 3.08
4970 6292 4.081142 ACCCATCGACATCAAGTGAACATA 60.081 41.667 0.00 0.00 0.00 2.29
5048 6370 8.486210 ACAATTCTCAGTTGATTAGCAGGTATA 58.514 33.333 0.00 0.00 0.00 1.47
5049 6371 9.499479 CAATTCTCAGTTGATTAGCAGGTATAT 57.501 33.333 0.00 0.00 0.00 0.86
5221 6544 9.043079 CATCTCTGCTGTATGGCATAATAATAG 57.957 37.037 9.14 4.97 41.63 1.73
5262 6585 7.013942 ACTCAACTTCCACCTTTTATTGTTACC 59.986 37.037 0.00 0.00 0.00 2.85
5264 6587 5.379187 ACTTCCACCTTTTATTGTTACCGT 58.621 37.500 0.00 0.00 0.00 4.83
5313 6661 6.577103 TGACAGGTGCAATTAAAAATGTCAA 58.423 32.000 10.71 0.00 41.86 3.18
5410 6758 1.271597 ACCAGGAGAAGTGATGGCAAC 60.272 52.381 0.00 0.00 36.21 4.17
5691 7040 4.907010 CGAGAAGTACAACGATGCTATCTC 59.093 45.833 0.00 0.00 0.00 2.75
5904 7253 3.244596 GGGAAGCCCTTGTCCTATACATC 60.245 52.174 0.00 0.00 41.34 3.06
6218 7567 9.927668 CCAATTTCAAATAGTCCAACATAAAGT 57.072 29.630 0.00 0.00 0.00 2.66
6263 7612 7.168972 GTGTTTGAGCATTAATTAAGTTGTGCA 59.831 33.333 18.79 7.53 36.08 4.57
6434 7793 5.107182 GGACTTTGCTCTTAGTTTCGGTTAC 60.107 44.000 0.00 0.00 0.00 2.50
6437 7796 4.595762 TGCTCTTAGTTTCGGTTACACT 57.404 40.909 0.00 0.00 0.00 3.55
6522 7881 1.733526 GGCAAAAGTGGCGAGTGTT 59.266 52.632 0.00 0.00 40.97 3.32
6790 8149 7.058580 GGCGTTTTTGTTTTGTTTTGTTTAGAC 59.941 33.333 0.00 0.00 0.00 2.59
6902 8261 5.422214 TGGAAGAACATTAGGACTCCTTC 57.578 43.478 1.94 0.00 34.61 3.46
6996 8355 7.045693 TCCAACATATATCTCCTAGCCTAGT 57.954 40.000 0.00 0.00 0.00 2.57
7113 8472 2.887454 TCTCATCCCTACCCAATCCA 57.113 50.000 0.00 0.00 0.00 3.41
7203 8562 2.879026 GCCTTCAAAGTCCTTTCGAAGT 59.121 45.455 19.15 0.00 36.77 3.01
7282 8641 7.393327 ACGGTAATGTTAAAAATATGACGTCG 58.607 34.615 11.62 0.00 0.00 5.12
7290 8649 9.119329 TGTTAAAAATATGACGTCGGATTTTTG 57.881 29.630 34.91 0.00 40.14 2.44
7330 8689 9.991388 CAAGGTTTTTCATGGCAATTATATTTG 57.009 29.630 0.00 3.47 0.00 2.32
7640 10289 1.326852 CTCAATGTGCAGATCGTCAGC 59.673 52.381 0.00 0.00 0.00 4.26
7642 10291 1.669265 CAATGTGCAGATCGTCAGCAT 59.331 47.619 0.00 4.79 40.92 3.79
7643 10292 1.296727 ATGTGCAGATCGTCAGCATG 58.703 50.000 7.95 0.00 40.92 4.06
7644 10293 0.741927 TGTGCAGATCGTCAGCATGG 60.742 55.000 7.95 0.00 40.92 3.66
7645 10294 1.153309 TGCAGATCGTCAGCATGGG 60.153 57.895 0.00 0.00 33.88 4.00
7646 10295 1.890979 GCAGATCGTCAGCATGGGG 60.891 63.158 0.00 0.00 36.16 4.96
7647 10296 1.524002 CAGATCGTCAGCATGGGGT 59.476 57.895 0.00 0.00 36.16 4.95
7648 10297 0.531532 CAGATCGTCAGCATGGGGTC 60.532 60.000 0.00 0.00 36.16 4.46
7649 10298 1.592669 GATCGTCAGCATGGGGTCG 60.593 63.158 0.00 0.00 36.16 4.79
7650 10299 3.740128 ATCGTCAGCATGGGGTCGC 62.740 63.158 0.00 0.00 36.16 5.19
7651 10300 4.758251 CGTCAGCATGGGGTCGCA 62.758 66.667 0.00 0.00 36.16 5.10
7652 10301 2.124570 GTCAGCATGGGGTCGCAT 60.125 61.111 0.00 0.00 36.16 4.73
7653 10302 1.146041 GTCAGCATGGGGTCGCATA 59.854 57.895 0.00 0.00 36.16 3.14
7654 10303 0.250467 GTCAGCATGGGGTCGCATAT 60.250 55.000 0.00 0.00 36.16 1.78
7655 10304 0.035317 TCAGCATGGGGTCGCATATC 59.965 55.000 0.00 0.00 36.16 1.63
7656 10305 0.035881 CAGCATGGGGTCGCATATCT 59.964 55.000 0.00 0.00 0.00 1.98
7657 10306 0.767375 AGCATGGGGTCGCATATCTT 59.233 50.000 0.00 0.00 0.00 2.40
7658 10307 1.160137 GCATGGGGTCGCATATCTTC 58.840 55.000 0.00 0.00 0.00 2.87
7659 10308 1.271054 GCATGGGGTCGCATATCTTCT 60.271 52.381 0.00 0.00 0.00 2.85
7660 10309 2.693069 CATGGGGTCGCATATCTTCTC 58.307 52.381 0.21 0.00 0.00 2.87
7661 10310 1.788229 TGGGGTCGCATATCTTCTCA 58.212 50.000 0.00 0.00 0.00 3.27
7662 10311 2.115427 TGGGGTCGCATATCTTCTCAA 58.885 47.619 0.00 0.00 0.00 3.02
7663 10312 2.705658 TGGGGTCGCATATCTTCTCAAT 59.294 45.455 0.00 0.00 0.00 2.57
7664 10313 3.070018 GGGGTCGCATATCTTCTCAATG 58.930 50.000 0.00 0.00 0.00 2.82
7665 10314 3.070018 GGGTCGCATATCTTCTCAATGG 58.930 50.000 0.00 0.00 0.00 3.16
7666 10315 3.070018 GGTCGCATATCTTCTCAATGGG 58.930 50.000 0.00 0.00 35.53 4.00
7667 10316 2.481952 GTCGCATATCTTCTCAATGGGC 59.518 50.000 0.00 0.00 34.55 5.36
7668 10317 1.462283 CGCATATCTTCTCAATGGGCG 59.538 52.381 0.00 0.00 35.87 6.13
7669 10318 2.771089 GCATATCTTCTCAATGGGCGA 58.229 47.619 0.00 0.00 0.00 5.54
7680 10329 2.572333 AATGGGCGAGGGGTTGATGG 62.572 60.000 0.00 0.00 0.00 3.51
7752 10401 3.330701 ACAGAAGCCTGAATCTAACCCAA 59.669 43.478 0.00 0.00 43.02 4.12
7776 10425 1.812922 CTGCCGCACAGTCTCATCC 60.813 63.158 0.00 0.00 41.86 3.51
7823 10472 2.277591 CCCCTACCGTCAACACCGA 61.278 63.158 0.00 0.00 0.00 4.69
7875 10524 4.259356 CAACTCATGTGTCATCCAGTGAT 58.741 43.478 0.03 0.00 39.48 3.06
7951 10600 1.536662 AGCCGGACCTCTCAAACCT 60.537 57.895 5.05 0.00 0.00 3.50
7960 10609 3.118531 ACCTCTCAAACCTGCCTCATAT 58.881 45.455 0.00 0.00 0.00 1.78
7964 10613 3.776969 TCTCAAACCTGCCTCATATGTCT 59.223 43.478 1.90 0.00 0.00 3.41
8015 10664 0.392998 CAGACGGTCCCCTCAAATGG 60.393 60.000 4.14 0.00 0.00 3.16
8016 10665 1.749258 GACGGTCCCCTCAAATGGC 60.749 63.158 0.00 0.00 0.00 4.40
8017 10666 2.440247 CGGTCCCCTCAAATGGCC 60.440 66.667 0.00 0.00 0.00 5.36
8018 10667 2.042944 GGTCCCCTCAAATGGCCC 60.043 66.667 0.00 0.00 0.00 5.80
8019 10668 2.626467 GGTCCCCTCAAATGGCCCT 61.626 63.158 0.00 0.00 0.00 5.19
8020 10669 1.076705 GTCCCCTCAAATGGCCCTC 60.077 63.158 0.00 0.00 0.00 4.30
8021 10670 1.543642 TCCCCTCAAATGGCCCTCA 60.544 57.895 0.00 0.00 0.00 3.86
8022 10671 1.076485 CCCCTCAAATGGCCCTCAG 60.076 63.158 0.00 0.00 0.00 3.35
8023 10672 1.574526 CCCCTCAAATGGCCCTCAGA 61.575 60.000 0.00 0.00 0.00 3.27
8024 10673 0.394899 CCCTCAAATGGCCCTCAGAC 60.395 60.000 0.00 0.00 0.00 3.51
8025 10674 0.622665 CCTCAAATGGCCCTCAGACT 59.377 55.000 0.00 0.00 0.00 3.24
8043 10692 1.515521 CTCCCGGGTTGACAGCAAAC 61.516 60.000 22.86 0.00 41.05 2.93
8044 10693 2.637025 CCGGGTTGACAGCAAACG 59.363 61.111 0.00 0.00 42.73 3.60
8045 10694 2.051345 CGGGTTGACAGCAAACGC 60.051 61.111 0.00 0.00 42.73 4.84
8046 10695 2.335011 GGGTTGACAGCAAACGCC 59.665 61.111 0.00 0.00 42.73 5.68
8047 10696 2.335011 GGTTGACAGCAAACGCCC 59.665 61.111 0.00 0.00 35.42 6.13
8048 10697 2.051345 GTTGACAGCAAACGCCCG 60.051 61.111 0.00 0.00 35.42 6.13
8049 10698 3.283684 TTGACAGCAAACGCCCGG 61.284 61.111 0.00 0.00 0.00 5.73
8052 10701 4.887190 ACAGCAAACGCCCGGGTT 62.887 61.111 24.63 6.41 0.00 4.11
8053 10702 4.341502 CAGCAAACGCCCGGGTTG 62.342 66.667 24.63 19.76 0.00 3.77
8054 10703 4.572571 AGCAAACGCCCGGGTTGA 62.573 61.111 24.63 0.00 0.00 3.18
8055 10704 4.337060 GCAAACGCCCGGGTTGAC 62.337 66.667 24.63 11.08 0.00 3.18
8056 10705 2.902846 CAAACGCCCGGGTTGACA 60.903 61.111 24.63 0.00 0.00 3.58
8057 10706 2.593436 AAACGCCCGGGTTGACAG 60.593 61.111 24.63 9.37 0.00 3.51
8064 10713 3.953775 CGGGTTGACAGCACCCCT 61.954 66.667 9.39 0.00 44.23 4.79
8065 10714 2.034221 GGGTTGACAGCACCCCTC 59.966 66.667 4.17 0.00 43.14 4.30
8066 10715 2.829384 GGGTTGACAGCACCCCTCA 61.829 63.158 4.17 0.00 43.14 3.86
8067 10716 1.380302 GGTTGACAGCACCCCTCAT 59.620 57.895 0.00 0.00 0.00 2.90
8068 10717 0.962356 GGTTGACAGCACCCCTCATG 60.962 60.000 0.00 0.00 0.00 3.07
8069 10718 0.250901 GTTGACAGCACCCCTCATGT 60.251 55.000 0.00 0.00 0.00 3.21
8070 10719 0.036732 TTGACAGCACCCCTCATGTC 59.963 55.000 0.00 0.00 41.89 3.06
8071 10720 1.078143 GACAGCACCCCTCATGTCC 60.078 63.158 0.00 0.00 36.83 4.02
8072 10721 1.841302 GACAGCACCCCTCATGTCCA 61.841 60.000 0.00 0.00 36.83 4.02
8073 10722 1.379916 CAGCACCCCTCATGTCCAA 59.620 57.895 0.00 0.00 0.00 3.53
8074 10723 0.962356 CAGCACCCCTCATGTCCAAC 60.962 60.000 0.00 0.00 0.00 3.77
8075 10724 1.678970 GCACCCCTCATGTCCAACC 60.679 63.158 0.00 0.00 0.00 3.77
8076 10725 1.000896 CACCCCTCATGTCCAACCC 60.001 63.158 0.00 0.00 0.00 4.11
8077 10726 1.465188 ACCCCTCATGTCCAACCCA 60.465 57.895 0.00 0.00 0.00 4.51
8078 10727 1.071314 ACCCCTCATGTCCAACCCAA 61.071 55.000 0.00 0.00 0.00 4.12
8079 10728 0.114168 CCCCTCATGTCCAACCCAAA 59.886 55.000 0.00 0.00 0.00 3.28
8088 10737 1.065600 CCAACCCAAATATGGCGCG 59.934 57.895 0.00 0.00 46.09 6.86
8097 10746 0.107214 AATATGGCGCGGATATGGGG 60.107 55.000 8.83 0.00 0.00 4.96
8178 10827 1.403814 ATTCCTCTTCATCCGCTCGA 58.596 50.000 0.00 0.00 0.00 4.04
8208 10857 1.630878 CCCTAGCCACTTCACTTCCTT 59.369 52.381 0.00 0.00 0.00 3.36
8233 10884 2.182030 CCAAGCTCGTCGAGTCCC 59.818 66.667 22.61 7.15 31.39 4.46
8240 10891 3.432588 CGTCGAGTCCCGTGAGCT 61.433 66.667 0.00 0.00 39.75 4.09
8259 10910 4.101448 GCTCGTGTCCCATGCCCT 62.101 66.667 0.00 0.00 0.00 5.19
8260 10911 2.124983 CTCGTGTCCCATGCCCTG 60.125 66.667 0.00 0.00 0.00 4.45
8271 10923 0.254178 CATGCCCTGCTCTACCTTGT 59.746 55.000 0.00 0.00 0.00 3.16
8304 10956 2.621338 CAACATTCTAAGGAGCGCAGA 58.379 47.619 11.47 0.00 0.00 4.26
8325 10977 4.415150 CCGCTGGACATGGCCACT 62.415 66.667 19.12 0.00 33.52 4.00
8334 10986 2.104859 CATGGCCACTGCAGAGACG 61.105 63.158 23.35 5.47 40.13 4.18
8365 11017 2.278857 CGGAATCGGGTGAGCTCG 60.279 66.667 9.64 0.00 40.60 5.03
8499 11165 4.016706 AGGCGTTTGAGGGGTCGG 62.017 66.667 0.00 0.00 0.00 4.79
8520 11186 2.163818 TTTGCCAAGTCCGACTGTAG 57.836 50.000 0.65 0.00 0.00 2.74
8560 11226 3.057736 CACCAGAGCACAATTTGGAAGAG 60.058 47.826 0.78 0.00 34.76 2.85
8563 11229 3.567164 CAGAGCACAATTTGGAAGAGTGT 59.433 43.478 0.78 0.00 32.99 3.55
8584 11250 0.040425 CAACCAACAAGCGGTGCTAC 60.040 55.000 0.00 0.00 38.25 3.58
8587 11253 0.889186 CCAACAAGCGGTGCTACCTT 60.889 55.000 0.00 0.00 38.25 3.50
8666 11332 6.840075 TGCTTGGCATTTAAATTTTATGCAC 58.160 32.000 26.11 19.46 44.91 4.57
8667 11333 6.429078 TGCTTGGCATTTAAATTTTATGCACA 59.571 30.769 26.11 20.91 44.91 4.57
8668 11334 7.040892 TGCTTGGCATTTAAATTTTATGCACAA 60.041 29.630 26.11 24.02 44.91 3.33
8669 11335 7.806960 GCTTGGCATTTAAATTTTATGCACAAA 59.193 29.630 26.11 19.21 44.91 2.83
8670 11336 9.674824 CTTGGCATTTAAATTTTATGCACAAAA 57.325 25.926 26.11 5.18 44.91 2.44
8739 11405 6.611613 TTCTTCTCACTCATCACAGGTAAT 57.388 37.500 0.00 0.00 0.00 1.89
8806 11472 2.158957 CGCTTAGCTAATTGGGGTGAGA 60.159 50.000 6.64 0.00 0.00 3.27
8834 11500 0.463620 GAGGAGAGAGATGGTGGCAC 59.536 60.000 9.70 9.70 0.00 5.01
8851 11517 0.954452 CACTTTCCAGTGTTGCTCCC 59.046 55.000 0.00 0.00 44.96 4.30
8852 11518 0.550914 ACTTTCCAGTGTTGCTCCCA 59.449 50.000 0.00 0.00 0.00 4.37
8853 11519 0.954452 CTTTCCAGTGTTGCTCCCAC 59.046 55.000 0.00 0.00 0.00 4.61
8854 11520 0.550914 TTTCCAGTGTTGCTCCCACT 59.449 50.000 0.00 0.00 43.76 4.00
8857 11523 4.885426 AGTGTTGCTCCCACTGTG 57.115 55.556 0.00 0.00 41.47 3.66
8858 11524 1.915228 AGTGTTGCTCCCACTGTGT 59.085 52.632 7.08 0.00 41.47 3.72
8859 11525 0.255890 AGTGTTGCTCCCACTGTGTT 59.744 50.000 7.08 0.00 41.47 3.32
8860 11526 1.102978 GTGTTGCTCCCACTGTGTTT 58.897 50.000 7.08 0.00 0.00 2.83
8861 11527 1.476488 GTGTTGCTCCCACTGTGTTTT 59.524 47.619 7.08 0.00 0.00 2.43
8862 11528 1.748493 TGTTGCTCCCACTGTGTTTTC 59.252 47.619 7.08 0.00 0.00 2.29
8863 11529 2.024414 GTTGCTCCCACTGTGTTTTCT 58.976 47.619 7.08 0.00 0.00 2.52
8864 11530 2.427095 GTTGCTCCCACTGTGTTTTCTT 59.573 45.455 7.08 0.00 0.00 2.52
8865 11531 3.569194 TGCTCCCACTGTGTTTTCTTA 57.431 42.857 7.08 0.00 0.00 2.10
8866 11532 4.098914 TGCTCCCACTGTGTTTTCTTAT 57.901 40.909 7.08 0.00 0.00 1.73
8867 11533 5.235850 TGCTCCCACTGTGTTTTCTTATA 57.764 39.130 7.08 0.00 0.00 0.98
8868 11534 5.626142 TGCTCCCACTGTGTTTTCTTATAA 58.374 37.500 7.08 0.00 0.00 0.98
8869 11535 6.065374 TGCTCCCACTGTGTTTTCTTATAAA 58.935 36.000 7.08 0.00 0.00 1.40
8870 11536 6.547880 TGCTCCCACTGTGTTTTCTTATAAAA 59.452 34.615 7.08 0.00 0.00 1.52
8871 11537 7.068839 TGCTCCCACTGTGTTTTCTTATAAAAA 59.931 33.333 7.08 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
168 169 2.304761 GTGTTAGGTTGAGTGGATGGGA 59.695 50.000 0.00 0.00 0.00 4.37
180 181 2.949177 TGGATGCTGTGTGTTAGGTT 57.051 45.000 0.00 0.00 0.00 3.50
225 226 2.197324 TGGAAACAGTGGGGGTGC 59.803 61.111 0.00 0.00 35.01 5.01
282 283 5.607939 TGTTACTTACCATGGTGATCGAT 57.392 39.130 28.17 0.00 0.00 3.59
300 301 4.251543 TGCGACAGAATCAGAGTTGTTA 57.748 40.909 0.00 0.00 0.00 2.41
302 303 2.820059 TGCGACAGAATCAGAGTTGT 57.180 45.000 0.00 0.00 0.00 3.32
315 316 6.545508 CAAGTAAGATGATTTTGATGCGACA 58.454 36.000 0.00 0.00 0.00 4.35
319 320 6.636044 GCTAGCAAGTAAGATGATTTTGATGC 59.364 38.462 10.63 0.00 0.00 3.91
352 353 8.852135 AGAACGGACCAAGAAATGTAAAATTAA 58.148 29.630 0.00 0.00 0.00 1.40
354 355 7.284919 AGAACGGACCAAGAAATGTAAAATT 57.715 32.000 0.00 0.00 0.00 1.82
371 372 2.300152 GGCATGAGATCCATAGAACGGA 59.700 50.000 0.00 0.00 36.84 4.69
533 534 4.531912 TCCGACGCTGACGATCGC 62.532 66.667 16.60 8.83 43.93 4.58
534 535 2.648102 GTCCGACGCTGACGATCG 60.648 66.667 14.88 14.88 43.93 3.69
535 536 2.278013 GGTCCGACGCTGACGATC 60.278 66.667 0.00 0.00 43.93 3.69
536 537 4.175489 CGGTCCGACGCTGACGAT 62.175 66.667 4.91 0.00 43.93 3.73
539 540 3.753070 GATCCGGTCCGACGCTGAC 62.753 68.421 14.39 0.00 0.00 3.51
540 541 3.515286 GATCCGGTCCGACGCTGA 61.515 66.667 14.39 0.50 0.00 4.26
541 542 3.758088 CTGATCCGGTCCGACGCTG 62.758 68.421 14.39 1.47 0.00 5.18
542 543 3.518998 CTGATCCGGTCCGACGCT 61.519 66.667 14.39 0.00 0.00 5.07
543 544 4.570663 CCTGATCCGGTCCGACGC 62.571 72.222 14.39 1.34 0.00 5.19
544 545 4.570663 GCCTGATCCGGTCCGACG 62.571 72.222 14.39 0.00 0.00 5.12
545 546 4.222847 GGCCTGATCCGGTCCGAC 62.223 72.222 14.39 4.50 0.00 4.79
553 554 1.270571 GGATTCTTCTCGGCCTGATCC 60.271 57.143 0.00 0.00 0.00 3.36
554 555 1.691434 AGGATTCTTCTCGGCCTGATC 59.309 52.381 0.00 0.00 0.00 2.92
555 556 1.799933 AGGATTCTTCTCGGCCTGAT 58.200 50.000 0.00 0.00 0.00 2.90
556 557 3.306902 AGGATTCTTCTCGGCCTGA 57.693 52.632 0.00 0.00 0.00 3.86
557 558 0.826715 TCAGGATTCTTCTCGGCCTG 59.173 55.000 0.00 0.00 45.77 4.85
558 559 0.827368 GTCAGGATTCTTCTCGGCCT 59.173 55.000 0.00 0.00 0.00 5.19
649 650 6.587990 TCGACAACAAATGAACACAAAAACAT 59.412 30.769 0.00 0.00 0.00 2.71
705 706 9.809096 CATGACAAAGTATACTAGTCTGATGTT 57.191 33.333 26.10 7.20 34.33 2.71
779 780 9.694137 CTAGAAAGACTTATATTTAGGAACGGG 57.306 37.037 0.00 0.00 0.00 5.28
840 841 4.863131 CCGTGGTTTAGAGTGTAGATTCAC 59.137 45.833 0.00 0.00 38.46 3.18
881 882 9.922477 TCTTTCTAGAGATTTCACTATGGACTA 57.078 33.333 0.00 0.00 0.00 2.59
956 957 3.838317 ACAATAGAGTAGACCTGCAACCA 59.162 43.478 0.00 0.00 0.00 3.67
1251 1265 0.883833 CCTTCACACAGCCCATGAAC 59.116 55.000 0.00 0.00 0.00 3.18
1261 1275 2.030371 TGCATTTGCTTCCTTCACACA 58.970 42.857 3.94 0.00 42.66 3.72
1324 1338 5.192927 GTGGTGGATGATTGGAAAGACATA 58.807 41.667 0.00 0.00 29.51 2.29
1692 1721 1.892474 TGTGCATAGGGCCAAGAAAAC 59.108 47.619 6.18 0.00 43.89 2.43
1774 1803 6.708054 CACTCTGATCTAAAAGGTTGACTTGT 59.292 38.462 0.00 0.00 39.96 3.16
1775 1804 6.708054 ACACTCTGATCTAAAAGGTTGACTTG 59.292 38.462 0.00 0.00 39.96 3.16
1776 1805 6.831976 ACACTCTGATCTAAAAGGTTGACTT 58.168 36.000 0.00 0.00 42.52 3.01
1777 1806 6.268847 AGACACTCTGATCTAAAAGGTTGACT 59.731 38.462 0.00 0.00 0.00 3.41
1778 1807 6.459923 AGACACTCTGATCTAAAAGGTTGAC 58.540 40.000 0.00 0.00 0.00 3.18
1779 1808 6.672266 AGACACTCTGATCTAAAAGGTTGA 57.328 37.500 0.00 0.00 0.00 3.18
1780 1809 8.877779 CATAAGACACTCTGATCTAAAAGGTTG 58.122 37.037 0.00 0.00 0.00 3.77
1781 1810 7.550906 GCATAAGACACTCTGATCTAAAAGGTT 59.449 37.037 0.00 0.00 0.00 3.50
1782 1811 7.044798 GCATAAGACACTCTGATCTAAAAGGT 58.955 38.462 0.00 0.00 0.00 3.50
1783 1812 6.481644 GGCATAAGACACTCTGATCTAAAAGG 59.518 42.308 0.00 0.00 0.00 3.11
1784 1813 7.044181 TGGCATAAGACACTCTGATCTAAAAG 58.956 38.462 0.00 0.00 0.00 2.27
1785 1814 6.946340 TGGCATAAGACACTCTGATCTAAAA 58.054 36.000 0.00 0.00 0.00 1.52
1786 1815 6.544928 TGGCATAAGACACTCTGATCTAAA 57.455 37.500 0.00 0.00 0.00 1.85
1798 1827 2.355197 CATGGAACGTGGCATAAGACA 58.645 47.619 0.00 0.00 0.00 3.41
1799 1828 1.064060 GCATGGAACGTGGCATAAGAC 59.936 52.381 0.00 0.00 0.00 3.01
1800 1829 1.065491 AGCATGGAACGTGGCATAAGA 60.065 47.619 0.00 0.00 0.00 2.10
1801 1830 1.331756 GAGCATGGAACGTGGCATAAG 59.668 52.381 0.00 0.00 0.00 1.73
1802 1831 1.339535 TGAGCATGGAACGTGGCATAA 60.340 47.619 0.00 0.00 0.00 1.90
1803 1832 0.251634 TGAGCATGGAACGTGGCATA 59.748 50.000 0.00 0.00 0.00 3.14
1804 1833 0.394762 ATGAGCATGGAACGTGGCAT 60.395 50.000 0.00 0.00 0.00 4.40
1805 1834 0.608856 AATGAGCATGGAACGTGGCA 60.609 50.000 0.00 0.00 0.00 4.92
1806 1835 0.099436 GAATGAGCATGGAACGTGGC 59.901 55.000 0.00 0.00 0.00 5.01
1807 1836 0.734889 GGAATGAGCATGGAACGTGG 59.265 55.000 0.00 0.00 0.00 4.94
1808 1837 0.374758 CGGAATGAGCATGGAACGTG 59.625 55.000 0.00 0.00 0.00 4.49
1809 1838 0.744414 CCGGAATGAGCATGGAACGT 60.744 55.000 0.00 0.00 0.00 3.99
1810 1839 0.744414 ACCGGAATGAGCATGGAACG 60.744 55.000 9.46 0.00 0.00 3.95
1811 1840 0.734889 CACCGGAATGAGCATGGAAC 59.265 55.000 9.46 0.00 0.00 3.62
1812 1841 0.327924 ACACCGGAATGAGCATGGAA 59.672 50.000 9.46 0.00 0.00 3.53
1813 1842 0.327924 AACACCGGAATGAGCATGGA 59.672 50.000 9.46 0.00 0.00 3.41
1814 1843 0.734889 GAACACCGGAATGAGCATGG 59.265 55.000 9.46 0.00 0.00 3.66
1815 1844 1.742761 AGAACACCGGAATGAGCATG 58.257 50.000 9.46 0.00 0.00 4.06
1816 1845 2.489329 CAAAGAACACCGGAATGAGCAT 59.511 45.455 9.46 0.00 0.00 3.79
1817 1846 1.879380 CAAAGAACACCGGAATGAGCA 59.121 47.619 9.46 0.00 0.00 4.26
1818 1847 1.401539 GCAAAGAACACCGGAATGAGC 60.402 52.381 9.46 0.00 0.00 4.26
1819 1848 1.879380 TGCAAAGAACACCGGAATGAG 59.121 47.619 9.46 0.00 0.00 2.90
1820 1849 1.974265 TGCAAAGAACACCGGAATGA 58.026 45.000 9.46 0.00 0.00 2.57
1821 1850 3.244976 GAATGCAAAGAACACCGGAATG 58.755 45.455 9.46 0.00 0.00 2.67
1822 1851 2.890311 TGAATGCAAAGAACACCGGAAT 59.110 40.909 9.46 0.00 0.00 3.01
1823 1852 2.302260 TGAATGCAAAGAACACCGGAA 58.698 42.857 9.46 0.00 0.00 4.30
1824 1853 1.974265 TGAATGCAAAGAACACCGGA 58.026 45.000 9.46 0.00 0.00 5.14
1825 1854 2.988493 CAATGAATGCAAAGAACACCGG 59.012 45.455 0.00 0.00 0.00 5.28
1826 1855 3.641648 ACAATGAATGCAAAGAACACCG 58.358 40.909 0.00 0.00 0.00 4.94
1827 1856 6.311200 GGAATACAATGAATGCAAAGAACACC 59.689 38.462 0.00 0.00 0.00 4.16
1828 1857 6.867816 TGGAATACAATGAATGCAAAGAACAC 59.132 34.615 0.00 0.00 0.00 3.32
1829 1858 6.990798 TGGAATACAATGAATGCAAAGAACA 58.009 32.000 0.00 0.00 0.00 3.18
1830 1859 6.035327 GCTGGAATACAATGAATGCAAAGAAC 59.965 38.462 0.00 0.00 0.00 3.01
1831 1860 6.101332 GCTGGAATACAATGAATGCAAAGAA 58.899 36.000 0.00 0.00 0.00 2.52
1832 1861 5.653507 GCTGGAATACAATGAATGCAAAGA 58.346 37.500 0.00 0.00 0.00 2.52
1833 1862 4.501559 CGCTGGAATACAATGAATGCAAAG 59.498 41.667 0.00 0.00 0.00 2.77
1834 1863 4.422840 CGCTGGAATACAATGAATGCAAA 58.577 39.130 0.00 0.00 0.00 3.68
1835 1864 3.734597 GCGCTGGAATACAATGAATGCAA 60.735 43.478 0.00 0.00 0.00 4.08
1836 1865 2.223548 GCGCTGGAATACAATGAATGCA 60.224 45.455 0.00 0.00 0.00 3.96
1837 1866 2.223548 TGCGCTGGAATACAATGAATGC 60.224 45.455 9.73 0.00 0.00 3.56
1838 1867 3.696281 TGCGCTGGAATACAATGAATG 57.304 42.857 9.73 0.00 0.00 2.67
1839 1868 3.884693 TCATGCGCTGGAATACAATGAAT 59.115 39.130 9.73 0.00 0.00 2.57
1840 1869 3.277715 TCATGCGCTGGAATACAATGAA 58.722 40.909 9.73 0.00 0.00 2.57
1841 1870 2.874086 CTCATGCGCTGGAATACAATGA 59.126 45.455 9.73 4.98 0.00 2.57
1842 1871 2.615447 ACTCATGCGCTGGAATACAATG 59.385 45.455 9.73 0.00 0.00 2.82
1843 1872 2.923121 ACTCATGCGCTGGAATACAAT 58.077 42.857 9.73 0.00 0.00 2.71
1844 1873 2.401583 ACTCATGCGCTGGAATACAA 57.598 45.000 9.73 0.00 0.00 2.41
1845 1874 3.751479 ATACTCATGCGCTGGAATACA 57.249 42.857 9.73 0.00 0.00 2.29
1846 1875 4.776743 CAAATACTCATGCGCTGGAATAC 58.223 43.478 9.73 0.00 0.00 1.89
1847 1876 3.250762 GCAAATACTCATGCGCTGGAATA 59.749 43.478 9.73 0.14 32.17 1.75
1848 1877 2.033801 GCAAATACTCATGCGCTGGAAT 59.966 45.455 9.73 0.00 32.17 3.01
1849 1878 1.401552 GCAAATACTCATGCGCTGGAA 59.598 47.619 9.73 0.00 32.17 3.53
1850 1879 1.016627 GCAAATACTCATGCGCTGGA 58.983 50.000 9.73 5.05 32.17 3.86
1851 1880 1.019673 AGCAAATACTCATGCGCTGG 58.980 50.000 9.73 0.00 46.98 4.85
1852 1881 2.540361 GGAAGCAAATACTCATGCGCTG 60.540 50.000 9.73 4.58 46.98 5.18
1853 1882 1.672881 GGAAGCAAATACTCATGCGCT 59.327 47.619 9.73 0.00 46.98 5.92
1854 1883 1.672881 AGGAAGCAAATACTCATGCGC 59.327 47.619 0.00 0.00 46.98 6.09
1855 1884 4.260784 GGTTAGGAAGCAAATACTCATGCG 60.261 45.833 0.00 0.00 46.98 4.73
1856 1885 4.884164 AGGTTAGGAAGCAAATACTCATGC 59.116 41.667 0.00 0.00 42.87 4.06
1857 1886 6.375455 ACAAGGTTAGGAAGCAAATACTCATG 59.625 38.462 0.00 0.00 0.00 3.07
1858 1887 6.485171 ACAAGGTTAGGAAGCAAATACTCAT 58.515 36.000 0.00 0.00 0.00 2.90
1859 1888 5.876357 ACAAGGTTAGGAAGCAAATACTCA 58.124 37.500 0.00 0.00 0.00 3.41
1860 1889 6.655425 AGAACAAGGTTAGGAAGCAAATACTC 59.345 38.462 0.00 0.00 0.00 2.59
1861 1890 6.431234 CAGAACAAGGTTAGGAAGCAAATACT 59.569 38.462 0.00 0.00 0.00 2.12
1862 1891 6.612306 CAGAACAAGGTTAGGAAGCAAATAC 58.388 40.000 0.00 0.00 0.00 1.89
1863 1892 5.183140 GCAGAACAAGGTTAGGAAGCAAATA 59.817 40.000 0.00 0.00 0.00 1.40
1864 1893 4.021981 GCAGAACAAGGTTAGGAAGCAAAT 60.022 41.667 0.00 0.00 0.00 2.32
1865 1894 3.317993 GCAGAACAAGGTTAGGAAGCAAA 59.682 43.478 0.00 0.00 0.00 3.68
1866 1895 2.884639 GCAGAACAAGGTTAGGAAGCAA 59.115 45.455 0.00 0.00 0.00 3.91
1867 1896 2.504367 GCAGAACAAGGTTAGGAAGCA 58.496 47.619 0.00 0.00 0.00 3.91
1868 1897 1.813178 GGCAGAACAAGGTTAGGAAGC 59.187 52.381 0.00 0.00 0.00 3.86
1869 1898 3.425162 AGGCAGAACAAGGTTAGGAAG 57.575 47.619 0.00 0.00 0.00 3.46
1870 1899 3.876309 AAGGCAGAACAAGGTTAGGAA 57.124 42.857 0.00 0.00 0.00 3.36
1871 1900 3.876309 AAAGGCAGAACAAGGTTAGGA 57.124 42.857 0.00 0.00 0.00 2.94
1872 1901 3.552890 GCAAAAGGCAGAACAAGGTTAGG 60.553 47.826 0.00 0.00 43.97 2.69
1873 1902 3.642705 GCAAAAGGCAGAACAAGGTTAG 58.357 45.455 0.00 0.00 43.97 2.34
1874 1903 3.726291 GCAAAAGGCAGAACAAGGTTA 57.274 42.857 0.00 0.00 43.97 2.85
1875 1904 2.602257 GCAAAAGGCAGAACAAGGTT 57.398 45.000 0.00 0.00 43.97 3.50
1886 1915 2.414138 GCAGACAATGAATGCAAAAGGC 59.586 45.455 8.95 0.00 45.13 4.35
1887 1916 2.997986 GGCAGACAATGAATGCAAAAGG 59.002 45.455 14.13 0.00 41.78 3.11
1888 1917 3.921677 AGGCAGACAATGAATGCAAAAG 58.078 40.909 14.13 0.00 41.78 2.27
1889 1918 4.339872 AAGGCAGACAATGAATGCAAAA 57.660 36.364 14.13 0.00 41.78 2.44
1890 1919 4.059511 CAAAGGCAGACAATGAATGCAAA 58.940 39.130 14.13 0.00 41.78 3.68
1891 1920 3.069872 ACAAAGGCAGACAATGAATGCAA 59.930 39.130 14.13 0.00 41.78 4.08
1892 1921 2.629137 ACAAAGGCAGACAATGAATGCA 59.371 40.909 14.13 0.00 41.78 3.96
1893 1922 3.308438 ACAAAGGCAGACAATGAATGC 57.692 42.857 6.01 6.01 39.25 3.56
1894 1923 4.218200 TGGTACAAAGGCAGACAATGAATG 59.782 41.667 0.00 0.00 31.92 2.67
1895 1924 4.406456 TGGTACAAAGGCAGACAATGAAT 58.594 39.130 0.00 0.00 31.92 2.57
1896 1925 3.820467 CTGGTACAAAGGCAGACAATGAA 59.180 43.478 0.00 0.00 38.70 2.57
1897 1926 3.072330 TCTGGTACAAAGGCAGACAATGA 59.928 43.478 0.00 0.00 38.70 2.57
1898 1927 3.411446 TCTGGTACAAAGGCAGACAATG 58.589 45.455 0.00 0.00 38.70 2.82
1899 1928 3.788227 TCTGGTACAAAGGCAGACAAT 57.212 42.857 0.00 0.00 38.70 2.71
1900 1929 3.788227 ATCTGGTACAAAGGCAGACAA 57.212 42.857 1.49 0.00 38.70 3.18
1901 1930 3.838317 ACTATCTGGTACAAAGGCAGACA 59.162 43.478 1.49 0.00 38.70 3.41
1902 1931 4.473477 ACTATCTGGTACAAAGGCAGAC 57.527 45.455 1.49 0.00 38.70 3.51
1903 1932 6.837048 TGTATACTATCTGGTACAAAGGCAGA 59.163 38.462 4.17 0.00 38.70 4.26
1904 1933 7.050970 TGTATACTATCTGGTACAAAGGCAG 57.949 40.000 4.17 0.00 38.70 4.85
1905 1934 7.125204 ACTTGTATACTATCTGGTACAAAGGCA 59.875 37.037 4.17 0.00 38.70 4.75
1906 1935 7.498443 ACTTGTATACTATCTGGTACAAAGGC 58.502 38.462 4.17 0.00 38.70 4.35
1907 1936 8.142551 GGACTTGTATACTATCTGGTACAAAGG 58.857 40.741 4.17 0.00 38.70 3.11
1908 1937 8.142551 GGGACTTGTATACTATCTGGTACAAAG 58.857 40.741 4.17 0.00 38.70 2.77
1909 1938 7.620491 TGGGACTTGTATACTATCTGGTACAAA 59.380 37.037 4.17 0.00 38.70 2.83
1910 1939 7.127405 TGGGACTTGTATACTATCTGGTACAA 58.873 38.462 4.17 0.00 38.70 2.41
1911 1940 6.675565 TGGGACTTGTATACTATCTGGTACA 58.324 40.000 4.17 0.00 0.00 2.90
1912 1941 7.603651 CATGGGACTTGTATACTATCTGGTAC 58.396 42.308 4.17 0.00 0.00 3.34
1922 2964 5.615289 AGAATGAGCATGGGACTTGTATAC 58.385 41.667 0.00 0.00 0.00 1.47
1945 2987 6.432472 TGTGGTCAATTCACTGTAAATGCATA 59.568 34.615 0.00 0.00 36.21 3.14
1946 2988 5.243507 TGTGGTCAATTCACTGTAAATGCAT 59.756 36.000 0.00 0.00 36.21 3.96
1963 3005 5.818678 AGTATTAAGTGGTTCTGTGGTCA 57.181 39.130 0.00 0.00 0.00 4.02
1967 3009 7.011109 CCCGATTAAGTATTAAGTGGTTCTGTG 59.989 40.741 0.00 0.00 44.82 3.66
2005 3075 8.696043 AATAAATTGATGGATAAGTGCTAGCA 57.304 30.769 14.93 14.93 0.00 3.49
2038 3108 6.374613 GTGATACCCTTTAACTTTTCAGGAGG 59.625 42.308 0.00 0.00 0.00 4.30
2040 3110 5.935789 CGTGATACCCTTTAACTTTTCAGGA 59.064 40.000 0.00 0.00 0.00 3.86
2046 3116 4.287845 ACCCTCGTGATACCCTTTAACTTT 59.712 41.667 0.00 0.00 0.00 2.66
2052 3122 0.909623 CCACCCTCGTGATACCCTTT 59.090 55.000 0.00 0.00 43.14 3.11
2063 3133 2.416747 CATATATGTGTGCCACCCTCG 58.583 52.381 4.43 0.00 32.73 4.63
2075 3145 6.959954 TCCAGTACCTATCCTTGCATATATGT 59.040 38.462 14.14 0.00 0.00 2.29
2097 3167 1.626825 GCACTACCCTGGTACTTTCCA 59.373 52.381 0.00 0.00 36.00 3.53
2098 3168 1.907255 AGCACTACCCTGGTACTTTCC 59.093 52.381 0.00 0.00 0.00 3.13
2099 3169 2.093606 GGAGCACTACCCTGGTACTTTC 60.094 54.545 0.00 0.00 0.00 2.62
2107 3177 0.620556 ACCATTGGAGCACTACCCTG 59.379 55.000 10.37 0.00 0.00 4.45
2118 3188 7.682132 AAGCACACTTAGACCAACCATTGGA 62.682 44.000 14.47 0.00 43.58 3.53
2120 3190 3.149196 AGCACACTTAGACCAACCATTG 58.851 45.455 0.00 0.00 0.00 2.82
2164 3234 3.602075 TACAGAGCTCCGCCCCTGT 62.602 63.158 10.93 9.66 42.42 4.00
2165 3235 2.759973 TACAGAGCTCCGCCCCTG 60.760 66.667 10.93 3.23 36.37 4.45
2167 3237 3.541713 CCTACAGAGCTCCGCCCC 61.542 72.222 10.93 0.00 0.00 5.80
2168 3238 3.541713 CCCTACAGAGCTCCGCCC 61.542 72.222 10.93 0.00 0.00 6.13
2169 3239 3.541713 CCCCTACAGAGCTCCGCC 61.542 72.222 10.93 0.00 0.00 6.13
2170 3240 4.228567 GCCCCTACAGAGCTCCGC 62.229 72.222 10.93 0.00 0.00 5.54
2171 3241 1.899437 TTTGCCCCTACAGAGCTCCG 61.899 60.000 10.93 1.77 0.00 4.63
2172 3242 0.393132 GTTTGCCCCTACAGAGCTCC 60.393 60.000 10.93 0.00 0.00 4.70
2173 3243 0.393132 GGTTTGCCCCTACAGAGCTC 60.393 60.000 5.27 5.27 0.00 4.09
2174 3244 1.685820 GGTTTGCCCCTACAGAGCT 59.314 57.895 0.00 0.00 0.00 4.09
2175 3245 4.320910 GGTTTGCCCCTACAGAGC 57.679 61.111 0.00 0.00 0.00 4.09
2200 3270 1.304052 CAAATTCCTGGACGGGCCA 60.304 57.895 4.39 0.77 46.96 5.36
2201 3271 1.001393 TCAAATTCCTGGACGGGCC 60.001 57.895 0.00 0.00 37.10 5.80
2202 3272 0.608035 TGTCAAATTCCTGGACGGGC 60.608 55.000 0.00 0.00 34.32 6.13
2203 3273 1.904287 TTGTCAAATTCCTGGACGGG 58.096 50.000 0.00 0.00 34.32 5.28
2204 3274 4.314740 TTTTTGTCAAATTCCTGGACGG 57.685 40.909 0.00 0.00 34.32 4.79
2224 3294 7.554211 AGCTAAGACGCCTAGTAGTAATTTTT 58.446 34.615 0.00 0.00 0.00 1.94
2225 3295 7.110043 AGCTAAGACGCCTAGTAGTAATTTT 57.890 36.000 0.00 0.00 0.00 1.82
2226 3296 6.712179 AGCTAAGACGCCTAGTAGTAATTT 57.288 37.500 0.00 0.00 0.00 1.82
2227 3297 6.430616 CCTAGCTAAGACGCCTAGTAGTAATT 59.569 42.308 0.00 0.00 0.00 1.40
2228 3298 5.939296 CCTAGCTAAGACGCCTAGTAGTAAT 59.061 44.000 0.00 0.00 0.00 1.89
2229 3299 5.303971 CCTAGCTAAGACGCCTAGTAGTAA 58.696 45.833 0.00 0.00 0.00 2.24
2230 3300 4.802248 GCCTAGCTAAGACGCCTAGTAGTA 60.802 50.000 0.00 0.00 0.00 1.82
2231 3301 3.742385 CCTAGCTAAGACGCCTAGTAGT 58.258 50.000 0.00 0.00 0.00 2.73
2232 3302 2.485038 GCCTAGCTAAGACGCCTAGTAG 59.515 54.545 0.00 0.00 0.00 2.57
2233 3303 2.502295 GCCTAGCTAAGACGCCTAGTA 58.498 52.381 0.00 0.00 0.00 1.82
2234 3304 1.320507 GCCTAGCTAAGACGCCTAGT 58.679 55.000 0.00 0.00 0.00 2.57
2235 3305 0.238817 CGCCTAGCTAAGACGCCTAG 59.761 60.000 0.00 0.00 0.00 3.02
2236 3306 0.465097 ACGCCTAGCTAAGACGCCTA 60.465 55.000 9.02 0.00 0.00 3.93
2237 3307 1.726533 GACGCCTAGCTAAGACGCCT 61.727 60.000 9.02 0.00 0.00 5.52
2238 3308 1.299240 GACGCCTAGCTAAGACGCC 60.299 63.158 9.02 0.00 0.00 5.68
2239 3309 0.100861 AAGACGCCTAGCTAAGACGC 59.899 55.000 9.02 1.73 0.00 5.19
2240 3310 2.602694 GCTAAGACGCCTAGCTAAGACG 60.603 54.545 7.86 7.86 34.27 4.18
2241 3311 2.287728 GGCTAAGACGCCTAGCTAAGAC 60.288 54.545 9.92 0.00 46.63 3.01
2242 3312 1.955080 GGCTAAGACGCCTAGCTAAGA 59.045 52.381 9.92 0.00 46.63 2.10
2243 3313 2.425578 GGCTAAGACGCCTAGCTAAG 57.574 55.000 9.92 0.00 46.63 2.18
2252 3322 1.448013 GTGGACTGGGCTAAGACGC 60.448 63.158 0.00 0.00 0.00 5.19
2253 3323 1.471119 TAGTGGACTGGGCTAAGACG 58.529 55.000 0.00 0.00 0.00 4.18
2254 3324 2.418884 GCTTAGTGGACTGGGCTAAGAC 60.419 54.545 12.89 3.26 42.35 3.01
2255 3325 1.831736 GCTTAGTGGACTGGGCTAAGA 59.168 52.381 12.89 0.00 42.35 2.10
2256 3326 1.134371 GGCTTAGTGGACTGGGCTAAG 60.134 57.143 0.00 0.00 42.53 2.18
2257 3327 0.909623 GGCTTAGTGGACTGGGCTAA 59.090 55.000 0.00 0.00 0.00 3.09
2258 3328 0.981277 GGGCTTAGTGGACTGGGCTA 60.981 60.000 0.00 0.00 0.00 3.93
2259 3329 2.301738 GGGCTTAGTGGACTGGGCT 61.302 63.158 0.00 0.00 0.00 5.19
2260 3330 2.272471 GGGCTTAGTGGACTGGGC 59.728 66.667 0.00 0.00 0.00 5.36
2261 3331 1.299976 GTGGGCTTAGTGGACTGGG 59.700 63.158 0.00 0.00 0.00 4.45
2262 3332 1.079127 CGTGGGCTTAGTGGACTGG 60.079 63.158 0.00 0.00 0.00 4.00
2263 3333 1.741770 GCGTGGGCTTAGTGGACTG 60.742 63.158 0.00 0.00 35.83 3.51
2264 3334 2.214216 TGCGTGGGCTTAGTGGACT 61.214 57.895 0.00 0.00 40.82 3.85
2265 3335 2.033194 GTGCGTGGGCTTAGTGGAC 61.033 63.158 0.00 0.00 40.82 4.02
2266 3336 2.345991 GTGCGTGGGCTTAGTGGA 59.654 61.111 0.00 0.00 40.82 4.02
2267 3337 3.118454 CGTGCGTGGGCTTAGTGG 61.118 66.667 0.00 0.00 40.82 4.00
2268 3338 3.788766 GCGTGCGTGGGCTTAGTG 61.789 66.667 0.00 0.00 40.82 2.74
2269 3339 4.308458 TGCGTGCGTGGGCTTAGT 62.308 61.111 0.00 0.00 40.82 2.24
2270 3340 3.788766 GTGCGTGCGTGGGCTTAG 61.789 66.667 0.00 0.00 40.82 2.18
2271 3341 4.610714 TGTGCGTGCGTGGGCTTA 62.611 61.111 0.00 0.00 40.82 3.09
2277 3347 2.802667 GATAGCCTGTGCGTGCGTG 61.803 63.158 0.00 0.00 44.33 5.34
2278 3348 2.509336 GATAGCCTGTGCGTGCGT 60.509 61.111 0.00 0.00 44.33 5.24
2279 3349 3.264897 GGATAGCCTGTGCGTGCG 61.265 66.667 0.00 0.00 44.33 5.34
2280 3350 2.897350 GGGATAGCCTGTGCGTGC 60.897 66.667 0.00 0.00 44.33 5.34
2281 3351 2.203070 GGGGATAGCCTGTGCGTG 60.203 66.667 0.00 0.00 44.33 5.34
2282 3352 2.044806 GATGGGGATAGCCTGTGCGT 62.045 60.000 0.00 0.00 44.33 5.24
2283 3353 1.302033 GATGGGGATAGCCTGTGCG 60.302 63.158 0.00 0.00 44.33 5.34
2284 3354 1.302033 CGATGGGGATAGCCTGTGC 60.302 63.158 0.00 0.00 37.95 4.57
2285 3355 1.372683 CCGATGGGGATAGCCTGTG 59.627 63.158 0.00 0.00 38.47 3.66
2286 3356 2.520536 GCCGATGGGGATAGCCTGT 61.521 63.158 0.00 0.00 38.47 4.00
2287 3357 2.348998 GCCGATGGGGATAGCCTG 59.651 66.667 0.00 0.00 38.47 4.85
2288 3358 2.930562 GGCCGATGGGGATAGCCT 60.931 66.667 0.00 0.00 40.57 4.58
2289 3359 2.543067 GATGGCCGATGGGGATAGCC 62.543 65.000 0.00 0.00 44.13 3.93
2290 3360 1.078143 GATGGCCGATGGGGATAGC 60.078 63.158 0.00 0.00 38.47 2.97
2291 3361 1.219124 CGATGGCCGATGGGGATAG 59.781 63.158 0.00 0.00 41.76 2.08
2292 3362 1.535444 ACGATGGCCGATGGGGATA 60.535 57.895 0.00 0.00 41.76 2.59
2293 3363 2.849162 ACGATGGCCGATGGGGAT 60.849 61.111 0.00 0.00 41.76 3.85
2294 3364 3.546543 GACGATGGCCGATGGGGA 61.547 66.667 0.00 0.00 41.76 4.81
2295 3365 4.969196 CGACGATGGCCGATGGGG 62.969 72.222 0.00 0.00 41.76 4.96
2303 3373 4.593864 GGAGGAGGCGACGATGGC 62.594 72.222 0.00 0.00 0.00 4.40
2304 3374 2.835431 AGGAGGAGGCGACGATGG 60.835 66.667 0.00 0.00 0.00 3.51
2305 3375 1.791103 GAGAGGAGGAGGCGACGATG 61.791 65.000 0.00 0.00 0.00 3.84
2306 3376 1.527380 GAGAGGAGGAGGCGACGAT 60.527 63.158 0.00 0.00 0.00 3.73
2307 3377 2.124653 GAGAGGAGGAGGCGACGA 60.125 66.667 0.00 0.00 0.00 4.20
2308 3378 2.438614 TGAGAGGAGGAGGCGACG 60.439 66.667 0.00 0.00 0.00 5.12
2309 3379 2.766400 CGTGAGAGGAGGAGGCGAC 61.766 68.421 0.00 0.00 0.00 5.19
2310 3380 2.438614 CGTGAGAGGAGGAGGCGA 60.439 66.667 0.00 0.00 0.00 5.54
2311 3381 4.200283 GCGTGAGAGGAGGAGGCG 62.200 72.222 0.00 0.00 0.00 5.52
2312 3382 3.071206 TGCGTGAGAGGAGGAGGC 61.071 66.667 0.00 0.00 0.00 4.70
2313 3383 2.888863 GTGCGTGAGAGGAGGAGG 59.111 66.667 0.00 0.00 0.00 4.30
2314 3384 2.487428 CGTGCGTGAGAGGAGGAG 59.513 66.667 0.00 0.00 0.00 3.69
2315 3385 3.749064 GCGTGCGTGAGAGGAGGA 61.749 66.667 0.00 0.00 0.00 3.71
2316 3386 3.753434 AGCGTGCGTGAGAGGAGG 61.753 66.667 0.00 0.00 0.00 4.30
2317 3387 2.505777 CAGCGTGCGTGAGAGGAG 60.506 66.667 0.00 0.00 0.00 3.69
2318 3388 4.724602 GCAGCGTGCGTGAGAGGA 62.725 66.667 0.00 0.00 31.71 3.71
2332 3402 2.745100 ATGTGCCTCTGCGTGCAG 60.745 61.111 15.59 15.59 44.86 4.41
2333 3403 3.051479 CATGTGCCTCTGCGTGCA 61.051 61.111 0.00 0.00 41.78 4.57
2334 3404 4.471726 GCATGTGCCTCTGCGTGC 62.472 66.667 0.00 0.00 41.78 5.34
2335 3405 2.249557 GAAGCATGTGCCTCTGCGTG 62.250 60.000 0.57 0.00 43.17 5.34
2336 3406 2.033141 AAGCATGTGCCTCTGCGT 59.967 55.556 0.57 0.00 43.17 5.24
2337 3407 2.758089 GGAAGCATGTGCCTCTGCG 61.758 63.158 0.57 0.00 43.17 5.18
2338 3408 2.413142 GGGAAGCATGTGCCTCTGC 61.413 63.158 0.57 0.00 43.38 4.26
2339 3409 1.751927 GGGGAAGCATGTGCCTCTG 60.752 63.158 0.57 0.00 43.38 3.35
2340 3410 1.792757 TTGGGGAAGCATGTGCCTCT 61.793 55.000 0.57 0.00 43.38 3.69
2341 3411 0.685458 ATTGGGGAAGCATGTGCCTC 60.685 55.000 0.57 0.00 43.38 4.70
2342 3412 0.252375 AATTGGGGAAGCATGTGCCT 60.252 50.000 0.57 0.00 43.38 4.75
2343 3413 0.176449 GAATTGGGGAAGCATGTGCC 59.824 55.000 0.57 0.00 43.38 5.01
2344 3414 0.176449 GGAATTGGGGAAGCATGTGC 59.824 55.000 0.00 0.00 42.49 4.57
2345 3415 0.826062 GGGAATTGGGGAAGCATGTG 59.174 55.000 0.00 0.00 0.00 3.21
2346 3416 0.325577 GGGGAATTGGGGAAGCATGT 60.326 55.000 0.00 0.00 0.00 3.21
2347 3417 0.325484 TGGGGAATTGGGGAAGCATG 60.325 55.000 0.00 0.00 0.00 4.06
2348 3418 0.643822 ATGGGGAATTGGGGAAGCAT 59.356 50.000 0.00 0.00 0.00 3.79
2349 3419 0.032217 GATGGGGAATTGGGGAAGCA 60.032 55.000 0.00 0.00 0.00 3.91
2350 3420 0.760567 GGATGGGGAATTGGGGAAGC 60.761 60.000 0.00 0.00 0.00 3.86
2351 3421 0.936691 AGGATGGGGAATTGGGGAAG 59.063 55.000 0.00 0.00 0.00 3.46
2352 3422 0.933700 GAGGATGGGGAATTGGGGAA 59.066 55.000 0.00 0.00 0.00 3.97
2353 3423 0.254059 TGAGGATGGGGAATTGGGGA 60.254 55.000 0.00 0.00 0.00 4.81
2354 3424 0.186873 CTGAGGATGGGGAATTGGGG 59.813 60.000 0.00 0.00 0.00 4.96
2355 3425 0.929244 ACTGAGGATGGGGAATTGGG 59.071 55.000 0.00 0.00 0.00 4.12
2356 3426 1.849039 AGACTGAGGATGGGGAATTGG 59.151 52.381 0.00 0.00 0.00 3.16
2357 3427 2.507058 TGAGACTGAGGATGGGGAATTG 59.493 50.000 0.00 0.00 0.00 2.32
2358 3428 2.776536 CTGAGACTGAGGATGGGGAATT 59.223 50.000 0.00 0.00 0.00 2.17
2359 3429 2.022625 TCTGAGACTGAGGATGGGGAAT 60.023 50.000 0.00 0.00 0.00 3.01
2360 3430 1.362584 TCTGAGACTGAGGATGGGGAA 59.637 52.381 0.00 0.00 0.00 3.97
2361 3431 1.010795 TCTGAGACTGAGGATGGGGA 58.989 55.000 0.00 0.00 0.00 4.81
2362 3432 1.118838 GTCTGAGACTGAGGATGGGG 58.881 60.000 5.12 0.00 0.00 4.96
2363 3433 2.031120 GAGTCTGAGACTGAGGATGGG 58.969 57.143 21.45 0.00 43.53 4.00
2364 3434 1.675483 CGAGTCTGAGACTGAGGATGG 59.325 57.143 21.45 0.00 43.53 3.51
2403 3473 3.109592 TTCCTTGTCCACGGCGGTT 62.110 57.895 13.24 0.00 35.57 4.44
2483 3556 1.826921 GGGGCGAGTCGAGATACCA 60.827 63.158 18.61 0.00 0.00 3.25
2486 3559 2.194212 GCAGGGGCGAGTCGAGATA 61.194 63.158 18.61 0.00 0.00 1.98
2487 3560 3.532155 GCAGGGGCGAGTCGAGAT 61.532 66.667 18.61 0.00 0.00 2.75
2532 3605 3.227792 GATCGGAGTGGATCCCGGC 62.228 68.421 9.90 0.00 46.50 6.13
2534 3607 1.662608 CAGATCGGAGTGGATCCCG 59.337 63.158 9.90 5.47 46.50 5.14
2540 3613 2.187946 GGCACCAGATCGGAGTGG 59.812 66.667 10.05 7.47 39.98 4.00
2541 3614 1.448540 GTGGCACCAGATCGGAGTG 60.449 63.158 6.29 9.00 38.63 3.51
2542 3615 1.608717 GAGTGGCACCAGATCGGAGT 61.609 60.000 15.27 0.00 38.63 3.85
2543 3616 1.142748 GAGTGGCACCAGATCGGAG 59.857 63.158 15.27 4.11 38.63 4.63
2544 3617 2.359169 GGAGTGGCACCAGATCGGA 61.359 63.158 15.27 0.00 38.63 4.55
2545 3618 2.187946 GGAGTGGCACCAGATCGG 59.812 66.667 15.27 2.55 42.50 4.18
2546 3619 2.202797 CGGAGTGGCACCAGATCG 60.203 66.667 15.27 7.58 0.00 3.69
2547 3620 1.021390 CAACGGAGTGGCACCAGATC 61.021 60.000 15.27 4.94 45.00 2.75
2548 3621 1.003355 CAACGGAGTGGCACCAGAT 60.003 57.895 15.27 0.00 45.00 2.90
2549 3622 2.377628 GACAACGGAGTGGCACCAGA 62.378 60.000 15.27 0.00 45.00 3.86
2550 3623 1.961277 GACAACGGAGTGGCACCAG 60.961 63.158 15.27 8.52 45.00 4.00
2551 3624 2.110213 GACAACGGAGTGGCACCA 59.890 61.111 15.27 0.00 45.00 4.17
2552 3625 0.889186 ATTGACAACGGAGTGGCACC 60.889 55.000 15.27 5.76 45.00 5.01
2553 3626 0.951558 AATTGACAACGGAGTGGCAC 59.048 50.000 10.29 10.29 45.00 5.01
2554 3627 0.950836 CAATTGACAACGGAGTGGCA 59.049 50.000 0.00 0.00 45.00 4.92
2555 3628 0.240945 CCAATTGACAACGGAGTGGC 59.759 55.000 7.12 0.00 45.00 5.01
2585 3658 0.587768 TGATCTGCGTGTTGTTGCTG 59.412 50.000 0.00 0.00 0.00 4.41
2596 3669 1.002366 GCTGGTGTAAGTGATCTGCG 58.998 55.000 0.00 0.00 0.00 5.18
2605 3678 2.223711 GGTGGTTTGTTGCTGGTGTAAG 60.224 50.000 0.00 0.00 0.00 2.34
2606 3679 1.751924 GGTGGTTTGTTGCTGGTGTAA 59.248 47.619 0.00 0.00 0.00 2.41
2612 3685 1.110442 TCTTGGGTGGTTTGTTGCTG 58.890 50.000 0.00 0.00 0.00 4.41
2626 3699 1.516864 GTTTTTCTTTGCGCGTCTTGG 59.483 47.619 8.43 0.00 0.00 3.61
2633 3706 5.154222 ACATAAGCTAGTTTTTCTTTGCGC 58.846 37.500 0.00 0.00 32.58 6.09
2634 3707 7.078228 AGAACATAAGCTAGTTTTTCTTTGCG 58.922 34.615 0.00 0.00 32.58 4.85
2635 3708 8.803201 AAGAACATAAGCTAGTTTTTCTTTGC 57.197 30.769 10.14 0.00 29.61 3.68
2655 3728 7.648142 TGGTTTGTGATGAAGTGATAAAGAAC 58.352 34.615 0.00 0.00 0.00 3.01
2767 3840 6.897986 AGGGAAGAGAGACTAACGAACTATA 58.102 40.000 0.00 0.00 0.00 1.31
2783 3858 9.158233 TCATTTTTATTGTACGTAAGGGAAGAG 57.842 33.333 0.00 0.00 46.39 2.85
2814 3890 9.852091 AATTTATGCAAAAATTGTGTGTTTTGT 57.148 22.222 9.77 0.00 43.50 2.83
2842 3918 8.816640 AAAATTCTTATGCGAGTTGTCATTTT 57.183 26.923 0.00 0.00 0.00 1.82
2885 3962 7.829211 ACATGCATAAGTGTTCTACATTAGGTT 59.171 33.333 0.00 0.00 0.00 3.50
2887 3964 7.792374 ACATGCATAAGTGTTCTACATTAGG 57.208 36.000 0.00 0.00 0.00 2.69
2891 3968 6.649155 TGGTACATGCATAAGTGTTCTACAT 58.351 36.000 0.00 0.00 0.00 2.29
2899 3976 6.446318 ACAAAGTTTGGTACATGCATAAGTG 58.554 36.000 19.45 0.00 39.30 3.16
2979 4061 3.632145 CGCCACAGGGATTAATAAGCTTT 59.368 43.478 3.20 0.00 35.59 3.51
3008 4090 1.401800 CGTGTAGTGTGTGACGGCATA 60.402 52.381 0.00 0.00 0.00 3.14
3009 4091 0.666274 CGTGTAGTGTGTGACGGCAT 60.666 55.000 0.00 0.00 0.00 4.40
3010 4092 1.299544 CGTGTAGTGTGTGACGGCA 60.300 57.895 0.00 0.00 0.00 5.69
3012 4094 0.239082 TAGCGTGTAGTGTGTGACGG 59.761 55.000 0.00 0.00 32.45 4.79
3015 4097 7.974482 ATATATACTAGCGTGTAGTGTGTGA 57.026 36.000 9.19 0.00 0.00 3.58
3016 4098 9.148104 TCTATATATACTAGCGTGTAGTGTGTG 57.852 37.037 9.19 0.00 0.00 3.82
3017 4099 9.887629 ATCTATATATACTAGCGTGTAGTGTGT 57.112 33.333 9.19 4.72 0.00 3.72
3041 4123 7.254932 GGTCACAAATTTGAGCTACCAGATATC 60.255 40.741 24.64 0.00 40.25 1.63
3042 4124 6.543831 GGTCACAAATTTGAGCTACCAGATAT 59.456 38.462 24.64 0.00 40.25 1.63
3058 4140 4.837093 TCTAAATCCCGAGGTCACAAAT 57.163 40.909 0.00 0.00 0.00 2.32
3059 4141 4.627284 TTCTAAATCCCGAGGTCACAAA 57.373 40.909 0.00 0.00 0.00 2.83
3103 4185 3.567478 GAAAAAGTTGGGCGGGCCG 62.567 63.158 24.35 24.35 36.85 6.13
3112 4194 3.035942 CGGAGCTTGAACGAAAAAGTTG 58.964 45.455 0.00 0.00 34.00 3.16
3343 4425 5.185454 TGTTTTGATTGACTGACACTGAGT 58.815 37.500 0.00 0.00 0.00 3.41
3412 4494 8.071177 TCTCATCTGACACTTCATCTAATTGA 57.929 34.615 0.00 0.00 0.00 2.57
3962 5056 1.612950 TGCTGGTGTAGTTGCAAATGG 59.387 47.619 10.14 0.00 32.12 3.16
4102 5205 2.480416 CCTGAGGTCGAAGTATGTGCTC 60.480 54.545 0.00 0.00 0.00 4.26
4561 5691 1.607628 AGTTCTGTAGTTCGTCGCTGT 59.392 47.619 0.00 0.00 0.00 4.40
4970 6292 2.434702 ACTCTTGTTTCCGACTTCCAGT 59.565 45.455 0.00 0.00 0.00 4.00
4981 6303 1.268079 GCTTGCTGGGACTCTTGTTTC 59.732 52.381 0.00 0.00 0.00 2.78
5048 6370 5.476945 GTGTTGAACCAGGATAAGAAACCAT 59.523 40.000 0.00 0.00 0.00 3.55
5049 6371 4.825085 GTGTTGAACCAGGATAAGAAACCA 59.175 41.667 0.00 0.00 0.00 3.67
5132 6454 7.175104 TGGCTAATTAATCCTCAGTTTGTCTT 58.825 34.615 0.00 0.00 0.00 3.01
5233 6556 6.183360 ACAATAAAAGGTGGAAGTTGAGTTGG 60.183 38.462 0.00 0.00 0.00 3.77
5278 6601 3.760738 TGCACCTGTCAAATCCATGTAA 58.239 40.909 0.00 0.00 0.00 2.41
5410 6758 1.406539 AGCTCCACACTTGCTTGTTTG 59.593 47.619 0.00 0.00 32.61 2.93
5786 7135 8.575649 AAGAGAAAACTTCTTTTACAGTGGAA 57.424 30.769 0.00 0.00 40.87 3.53
5904 7253 2.674852 AGTTAGCTGTGTGCATCAATCG 59.325 45.455 0.00 0.00 45.94 3.34
6044 7393 5.880054 AGTAGCGCACACTATTTTTCAAT 57.120 34.783 11.47 0.00 0.00 2.57
6082 7431 0.407528 AGTCTCTGCCCTCTGAGTGA 59.592 55.000 3.66 0.00 38.80 3.41
6263 7612 3.525800 AAATGGTTGGCAGGAGTTAGT 57.474 42.857 0.00 0.00 0.00 2.24
6522 7881 4.674362 CGATGTATTCTGAGACGGTGAACA 60.674 45.833 0.00 0.00 0.00 3.18
6809 8168 7.873505 AGGTGTGAGAAGTAACTCTTTAACATC 59.126 37.037 0.00 0.00 36.40 3.06
6902 8261 8.706492 TGTAAGGATGTTAGTGGTAATTTACG 57.294 34.615 0.64 0.00 0.00 3.18
7049 8408 6.928492 ACCCAACAATGTTGAATTAATCACAC 59.072 34.615 25.93 0.00 37.92 3.82
7278 8637 1.810151 ACCATGGTCAAAAATCCGACG 59.190 47.619 13.00 0.00 32.74 5.12
7282 8641 5.486526 TGCATTTACCATGGTCAAAAATCC 58.513 37.500 23.76 12.81 0.00 3.01
7290 8649 4.535526 AAACCTTGCATTTACCATGGTC 57.464 40.909 23.76 7.17 39.11 4.02
7330 8689 1.398390 GGAAACTGCCATCATCACGAC 59.602 52.381 0.00 0.00 0.00 4.34
7640 10289 2.037641 TGAGAAGATATGCGACCCCATG 59.962 50.000 0.00 0.00 0.00 3.66
7642 10291 1.788229 TGAGAAGATATGCGACCCCA 58.212 50.000 0.00 0.00 0.00 4.96
7643 10292 2.910688 TTGAGAAGATATGCGACCCC 57.089 50.000 0.00 0.00 0.00 4.95
7644 10293 3.070018 CCATTGAGAAGATATGCGACCC 58.930 50.000 0.00 0.00 0.00 4.46
7645 10294 3.070018 CCCATTGAGAAGATATGCGACC 58.930 50.000 0.00 0.00 0.00 4.79
7646 10295 2.481952 GCCCATTGAGAAGATATGCGAC 59.518 50.000 0.00 0.00 0.00 5.19
7647 10296 2.771089 GCCCATTGAGAAGATATGCGA 58.229 47.619 0.00 0.00 0.00 5.10
7648 10297 1.462283 CGCCCATTGAGAAGATATGCG 59.538 52.381 0.00 0.00 0.00 4.73
7649 10298 2.740981 CTCGCCCATTGAGAAGATATGC 59.259 50.000 0.00 0.00 35.43 3.14
7650 10299 3.332919 CCTCGCCCATTGAGAAGATATG 58.667 50.000 0.00 0.00 35.43 1.78
7651 10300 2.304180 CCCTCGCCCATTGAGAAGATAT 59.696 50.000 0.00 0.00 35.43 1.63
7652 10301 1.694150 CCCTCGCCCATTGAGAAGATA 59.306 52.381 0.00 0.00 35.43 1.98
7653 10302 0.471617 CCCTCGCCCATTGAGAAGAT 59.528 55.000 0.00 0.00 35.43 2.40
7654 10303 1.626356 CCCCTCGCCCATTGAGAAGA 61.626 60.000 0.00 0.00 35.43 2.87
7655 10304 1.153086 CCCCTCGCCCATTGAGAAG 60.153 63.158 0.00 0.00 35.43 2.85
7656 10305 1.497309 AACCCCTCGCCCATTGAGAA 61.497 55.000 0.00 0.00 35.43 2.87
7657 10306 1.923395 AACCCCTCGCCCATTGAGA 60.923 57.895 0.00 0.00 35.43 3.27
7658 10307 1.750399 CAACCCCTCGCCCATTGAG 60.750 63.158 0.00 0.00 0.00 3.02
7659 10308 1.570857 ATCAACCCCTCGCCCATTGA 61.571 55.000 0.00 0.00 34.03 2.57
7660 10309 1.076777 ATCAACCCCTCGCCCATTG 60.077 57.895 0.00 0.00 0.00 2.82
7661 10310 1.076777 CATCAACCCCTCGCCCATT 60.077 57.895 0.00 0.00 0.00 3.16
7662 10311 2.597340 CATCAACCCCTCGCCCAT 59.403 61.111 0.00 0.00 0.00 4.00
7663 10312 3.727258 CCATCAACCCCTCGCCCA 61.727 66.667 0.00 0.00 0.00 5.36
7664 10313 3.407967 TCCATCAACCCCTCGCCC 61.408 66.667 0.00 0.00 0.00 6.13
7665 10314 2.124695 GTCCATCAACCCCTCGCC 60.125 66.667 0.00 0.00 0.00 5.54
7666 10315 0.608035 TTTGTCCATCAACCCCTCGC 60.608 55.000 0.00 0.00 35.61 5.03
7667 10316 1.165270 GTTTGTCCATCAACCCCTCG 58.835 55.000 0.00 0.00 35.61 4.63
7668 10317 1.545841 GGTTTGTCCATCAACCCCTC 58.454 55.000 0.00 0.00 33.29 4.30
7669 10318 3.765968 GGTTTGTCCATCAACCCCT 57.234 52.632 0.00 0.00 33.29 4.79
7680 10329 2.741211 GCGTCCCTCGGGTTTGTC 60.741 66.667 1.18 0.00 40.26 3.18
7776 10425 4.874533 GGGAGGGGAGTACGGGGG 62.875 77.778 0.00 0.00 0.00 5.40
7823 10472 2.207924 GGACTGGTGGACCTCGTGT 61.208 63.158 0.00 0.00 36.82 4.49
7886 10535 6.667661 TGATGAATACAATCCACAATACCCA 58.332 36.000 0.00 0.00 0.00 4.51
7960 10609 1.002990 CAGGCAGCATGTCCAGACA 60.003 57.895 2.42 2.42 46.31 3.41
7964 10613 2.352422 GACCAGGCAGCATGTCCA 59.648 61.111 6.27 0.00 46.31 4.02
7971 10620 1.733526 AAAAACGTGACCAGGCAGC 59.266 52.632 0.00 0.00 0.00 5.25
8017 10666 1.609501 TCAACCCGGGAGTCTGAGG 60.610 63.158 32.02 6.81 0.00 3.86
8018 10667 1.185618 TGTCAACCCGGGAGTCTGAG 61.186 60.000 32.02 8.33 0.00 3.35
8019 10668 1.152419 TGTCAACCCGGGAGTCTGA 60.152 57.895 32.02 20.25 0.00 3.27
8020 10669 1.293498 CTGTCAACCCGGGAGTCTG 59.707 63.158 32.02 18.20 0.00 3.51
8021 10670 2.584391 GCTGTCAACCCGGGAGTCT 61.584 63.158 32.02 0.00 0.00 3.24
8022 10671 2.047179 GCTGTCAACCCGGGAGTC 60.047 66.667 32.02 17.15 0.00 3.36
8023 10672 1.990160 TTTGCTGTCAACCCGGGAGT 61.990 55.000 32.02 12.31 30.75 3.85
8024 10673 1.228124 TTTGCTGTCAACCCGGGAG 60.228 57.895 32.02 19.82 30.75 4.30
8025 10674 1.527380 GTTTGCTGTCAACCCGGGA 60.527 57.895 32.02 0.04 30.75 5.14
8050 10699 0.250901 ACATGAGGGGTGCTGTCAAC 60.251 55.000 0.00 0.00 0.00 3.18
8051 10700 0.036732 GACATGAGGGGTGCTGTCAA 59.963 55.000 0.00 0.00 38.28 3.18
8052 10701 1.679311 GACATGAGGGGTGCTGTCA 59.321 57.895 0.00 0.00 38.28 3.58
8053 10702 1.078143 GGACATGAGGGGTGCTGTC 60.078 63.158 0.00 0.00 37.79 3.51
8054 10703 1.426251 TTGGACATGAGGGGTGCTGT 61.426 55.000 0.00 0.00 0.00 4.40
8055 10704 0.962356 GTTGGACATGAGGGGTGCTG 60.962 60.000 0.00 0.00 0.00 4.41
8056 10705 1.380302 GTTGGACATGAGGGGTGCT 59.620 57.895 0.00 0.00 0.00 4.40
8057 10706 1.678970 GGTTGGACATGAGGGGTGC 60.679 63.158 0.00 0.00 0.00 5.01
8058 10707 1.000896 GGGTTGGACATGAGGGGTG 60.001 63.158 0.00 0.00 0.00 4.61
8059 10708 1.071314 TTGGGTTGGACATGAGGGGT 61.071 55.000 0.00 0.00 0.00 4.95
8060 10709 0.114168 TTTGGGTTGGACATGAGGGG 59.886 55.000 0.00 0.00 0.00 4.79
8061 10710 2.236489 ATTTGGGTTGGACATGAGGG 57.764 50.000 0.00 0.00 0.00 4.30
8062 10711 3.638160 CCATATTTGGGTTGGACATGAGG 59.362 47.826 0.00 0.00 39.56 3.86
8063 10712 3.068590 GCCATATTTGGGTTGGACATGAG 59.931 47.826 0.00 0.00 43.84 2.90
8064 10713 3.030291 GCCATATTTGGGTTGGACATGA 58.970 45.455 0.00 0.00 43.84 3.07
8065 10714 2.223782 CGCCATATTTGGGTTGGACATG 60.224 50.000 4.23 0.00 43.84 3.21
8066 10715 2.031120 CGCCATATTTGGGTTGGACAT 58.969 47.619 4.23 0.00 43.84 3.06
8067 10716 1.468985 CGCCATATTTGGGTTGGACA 58.531 50.000 4.23 0.00 43.84 4.02
8068 10717 0.102300 GCGCCATATTTGGGTTGGAC 59.898 55.000 0.00 0.00 43.84 4.02
8069 10718 1.380403 CGCGCCATATTTGGGTTGGA 61.380 55.000 0.00 0.00 43.84 3.53
8070 10719 1.065600 CGCGCCATATTTGGGTTGG 59.934 57.895 0.00 0.00 43.84 3.77
8071 10720 1.065600 CCGCGCCATATTTGGGTTG 59.934 57.895 0.00 0.00 43.84 3.77
8072 10721 0.467290 ATCCGCGCCATATTTGGGTT 60.467 50.000 0.00 0.00 43.84 4.11
8073 10722 0.398696 TATCCGCGCCATATTTGGGT 59.601 50.000 0.00 0.00 43.84 4.51
8074 10723 1.401552 CATATCCGCGCCATATTTGGG 59.598 52.381 0.00 0.00 43.84 4.12
8075 10724 1.401552 CCATATCCGCGCCATATTTGG 59.598 52.381 0.00 4.17 46.66 3.28
8076 10725 1.401552 CCCATATCCGCGCCATATTTG 59.598 52.381 0.00 0.00 0.00 2.32
8077 10726 1.681780 CCCCATATCCGCGCCATATTT 60.682 52.381 0.00 0.00 0.00 1.40
8078 10727 0.107214 CCCCATATCCGCGCCATATT 60.107 55.000 0.00 0.00 0.00 1.28
8079 10728 1.526887 CCCCATATCCGCGCCATAT 59.473 57.895 0.00 1.34 0.00 1.78
8119 10768 2.864471 AACGTGGACTGGGACCGAC 61.864 63.158 0.00 0.00 0.00 4.79
8121 10770 2.357034 CAACGTGGACTGGGACCG 60.357 66.667 0.00 0.00 0.00 4.79
8153 10802 5.041191 AGCGGATGAAGAGGAATTTATGT 57.959 39.130 0.00 0.00 0.00 2.29
8178 10827 0.900421 GTGGCTAGGGTTTAGTCCGT 59.100 55.000 0.00 0.00 0.00 4.69
8208 10857 3.876589 GACGAGCTTGGGTGGCGAA 62.877 63.158 5.79 0.00 34.52 4.70
8233 10884 1.226435 GGACACGAGCTAGCTCACG 60.226 63.158 36.92 29.46 42.86 4.35
8259 10910 2.571757 CGCCGACAAGGTAGAGCA 59.428 61.111 0.00 0.00 43.70 4.26
8260 10911 2.202756 CCGCCGACAAGGTAGAGC 60.203 66.667 0.00 0.00 43.70 4.09
8312 10964 2.034532 CTGCAGTGGCCATGTCCA 59.965 61.111 9.72 3.26 40.13 4.02
8343 10995 3.447025 CTCACCCGATTCCGCTCCC 62.447 68.421 0.00 0.00 0.00 4.30
8353 11005 2.361992 TAAGCCGAGCTCACCCGA 60.362 61.111 15.40 0.00 38.25 5.14
8365 11017 2.973945 ACGTGAAACCAGATCTAAGCC 58.026 47.619 0.00 0.00 0.00 4.35
8441 11107 3.124921 CGGACAATGACCGGCCAC 61.125 66.667 15.88 0.00 45.65 5.01
8448 11114 2.095843 GCGTTCGCGGACAATGAC 59.904 61.111 19.39 0.00 41.67 3.06
8499 11165 1.523758 ACAGTCGGACTTGGCAAATC 58.476 50.000 8.18 0.00 0.00 2.17
8520 11186 2.921754 GGTGTACGTGTGTAAGAGCATC 59.078 50.000 0.00 0.00 30.94 3.91
8560 11226 1.588667 CCGCTTGTTGGTTGCACAC 60.589 57.895 0.00 0.00 0.00 3.82
8563 11229 2.804167 CACCGCTTGTTGGTTGCA 59.196 55.556 0.00 0.00 37.72 4.08
8587 11253 2.457598 AGCTAATCTTGGTCACTCCGA 58.542 47.619 0.00 0.00 39.52 4.55
8669 11335 8.940952 GCATTGAGAAGATAGAAGTACACTTTT 58.059 33.333 0.00 0.00 36.11 2.27
8670 11336 8.097038 TGCATTGAGAAGATAGAAGTACACTTT 58.903 33.333 0.00 0.00 36.11 2.66
8671 11337 7.615403 TGCATTGAGAAGATAGAAGTACACTT 58.385 34.615 0.00 0.00 39.23 3.16
8672 11338 7.175347 TGCATTGAGAAGATAGAAGTACACT 57.825 36.000 0.00 0.00 0.00 3.55
8673 11339 8.430801 AATGCATTGAGAAGATAGAAGTACAC 57.569 34.615 12.09 0.00 0.00 2.90
8674 11340 9.453572 AAAATGCATTGAGAAGATAGAAGTACA 57.546 29.630 13.82 0.00 0.00 2.90
8739 11405 4.338118 GGTGTCAAATGTTCTTGGTCTTGA 59.662 41.667 0.00 0.00 0.00 3.02
8806 11472 7.474079 GCCACCATCTCTCTCCTCTTTAATTAT 60.474 40.741 0.00 0.00 0.00 1.28
8834 11500 0.954452 GTGGGAGCAACACTGGAAAG 59.046 55.000 0.00 0.00 35.98 2.62
8844 11510 2.435372 AGAAAACACAGTGGGAGCAA 57.565 45.000 0.00 0.00 0.00 3.91
8845 11511 2.435372 AAGAAAACACAGTGGGAGCA 57.565 45.000 0.00 0.00 0.00 4.26
8846 11512 6.569179 TTTATAAGAAAACACAGTGGGAGC 57.431 37.500 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.